BLASTX nr result
ID: Forsythia23_contig00019918
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia23_contig00019918
(1424 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_012849888.1| PREDICTED: retrovirus-related Pol polyprotei... 223 2e-97
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera] 210 1e-94
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis] 201 2e-91
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera] 197 9e-88
gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Ar... 192 3e-81
emb|CAA31653.1| polyprotein [Arabidopsis thaliana] 189 7e-80
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera] 197 4e-79
emb|CAA20201.1| putative transposable element [Arabidopsis thali... 196 3e-78
gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsi... 189 1e-77
pir||S23319 hypothetical protein 2 - Arabidopsis thaliana retrot... 177 2e-76
gb|AAK38381.1|AC079028_5 polyprotein, putative [Arabidopsis thal... 183 8e-74
dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsi... 181 4e-65
ref|XP_009107606.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 191 6e-64
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 192 2e-62
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g... 192 2e-62
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 193 1e-61
gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsi... 182 2e-61
gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Ja... 188 3e-61
emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa Indica Group] 185 4e-61
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 186 4e-60
>ref|XP_012849888.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 [Erythranthe guttatus]
Length = 598
Score = 223 bits (569), Expect(4) = 2e-97
Identities = 109/179 (60%), Positives = 137/179 (76%), Gaps = 3/179 (1%)
Frame = +2
Query: 287 FLSLIDDFSRKVWIFLLKQKSDTFERFKTWKTLIENQT*KKIKVLRTDNGLEFSNSDFSH 466
FLS+IDD+SRKV++FLLKQKSD F++FKTWKTLIENQT K+IK LRTDNG+EF N +F +
Sbjct: 228 FLSIIDDYSRKVFVFLLKQKSDVFDKFKTWKTLIENQTGKRIKTLRTDNGIEFCNLEFDN 287
Query: 467 LCDESGILRYKTVPYTFQQNGVAERMNMTLLDKV---MVSSGLP*VLWGEVVMTASYIVN 637
LC SGI R+K+V +T QQNGVAERMN TLL++V + SSGLP + WGE ++TA+Y++N
Sbjct: 288 LCANSGIRRHKSVVHTPQQNGVAERMNRTLLERVRSMLTSSGLPKLFWGEAILTATYLIN 347
Query: 638 RTPFSALDGKTPEQQWSGKLPDFSHLRTFGYAAYSDQSIGKLEARAQKCVFL*YPDGLK 814
R+P L+G PE W GK D S+L FGYAA+ KLE R KC+FL YPDG+K
Sbjct: 348 RSPSMPLNGDLPESVWCGKKVDLSNLHVFGYAAFVHHKGDKLEPRFVKCIFLGYPDGVK 406
Score = 70.5 bits (171), Expect(4) = 2e-97
Identities = 36/86 (41%), Positives = 50/86 (58%), Gaps = 4/86 (4%)
Frame = +1
Query: 43 WHTKLAHVSEKGLHILQKQGFFFFFCKNVISKVPCCEHCTIGKHHRLHF----SIGGHKT 210
WH L H+S K L IL K +F + +S V C+ C +GK + F S +
Sbjct: 146 WHKGLGHMSNKWLSILHKNQYFG---NDKVSSVTLCDSCILGKQTHVLFPEYPSPNLSRC 202
Query: 211 TSVLEYINSDLWGPSSVSTQGGNKYF 288
T +LEYI++D+WGP+SV T GGN+YF
Sbjct: 203 TEILEYIHADVWGPTSVPTYGGNRYF 228
Score = 68.2 bits (165), Expect(4) = 2e-97
Identities = 33/77 (42%), Positives = 46/77 (59%)
Frame = +3
Query: 1194 YQDLMFKEPKTYSEAVNGQNVDNWYCAIKEEIESLKRNNTWILVPKPKSKSLVDCKWIFK 1373
++ L EPK+Y +A+ W ++ +E+ SL N TW LVPKP + S+VDC W+FK
Sbjct: 517 FESLDGNEPKSYKDALKSDKSTEWLNSMNDEMNSLHVNQTWELVPKPVNCSVVDCNWLFK 576
Query: 1374 VKEGVSDIKKPLKFKAR 1424
VK V I K+KAR
Sbjct: 577 VKNEVDSI----KYKAR 589
Score = 66.2 bits (160), Expect(4) = 2e-97
Identities = 49/119 (41%), Positives = 63/119 (52%), Gaps = 3/119 (2%)
Frame = +1
Query: 808 VKVYRLWAKGINGFKIITSRDVTFN*SEMPCLIDKNLKESEIDHSIKLQVEFTTPTEGIN 987
VK YRLW KG G+KII SRDV FN S PCL N + + +TP E +
Sbjct: 405 VKGYRLWLKGDFGYKIIISRDVIFNESGFPCLAVPN-----------VVIPQSTPNE-VE 452
Query: 988 QIQVELE--SEVKFDHNVQDSVDVEHQEVDDVAQETHHPDLEDYQLARDRTRRD-IRAP 1155
Q+ ++ + S+ + N+QD VE VD DL DYQLARDR RR+ +R P
Sbjct: 453 QLPIKSDDVSDSELSENLQDQT-VELPNVD---------DLSDYQLARDRPRREHVRKP 501
>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
Length = 1208
Score = 210 bits (534), Expect(4) = 1e-94
Identities = 101/179 (56%), Positives = 132/179 (73%), Gaps = 3/179 (1%)
Frame = +2
Query: 287 FLSLIDDFSRKVWIFLLKQKSDTFERFKTWKTLIENQT*KKIKVLRTDNGLEFSNSDFSH 466
FL+LIDD+SRKVWI+ LK KS+TF +FK WK L+E QT +K+K LRTDNGLEF ++DF+
Sbjct: 472 FLTLIDDYSRKVWIYFLKNKSETFLKFKEWKILVETQTSRKVKKLRTDNGLEFLSNDFNS 531
Query: 467 LCDESGILRYKTVPYTFQQNGVAERMNMTLLDKV---MVSSGLP*VLWGEVVMTASYIVN 637
LC + GI R++TV YT QQNG+AERMN T+L++V + SSGL V W E TA +++N
Sbjct: 532 LCQKEGIARHRTVRYTPQQNGLAERMNRTILERVRCMLSSSGLSKVFWAEAAETAVHLIN 591
Query: 638 RTPFSALDGKTPEQQWSGKLPDFSHLRTFGYAAYSDQSIGKLEARAQKCVFL*YPDGLK 814
R+P SAL KTP+++W+GK D+ HL+ FG AY KLE RA KC+FL YP G+K
Sbjct: 592 RSPSSALQFKTPQEKWTGKAADYQHLKVFGCTAYVHTKTDKLEPRAVKCIFLGYPKGVK 650
Score = 80.9 bits (198), Expect(4) = 1e-94
Identities = 37/82 (45%), Positives = 53/82 (64%)
Frame = +1
Query: 43 WHTKLAHVSEKGLHILQKQGFFFFFCKNVISKVPCCEHCTIGKHHRLHFSIGGHKTTSVL 222
WH +L H+S +GL L+KQG + ++ +P CEHC GK R+ F+ H+T + L
Sbjct: 394 WHQRLGHISHRGLQELEKQGVLGNY---KLTDLPFCEHCVFGKATRVKFAKAIHETQNQL 450
Query: 223 EYINSDLWGPSSVSTQGGNKYF 288
+YI+SDLWGPS V + GG +YF
Sbjct: 451 DYIHSDLWGPSRVPSIGGARYF 472
Score = 79.3 bits (194), Expect(4) = 1e-94
Identities = 38/91 (41%), Positives = 58/91 (63%), Gaps = 2/91 (2%)
Frame = +3
Query: 1158 RFG--DYVSLAAMSYQDLMFKEPKTYSEAVNGQNVDNWYCAIKEEIESLKRNNTWILVPK 1331
R+G + + A ++++ EPKTY EA+N D W AI+EE++SL++N TW LV K
Sbjct: 749 RYGQAEMTAFALSVAEEIVDMEPKTYQEAINSNEADQWVKAIQEEMDSLRKNETWELVTK 808
Query: 1332 PKSKSLVDCKWIFKVKEGVSDIKKPLKFKAR 1424
PK + +V KW+FK K+G + P ++KAR
Sbjct: 809 PKDRKVVGSKWVFKRKQGTLGNEAP-RYKAR 838
Score = 48.5 bits (114), Expect(4) = 1e-94
Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 1/117 (0%)
Frame = +1
Query: 808 VKVYRLWAKGINGFKIITSRDVTFN*SEMPCLIDKNLKESEIDHSIKLQVEFTTPTEGIN 987
VK Y+LW + K I SRDVTFN +M K ++ EG++
Sbjct: 649 VKGYKLWIETQGKGKCIISRDVTFNEQDM----SKQTPAKDV--------------EGLD 690
Query: 988 QIQVELESE-VKFDHNVQDSVDVEHQEVDDVAQETHHPDLEDYQLARDRTRRDIRAP 1155
Q+Q E+E E ++ + + + S +E+ Q LE Y L RDR +R ++ P
Sbjct: 691 QLQFEVEHETLQPEKSKETSSKTAQEEIVHERQNEPTQGLESYNLVRDRQKRQVKPP 747
>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
Length = 1334
Score = 201 bits (510), Expect(4) = 2e-91
Identities = 101/179 (56%), Positives = 131/179 (73%), Gaps = 3/179 (1%)
Frame = +2
Query: 287 FLSLIDDFSRKVWIFLLKQKSDTFERFKTWKTLIENQT*KKIKVLRTDNGLEFSNSDFSH 466
F+SLIDD+SRKVWI++LK K E+FK WK+L+ENQ+ K+K LRTDNGLEF + F
Sbjct: 504 FMSLIDDYSRKVWIYILKIKDQALEKFKVWKSLVENQSDFKLKCLRTDNGLEFCSKVFEE 563
Query: 467 LCDESGILRYKTVPYTFQQNGVAERMNMTLLDK---VMVSSGLP*VLWGEVVMTASYIVN 637
C + GI R+KTV +T QQNG+AERMN TL+DK ++++S LP W E V TASY+VN
Sbjct: 564 YCQKHGIKRHKTVRFTPQQNGLAERMNRTLVDKTRCMLINSKLPRSFWAEAVNTASYLVN 623
Query: 638 RTPFSALDGKTPEQQWSGKLPDFSHLRTFGYAAYSDQSIGKLEARAQKCVFL*YPDGLK 814
R+P SA+ KTPE+ W+GK ++ +LR FG AY + GKLEARA K VF+ YPDG+K
Sbjct: 624 RSPSSAIGFKTPEELWNGKPANYQNLRVFGCPAYLHINQGKLEARALKGVFVGYPDGVK 682
Score = 87.8 bits (216), Expect(4) = 2e-91
Identities = 37/88 (42%), Positives = 60/88 (68%)
Frame = +3
Query: 1161 FGDYVSLAAMSYQDLMFKEPKTYSEAVNGQNVDNWYCAIKEEIESLKRNNTWILVPKPKS 1340
+ D ++ A + ++ +EP +SEA+ + D W A+++E+ESL+RN TW L+P P +
Sbjct: 795 YADLIAYALLCADEVTIEEPANFSEAMESVHCDKWLEAMQDEMESLQRNQTWTLIPNPGN 854
Query: 1341 KSLVDCKWIFKVKEGVSDIKKPLKFKAR 1424
K L++CKWIFK EG+ D++ P K+KAR
Sbjct: 855 KRLINCKWIFKRNEGIPDVEPP-KYKAR 881
Score = 70.9 bits (172), Expect(4) = 2e-91
Identities = 34/82 (41%), Positives = 47/82 (57%)
Frame = +1
Query: 43 WHTKLAHVSEKGLHILQKQGFFFFFCKNVISKVPCCEHCTIGKHHRLHFSIGGHKTTSVL 222
WH +L H+S KGL L KQG + I ++ CE+C GK HR F+ G H + VL
Sbjct: 426 WHLRLGHMSIKGLQELSKQGLLG---GDRIQQLEFCENCIFGKSHRSKFNKGEHMSKQVL 482
Query: 223 EYINSDLWGPSSVSTQGGNKYF 288
+Y + D WGP+ V + G +YF
Sbjct: 483 DYAHIDHWGPAQVPSLSGGRYF 504
Score = 48.5 bits (114), Expect(4) = 2e-91
Identities = 45/125 (36%), Positives = 60/125 (48%), Gaps = 9/125 (7%)
Frame = +1
Query: 808 VKVYRLWAKGINGFKIITSRDVTFN*SEMPCLIDKNLKESEIDHSIKLQVEFTTPTEG-- 981
VK Y++W K K I SRDV F+ S + LKES +H LQ
Sbjct: 681 VKGYKIWCKDQG--KCIVSRDVVFHESVL-------LKESA-EHDAGLQDNPAANKRSGS 730
Query: 982 -INQIQVEL------ESEVKFDHNVQDSVDVEHQEVDDVAQETHHPDLEDYQLARDRTRR 1140
+++ VEL E E D + EH EV ++ Q DL++YQLARDR RR
Sbjct: 731 ETSKVNVELLTDKSSEKEAASDDERATAESEEH-EVSELPQA----DLQNYQLARDRVRR 785
Query: 1141 DIRAP 1155
++RAP
Sbjct: 786 EVRAP 790
>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
Length = 1643
Score = 197 bits (502), Expect(4) = 9e-88
Identities = 94/179 (52%), Positives = 128/179 (71%), Gaps = 3/179 (1%)
Frame = +2
Query: 287 FLSLIDDFSRKVWIFLLKQKSDTFERFKTWKTLIENQT*KKIKVLRTDNGLEFSNSDFSH 466
+++ IDDFSRKVW++ LK K + F +FK WKT++E +T K +K LRTDNGLEF N DF
Sbjct: 826 YVTFIDDFSRKVWVYFLKAKDEVFGKFKEWKTMVEKRTGKVVKTLRTDNGLEFCNKDFDE 885
Query: 467 LCDESGILRYKTVPYTFQQNGVAERMNMTLLDK---VMVSSGLP*VLWGEVVMTASYIVN 637
C + GI+R++TV +T QQNGVAERMN TL+ + + + +GL W E V TA+Y+VN
Sbjct: 886 FCRKEGIVRHRTVRHTPQQNGVAERMNQTLVQRARCMRIDAGLSKKFWAEAVNTAAYLVN 945
Query: 638 RTPFSALDGKTPEQQWSGKLPDFSHLRTFGYAAYSDQSIGKLEARAQKCVFL*YPDGLK 814
R+P +A+D KTP++ WSGK ++S L+ FG AY+ S GKLE RA KC+FL Y G+K
Sbjct: 946 RSPSTAIDFKTPQEVWSGKPSNYSGLKIFGCPAYAHVSDGKLEPRAMKCIFLGYATGVK 1004
Score = 87.0 bits (214), Expect(4) = 9e-88
Identities = 41/82 (50%), Positives = 51/82 (62%)
Frame = +1
Query: 43 WHTKLAHVSEKGLHILQKQGFFFFFCKNVISKVPCCEHCTIGKHHRLHFSIGGHKTTSVL 222
WH +L H+SEKGL IL KQG K+ CE C +GK R+ FS+G H T VL
Sbjct: 748 WHRRLGHMSEKGLSILSKQGLL---SGAETGKLKFCETCVMGKQRRVKFSMGSHTTNGVL 804
Query: 223 EYINSDLWGPSSVSTQGGNKYF 288
EYI+SDLWGPS V + G +Y+
Sbjct: 805 EYIHSDLWGPSPVESHSGCRYY 826
Score = 75.1 bits (183), Expect(4) = 9e-88
Identities = 32/84 (38%), Positives = 57/84 (67%)
Frame = +3
Query: 1173 VSLAAMSYQDLMFKEPKTYSEAVNGQNVDNWYCAIKEEIESLKRNNTWILVPKPKSKSLV 1352
V+ A +++ +EP++Y EA+ ++ W ++ +E+ SL++N TW LVP P+ V
Sbjct: 1112 VAFALAVAEEIGREEPRSYKEAMESKDSKKWLSSMDDEMASLRKNQTWELVPLPEGVKPV 1171
Query: 1353 DCKWIFKVKEGVSDIKKPLKFKAR 1424
DCKW+FK+K+G+S+ +P K+K+R
Sbjct: 1172 DCKWLFKIKDGISE-DEPPKYKSR 1194
Score = 36.2 bits (82), Expect(4) = 9e-88
Identities = 37/117 (31%), Positives = 52/117 (44%), Gaps = 1/117 (0%)
Frame = +1
Query: 808 VKVYRLWAKGINGFKIITSRDVTFN*SEMPCLIDKNLKESEIDHSIKLQVEFTTPTEGIN 987
VK YRLW K I SRDVTF+ S M + + ++ + K + G N
Sbjct: 1003 VKGYRLWCTEDRTPKFIISRDVTFDESAM---FGQRKEFGDLAGTSKTDL-------GAN 1052
Query: 988 QIQVELESEVKFDHNVQDSVDVEHQEVDDVAQETHHPDLEDYQ-LARDRTRRDIRAP 1155
Q +VE E + ++ VDD ++E D D Q +A R RR+IR P
Sbjct: 1053 Q-KVEFEVDAPMENG-----------VDDTSEEQPVIDQNDSQSIAAXRPRREIRRP 1097
>gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Arabidopsis thaliana]
Length = 1356
Score = 192 bits (489), Expect(4) = 3e-81
Identities = 95/179 (53%), Positives = 122/179 (68%), Gaps = 3/179 (1%)
Frame = +2
Query: 287 FLSLIDDFSRKVWIFLLKQKSDTFERFKTWKTLIENQT*KKIKVLRTDNGLEFSNSDFSH 466
FLS+IDD +RKVW++ LK K +TF++F WK+L+ENQ KK+K LRTDNGLEF NS F
Sbjct: 519 FLSIIDDKTRKVWLYFLKSKDETFDKFCEWKSLVENQVNKKVKCLRTDNGLEFCNSRFDS 578
Query: 467 LCDESGILRYKTVPYTFQQNGVAERMNMTLLDKV---MVSSGLP*VLWGEVVMTASYIVN 637
C E GI R++T YT QQNGVAERMN T+++KV + SG+ V W E TA+Y++N
Sbjct: 579 YCKEHGIERHRTCTYTPQQNGVAERMNRTIMEKVRCLLNKSGVEEVFWAEAAATAAYLIN 638
Query: 638 RTPFSALDGKTPEQQWSGKLPDFSHLRTFGYAAYSDQSIGKLEARAQKCVFL*YPDGLK 814
R+P SA++ PE+ W + P + HLR FG AY Q GKL+ RA K FL YP G K
Sbjct: 639 RSPASAINHNVPEEMWLNRKPGYKHLRKFGSIAYVHQDQGKLKPRALKGFFLGYPAGTK 697
Score = 78.6 bits (192), Expect(4) = 3e-81
Identities = 32/84 (38%), Positives = 57/84 (67%)
Frame = +3
Query: 1173 VSLAAMSYQDLMFKEPKTYSEAVNGQNVDNWYCAIKEEIESLKRNNTWILVPKPKSKSLV 1352
V+ A + ++ + +EP++Y EA+ Q+ + W A +E++SL +N TW LV KPK + ++
Sbjct: 824 VTFALVVVENCIVQEPQSYQEAMESQDCEKWDMATHDEMDSLMKNGTWDLVDKPKDRKII 883
Query: 1353 DCKWIFKVKEGVSDIKKPLKFKAR 1424
C+W+FK+K G+ + +P +FKAR
Sbjct: 884 GCRWLFKLKSGIPGV-EPTRFKAR 906
Score = 64.7 bits (156), Expect(4) = 3e-81
Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Frame = +1
Query: 43 WHTKLAHVSEKGLHILQKQGFFFFFCKNVISKVPCCEHCTIGKHHRLHFSIGGHKTTSVL 222
WH++L H+S L +L +G + I+++ CEHC +GK ++ F++G H + L
Sbjct: 440 WHSRLGHMSMNNLKVLAGKGLID---RKEINELEFCEHCVMGKSKKVSFNVGKHTSEDAL 496
Query: 223 EYINSDLWG-PSSVSTQGGNKYF 288
Y+++DLWG P+ + G +YF
Sbjct: 497 SYVHADLWGSPNVTPSISGKQYF 519
Score = 38.1 bits (87), Expect(4) = 3e-81
Identities = 38/122 (31%), Positives = 54/122 (44%), Gaps = 7/122 (5%)
Frame = +1
Query: 811 KVYRLWAKGINGFKIITSRDVTFN*S----EMPCLIDK--NLKESEIDHSIKLQVEFTTP 972
K Y++W + K + SR+V F S ++ D NL + E S Q +F
Sbjct: 697 KGYKVWL--LEEEKCVISRNVVFQESVVYRDLKVKEDDTDNLNQKETTSSEVEQNKFAEA 754
Query: 973 TEGINQIQVELESEVKFDHNVQDSVDVEHQEVDDVAQET-HHPDLEDYQLARDRTRRDIR 1149
+ IQ++ +SE Q S E E + QET L Y+LARDR RR+I
Sbjct: 755 SGSGGVIQLQSDSE-PITEGEQSSDSEEEVEYSEKTQETPKRTGLTTYKLARDRVRRNIN 813
Query: 1150 AP 1155
P
Sbjct: 814 PP 815
>emb|CAA31653.1| polyprotein [Arabidopsis thaliana]
Length = 1291
Score = 189 bits (479), Expect(4) = 7e-80
Identities = 95/179 (53%), Positives = 119/179 (66%), Gaps = 3/179 (1%)
Frame = +2
Query: 287 FLSLIDDFSRKVWIFLLKQKSDTFERFKTWKTLIENQT*KKIKVLRTDNGLEFSNSDFSH 466
FLS+IDD +RKVW++ L+ K +TF+RF WK L+ENQ KK+K LRTDNGLEF N F
Sbjct: 529 FLSIIDDKTRKVWLYFLRSKDETFDRFCEWKELVENQQNKKVKCLRTDNGLEFCNLKFDA 588
Query: 467 LCDESGILRYKTVPYTFQQNGVAERMNMTLLDKV---MVSSGLP*VLWGEVVMTASYIVN 637
C E GI R+KT YT QQNGVAERMN T+++KV + SGL W E TA+Y++N
Sbjct: 589 YCKEHGIERHKTCTYTPQQNGVAERMNRTIMEKVRCMLNESGLGEEFWAEAAATAAYLIN 648
Query: 638 RTPFSALDGKTPEQQWSGKLPDFSHLRTFGYAAYSDQSIGKLEARAQKCVFL*YPDGLK 814
R+P SA+D PE+ W K P + HLR FG AY GKL+ RA K +F+ YP G K
Sbjct: 649 RSPASAIDHNVPEELWLNKKPGYKHLRRFGSIAYVHIDQGKLKPRALKGIFIGYPAGTK 707
Score = 74.3 bits (181), Expect(4) = 7e-80
Identities = 30/84 (35%), Positives = 57/84 (67%)
Frame = +3
Query: 1173 VSLAAMSYQDLMFKEPKTYSEAVNGQNVDNWYCAIKEEIESLKRNNTWILVPKPKSKSLV 1352
V+ A ++ + L +EP++Y EA + + W A EE++SL +N TW+LV KP+++ ++
Sbjct: 831 VAFALVTVETLSMEEPQSYQEATSDKEWKKWKLATHEEMDSLIKNGTWVLVDKPQNRKII 890
Query: 1353 DCKWIFKVKEGVSDIKKPLKFKAR 1424
C+W+FK+K G + +P+++KA+
Sbjct: 891 GCRWLFKLKSGSPGV-EPVRYKAQ 913
Score = 65.9 bits (159), Expect(4) = 7e-80
Identities = 29/83 (34%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Frame = +1
Query: 43 WHTKLAHVSEKGLHILQKQGFFFFFCKNVISKVPCCEHCTIGKHHRLHFSIGGHKTTSVL 222
WH++L H+ + +L +G K I + CE+C +GK ++ F++G H + VL
Sbjct: 450 WHSRLGHIGLNNMKVLAGKGLV---SKEEIRVLDFCENCVMGKAKKVSFNVGKHNSEDVL 506
Query: 223 EYINSDLWGPSSVS-TQGGNKYF 288
Y+++DLWG ++V+ + GNKYF
Sbjct: 507 RYVHADLWGSTNVTPSLSGNKYF 529
Score = 40.4 bits (93), Expect(4) = 7e-80
Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 5/120 (4%)
Frame = +1
Query: 811 KVYRLWAKGINGFKIITSRDVTFN*SEM--PCLIDKNLKESEID---HSIKLQVEFTTPT 975
K Y++W + K + SR+V F+ + + + + ESE + HS ++ TP
Sbjct: 707 KGYKIWL--LEEHKCVISRNVLFHEESVYKDTMKKERVVESEAEPASHSKSTLIKVKTPG 764
Query: 976 EGINQIQVELESEVKFDHNVQDSVDVEHQEVDDVAQETHHPDLEDYQLARDRTRRDIRAP 1155
+ +++ E + D +V++ + E Q Q T L +YQLARDR RR I P
Sbjct: 765 NLNSGEVIQVSDEEESDESVEEEQEPETQVELPETQTTS--SLANYQLARDRERRQIHPP 822
>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
Length = 1562
Score = 197 bits (502), Expect(4) = 4e-79
Identities = 94/179 (52%), Positives = 128/179 (71%), Gaps = 3/179 (1%)
Frame = +2
Query: 287 FLSLIDDFSRKVWIFLLKQKSDTFERFKTWKTLIENQT*KKIKVLRTDNGLEFSNSDFSH 466
+++ IDDFSRKVW++ LK K + F +FK WKT++E +T K +K LRTDNGLEF N DF
Sbjct: 613 YVTFIDDFSRKVWVYFLKAKDEVFGKFKEWKTMVEKRTGKVVKTLRTDNGLEFCNKDFDE 672
Query: 467 LCDESGILRYKTVPYTFQQNGVAERMNMTLLDK---VMVSSGLP*VLWGEVVMTASYIVN 637
C + GI+R++TV +T QQNGVAERMN TL+ + + + +GL W E V TA+Y+VN
Sbjct: 673 FCRKEGIVRHRTVRHTPQQNGVAERMNQTLVQRARCMRIDAGLSKKFWAEAVNTAAYLVN 732
Query: 638 RTPFSALDGKTPEQQWSGKLPDFSHLRTFGYAAYSDQSIGKLEARAQKCVFL*YPDGLK 814
R+P +A+D KTP++ WSGK ++S L+ FG AY+ S GKLE RA KC+FL Y G+K
Sbjct: 733 RSPSTAIDFKTPQEVWSGKPSNYSGLKIFGCPAYAHVSDGKLEPRAMKCIFLGYATGVK 791
Score = 73.9 bits (180), Expect(4) = 4e-79
Identities = 32/84 (38%), Positives = 56/84 (66%)
Frame = +3
Query: 1173 VSLAAMSYQDLMFKEPKTYSEAVNGQNVDNWYCAIKEEIESLKRNNTWILVPKPKSKSLV 1352
V+ A +++ +EP++Y EA+ ++ W ++ +E+ SL++N TW LVP P+ V
Sbjct: 899 VAFALAVAEEIGREEPRSYKEAMESKDSKKWLSSMDDEMASLRKNQTWELVPLPEGVKPV 958
Query: 1353 DCKWIFKVKEGVSDIKKPLKFKAR 1424
DCKW+FK+K+G+S +P K+K+R
Sbjct: 959 DCKWLFKIKDGIS-XDEPPKYKSR 981
Score = 58.9 bits (141), Expect(4) = 4e-79
Identities = 31/82 (37%), Positives = 40/82 (48%)
Frame = +1
Query: 43 WHTKLAHVSEKGLHILQKQGFFFFFCKNVISKVPCCEHCTIGKHHRLHFSIGGHKTTSVL 222
WH +L H+SEKGL IL+ + FS+G H T VL
Sbjct: 561 WHRRLGHMSEKGLSILE-----------------------------VKFSMGSHTTNGVL 591
Query: 223 EYINSDLWGPSSVSTQGGNKYF 288
EYI+SDLWGPS V + G +Y+
Sbjct: 592 EYIHSDLWGPSPVESHSGCRYY 613
Score = 36.2 bits (82), Expect(4) = 4e-79
Identities = 37/117 (31%), Positives = 52/117 (44%), Gaps = 1/117 (0%)
Frame = +1
Query: 808 VKVYRLWAKGINGFKIITSRDVTFN*SEMPCLIDKNLKESEIDHSIKLQVEFTTPTEGIN 987
VK YRLW K I SRDVTF+ S M + + ++ + K + G N
Sbjct: 790 VKGYRLWCTEDRTPKFIISRDVTFDESAM---FGQRKEFGDLAGTSKTDL-------GAN 839
Query: 988 QIQVELESEVKFDHNVQDSVDVEHQEVDDVAQETHHPDLEDYQ-LARDRTRRDIRAP 1155
Q +VE E + ++ VDD ++E D D Q +A R RR+IR P
Sbjct: 840 Q-KVEFEVDAPMENG-----------VDDTSEEQPVIDQNDSQSIAAHRPRREIRRP 884
>emb|CAA20201.1| putative transposable element [Arabidopsis thaliana]
gi|7268932|emb|CAB79135.1| putative transposable element
[Arabidopsis thaliana]
Length = 1308
Score = 196 bits (498), Expect(4) = 3e-78
Identities = 100/179 (55%), Positives = 121/179 (67%), Gaps = 3/179 (1%)
Frame = +2
Query: 287 FLSLIDDFSRKVWIFLLKQKSDTFERFKTWKTLIENQT*KKIKVLRTDNGLEFSNSDFSH 466
FLS+IDD SRKVW+ LK K +TFERF WK L+ENQ KK+K+LRTDNGLEF N F
Sbjct: 510 FLSIIDDKSRKVWLMFLKTKDETFERFCEWKELVENQVNKKVKILRTDNGLEFCNLKFDE 569
Query: 467 LCDESGILRYKTVPYTFQQNGVAERMNMTLLDKV---MVSSGLP*VLWGEVVMTASYIVN 637
C ++GI R++T YT QQNGVA+RMN TL++KV + SGL V W E TA+Y+VN
Sbjct: 570 FCKQNGIERHRTCTYTPQQNGVAKRMNRTLMEKVRCLLNESGLEEVFWAEAAATAAYLVN 629
Query: 638 RTPFSALDGKTPEQQWSGKLPDFSHLRTFGYAAYSDQSIGKLEARAQKCVFL*YPDGLK 814
R+P SA+D PE+ W K P + HLR FG AY GKL+ RA K VFL YP G K
Sbjct: 630 RSPASAVDHNVPEELWLDKKPGYKHLRRFGCIAYVHLDQGKLKPRALKGVFLGYPQGTK 688
Score = 65.5 bits (158), Expect(4) = 3e-78
Identities = 30/91 (32%), Positives = 56/91 (61%), Gaps = 2/91 (2%)
Frame = +3
Query: 1158 RFGDYV--SLAAMSYQDLMFKEPKTYSEAVNGQNVDNWYCAIKEEIESLKRNNTWILVPK 1331
+ DY +LA + +++ +EP+ Y +A ++ W +KEEI+SL +N TW +V
Sbjct: 798 KLADYTHFALALVMAEEIESEEPQCYHDAKKDKHWIKWNGGMKEEIDSLLKNGTWDIVEW 857
Query: 1332 PKSKSLVDCKWIFKVKEGVSDIKKPLKFKAR 1424
PK + ++ C+W+FK+K G+ ++ ++KAR
Sbjct: 858 PKEQKVISCRWLFKLKPGIPGVEAQ-RYKAR 887
Score = 60.8 bits (146), Expect(4) = 3e-78
Identities = 28/69 (40%), Positives = 42/69 (60%)
Frame = +1
Query: 43 WHTKLAHVSEKGLHILQKQGFFFFFCKNVISKVPCCEHCTIGKHHRLHFSIGGHKTTSVL 222
WH +L H+S + IL ++G K I ++ CE+C +GK +L F++G H T VL
Sbjct: 441 WHCRLGHMSLNNMKILAEKGLLE---KKDIKELSFCENCVMGKSKKLSFNVGKHITDEVL 497
Query: 223 EYINSDLWG 249
YI++DLWG
Sbjct: 498 GYIHADLWG 506
Score = 41.2 bits (95), Expect(4) = 3e-78
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 5/120 (4%)
Frame = +1
Query: 811 KVYRLWAKGINGFKIITSRDVTFN*SEMPCLIDKNLKESEIDHSIKLQVEFTTPTEGINQ 990
K Y++W ++ K + SR++ FN ++ + K+++ES + V+ + EG N+
Sbjct: 688 KGYKVWL--LDEEKCVISRNIVFNENQ----VYKDIRESS-----EQSVKDISDLEGYNE 736
Query: 991 IQVELESEVKFDHNVQDSVDVEHQEVDDVAQETHHP-----DLEDYQLARDRTRRDIRAP 1155
QV ++ + +++ QE D T P DL +YQ ARDR RR P
Sbjct: 737 FQVSVKEHGECSKTGGVTIEEIDQESDSENSVTQEPLIASIDLSNYQSARDRERRAPNPP 796
>gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1335
Score = 189 bits (481), Expect(4) = 1e-77
Identities = 88/179 (49%), Positives = 124/179 (69%), Gaps = 3/179 (1%)
Frame = +2
Query: 287 FLSLIDDFSRKVWIFLLKQKSDTFERFKTWKTLIENQT*KKIKVLRTDNGLEFSNSDFSH 466
F+S +DD+SRKVWI+ L++K + FE+F WK ++ENQ+ +K+K LRTDNGLE+ N F
Sbjct: 496 FISFVDDYSRKVWIYFLRKKDEAFEKFVEWKKMVENQSDRKVKKLRTDNGLEYCNHYFEK 555
Query: 467 LCDESGILRYKTVPYTFQQNGVAERMNMTLLDKV---MVSSGLP*VLWGEVVMTASYIVN 637
C E GI+R+KT YT QQNG+AER+N T++DKV + SG+ W E TA Y++N
Sbjct: 556 FCKEEGIVRHKTCAYTPQQNGIAERLNRTIMDKVRSMLSRSGMEKKFWAEAASTAVYLIN 615
Query: 638 RTPFSALDGKTPEQQWSGKLPDFSHLRTFGYAAYSDQSIGKLEARAQKCVFL*YPDGLK 814
R+P +A++ PE++W+G LPD S LR FG AY GKL R++K +F YP+G+K
Sbjct: 616 RSPSTAINFDLPEEKWTGALPDLSSLRKFGCLAYIHADQGKLNPRSKKGIFTSYPEGVK 674
Score = 72.4 bits (176), Expect(4) = 1e-77
Identities = 34/83 (40%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Frame = +1
Query: 43 WHTKLAHVSEKGLHILQKQGFFFFFCKNVISKVPCCEHCTIGKHHRLHFSIGGHKTTSVL 222
WH++L H+S+KG+ IL K+G + VI ++ CE C GK HR+ F+ H T L
Sbjct: 417 WHSRLGHMSQKGMEILVKKGCLR---REVIKELEFCEDCVYGKQHRVSFAPAQHVTKEKL 473
Query: 223 EYINSDLWG-PSSVSTQGGNKYF 288
Y++SDLWG P + ++ G ++YF
Sbjct: 474 AYVHSDLWGSPHNPASLGNSQYF 496
Score = 66.2 bits (160), Expect(4) = 1e-77
Identities = 29/70 (41%), Positives = 46/70 (65%)
Frame = +3
Query: 1215 EPKTYSEAVNGQNVDNWYCAIKEEIESLKRNNTWILVPKPKSKSLVDCKWIFKVKEGVSD 1394
EPK+Y EA+ + + W A+KEE+ S+ +N+TW LV KP+ L+ C+W+F K G+
Sbjct: 815 EPKSYQEALLDPDWEKWNAAMKEEMVSMSKNHTWDLVTKPEKVKLIGCRWVFTRKAGIPG 874
Query: 1395 IKKPLKFKAR 1424
++ P +F AR
Sbjct: 875 VEAP-RFIAR 883
Score = 33.9 bits (76), Expect(4) = 1e-77
Identities = 39/129 (30%), Positives = 55/129 (42%), Gaps = 14/129 (10%)
Frame = +1
Query: 808 VKVYRLWAKGINGFKIITSRDVTFN*SEM---------PCLIDKNLKESEIDHSIKLQVE 960
VK Y++W + K + SR+V F M + + +L++ ++ + Q E
Sbjct: 673 VKGYKVWV--LEDKKCVISRNVIFREQVMFKDLKGDSQNTISESDLEDLRVNPDMNDQ-E 729
Query: 961 FTTPTEGINQIQVELESEVKFDHNV-----QDSVDVEHQEVDDVAQETHHPDLEDYQLAR 1125
FT +G SE HN S D E +E D A E DL YQL R
Sbjct: 730 FTD--QGGATQDNSNPSEATTSHNPVLNSPTHSQDEESEEEDSDAVE----DLSTYQLVR 783
Query: 1126 DRTRRDIRA 1152
DR RR I+A
Sbjct: 784 DRVRRTIKA 792
>pir||S23319 hypothetical protein 2 - Arabidopsis thaliana retrotransposon Ta1-2
(strain Landsberg) (fragment) gi|16384|emb|CAA37924.1|
unnamed protein product [Arabidopsis thaliana]
Length = 1084
Score = 177 bits (450), Expect(4) = 2e-76
Identities = 90/179 (50%), Positives = 117/179 (65%), Gaps = 3/179 (1%)
Frame = +2
Query: 287 FLSLIDDFSRKVWIFLLKQKSDTFERFKTWKTLIENQT*KKIKVLRTDNGLEFSNSDFSH 466
FLS+IDD +RKVW++ L+ K +TF+RF K L+ENQ KK+K LRTDNGLEF N F
Sbjct: 429 FLSIIDDKTRKVWLYFLRSKDETFDRFCERKELVENQQNKKVKCLRTDNGLEFCNLKFDA 488
Query: 467 LCDESGILRYKTVPYTFQQNGVAERMNMTLLDKV---MVSSGLP*VLWGEVVMTASYIVN 637
C + GI R+ T YT QQNGVA+RMN T+++KV + SGL W E TA+Y+++
Sbjct: 489 YCKDHGIERHMTCTYTPQQNGVADRMNRTIMEKVRCMLNESGLGEEFWAEAAATAAYLIS 548
Query: 638 RTPFSALDGKTPEQQWSGKLPDFSHLRTFGYAAYSDQSIGKLEARAQKCVFL*YPDGLK 814
R+P SA+D PE+ W K P + HLR FG AY GKL+ RA K +F+ YP G K
Sbjct: 549 RSPASAIDHNVPEELWLNKKPGYKHLRRFGSIAYVHIDQGKLKPRALKGIFIGYPSGTK 607
Score = 76.6 bits (187), Expect(4) = 2e-76
Identities = 32/84 (38%), Positives = 55/84 (65%)
Frame = +3
Query: 1173 VSLAAMSYQDLMFKEPKTYSEAVNGQNVDNWYCAIKEEIESLKRNNTWILVPKPKSKSLV 1352
V+ A ++ + L +EP++Y EA + + W A EE SL +N TW+LV KPK + ++
Sbjct: 731 VAFALVTVETLSMEEPQSYQEATSDKEWKKWKLATHEEKNSLIKNGTWVLVDKPKDRKII 790
Query: 1353 DCKWIFKVKEGVSDIKKPLKFKAR 1424
C+W+FK+K G+ + +P+++KAR
Sbjct: 791 GCRWLFKMKSGIPGV-EPVRYKAR 813
Score = 64.7 bits (156), Expect(4) = 2e-76
Identities = 29/83 (34%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Frame = +1
Query: 43 WHTKLAHVSEKGLHILQKQGFFFFFCKNVISKVPCCEHCTIGKHHRLHFSIGGHKTTSVL 222
WH++L H+ + +L +G K I ++ CE+C +GK ++ F++G H + VL
Sbjct: 350 WHSRLGHMGLNNMKVLAGKGLV---SKEEIRELDFCENCVMGKAKKVSFNMGKHNSEYVL 406
Query: 223 EYINSDLWGPSSVS-TQGGNKYF 288
Y+++DLWG ++V+ + GNKYF
Sbjct: 407 SYVHADLWGSTNVTPSLSGNKYF 429
Score = 38.5 bits (88), Expect(4) = 2e-76
Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 9/124 (7%)
Frame = +1
Query: 811 KVYRLWAKGINGFKIITSRDVTFN*SEM--PCLIDKNLKESEID---HSIKLQVEFTTP- 972
K Y++W + K + SR+V F+ + + + + ESE + HS ++ TP
Sbjct: 607 KGYKIWL--LEEQKCVISRNVLFHEELVYKDTIEKERVVESEAEPASHSKSTLIKMKTPG 664
Query: 973 ---TEGINQIQVELESEVKFDHNVQDSVDVEHQEVDDVAQETHHPDLEDYQLARDRTRRD 1143
+ G+ Q+ E ES+ D + VE E + L +YQL RDR RR
Sbjct: 665 NLNSGGVIQVSDEEESDESVDEEQEPEPQVELPETQTTSS------LANYQLVRDRERRQ 718
Query: 1144 IRAP 1155
I P
Sbjct: 719 IHPP 722
>gb|AAK38381.1|AC079028_5 polyprotein, putative [Arabidopsis thaliana]
Length = 855
Score = 183 bits (464), Expect(4) = 8e-74
Identities = 92/179 (51%), Positives = 118/179 (65%), Gaps = 3/179 (1%)
Frame = +2
Query: 287 FLSLIDDFSRKVWIFLLKQKSDTFERFKTWKTLIENQT*KKIKVLRTDNGLEFSNSDFSH 466
FLS+IDD SRKVW++ L+ K +TF++F WK L+ENQT K++K LRTDNGLEF N F
Sbjct: 202 FLSIIDDKSRKVWLYFLRSKDETFDKFCEWKELVENQTDKRVKCLRTDNGLEFCNIKFDS 261
Query: 467 LCDESGILRYKTVPYTFQQNGVAERMNMTLLDKV---MVSSGLP*VLWGEVVMTASYIVN 637
C + GI R+KT YT QQNGVAERMN T+++KV + SGL W EV TA YI+N
Sbjct: 262 YCKKYGIERHKTCTYTPQQNGVAERMNRTVMEKVRCLLNESGLEEEFWAEVATTAVYIIN 321
Query: 638 RTPFSALDGKTPEQQWSGKLPDFSHLRTFGYAAYSDQSIGKLEARAQKCVFL*YPDGLK 814
R+P +A+D PE+ W + P + HLR AY GKL+ RA K +F+ YP G K
Sbjct: 322 RSPSAAIDHNVPEELWLNRKPGYKHLRRLRAVAYVHVDQGKLKPRAIKGIFIGYPSGTK 380
Score = 72.8 bits (177), Expect(4) = 8e-74
Identities = 32/84 (38%), Positives = 54/84 (64%)
Frame = +3
Query: 1173 VSLAAMSYQDLMFKEPKTYSEAVNGQNVDNWYCAIKEEIESLKRNNTWILVPKPKSKSLV 1352
V+ A + + L +EP++Y EA + W A EE++SL +N TW LV KP ++ ++
Sbjct: 502 VAFALVVVESLSLEEPESYQEATQDKEWLKWKNATHEEMDSLIKNGTWDLVDKPTNRKII 561
Query: 1353 DCKWIFKVKEGVSDIKKPLKFKAR 1424
C+W+FK+K G+ + +P++FKAR
Sbjct: 562 GCRWLFKLKSGIPGV-EPVRFKAR 584
Score = 62.0 bits (149), Expect(4) = 8e-74
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Frame = +1
Query: 43 WHTKLAHVSEKGLHILQKQGFFFFFCKNVISKVPCCEHCTIGKHHRLHFSIGGHKTTSVL 222
WH++L H+ + IL +G + + + EHC +GK ++ F+IG H + +L
Sbjct: 123 WHSRLGHMGGNNMKILAGKGLIK---PSEATSLEFYEHCVMGKAKKVSFNIGKHNSEEIL 179
Query: 223 EYINSDLWGPSSVS-TQGGNKYF 288
Y+++DLWG +V+ + GNKYF
Sbjct: 180 SYVHADLWGSQNVTPSMSGNKYF 202
Score = 31.2 bits (69), Expect(4) = 8e-74
Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 10/125 (8%)
Frame = +1
Query: 811 KVYRLWAKGINGFKIITSRDVTFN*SEMPCLIDKNLKESEI----------DHSIKLQVE 960
K Y++W + K + SR+V F E D N KE+ + +H + + +
Sbjct: 380 KGYKVWL--LEEQKCVISRNVIFQ--EEVVYKDLNDKETVVKKEDIRTQTDNHLVISKTK 435
Query: 961 FTTPTEGINQIQVELESEVKFDHNVQDSVDVEHQEVDDVAQETHHPDLEDYQLARDRTRR 1140
+ G+ I+ E E + D ++V+ E D + L +YQLA+DR RR
Sbjct: 436 EVSDQGGVTHIE-ECEESDENDEQEPETVN----ETDPTVES--EGSLANYQLAKDRVRR 488
Query: 1141 DIRAP 1155
I P
Sbjct: 489 QINPP 493
>dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsis thaliana]
Length = 1342
Score = 181 bits (460), Expect(3) = 4e-65
Identities = 84/179 (46%), Positives = 121/179 (67%), Gaps = 3/179 (1%)
Frame = +2
Query: 287 FLSLIDDFSRKVWIFLLKQKSDTFERFKTWKTLIENQT*KKIKVLRTDNGLEFSNSDFSH 466
F++ IDDF+R+ WI+ ++ K + F +F WKT IENQ KK+K+L TDNGLEF N +F
Sbjct: 507 FITFIDDFTRRTWIYFIRTKDEAFSKFVEWKTQIENQQDKKLKILITDNGLEFCNQEFDS 566
Query: 467 LCDESGILRYKTVPYTFQQNGVAERMNMTLLDKV---MVSSGLP*VLWGEVVMTASYIVN 637
C + G++R++T YT QQNGVAERMN T+++KV + SGL W E TA +++N
Sbjct: 567 FCRKEGVIRHRTCAYTPQQNGVAERMNRTIMNKVRCMLSESGLGKQFWAEAASTAVFLIN 626
Query: 638 RTPFSALDGKTPEQQWSGKLPDFSHLRTFGYAAYSDQSIGKLEARAQKCVFL*YPDGLK 814
++P S+++ PE++W+G PD+ L+ FG AY GKL RA+K +FL YPDG+K
Sbjct: 627 KSPSSSIEFDIPEEKWTGHPPDYKILKKFGSVAYIHSDQGKLNPRAKKGIFLGYPDGVK 685
Score = 72.8 bits (177), Expect(3) = 4e-65
Identities = 33/84 (39%), Positives = 52/84 (61%)
Frame = +3
Query: 1173 VSLAAMSYQDLMFKEPKTYSEAVNGQNVDNWYCAIKEEIESLKRNNTWILVPKPKSKSLV 1352
V A +D EP+TY EA+ + W A EE++S+K+N+TW ++ KP+ K ++
Sbjct: 808 VGFALTMTEDGEVYEPETYEEAMRSPECEKWKQATIEEMDSMKKNDTWDVIDKPEGKRVI 867
Query: 1353 DCKWIFKVKEGVSDIKKPLKFKAR 1424
CKWIFK K G+ ++ P ++KAR
Sbjct: 868 GCKWIFKRKAGIPGVEPP-RYKAR 890
Score = 44.7 bits (104), Expect(3) = 4e-65
Identities = 38/127 (29%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Frame = +1
Query: 808 VKVYRLWAKGINGFKIITSRDVTFN*SEMPCLIDKNLKESEIDHSIKLQVEFTTPTEGIN 987
VK +++W + K + SRD+ F ++M K L+++++ K E +
Sbjct: 684 VKRFKVWL--LEDRKCVVSRDIVFQENQMY----KELQKNDMSEEDKQLTE-------VE 730
Query: 988 QIQVELESEVKFDHNVQDSVDVEHQEV---------DDVAQETHHPD--LEDYQLARDRT 1134
+ +EL++ D N + D +QE D +ET D LE+Y LARDR
Sbjct: 731 RTLIELKNLSADDENQSEGGDNSNQEQASTTRSASKDKQVEETDSDDDCLENYLLARDRI 790
Query: 1135 RRDIRAP 1155
RR IRAP
Sbjct: 791 RRQIRAP 797
>ref|XP_009107606.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC103833265 [Brassica rapa]
Length = 3353
Score = 191 bits (485), Expect(2) = 6e-64
Identities = 96/179 (53%), Positives = 120/179 (67%), Gaps = 3/179 (1%)
Frame = +2
Query: 287 FLSLIDDFSRKVWIFLLKQKSDTFERFKTWKTLIENQT*KKIKVLRTDNGLEFSNSDFSH 466
F+S IDDFS+KVW++ L+ K + F +FK WK +E+ T KKIK LRTDNGLEF N+ F
Sbjct: 433 FISFIDDFSKKVWVYFLQTKDEAFSKFKEWKEAVESHTEKKIKCLRTDNGLEFCNNRFDE 492
Query: 467 LCDESGILRYKTVPYTFQQNGVAERMNMTLLDKV---MVSSGLP*VLWGEVVMTASYIVN 637
LC SGI R++T YT QQNGV+ERMN T++DKV + +GL W E TA Y++N
Sbjct: 493 LCRTSGIKRHRTCNYTPQQNGVSERMNRTIMDKVRSMLAETGLGQEFWAEATSTAVYLIN 552
Query: 638 RTPFSALDGKTPEQQWSGKLPDFSHLRTFGYAAYSDQSIGKLEARAQKCVFL*YPDGLK 814
RTP S +D K PE+ WSG PD SHLR FG AY S K + RA K VF+ YP G+K
Sbjct: 553 RTPNSTIDFKLPEEVWSGNRPDLSHLRRFGCTAYVHVSQEKTKPRAIKGVFVGYPFGVK 611
Score = 191 bits (485), Expect(2) = 6e-64
Identities = 96/179 (53%), Positives = 120/179 (67%), Gaps = 3/179 (1%)
Frame = +2
Query: 287 FLSLIDDFSRKVWIFLLKQKSDTFERFKTWKTLIENQT*KKIKVLRTDNGLEFSNSDFSH 466
F+S IDDFS+KVW++ L+ K + F +FK WK +E+ T KKIK LRTDNGLEF N+ F
Sbjct: 2508 FISFIDDFSKKVWVYFLQTKDEAFSKFKEWKEAVESHTEKKIKCLRTDNGLEFCNNRFDE 2567
Query: 467 LCDESGILRYKTVPYTFQQNGVAERMNMTLLDKV---MVSSGLP*VLWGEVVMTASYIVN 637
LC SGI R++T YT QQNGV+ERMN T++DKV + +GL W E TA Y++N
Sbjct: 2568 LCRTSGIKRHRTCNYTPQQNGVSERMNRTIMDKVRSMLAETGLGQEFWAEATSTAVYLIN 2627
Query: 638 RTPFSALDGKTPEQQWSGKLPDFSHLRTFGYAAYSDQSIGKLEARAQKCVFL*YPDGLK 814
RTP S +D K PE+ WSG PD SHLR FG AY S K + RA K VF+ YP G+K
Sbjct: 2628 RTPNSTIDFKLPEEVWSGNRPDLSHLRRFGCTAYVHVSQEKTKPRAIKGVFVGYPFGVK 2686
Score = 82.8 bits (203), Expect(2) = 6e-64
Identities = 38/83 (45%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Frame = +1
Query: 43 WHTKLAHVSEKGLHILQKQGFFFFFCKNVISKVPCCEHCTIGKHHRLHFSIGGHKTTSVL 222
WHT+L H+S K + +L K+GF K + K+ CE C +GK H+L F H T +L
Sbjct: 354 WHTRLGHMSSKNMELLAKEGFI---PKTEVGKLEFCEGCVLGKKHKLSFPTAKHTTKGIL 410
Query: 223 EYINSDLWG-PSSVSTQGGNKYF 288
EY++SDLWG PS+ + GG KYF
Sbjct: 411 EYVHSDLWGSPSTPGSLGGCKYF 433
Score = 82.8 bits (203), Expect(2) = 6e-64
Identities = 38/83 (45%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Frame = +1
Query: 43 WHTKLAHVSEKGLHILQKQGFFFFFCKNVISKVPCCEHCTIGKHHRLHFSIGGHKTTSVL 222
WHT+L H+S K + +L K+GF K + K+ CE C +GK H+L F H T +L
Sbjct: 2429 WHTRLGHMSSKNMELLAKEGFI---PKTEVGKLEFCEGCVLGKKHKLSFPTAKHTTKGIL 2485
Query: 223 EYINSDLWG-PSSVSTQGGNKYF 288
EY++SDLWG PS+ + GG KYF
Sbjct: 2486 EYVHSDLWGSPSTPGSLGGCKYF 2508
Score = 77.0 bits (188), Expect = 3e-11
Identities = 38/72 (52%), Positives = 45/72 (62%)
Frame = +2
Query: 599 WGEVVMTASYIVNRTPFSALDGKTPEQQWSGKLPDFSHLRTFGYAAYSDQSIGKLEARAQ 778
W E TA Y++NRTP S +D K PE+ WSG PD SHLR FG AY S K + RA
Sbjct: 1239 WAEATSTAVYLINRTPNSTIDFKLPEEVWSGNRPDLSHLRRFGCTAYVHVSQEKTKPRAI 1298
Query: 779 KCVFL*YPDGLK 814
K VF+ YP G+K
Sbjct: 1299 KGVFVGYPFGVK 1310
Score = 69.7 bits (169), Expect = 5e-09
Identities = 33/84 (39%), Positives = 51/84 (60%)
Frame = +3
Query: 1173 VSLAAMSYQDLMFKEPKTYSEAVNGQNVDNWYCAIKEEIESLKRNNTWILVPKPKSKSLV 1352
V+ A D+ +EPK++ EA ++ +W A EE++SL RN+TW L+ +PK + V
Sbjct: 756 VAYALSVADDIEREEPKSFEEAKKSKDWKHWNNAADEEMDSLNRNHTWDLIERPKGQKTV 815
Query: 1353 DCKWIFKVKEGVSDIKKPLKFKAR 1424
CKWIFK K G+ + +P + K R
Sbjct: 816 GCKWIFKYKPGIPGV-EPCRHKGR 838
Score = 69.7 bits (169), Expect = 5e-09
Identities = 33/84 (39%), Positives = 51/84 (60%)
Frame = +3
Query: 1173 VSLAAMSYQDLMFKEPKTYSEAVNGQNVDNWYCAIKEEIESLKRNNTWILVPKPKSKSLV 1352
V+ A D+ +EPK++ EA ++ +W A EE++SL RN+TW L+ +PK + V
Sbjct: 1455 VAYALSVADDIEREEPKSFEEAKKSKDWKHWNNAADEEMDSLNRNHTWDLIERPKGQKTV 1514
Query: 1353 DCKWIFKVKEGVSDIKKPLKFKAR 1424
CKWIFK K G+ + +P + K R
Sbjct: 1515 GCKWIFKYKPGIPGV-EPCRHKGR 1537
Score = 69.7 bits (169), Expect = 5e-09
Identities = 33/84 (39%), Positives = 51/84 (60%)
Frame = +3
Query: 1173 VSLAAMSYQDLMFKEPKTYSEAVNGQNVDNWYCAIKEEIESLKRNNTWILVPKPKSKSLV 1352
V+ A D+ +EPK++ EA ++ +W A EE++SL RN+TW L+ +PK + V
Sbjct: 2831 VAYALSVADDIEREEPKSFEEAKKSKDWKHWNNAADEEMDSLNRNHTWDLIERPKGQKTV 2890
Query: 1353 DCKWIFKVKEGVSDIKKPLKFKAR 1424
CKWIFK K G+ + +P + K R
Sbjct: 2891 GCKWIFKYKPGIPGV-EPCRHKGR 2913
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 192 bits (488), Expect(2) = 2e-62
Identities = 91/178 (51%), Positives = 124/178 (69%), Gaps = 3/178 (1%)
Frame = +2
Query: 290 LSLIDDFSRKVWIFLLKQKSDTFERFKTWKTLIENQT*KKIKVLRTDNGLEFSNSDFSHL 469
++++DD+SRKVW + LK K F+ FK WKT++E QT +K+K+LRTDNG+EF + F
Sbjct: 722 MTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSY 781
Query: 470 CDESGILRYKTVPYTFQQNGVAERMNMTLLDK---VMVSSGLP*VLWGEVVMTASYIVNR 640
C GI+R+ TVP+T QQNGVAERMN T++ K ++ ++GLP W E V TA Y++NR
Sbjct: 782 CKSEGIVRHYTVPHTPQQNGVAERMNRTIISKARCLLSNAGLPKQFWAEAVSTACYLINR 841
Query: 641 TPFSALDGKTPEQQWSGKLPDFSHLRTFGYAAYSDQSIGKLEARAQKCVFL*YPDGLK 814
+P A+D KTP + WSG ++S LR FG AY+ GKLE RA KC+FL YP G+K
Sbjct: 842 SPSYAIDKKTPIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVK 899
Score = 76.6 bits (187), Expect(2) = 2e-62
Identities = 34/81 (41%), Positives = 49/81 (60%)
Frame = +1
Query: 43 WHTKLAHVSEKGLHILQKQGFFFFFCKNVISKVPCCEHCTIGKHHRLHFSIGGHKTTSVL 222
WH +L H++E GL L K+G I K+ CEHC GKH R+ F+ H T +L
Sbjct: 643 WHMRLGHMTEIGLAELSKRGLLD---GQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGIL 699
Query: 223 EYINSDLWGPSSVSTQGGNKY 285
+Y++SDLWGP+ ++ GG +Y
Sbjct: 700 DYVHSDLWGPARKTSFGGTRY 720
Score = 73.6 bits (179), Expect = 4e-10
Identities = 34/70 (48%), Positives = 47/70 (67%)
Frame = +3
Query: 1215 EPKTYSEAVNGQNVDNWYCAIKEEIESLKRNNTWILVPKPKSKSLVDCKWIFKVKEGVSD 1394
EP TYSEA+ + + W A+ +E+ESL++N+TW LV PK K + CKWIFK KEG+S
Sbjct: 1022 EPSTYSEAIVSDDCNRWITAMHDEMESLEKNHTWELVKLPKEKKPIRCKWIFKRKEGISS 1081
Query: 1395 IKKPLKFKAR 1424
++KAR
Sbjct: 1082 -SDEARYKAR 1090
>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
Japonica Group]
Length = 1601
Score = 192 bits (488), Expect(2) = 2e-62
Identities = 91/178 (51%), Positives = 124/178 (69%), Gaps = 3/178 (1%)
Frame = +2
Query: 290 LSLIDDFSRKVWIFLLKQKSDTFERFKTWKTLIENQT*KKIKVLRTDNGLEFSNSDFSHL 469
++++DD+SRKVW + LK K F+ FK WKT++E QT +K+K+LRTDNG+EF + F
Sbjct: 515 MTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSY 574
Query: 470 CDESGILRYKTVPYTFQQNGVAERMNMTLLDK---VMVSSGLP*VLWGEVVMTASYIVNR 640
C GI+R+ TVP+T QQNGVAERMN T++ K ++ ++GLP W E V TA Y++NR
Sbjct: 575 CKSEGIVRHYTVPHTPQQNGVAERMNRTIISKARCLLSNAGLPKQFWAEAVSTACYLINR 634
Query: 641 TPFSALDGKTPEQQWSGKLPDFSHLRTFGYAAYSDQSIGKLEARAQKCVFL*YPDGLK 814
+P A+D KTP + WSG ++S LR FG AY+ GKLE RA KC+FL YP G+K
Sbjct: 635 SPSYAIDKKTPIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVK 692
Score = 76.6 bits (187), Expect(2) = 2e-62
Identities = 34/81 (41%), Positives = 49/81 (60%)
Frame = +1
Query: 43 WHTKLAHVSEKGLHILQKQGFFFFFCKNVISKVPCCEHCTIGKHHRLHFSIGGHKTTSVL 222
WH +L H++E GL L K+G I K+ CEHC GKH R+ F+ H T +L
Sbjct: 436 WHMRLGHMTEIGLAELSKRGLLD---GQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGIL 492
Query: 223 EYINSDLWGPSSVSTQGGNKY 285
+Y++SDLWGP+ ++ GG +Y
Sbjct: 493 DYVHSDLWGPARKTSFGGTRY 513
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 193 bits (490), Expect(2) = 1e-61
Identities = 95/179 (53%), Positives = 127/179 (70%), Gaps = 3/179 (1%)
Frame = +2
Query: 287 FLSLIDDFSRKVWIFLLKQKSDTFERFKTWKTLIENQT*KKIKVLRTDNGLEFSNSDFSH 466
F+S+IDD+SR W++++K KS+ F++FK WK L+ENQT KKIK LRTDNGLEF S+F
Sbjct: 492 FVSIIDDYSRMTWVYMMKHKSEAFQKFKEWKILMENQTGKKIKRLRTDNGLEFCWSEFDQ 551
Query: 467 LCDESGILRYKTVPYTFQQNGVAERMNMTLLDK---VMVSSGLP*VLWGEVVMTASYIVN 637
C + GI R++TV T QQNGVAERMN TLL++ ++ ++GL W E V TA Y++N
Sbjct: 552 FCKDEGIARHRTVRNTPQQNGVAERMNQTLLERARCMLSNAGLDRRFWAEAVSTACYLIN 611
Query: 638 RTPFSALDGKTPEQQWSGKLPDFSHLRTFGYAAYSDQSIGKLEARAQKCVFL*YPDGLK 814
R P + + KTP + WSGK D+S+L+ FG AY S GKLE RA+K VF+ Y DG+K
Sbjct: 612 RGPHTGIQCKTPMEMWSGKAADYSNLKAFGCTAYYHVSEGKLEPRAKKGVFVGYGDGVK 670
Score = 73.2 bits (178), Expect(2) = 1e-61
Identities = 32/82 (39%), Positives = 46/82 (56%)
Frame = +1
Query: 43 WHTKLAHVSEKGLHILQKQGFFFFFCKNVISKVPCCEHCTIGKHHRLHFSIGGHKTTSVL 222
WH +L H+ E+G+ IL K+ + + + CEHC GK HR F H+T L
Sbjct: 414 WHIRLGHMGERGMQILSKEDLL---AGHKVKSLEFCEHCVFGKLHRNKFPKAIHRTKGTL 470
Query: 223 EYINSDLWGPSSVSTQGGNKYF 288
+YI+SD WGP V + GG ++F
Sbjct: 471 DYIHSDCWGPCRVESLGGCRFF 492
Score = 77.8 bits (190), Expect = 2e-11
Identities = 35/88 (39%), Positives = 55/88 (62%)
Frame = +3
Query: 1161 FGDYVSLAAMSYQDLMFKEPKTYSEAVNGQNVDNWYCAIKEEIESLKRNNTWILVPKPKS 1340
F D V A +++ EP TY EA+ + + W+ A+ +E+ESL +N TW LV +P
Sbjct: 772 FEDMVGYALQVAEEVDTSEPSTYKEAILSSDSEKWFAAMGDEMESLHKNQTWDLVIQPSG 831
Query: 1341 KSLVDCKWIFKVKEGVSDIKKPLKFKAR 1424
+ ++ CKW+FK KEG+S + +K+KAR
Sbjct: 832 RKIITCKWVFKKKEGISP-AEGVKYKAR 858
>gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1356
Score = 182 bits (462), Expect(3) = 2e-61
Identities = 88/179 (49%), Positives = 122/179 (68%), Gaps = 3/179 (1%)
Frame = +2
Query: 287 FLSLIDDFSRKVWIFLLKQKSDTFERFKTWKTLIENQT*KKIKVLRTDNGLEFSNSDFSH 466
F+S+IDDF+RKVW++ +K K + FE+F W L+ENQT +++K LRTDNGLEF N F
Sbjct: 520 FMSIIDDFTRKVWVYFMKTKDEAFEKFVEWVNLVENQTDRRVKTLRTDNGLEFCNKLFDG 579
Query: 467 LCDESGILRYKTVPYTFQQNGVAERMNMTLLDKV---MVSSGLP*VLWGEVVMTASYIVN 637
C+ GI R++T YT QQNGVAERMN T+++KV + SGLP W E T ++N
Sbjct: 580 FCESIGIHRHRTCAYTPQQNGVAERMNRTIMEKVRSMLSDSGLPKRFWAEATHTTVLLIN 639
Query: 638 RTPFSALDGKTPEQQWSGKLPDFSHLRTFGYAAYSDQSIGKLEARAQKCVFL*YPDGLK 814
+TP SAL+ + P+++WSG P +S+LR +G A+ GKLE RA+K V + YP G+K
Sbjct: 640 KTPSSALNFEIPDKKWSGNPPVYSYLRRYGCVAFVHTDDGKLEPRAKKGVLIGYPVGVK 698
Score = 75.1 bits (183), Expect(3) = 2e-61
Identities = 34/86 (39%), Positives = 56/86 (65%)
Frame = +3
Query: 1167 DYVSLAAMSYQDLMFKEPKTYSEAVNGQNVDNWYCAIKEEIESLKRNNTWILVPKPKSKS 1346
DY + A + +D EP+ Y +A N D W A+ EEI+S ++NNTW +V +P+++
Sbjct: 820 DYYAEALYTTEDGEAVEPENYRKAKLDANFDKWKLAMDEEIDSQEKNNTWTIVTRPENQR 879
Query: 1347 LVDCKWIFKVKEGVSDIKKPLKFKAR 1424
++ C+WIFK K G+ +++P +FKAR
Sbjct: 880 IIGCRWIFKYKLGILGVEEP-RFKAR 904
Score = 28.9 bits (63), Expect(3) = 2e-61
Identities = 28/120 (23%), Positives = 53/120 (44%), Gaps = 4/120 (3%)
Frame = +1
Query: 808 VKVYRLWAKGINGFKIITSRDVTFN*SEMPCLI---DKNLKESEIDHSIK-LQVEFTTPT 975
VK Y++W ++ K + SR++ F + + + +N+ E D + L+ +
Sbjct: 697 VKGYKVWI--LDERKCVVSRNIIFQENAVYKDLMQRQENVSTEEDDQTGSYLEFDLEAER 754
Query: 976 EGINQIQVELESEVKFDHNVQDSVDVEHQEVDDVAQETHHPDLEDYQLARDRTRRDIRAP 1155
+ I+ E+ + + + S DD + + L Y L RDR +R+IRAP
Sbjct: 755 DVISGGDQEMVNTIPAPESPVVSTPTTQDTNDDEDSDVNQSPLS-YHLVRDRDKREIRAP 813
Score = 69.3 bits (168), Expect = 7e-09
Identities = 41/102 (40%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Frame = +1
Query: 43 WHTKLAHVSEKGLHILQKQGFFFFFCKNVISKVPCCEHCTIGKHHRLHFSIGGHKTTSVL 222
WH +L H+S+K + IL ++GF K +S + CE C GK R FS+ H T L
Sbjct: 441 WHQRLCHMSQKNMEILVRKGFLD---KKKVSSLDVCEDCIYGKAKRKSFSLAHHDTKEKL 497
Query: 223 EYINSDLWGPSSVSTQGGN-KYFPFPD**FL*KSLDFFVKTK 345
EYI+SDLWG V G +YF F K +F+KTK
Sbjct: 498 EYIHSDLWGAPFVPLSLGKCQYFMSIIDDFTRKVWVYFMKTK 539
>gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Japonica Group]
gi|20087076|gb|AAM10749.1|AC112514_2 Putative
retroelement [Oryza sativa Japonica Group]
Length = 1225
Score = 188 bits (477), Expect(2) = 3e-61
Identities = 89/178 (50%), Positives = 123/178 (69%), Gaps = 3/178 (1%)
Frame = +2
Query: 290 LSLIDDFSRKVWIFLLKQKSDTFERFKTWKTLIENQT*KKIKVLRTDNGLEFSNSDFSHL 469
++++DD+SRKVW + LK K F+ FK WKT++E QT +K+K+LRTDNG++F + F
Sbjct: 476 MTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMDFCSKIFKSY 535
Query: 470 CDESGILRYKTVPYTFQQNGVAERMNMTLLDK---VMVSSGLP*VLWGEVVMTASYIVNR 640
C GI+R+ TVP+T QQNGVAERMN T++ K ++ ++GLP W E V TA Y++NR
Sbjct: 536 CKSEGIVRHYTVPHTPQQNGVAERMNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINR 595
Query: 641 TPFSALDGKTPEQQWSGKLPDFSHLRTFGYAAYSDQSIGKLEARAQKCVFL*YPDGLK 814
+P A+D KTP + WSG ++S LR FG AY+ KLE RA KC+FL YP G+K
Sbjct: 596 SPSYAIDKKTPIKVWSGSPANYSDLRVFGCIAYAHVDNSKLEPRAIKCIFLGYPSGVK 653
Score = 77.0 bits (188), Expect(2) = 3e-61
Identities = 35/81 (43%), Positives = 49/81 (60%)
Frame = +1
Query: 43 WHTKLAHVSEKGLHILQKQGFFFFFCKNVISKVPCCEHCTIGKHHRLHFSIGGHKTTSVL 222
WH +L H+SE GL L K+G I K+ CEHC GKH R+ F+ H T +L
Sbjct: 397 WHMRLGHMSEIGLAELSKRGLLD---GQSIKKLKFCEHCIFGKHKRVKFNTSTHTTEGIL 453
Query: 223 EYINSDLWGPSSVSTQGGNKY 285
+Y++SDLWGP+ ++ GG +Y
Sbjct: 454 DYVHSDLWGPARKTSFGGARY 474
Score = 70.1 bits (170), Expect = 4e-09
Identities = 30/59 (50%), Positives = 42/59 (71%)
Frame = +3
Query: 1215 EPKTYSEAVNGQNVDNWYCAIKEEIESLKRNNTWILVPKPKSKSLVDCKWIFKVKEGVS 1391
EP TYS+A+ + + W A+ +E+ESL++N+TW LV PK K + CKWIFK KEG+S
Sbjct: 776 EPSTYSDAIVSDDCNRWITAMHDEMESLEKNHTWELVKLPKEKKPIRCKWIFKRKEGMS 834
>emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa Indica Group]
Length = 1009
Score = 185 bits (469), Expect(2) = 4e-61
Identities = 89/178 (50%), Positives = 120/178 (67%), Gaps = 3/178 (1%)
Frame = +2
Query: 290 LSLIDDFSRKVWIFLLKQKSDTFERFKTWKTLIENQT*KKIKVLRTDNGLEFSNSDFSHL 469
+++IDD+SRKVW + LK K F+ FK WKT++E QT +K+K+LR DNG+EF + F
Sbjct: 336 MTIIDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRPDNGMEFCSKIFKSY 395
Query: 470 CDESGILRYKTVPYTFQQNGVAERMNMTLLDK---VMVSSGLP*VLWGEVVMTASYIVNR 640
C GI+R+ TVP+T QQNGVAERMN T++ K ++ ++GLP W E V TA Y++NR
Sbjct: 396 CKSEGIVRHYTVPHTPQQNGVAERMNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINR 455
Query: 641 TPFSALDGKTPEQQWSGKLPDFSHLRTFGYAAYSDQSIGKLEARAQKCVFL*YPDGLK 814
+P A+D KTP + WS +S LR F AY+ GKLE RA KC+FL YP G+K
Sbjct: 456 SPSYAIDKKTPIEVWSSSPAKYSDLRVFSCTAYAHVDNGKLEPRAIKCIFLGYPSGVK 513
Score = 79.7 bits (195), Expect(2) = 4e-61
Identities = 36/81 (44%), Positives = 50/81 (61%)
Frame = +1
Query: 43 WHTKLAHVSEKGLHILQKQGFFFFFCKNVISKVPCCEHCTIGKHHRLHFSIGGHKTTSVL 222
WH +L H+SE GL L K+G I K+ CEHC GKHHR+ F+ H T +L
Sbjct: 257 WHMRLGHMSEIGLAELSKRGMLD---GQSIGKLIFCEHCIFGKHHRVKFNTSTHTTEGIL 313
Query: 223 EYINSDLWGPSSVSTQGGNKY 285
+Y++SDLWGP+ ++ GG +Y
Sbjct: 314 DYVHSDLWGPTCKTSFGGARY 334
Score = 70.1 bits (170), Expect = 4e-09
Identities = 30/59 (50%), Positives = 42/59 (71%)
Frame = +3
Query: 1215 EPKTYSEAVNGQNVDNWYCAIKEEIESLKRNNTWILVPKPKSKSLVDCKWIFKVKEGVS 1391
EP TYS+A+ + + W A+ +E+ESL++N+TW LV PK K + CKWIFK KEG+S
Sbjct: 636 EPSTYSDAIVSDDCNRWITAMHDEMESLEKNHTWELVKLPKEKKPIRCKWIFKRKEGMS 694
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 186 bits (473), Expect(2) = 4e-60
Identities = 88/178 (49%), Positives = 122/178 (68%), Gaps = 3/178 (1%)
Frame = +2
Query: 290 LSLIDDFSRKVWIFLLKQKSDTFERFKTWKTLIENQT*KKIKVLRTDNGLEFSNSDFSHL 469
+++++D+SRKVW + LK K F FK WKT++E QT +K+K+LRTDNG+EF + F
Sbjct: 500 MTIVNDYSRKVWPYFLKHKYQAFNVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSY 559
Query: 470 CDESGILRYKTVPYTFQQNGVAERMNMTLLDK---VMVSSGLP*VLWGEVVMTASYIVNR 640
C GI+R+ TVP+T QQNGVAERMN T++ K ++ ++GLP W E V TA Y++NR
Sbjct: 560 CKSEGIMRHYTVPHTPQQNGVAERMNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINR 619
Query: 641 TPFSALDGKTPEQQWSGKLPDFSHLRTFGYAAYSDQSIGKLEARAQKCVFL*YPDGLK 814
+P A+D KTP + WSG ++S L+ FG AY+ GKLE R KC+FL YP G+K
Sbjct: 620 SPGYAIDKKTPIKVWSGSPANYSDLKVFGCTAYAHVDNGKLEPRTIKCIFLGYPSGVK 677
Score = 74.7 bits (182), Expect(2) = 4e-60
Identities = 34/81 (41%), Positives = 48/81 (59%)
Frame = +1
Query: 43 WHTKLAHVSEKGLHILQKQGFFFFFCKNVISKVPCCEHCTIGKHHRLHFSIGGHKTTSVL 222
WH +L H+SE GL L +G I K+ CEHC GKH R+ F+ H T +L
Sbjct: 421 WHMRLGHMSEIGLAELSMRGLLD---GQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGIL 477
Query: 223 EYINSDLWGPSSVSTQGGNKY 285
+Y++SDLWGP+ ++ GG +Y
Sbjct: 478 DYVHSDLWGPARKTSFGGARY 498