BLASTX nr result

ID: Forsythia23_contig00019836 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia23_contig00019836
         (696 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011101707.1| PREDICTED: zinc finger CCCH domain-containin...   132   2e-28
ref|XP_011074773.1| PREDICTED: zinc finger CCCH domain-containin...    86   2e-14
emb|CAN61511.1| hypothetical protein VITISV_013331 [Vitis vinifera]    76   2e-11
ref|XP_002278177.1| PREDICTED: zinc finger CCCH domain-containin...    74   6e-11
emb|CDP20617.1| unnamed protein product [Coffea canephora]             70   1e-09
ref|XP_010245822.1| PREDICTED: zinc finger CCCH domain-containin...    57   8e-06

>ref|XP_011101707.1| PREDICTED: zinc finger CCCH domain-containing protein 55-like
            [Sesamum indicum] gi|747046902|ref|XP_011101709.1|
            PREDICTED: zinc finger CCCH domain-containing protein
            55-like [Sesamum indicum]
            gi|747046904|ref|XP_011101712.1| PREDICTED: zinc finger
            CCCH domain-containing protein 55-like [Sesamum indicum]
          Length = 927

 Score =  132 bits (332), Expect = 2e-28
 Identities = 91/234 (38%), Positives = 120/234 (51%), Gaps = 10/234 (4%)
 Frame = +2

Query: 20   HPVFFPGQIFNQNGKSLFPGLSSFSNETDRNQHVL---------FDLNGPQQHKSSPSRL 172
            HP+ F GQ  NQ+G S+FPG SS   E  R Q+VL          DLN P+ H       
Sbjct: 567  HPILFSGQSLNQDGGSMFPGHSSILTEDHRVQNVLCPNPSNGFSVDLNRPEIHIVDLLNA 626

Query: 173  QSQMQNLQNAFKTPEMTELQAPXXXXXXXXXXXXXXMTKSPVGITCEQGAPVIDSSAFMA 352
            Q+QMQN Q A  +  + E + P              +T S V     Q +PV D  + + 
Sbjct: 627  QTQMQNNQKAVHSQGLLEAKVPQLLTNLLTSEHPAQVTNSLVSNLGRQVSPVTDPVS-LT 685

Query: 353  QRFVNEEQQPQVFAGLDTTSSPGRVLSYSDTAHFVPLINTMNVQSNLVASSLDLLNPMGN 532
            QR  NE+ Q   +  ++ + S   V  +SD+    P +N++NVQ N  A++L LLN MGN
Sbjct: 686  QRLANEDSQ--TYEDMEVSGSKAMVPPFSDSTGRAPFVNSINVQHNQNAAALSLLNSMGN 743

Query: 533  GKADIE-SNHNLASATVSHSVEQKNQMHKERSSPLSTVDPVFGSSTVKHHESPK 691
            G+ D E SNHNLA  T     E++NQM  E SSPL  V   F SS VKH  SP+
Sbjct: 744  GRDDTEHSNHNLAQVT-----EERNQMRLEPSSPLPVVTE-FDSSKVKHPGSPR 791


>ref|XP_011074773.1| PREDICTED: zinc finger CCCH domain-containing protein 55-like
            [Sesamum indicum] gi|747056984|ref|XP_011074774.1|
            PREDICTED: zinc finger CCCH domain-containing protein
            55-like [Sesamum indicum]
            gi|747056986|ref|XP_011074775.1| PREDICTED: zinc finger
            CCCH domain-containing protein 55-like [Sesamum indicum]
          Length = 838

 Score = 86.3 bits (212), Expect = 2e-14
 Identities = 61/171 (35%), Positives = 84/171 (49%), Gaps = 4/171 (2%)
 Frame = +2

Query: 5    SGNAKHPVFFPGQIFNQNGKSLFPGLSSFSNETDRNQHVLFD--LNGPQQHKSSPSRL-- 172
            S N  HP+ F G+  NQN +++FPG SS SNETD  Q++L     NG     S P  L  
Sbjct: 544  SRNTTHPIRFSGKNSNQNVENVFPGHSSISNETDSGQNMLCSNPSNGFSGDLSGPGSLNF 603

Query: 173  QSQMQNLQNAFKTPEMTELQAPXXXXXXXXXXXXXXMTKSPVGITCEQGAPVIDSSAFMA 352
            Q QMQN Q A + P M + +                +T S V I  +Q APV   S FMA
Sbjct: 604  QFQMQNHQKAVEIPGMLDTKVSQILPNLLTSLHSAQLTNSQVTIAGQQVAPVTKPSVFMA 663

Query: 353  QRFVNEEQQPQVFAGLDTTSSPGRVLSYSDTAHFVPLINTMNVQSNLVASS 505
            QRFVNE+ +       + ++  G   S+SD +  +   +    Q  ++ASS
Sbjct: 664  QRFVNEQSERN--DNTELSNPRGTTPSFSDNSKVIHPRSPKQKQETVLASS 712


>emb|CAN61511.1| hypothetical protein VITISV_013331 [Vitis vinifera]
          Length = 913

 Score = 75.9 bits (185), Expect = 2e-11
 Identities = 72/242 (29%), Positives = 104/242 (42%), Gaps = 18/242 (7%)
 Frame = +2

Query: 20   HPVFFPGQIFNQNGKSLFPGLSSFSNETDRNQHVL---------FDLNGPQQHKSSPSRL 172
            H +  P Q FN++G +L        NET ++QH+           DLNGP +  +SP  L
Sbjct: 549  HTLHVPRQSFNKDGDNLGSQPPLSFNETSQSQHMCNLNPLNGHTIDLNGPVZRINSPLNL 608

Query: 173  QSQMQNLQ-NAFKTPEMTELQAPXXXXXXXXXXXXXXMTKSPVGITCEQGAPVIDSSAFM 349
            QSQ Q  Q  + +TPEM E + P              +T +PVG        +   S  +
Sbjct: 609  QSQTQXCQGESVETPEMMECKVP----QVISGTPRNFITNNPVG-------QMSSLSESL 657

Query: 350  AQRFVNEEQQPQVFAGLDTTSSPGRVLSYSDTAHFVPLINTMNVQSNLVAS-----SLDL 514
            AQ F N +Q  Q +A L+T +S   V S+S+TA  VP I +M VQ N           + 
Sbjct: 658  AQVFGNGQQLLQPYAVLNTPNSMDLVSSHSNTAGLVPSITSMTVQPNAATCFQEQYQAES 717

Query: 515  LNPMGNGKADIESNHNLASATVSHSVEQKN---QMHKERSSPLSTVDPVFGSSTVKHHES 685
            L P   G +     ++L  +     V  K     M    +   S      G+S  +H +S
Sbjct: 718  LEPSKPGSSSQPHGYSLNPSEQKTLVPSKGFSLSMMSASAGTNSAEMIKIGNSEDEHCKS 777

Query: 686  PK 691
            PK
Sbjct: 778  PK 779


>ref|XP_002278177.1| PREDICTED: zinc finger CCCH domain-containing protein 55 [Vitis
            vinifera] gi|731430123|ref|XP_010664885.1| PREDICTED:
            zinc finger CCCH domain-containing protein 55 [Vitis
            vinifera]
          Length = 913

 Score = 74.3 bits (181), Expect = 6e-11
 Identities = 72/242 (29%), Positives = 104/242 (42%), Gaps = 18/242 (7%)
 Frame = +2

Query: 20   HPVFFPGQIFNQNGKSLFPGLSSFSNETDRNQHVL---------FDLNGPQQHKSSPSRL 172
            H +  P Q FN++G +L        NET ++QH+           DLNGP +  +SP  L
Sbjct: 549  HTLHVPRQSFNKDGDNLGSQPPLSFNETSQSQHMCNLNPLNGHTIDLNGPVERINSPLNL 608

Query: 173  QSQMQNLQ-NAFKTPEMTELQAPXXXXXXXXXXXXXXMTKSPVGITCEQGAPVIDSSAFM 349
            QSQ Q  Q  + +TPEM E + P              +T +PVG        +   S  +
Sbjct: 609  QSQTQFCQGESVETPEMMECKVP----QVISGTPRNFITNNPVG-------QMSSLSESL 657

Query: 350  AQRFVNEEQQPQVFAGLDTTSSPGRVLSYSDTAHFVPLINTMNVQSNLVAS-----SLDL 514
            AQ F N +Q  Q +A L+T +S   V S+S+TA  VP I +M VQ N           + 
Sbjct: 658  AQVFGNGQQLLQPYAVLNTPNSMDLVSSHSNTAGLVPSITSMTVQPNAATCFQEQYQAES 717

Query: 515  LNPMGNGKADIESNHNLASATVSHSVEQKN---QMHKERSSPLSTVDPVFGSSTVKHHES 685
            L P   G +     ++L  +     V  K     M    +   S      G+S  +H +S
Sbjct: 718  LEPSKPGSSSQPHGYSLNPSEQKTLVPSKGFSLSMMSASAGTNSAEMIKIGNSEDEHCKS 777

Query: 686  PK 691
            PK
Sbjct: 778  PK 779


>emb|CDP20617.1| unnamed protein product [Coffea canephora]
          Length = 895

 Score = 70.1 bits (170), Expect = 1e-09
 Identities = 75/247 (30%), Positives = 104/247 (42%), Gaps = 19/247 (7%)
 Frame = +2

Query: 11   NAKHPVFFPGQIFNQN---GKSLFPGLSSFSNETDRNQHVLF---------DLNGPQQHK 154
            N  +P F PGQ  NQN     SL   L S     D+  ++ F         DLNG  Q  
Sbjct: 542  NTNNPEFMPGQSLNQNVIGNLSLNHPLVS----NDQRDNLFFPHPSNVRNVDLNGSGQGL 597

Query: 155  SSPSRLQSQMQNLQN-AFKTPEMTELQAPXXXXXXXXXXXXXXMTKSPVGITCEQGAPVI 331
            SS   +Q+   + Q  A KTPE+ E  AP                 SP            
Sbjct: 598  SSTLIIQNHAGSHQKEAAKTPEIQEFGAPRSFYNNASNNQVPQNLLSP------------ 645

Query: 332  DSSAFMAQRFVNEEQQPQVFAGLDTTSSPGRVLSYSDTAHFVPLINTMNVQSNLVASSLD 511
             ++A    +FV E+ Q  + A L+  +S         TA    L   M +Q N    S  
Sbjct: 646  -AAASPMHKFVAEQTQTHLHAALNHLTS---------TALVSALETAMQIQPNTDVRSPV 695

Query: 512  LLNPMGNGKADIESNHNLASATVSHSVEQKNQMHKERSSPLSTVDPVFGS------STVK 673
             L+P+G+G+  +  N N  S  V +S EQKN +  E  SP+S  +P FG+      S V+
Sbjct: 696  QLDPLGDGRGKL-GNVNQTSGEVPYSYEQKNGIPFEEFSPMSGDNPQFGNTLISNISNVQ 754

Query: 674  HHESPKA 694
             HESP++
Sbjct: 755  CHESPES 761


>ref|XP_010245822.1| PREDICTED: zinc finger CCCH domain-containing protein 55 [Nelumbo
            nucifera]
          Length = 1019

 Score = 57.4 bits (137), Expect = 8e-06
 Identities = 65/220 (29%), Positives = 92/220 (41%), Gaps = 10/220 (4%)
 Frame = +2

Query: 5    SGNAKHPVFFPGQIFNQNGKSLFPGLSSFSNETDRNQHVLFDLNGPQQHKSSPSRLQSQM 184
            S N    V  PGQ FNQ+G+S+   L S  N   +NQ +L     PQ   S    L  Q+
Sbjct: 646  SANILPMVSVPGQSFNQSGQSIGTQLHSNFNMNGQNQQILL----PQPPNSHNFNLGDQL 701

Query: 185  QNLQNAFKTPEMTELQAPXXXXXXXXXXXXXXMTKSPVG---------ITCEQGAPVIDS 337
            Q  Q A   P     Q P                 S V          +T EQ A + + 
Sbjct: 702  Q--QEASGPPSNPHCQPPFHLGESIHKQGIADAQMSQVTSGISLTNNVVTSEQVAQITNL 759

Query: 338  SAFMAQRFVNEEQQPQVFAGLDTTSSPGRVLSYSDTAHFVPLINTMNVQSNLVASSLDLL 517
            SA +AQ F + +Q PQ++A L    +P  V S+S T    P+    N Q +    S    
Sbjct: 760  SASLAQIFGSGQQLPQIYASL----NPSNVPSHS-TGSVAPVTIFPN-QHDQTNWSQKPY 813

Query: 518  NPMGNG-KADIESNHNLASATVSHSVEQKNQMHKERSSPL 634
            +P+G+  ++    N + A    S+ +EQKN    E  +PL
Sbjct: 814  DPIGDSVESKKHDNGDRALMFSSNPIEQKNSAIGESPAPL 853


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