BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia23_contig00019404
         (2748 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011098511.1| PREDICTED: DNA repair protein UVH3 [Sesamum ...   885   0.0  
ref|XP_012849271.1| PREDICTED: DNA repair protein UVH3 isoform X...   783   0.0  
ref|XP_012849263.1| PREDICTED: DNA repair protein UVH3 isoform X...   783   0.0  
ref|XP_009588378.1| PREDICTED: DNA repair protein UVH3 isoform X...   717   0.0  
ref|XP_009588377.1| PREDICTED: DNA repair protein UVH3 isoform X...   717   0.0  
ref|XP_009801326.1| PREDICTED: DNA repair protein UVH3 [Nicotian...   708   0.0  
ref|XP_006357146.1| PREDICTED: DNA repair protein UVH3-like isof...   694   0.0  
ref|XP_006357145.1| PREDICTED: DNA repair protein UVH3-like isof...   694   0.0  
ref|XP_010317093.1| PREDICTED: DNA repair protein UVH3 isoform X...   685   0.0  
ref|XP_004233336.1| PREDICTED: DNA repair protein UVH3 isoform X...   685   0.0  
emb|CDP02141.1| unnamed protein product [Coffea canephora]            679   0.0  
ref|XP_010660946.1| PREDICTED: DNA repair protein UVH3 isoform X...   662   0.0  
ref|XP_002275112.1| PREDICTED: DNA repair protein UVH3 isoform X...   662   0.0  
gb|EYU44715.1| hypothetical protein MIMGU_mgv1a000262mg [Erythra...   608   e-171
ref|XP_007031407.1| DNA-repair protein UVH3, putative isoform 1 ...   576   e-161
ref|XP_012444069.1| PREDICTED: DNA repair protein UVH3 isoform X...   572   e-160
ref|XP_012444060.1| PREDICTED: DNA repair protein UVH3 isoform X...   572   e-160
ref|XP_012444053.1| PREDICTED: DNA repair protein UVH3 isoform X...   572   e-160
ref|XP_012444044.1| PREDICTED: DNA repair protein UVH3 isoform X...   572   e-160
ref|XP_012444035.1| PREDICTED: DNA repair protein UVH3 isoform X...   572   e-160

>ref|XP_011098511.1| PREDICTED: DNA repair protein UVH3 [Sesamum indicum]
          Length = 1522

 Score =  885 bits (2288), Expect = 0.0
 Identities = 517/929 (55%), Positives = 627/929 (67%), Gaps = 18/929 (1%)
 Frame = -1

Query: 2748 AVKSGTSMEIAFEDIGEHGCGDDDGDLFNRLVGEDPVMNFSIDNSVSVKQ-SLYSTSDCE 2572
            AV +GTS+EI+FED  ++ C +DD  LF  LV  +PVM+F++DNS SVKQ S +S SD E
Sbjct: 465  AVVNGTSIEISFEDTLDNECDNDDDKLFASLVAGNPVMDFAVDNSASVKQTSDHSASDFE 524

Query: 2571 ID-GVIQERGNVLSNDIKVVNEPSQMEGGMSDEDEVEWEEGSLDIPEKSSLCLDKSQKTF 2395
             + GVI+E+ +               EGGM  E EVEWEE   DI  KSS C D+SQKT 
Sbjct: 525  WEEGVIEEKRSAYL-----------FEGGMRGEGEVEWEEEVQDIQLKSSSCPDESQKTV 573

Query: 2394 TKGSLEEEAEFQEAIRRSLEDMVDCRIINEPCEDEESRRAGEKVIKD-----IDWEPVHE 2230
             KG+L+EE++ QEAIRRSLED   CR +N   E+    R  E V K+        + V+E
Sbjct: 574  RKGALQEESDIQEAIRRSLEDTRGCRSMNNFHENSICERGREVVTKEHMTHACQVQSVYE 633

Query: 2229 DKNKPEVEAPSEGFLQPPESPGIMNTSGTNSSKAKSVMYTVVDPGESNLEPNFWMQGKGG 2050
             K  PEV+A      QP  S  I+     N S+AKS  +  +   +S+L+     +  G 
Sbjct: 634  GKEGPEVDASMINVRQPFGSSNILEN---NCSEAKSAAFMDLKHEKSSLDLKLSSEDAGI 690

Query: 2049 SGALPGEMPVGSDA-PLEEKMCKNEKQPT-TCSSGADGQMVNELMDFCXXXXXXXXXXXX 1876
            SG L GE  V  D  P EE++C  EKQP  TCS   +    N+L D C            
Sbjct: 691  SGNLTGEKLVTPDTIPEEEELCVTEKQPIDTCSEDGNSHAANKLEDTCSGLAAHNVSGSA 750

Query: 1875 XXXXXXSFDNLLPNKLPEFCFADAQHDASQATLDANYCDTTDHGKLSAKDSTTDGDTARN 1696
                       L ++  +   ADAQH   QA  D + CDT   GK+S  DS TD D  ++
Sbjct: 751  FSSVIHE----LNDRALDSGSADAQH-MFQAASDDHACDTAKIGKISTDDSITDLDGVKD 805

Query: 1695 LAKDKVYGDSSIEKEELTRSPGFRDKDEEEHEVTKARLEDELLILGKEREELGSERRKLE 1516
            L K+K+YG+ S+EKEE TR+  F D D++E E+ +A LE+E+L LG EREELGSE+RKLE
Sbjct: 806  LGKEKIYGNFSMEKEETTRNSSFMD-DDKEQEIMEAHLEEEMLFLGIEREELGSEQRKLE 864

Query: 1515 RNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVLLFGA 1336
            RNAESVS+EMFAECQELLQMFG+PYIIAPMEAEAQCA+ME +NLVDGVVTDDSD  LFGA
Sbjct: 865  RNAESVSNEMFAECQELLQMFGIPYIIAPMEAEAQCAFMEQSNLVDGVVTDDSDAFLFGA 924

Query: 1335 RSVYKNIFDDRKYVETYFMKDIENELGLDREKLVRMALLLGSDYTEGVSGIGIVNAIEVV 1156
            RSVYKNIFDDRKYVETY MKDIENELGLDREKL+ MALLLGSDYTEG+SGIGIVNAIEVV
Sbjct: 925  RSVYKNIFDDRKYVETYLMKDIENELGLDREKLIHMALLLGSDYTEGISGIGIVNAIEVV 984

Query: 1155 NAFPEKDGLREFREWIESPDPTILGKFDVKEGSNSNKKVSKD-----GDSSSNTEGISTT 991
            NAFP+KDGLREFREWIESPDPTILGK DV+ G NS +K SK      G SSSNTEG S  
Sbjct: 985  NAFPKKDGLREFREWIESPDPTILGKLDVEAGGNSRRKGSKGSESMMGGSSSNTEGRS-C 1043

Query: 990  DQNGPHSVDDTQKIKQIFMDKHRNVSKNWHIPSSFPSDAVISAYTFPQVDNSTEPFSWGK 811
            DQ+ P  VD+ ++IKQIFMDKHRNVSKNWHIP++FPSDAVI AY  PQVD ST+PFSWGK
Sbjct: 1044 DQSEPQPVDEAKRIKQIFMDKHRNVSKNWHIPATFPSDAVILAYASPQVDKSTDPFSWGK 1103

Query: 810  PDLFVLRKLCWEKFGWGTSKADELLLPVLKEYNKHETQLRLEAFYTFNERFAKIRSRRIK 631
            PDLFVLRKLCWEKFGWG SK+DELLLPVLKEYNKHETQLRLEAFYTFNERFAKIRS+RIK
Sbjct: 1104 PDLFVLRKLCWEKFGWGMSKSDELLLPVLKEYNKHETQLRLEAFYTFNERFAKIRSKRIK 1163

Query: 630  KAVQGIAGKQSSRLMDDTVLQKSGSGKKRKVNPTDAEANRSGEGSTGLEKAGTGNLIDTV 451
            KAV+GI G++SS LMDDT  Q SGSGKKRKV P++ EAN+SG GS GL+  GT +  +T+
Sbjct: 1164 KAVKGITGEKSSDLMDDTTPQ-SGSGKKRKVRPSENEANQSGGGSEGLDGCGTSD--NTI 1220

Query: 450  EKITVKQSKGRQTKEKSNSKQF---TMVESCLKNSKKSNVXXXXXXXXXXXXXXXXXXNS 280
            +K TV++ KG QTKEK++ +     T V++ L   K+S++                  NS
Sbjct: 1221 KKTTVRRLKGGQTKEKTSRRNLELSTNVDNHLLTRKESHI-----RGHLSGKGRRKQRNS 1275

Query: 279  CSGDTETSSDAQSVSEKEQEMQFEKXXXXXXXXXXXXXRKVVSYTVSDEFDDPEKEGQEG 100
               DTET SD  + S  ++E Q +              RK V+YTV+D FD+ E   +E 
Sbjct: 1276 SGEDTETGSDDGTYSGSDKEKQLDISKESFQVRRSGRIRKTVNYTVADVFDNCE---EES 1332

Query: 99   ENC-DEDSIAKESFVDQADIGLAESNANE 16
             NC +E ++ KES +DQ    + +SN NE
Sbjct: 1333 PNCLEEGAVTKESLMDQVVGSVDKSNVNE 1361


>ref|XP_012849271.1| PREDICTED: DNA repair protein UVH3 isoform X2 [Erythranthe guttatus]
          Length = 1218

 Score =  783 bits (2021), Expect = 0.0
 Identities = 477/914 (52%), Positives = 588/914 (64%), Gaps = 16/914 (1%)
 Frame = -1

Query: 2748 AVKSGTSMEIAFEDIGEHGCGDDDGD-LFNRLVGEDPVMNFSIDNSVSVKQSLYSTSDCE 2572
            AV +G ++EI+FED+ E+ CG+DD D LF  LV    VM+FS+DNS S+KQS     DCE
Sbjct: 246  AVVNGNTIEISFEDLLENNCGNDDDDKLFACLVAGGSVMDFSVDNSASLKQSS-DADDCE 304

Query: 2571 ID-GVIQERGNVLSNDIKVVNEPSQMEGGMSDEDEVEWEEGSLDIPEKSSLCLDKSQKTF 2395
             + G+I+E+                 EGGMSDE E EW++G  +I  KSS C D+SQ+T 
Sbjct: 305  WEEGIIEEKSTACP-----------YEGGMSDEGEDEWKDGFQNIQMKSSSCPDESQRTV 353

Query: 2394 TKGSLEEEAEFQEAIRRSLEDMVDCRIINEPCEDEESRRAGEKVIKDIDWEPVHEDKNKP 2215
            TKG+LEEEA+FQEAIRRSLE  +D R + +  ED   R AGE V +             P
Sbjct: 354  TKGALEEEADFQEAIRRSLEGTMDIRSVIDFHEDNIFRSAGEMVCE-------------P 400

Query: 2214 EVEAPSEGFLQPPESPGIMNTSGTNSSKAKSVMYTVVDPGESNLEPNFWMQGKGGSGALP 2035
            EVE  S    QP +S    N   +N S+ K   +  ++  +SN +     +  G SGAL 
Sbjct: 401  EVEGVSANVSQPFQST---NAFESNCSEVKPAEFIELNHDKSNFDLKLSNKDAGESGALG 457

Query: 2034 GEMPVGSDAPLEEK-MCKNEKQP-TTCSSGADGQMVNELMDFCXXXXXXXXXXXXXXXXX 1861
            GE+P+ SD   + K +   +KQ   +C    +G  VNEL                     
Sbjct: 458  GEIPMSSDVVPDGKGLSVTDKQLFDSCGEDGNGHAVNEL-----ECNVEVAYNTVISASC 512

Query: 1860 XSFDNLLPNKLPEFCFADAQHDASQATLDANYCDTTDHGKLSAKDSTTDGDTARNLAKDK 1681
             +F + +  K       +AQ+  SQ  +  +   T    K+SA DS T  D  + LA + 
Sbjct: 513  SAFTDSVHGKTVVSGSTEAQN-MSQGAVHDHSGSTATLRKISADDSITVVDGTKELANEI 571

Query: 1680 VYGDSSIEKEELTRSPGFRDKDEEEHEVTKARLEDELLILGKEREELGSERRKLERNAES 1501
             +G+ S+EK+E+TR+    D D +EH++ + RLE+E+L L +ER+ELGSE+RK ERNAES
Sbjct: 572  FFGNFSMEKQEVTRNQSLFD-DNKEHDIVEDRLEEEMLFLSEERQELGSEQRKHERNAES 630

Query: 1500 VSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVLLFGARSVYK 1321
            V++EMFAECQELLQMFGLPYIIAPMEAEAQCA+MEL+NLVDGVVTDDSD  LFGAR+VYK
Sbjct: 631  VTNEMFAECQELLQMFGLPYIIAPMEAEAQCAFMELSNLVDGVVTDDSDAFLFGARNVYK 690

Query: 1320 NIFDDRKYVETYFMKDIENELGLDREKLVRMALLLGSDYTEGVSGIGIVNAIEVVNAFPE 1141
            NIFDDRKYVETY MKDIENELGLDREKL+RMALLLGSDYTEG+SGIGIVNAIEVVNAFP 
Sbjct: 691  NIFDDRKYVETYLMKDIENELGLDREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPG 750

Query: 1140 KDGLREFREWIESPDPTILGKFDVKEGSNSNKKVSK-----DGDSSSNTEGISTTDQNGP 976
            KDGLREFREWIESPDPTILG F+V+  +NS +K SK        S++N +GI  ++QN  
Sbjct: 751  KDGLREFREWIESPDPTILGNFNVEGSNNSRRKGSKGRENISSGSTNNLDGI-YSEQNLQ 809

Query: 975  HSVDDTQKIKQIFMDKHRNVSKNWHIPSSFPSDAVISAYTFPQVDNSTEPFSWGKPDLFV 796
              V D +++KQ FM KHRNVSKNWHI SSFPSDAVI+AY  PQVD STE  +WGKPDLFV
Sbjct: 810  QPVGDAERVKQTFMSKHRNVSKNWHISSSFPSDAVITAYASPQVDKSTESLAWGKPDLFV 869

Query: 795  LRKLCWEKFGWGTSKADELLLPVLKEYNKHETQLRLEAFYTFNERFAKIRSRRIKKAVQG 616
            LRKLCWEK GWGTSKADELLLPVLKEYNKHETQLRLEAFYTFNERFAKIRS+RIKKAV+G
Sbjct: 870  LRKLCWEKLGWGTSKADELLLPVLKEYNKHETQLRLEAFYTFNERFAKIRSKRIKKAVKG 929

Query: 615  IAGKQSSRLMDDTVL-QKSGSGKKRKVNP-TDAEANRSGEGSTGLEKAGTGNLIDTVEKI 442
            IAG +SS LMD+T L Q SGSGKKRKV P  + EA++SG        AGT N  +T +K 
Sbjct: 930  IAGHKSSELMDETPLPQNSGSGKKRKVKPFEEEEASQSG--------AGTQN--NTNDKP 979

Query: 441  TVKQSKGRQTKEK---SNSKQFTMVESCLKNSKKSNV--XXXXXXXXXXXXXXXXXXNSC 277
             VKQ K  + KEK   SN +Q T V       K+SNV                    NSC
Sbjct: 980  AVKQLKRGRAKEKTSDSNLEQSTSVR------KESNVRGRGRGRGRGRGRGRGKDTKNSC 1033

Query: 276  SGDTETSSDAQSVSEKEQEMQFEKXXXXXXXXXXXXXRKVVSYTVSDEFDDPEKEGQEGE 97
            S DT   S     SE ++E+QF+K             RK V YT  +EFD+ EK  ++  
Sbjct: 1034 SADTVNGS-----SESDEELQFDKSDESRLMRRSGRLRKAVDYTDPNEFDNHEKGSEDRH 1088

Query: 96   NCDEDSIAKESFVD 55
                + + + S V+
Sbjct: 1089 ESISNEVNRASDVE 1102


>ref|XP_012849263.1| PREDICTED: DNA repair protein UVH3 isoform X1 [Erythranthe guttatus]
          Length = 1436

 Score =  783 bits (2021), Expect = 0.0
 Identities = 477/914 (52%), Positives = 588/914 (64%), Gaps = 16/914 (1%)
 Frame = -1

Query: 2748 AVKSGTSMEIAFEDIGEHGCGDDDGD-LFNRLVGEDPVMNFSIDNSVSVKQSLYSTSDCE 2572
            AV +G ++EI+FED+ E+ CG+DD D LF  LV    VM+FS+DNS S+KQS     DCE
Sbjct: 464  AVVNGNTIEISFEDLLENNCGNDDDDKLFACLVAGGSVMDFSVDNSASLKQSS-DADDCE 522

Query: 2571 ID-GVIQERGNVLSNDIKVVNEPSQMEGGMSDEDEVEWEEGSLDIPEKSSLCLDKSQKTF 2395
             + G+I+E+                 EGGMSDE E EW++G  +I  KSS C D+SQ+T 
Sbjct: 523  WEEGIIEEKSTACP-----------YEGGMSDEGEDEWKDGFQNIQMKSSSCPDESQRTV 571

Query: 2394 TKGSLEEEAEFQEAIRRSLEDMVDCRIINEPCEDEESRRAGEKVIKDIDWEPVHEDKNKP 2215
            TKG+LEEEA+FQEAIRRSLE  +D R + +  ED   R AGE V +             P
Sbjct: 572  TKGALEEEADFQEAIRRSLEGTMDIRSVIDFHEDNIFRSAGEMVCE-------------P 618

Query: 2214 EVEAPSEGFLQPPESPGIMNTSGTNSSKAKSVMYTVVDPGESNLEPNFWMQGKGGSGALP 2035
            EVE  S    QP +S    N   +N S+ K   +  ++  +SN +     +  G SGAL 
Sbjct: 619  EVEGVSANVSQPFQST---NAFESNCSEVKPAEFIELNHDKSNFDLKLSNKDAGESGALG 675

Query: 2034 GEMPVGSDAPLEEK-MCKNEKQP-TTCSSGADGQMVNELMDFCXXXXXXXXXXXXXXXXX 1861
            GE+P+ SD   + K +   +KQ   +C    +G  VNEL                     
Sbjct: 676  GEIPMSSDVVPDGKGLSVTDKQLFDSCGEDGNGHAVNEL-----ECNVEVAYNTVISASC 730

Query: 1860 XSFDNLLPNKLPEFCFADAQHDASQATLDANYCDTTDHGKLSAKDSTTDGDTARNLAKDK 1681
             +F + +  K       +AQ+  SQ  +  +   T    K+SA DS T  D  + LA + 
Sbjct: 731  SAFTDSVHGKTVVSGSTEAQN-MSQGAVHDHSGSTATLRKISADDSITVVDGTKELANEI 789

Query: 1680 VYGDSSIEKEELTRSPGFRDKDEEEHEVTKARLEDELLILGKEREELGSERRKLERNAES 1501
             +G+ S+EK+E+TR+    D D +EH++ + RLE+E+L L +ER+ELGSE+RK ERNAES
Sbjct: 790  FFGNFSMEKQEVTRNQSLFD-DNKEHDIVEDRLEEEMLFLSEERQELGSEQRKHERNAES 848

Query: 1500 VSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVLLFGARSVYK 1321
            V++EMFAECQELLQMFGLPYIIAPMEAEAQCA+MEL+NLVDGVVTDDSD  LFGAR+VYK
Sbjct: 849  VTNEMFAECQELLQMFGLPYIIAPMEAEAQCAFMELSNLVDGVVTDDSDAFLFGARNVYK 908

Query: 1320 NIFDDRKYVETYFMKDIENELGLDREKLVRMALLLGSDYTEGVSGIGIVNAIEVVNAFPE 1141
            NIFDDRKYVETY MKDIENELGLDREKL+RMALLLGSDYTEG+SGIGIVNAIEVVNAFP 
Sbjct: 909  NIFDDRKYVETYLMKDIENELGLDREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPG 968

Query: 1140 KDGLREFREWIESPDPTILGKFDVKEGSNSNKKVSK-----DGDSSSNTEGISTTDQNGP 976
            KDGLREFREWIESPDPTILG F+V+  +NS +K SK        S++N +GI  ++QN  
Sbjct: 969  KDGLREFREWIESPDPTILGNFNVEGSNNSRRKGSKGRENISSGSTNNLDGI-YSEQNLQ 1027

Query: 975  HSVDDTQKIKQIFMDKHRNVSKNWHIPSSFPSDAVISAYTFPQVDNSTEPFSWGKPDLFV 796
              V D +++KQ FM KHRNVSKNWHI SSFPSDAVI+AY  PQVD STE  +WGKPDLFV
Sbjct: 1028 QPVGDAERVKQTFMSKHRNVSKNWHISSSFPSDAVITAYASPQVDKSTESLAWGKPDLFV 1087

Query: 795  LRKLCWEKFGWGTSKADELLLPVLKEYNKHETQLRLEAFYTFNERFAKIRSRRIKKAVQG 616
            LRKLCWEK GWGTSKADELLLPVLKEYNKHETQLRLEAFYTFNERFAKIRS+RIKKAV+G
Sbjct: 1088 LRKLCWEKLGWGTSKADELLLPVLKEYNKHETQLRLEAFYTFNERFAKIRSKRIKKAVKG 1147

Query: 615  IAGKQSSRLMDDTVL-QKSGSGKKRKVNP-TDAEANRSGEGSTGLEKAGTGNLIDTVEKI 442
            IAG +SS LMD+T L Q SGSGKKRKV P  + EA++SG        AGT N  +T +K 
Sbjct: 1148 IAGHKSSELMDETPLPQNSGSGKKRKVKPFEEEEASQSG--------AGTQN--NTNDKP 1197

Query: 441  TVKQSKGRQTKEK---SNSKQFTMVESCLKNSKKSNV--XXXXXXXXXXXXXXXXXXNSC 277
             VKQ K  + KEK   SN +Q T V       K+SNV                    NSC
Sbjct: 1198 AVKQLKRGRAKEKTSDSNLEQSTSVR------KESNVRGRGRGRGRGRGRGRGKDTKNSC 1251

Query: 276  SGDTETSSDAQSVSEKEQEMQFEKXXXXXXXXXXXXXRKVVSYTVSDEFDDPEKEGQEGE 97
            S DT   S     SE ++E+QF+K             RK V YT  +EFD+ EK  ++  
Sbjct: 1252 SADTVNGS-----SESDEELQFDKSDESRLMRRSGRLRKAVDYTDPNEFDNHEKGSEDRH 1306

Query: 96   NCDEDSIAKESFVD 55
                + + + S V+
Sbjct: 1307 ESISNEVNRASDVE 1320


>ref|XP_009588378.1| PREDICTED: DNA repair protein UVH3 isoform X2 [Nicotiana
            tomentosiformis]
          Length = 1385

 Score =  717 bits (1851), Expect = 0.0
 Identities = 432/919 (47%), Positives = 569/919 (61%), Gaps = 14/919 (1%)
 Frame = -1

Query: 2745 VKSGTSMEIAFEDIGEHGCGDDDGDLFNRLVGEDPVMNFSIDNSVSVKQSLYSTSDCEID 2566
            +KSGTS++I+FED   H C +DD D+F  LV  DP M FSID+S+S KQSL S SD E +
Sbjct: 306  LKSGTSIQISFEDNFAHDCANDDDDIFAHLVAGDPAMEFSIDHSLSKKQSLDSASDVEWE 365

Query: 2565 -GVIQERGNVLSNDIKVVNEPSQMEGGMSDEDEVEWEEGSLDIPEKSSLCLDKSQKTFTK 2389
             GVI+E+ ++LSN+ +  ++ +  + G+ DE EVEWEE  +DI ++ SL      +  +K
Sbjct: 366  EGVIEEKYDLLSNNSQGESQATLEKDGIDDEVEVEWEEECVDICKEPSL-FPFDSRIASK 424

Query: 2388 GSLEEEAEFQEAIRRSLEDMVDCRIINEPCEDEESRRAGEKVIKDIDWEPVHEDKNKPEV 2209
            G+LEEEA +QEA+RRSLED+ D R I++  E+E S  A + V + I      +D N P+ 
Sbjct: 425  GALEEEANYQEAVRRSLEDLRDHRCIDKSHENEMSEEAVQMVTQGIIIGSDGQDNNCPK- 483

Query: 2208 EAPSEGFLQPPESPGIMNTSGTNSSKAKSVMYTVVDPGESNLEPNFWMQGKGGSGALPGE 2029
               S   LQ  E P  + T+  + +    V  T +  G + L      Q +  SG    +
Sbjct: 484  ---SYEILQQKELPSEIQTAHLHDT----VHETDIAEGNNCLGNQLGEQFQANSGYRNMQ 536

Query: 2028 MPVGSDAPLEEKMCKNEKQPTTCSSGADGQMVNELMDFCXXXXXXXXXXXXXXXXXXSFD 1849
            +   +D       C     PT    G++  M+ + +                     S +
Sbjct: 537  IEEATDQADRNLHCDIRMGPTAPLDGSEVSMIRKKI---ADTTVEVSSNTKSAPDVTSIE 593

Query: 1848 NLLPNKLPEFCFADAQHDASQATLDANYCDTTDHGKLSAKDSTTDGDTARNLAKDKVYGD 1669
                N+LP    +DAQ   S A       ++T+  K   +   +D ++A+ L  +    D
Sbjct: 594  QARFNELPNARTSDAQQYESGAASHHYTHESTELAKAFTEGFISDTNSAQKLDDEGTCDD 653

Query: 1668 SSIEKEELTRSPGFRDK--DEEEHEVTKARLEDELLILGKEREELGSERRKLERNAESVS 1495
              +E ++L    G  D    +E+ +V    LE+E+ +L KERE+LG E+RKLERNAESVS
Sbjct: 654  PLLEGKDLF---GNLDSAGSKEDQKVMMTSLEEEMHVLDKEREKLGDEQRKLERNAESVS 710

Query: 1494 SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVLLFGARSVYKNI 1315
            SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEL NLVDGVVTDDSD  LFGAR+VYKNI
Sbjct: 711  SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELTNLVDGVVTDDSDAFLFGARNVYKNI 770

Query: 1314 FDDRKYVETYFMKDIENELGLDREKLVRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEKD 1135
            FDDRKYVETYFMKD+ENELGLDREK++RMAL LGSDYTEGVSGIGIVNAIEV+NAFPE+D
Sbjct: 771  FDDRKYVETYFMKDVENELGLDREKIIRMALFLGSDYTEGVSGIGIVNAIEVLNAFPEED 830

Query: 1134 GLREFREWIESPDPTILGKFDVKEGSNSNKKVSKDGD-----SSSNTEGISTTDQNGPHS 970
            GL++FREW+ESPDP+ILG  D +  S++ K+ S+ GD     SSSN EG S +D+N   S
Sbjct: 831  GLQKFREWVESPDPSILGGLDAQASSSTRKRGSEVGDPDMSCSSSNVEGNSASDEN-VKS 889

Query: 969  VDDTQKIKQIFMDKHRNVSKNWHIPSSFPSDAVISAYTFPQVDNSTEPFSWGKPDLFVLR 790
             D  QK+KQIFM+KHRN+SKNWHIPSSFPSDAVISAY  P+VD STEPF+WGKPD+ VLR
Sbjct: 890  EDRVQKLKQIFMNKHRNISKNWHIPSSFPSDAVISAYASPRVDKSTEPFAWGKPDVSVLR 949

Query: 789  KLCWEKFGWGTSKADELLLPVLKEYNKHETQLRLEAFYTFNERFAKIRSRRIKKAVQGIA 610
            K+CWEKFGW + KADELL+PVLKEYNKHETQLRLEAFYTFNERFAKIRS+RIKKAV+ + 
Sbjct: 950  KVCWEKFGWSSQKADELLVPVLKEYNKHETQLRLEAFYTFNERFAKIRSKRIKKAVKHMT 1009

Query: 609  GKQSSRLMDDTVLQKSGSGKKRKVNPTDAEANRSGEGSTGLEKAGTGNLIDTVEKITVKQ 430
            G +S  LMD +V    G+ KKR++   + E  +  +   GLE AG        E+   K+
Sbjct: 1010 GNKSMNLMDASVQDAPGTFKKRELKFNNVEEEKIEDPLMGLESAGA-----DYEETKTKR 1064

Query: 429  SKGRQT-KEKSNSKQFTMVE-----SCLKNSKKSNVXXXXXXXXXXXXXXXXXXNSCSGD 268
            S G+Q+ K K    Q   +E        +N+ K +                    SCS  
Sbjct: 1065 SVGKQSRKRKGEHLQPEHLEPPEGSGSKQNTNKKSSGGIGGGRKTARSAGKASKKSCSRS 1124

Query: 267  TETSSDAQSVSEKEQEMQFEKXXXXXXXXXXXXXRKVVSYTVSDEFDDPEKEGQEGENCD 88
             +TSS+    ++ EQ+ Q EK             RK+V+Y+   + D  + +  +G++  
Sbjct: 1125 FKTSSEGGKDNDIEQQSQIEKLEKPKQARRSERHRKIVNYSEVRDDDSDKVDKDDGDSTT 1184

Query: 87   EDSIAKESFVDQADIGLAE 31
            +    +ES    AD+G+AE
Sbjct: 1185 DKLERRES---GADVGIAE 1200


>ref|XP_009588377.1| PREDICTED: DNA repair protein UVH3 isoform X1 [Nicotiana
            tomentosiformis]
          Length = 1542

 Score =  717 bits (1851), Expect = 0.0
 Identities = 432/919 (47%), Positives = 569/919 (61%), Gaps = 14/919 (1%)
 Frame = -1

Query: 2745 VKSGTSMEIAFEDIGEHGCGDDDGDLFNRLVGEDPVMNFSIDNSVSVKQSLYSTSDCEID 2566
            +KSGTS++I+FED   H C +DD D+F  LV  DP M FSID+S+S KQSL S SD E +
Sbjct: 463  LKSGTSIQISFEDNFAHDCANDDDDIFAHLVAGDPAMEFSIDHSLSKKQSLDSASDVEWE 522

Query: 2565 -GVIQERGNVLSNDIKVVNEPSQMEGGMSDEDEVEWEEGSLDIPEKSSLCLDKSQKTFTK 2389
             GVI+E+ ++LSN+ +  ++ +  + G+ DE EVEWEE  +DI ++ SL      +  +K
Sbjct: 523  EGVIEEKYDLLSNNSQGESQATLEKDGIDDEVEVEWEEECVDICKEPSL-FPFDSRIASK 581

Query: 2388 GSLEEEAEFQEAIRRSLEDMVDCRIINEPCEDEESRRAGEKVIKDIDWEPVHEDKNKPEV 2209
            G+LEEEA +QEA+RRSLED+ D R I++  E+E S  A + V + I      +D N P+ 
Sbjct: 582  GALEEEANYQEAVRRSLEDLRDHRCIDKSHENEMSEEAVQMVTQGIIIGSDGQDNNCPK- 640

Query: 2208 EAPSEGFLQPPESPGIMNTSGTNSSKAKSVMYTVVDPGESNLEPNFWMQGKGGSGALPGE 2029
               S   LQ  E P  + T+  + +    V  T +  G + L      Q +  SG    +
Sbjct: 641  ---SYEILQQKELPSEIQTAHLHDT----VHETDIAEGNNCLGNQLGEQFQANSGYRNMQ 693

Query: 2028 MPVGSDAPLEEKMCKNEKQPTTCSSGADGQMVNELMDFCXXXXXXXXXXXXXXXXXXSFD 1849
            +   +D       C     PT    G++  M+ + +                     S +
Sbjct: 694  IEEATDQADRNLHCDIRMGPTAPLDGSEVSMIRKKI---ADTTVEVSSNTKSAPDVTSIE 750

Query: 1848 NLLPNKLPEFCFADAQHDASQATLDANYCDTTDHGKLSAKDSTTDGDTARNLAKDKVYGD 1669
                N+LP    +DAQ   S A       ++T+  K   +   +D ++A+ L  +    D
Sbjct: 751  QARFNELPNARTSDAQQYESGAASHHYTHESTELAKAFTEGFISDTNSAQKLDDEGTCDD 810

Query: 1668 SSIEKEELTRSPGFRDK--DEEEHEVTKARLEDELLILGKEREELGSERRKLERNAESVS 1495
              +E ++L    G  D    +E+ +V    LE+E+ +L KERE+LG E+RKLERNAESVS
Sbjct: 811  PLLEGKDLF---GNLDSAGSKEDQKVMMTSLEEEMHVLDKEREKLGDEQRKLERNAESVS 867

Query: 1494 SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVLLFGARSVYKNI 1315
            SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEL NLVDGVVTDDSD  LFGAR+VYKNI
Sbjct: 868  SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELTNLVDGVVTDDSDAFLFGARNVYKNI 927

Query: 1314 FDDRKYVETYFMKDIENELGLDREKLVRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEKD 1135
            FDDRKYVETYFMKD+ENELGLDREK++RMAL LGSDYTEGVSGIGIVNAIEV+NAFPE+D
Sbjct: 928  FDDRKYVETYFMKDVENELGLDREKIIRMALFLGSDYTEGVSGIGIVNAIEVLNAFPEED 987

Query: 1134 GLREFREWIESPDPTILGKFDVKEGSNSNKKVSKDGD-----SSSNTEGISTTDQNGPHS 970
            GL++FREW+ESPDP+ILG  D +  S++ K+ S+ GD     SSSN EG S +D+N   S
Sbjct: 988  GLQKFREWVESPDPSILGGLDAQASSSTRKRGSEVGDPDMSCSSSNVEGNSASDEN-VKS 1046

Query: 969  VDDTQKIKQIFMDKHRNVSKNWHIPSSFPSDAVISAYTFPQVDNSTEPFSWGKPDLFVLR 790
             D  QK+KQIFM+KHRN+SKNWHIPSSFPSDAVISAY  P+VD STEPF+WGKPD+ VLR
Sbjct: 1047 EDRVQKLKQIFMNKHRNISKNWHIPSSFPSDAVISAYASPRVDKSTEPFAWGKPDVSVLR 1106

Query: 789  KLCWEKFGWGTSKADELLLPVLKEYNKHETQLRLEAFYTFNERFAKIRSRRIKKAVQGIA 610
            K+CWEKFGW + KADELL+PVLKEYNKHETQLRLEAFYTFNERFAKIRS+RIKKAV+ + 
Sbjct: 1107 KVCWEKFGWSSQKADELLVPVLKEYNKHETQLRLEAFYTFNERFAKIRSKRIKKAVKHMT 1166

Query: 609  GKQSSRLMDDTVLQKSGSGKKRKVNPTDAEANRSGEGSTGLEKAGTGNLIDTVEKITVKQ 430
            G +S  LMD +V    G+ KKR++   + E  +  +   GLE AG        E+   K+
Sbjct: 1167 GNKSMNLMDASVQDAPGTFKKRELKFNNVEEEKIEDPLMGLESAGA-----DYEETKTKR 1221

Query: 429  SKGRQT-KEKSNSKQFTMVE-----SCLKNSKKSNVXXXXXXXXXXXXXXXXXXNSCSGD 268
            S G+Q+ K K    Q   +E        +N+ K +                    SCS  
Sbjct: 1222 SVGKQSRKRKGEHLQPEHLEPPEGSGSKQNTNKKSSGGIGGGRKTARSAGKASKKSCSRS 1281

Query: 267  TETSSDAQSVSEKEQEMQFEKXXXXXXXXXXXXXRKVVSYTVSDEFDDPEKEGQEGENCD 88
             +TSS+    ++ EQ+ Q EK             RK+V+Y+   + D  + +  +G++  
Sbjct: 1282 FKTSSEGGKDNDIEQQSQIEKLEKPKQARRSERHRKIVNYSEVRDDDSDKVDKDDGDSTT 1341

Query: 87   EDSIAKESFVDQADIGLAE 31
            +    +ES    AD+G+AE
Sbjct: 1342 DKLERRES---GADVGIAE 1357


>ref|XP_009801326.1| PREDICTED: DNA repair protein UVH3 [Nicotiana sylvestris]
          Length = 1543

 Score =  708 bits (1827), Expect = 0.0
 Identities = 432/940 (45%), Positives = 575/940 (61%), Gaps = 35/940 (3%)
 Frame = -1

Query: 2745 VKSGTSMEIAFEDIGEHGCG---DDDGDLFNRLVGEDPVMNFSIDNSVSVKQSLYSTSDC 2575
            +KSGTS++I+FED   H C    DDD D+F  LV  DP M FSID+S S KQSL S SD 
Sbjct: 463  LKSGTSIQISFEDNFAHNCANDDDDDDDIFAHLVAGDPAMEFSIDHSPSKKQSLDSASDV 522

Query: 2574 EID-GVIQERGNVLSNDIKVVNEPSQMEGGMSDEDEVEWEEGSLDIPEKSSLCLDKSQKT 2398
            E + G+I+E+ ++LSN+ +  ++ +  + GM DE EVEWEE  +DI ++ SL      ++
Sbjct: 523  EWEEGLIEEKRDLLSNNSQGESQATLEKDGMDDEVEVEWEEECVDICKERSL-FPFDSRS 581

Query: 2397 FTKGSLEEEAEFQEAIRRSLEDMVDCRIINEPCEDEESRRAGEKVIKDIDWEPVHEDKNK 2218
             +KG+LEEEA++QEA+RRSLED+ D R I++  E++ S  A + V   I      +D N 
Sbjct: 582  ASKGALEEEADYQEAVRRSLEDLRDHRCIDKSHENDMSEEASQMVTHGIVIGSDGQDNNC 641

Query: 2217 PEVEAPSEGFLQPPESPGIMNTSGTNSSKAKSVMYTVVDPGESNLEPNFWMQGKGGSG-- 2044
            P+        LQ  E P  + T+  + +    V  T +  G + L      Q +  SG  
Sbjct: 642  PKTHE----ILQQKELPSEIQTAHLHDT----VHETDIAEGNNCLGNQLGEQFQANSGYR 693

Query: 2043 -------------ALPGEMPVGSDAPL---EEKMCKNEKQPTTCSSGADGQMVNELMDFC 1912
                          L  ++ +G   PL   E +M +N+   TT    ++G+  +++    
Sbjct: 694  NMQIEEVTNQADRTLHCDIRMGPTDPLDGSEVRMIRNKIADTTVEVSSNGKSASDVTSI- 752

Query: 1911 XXXXXXXXXXXXXXXXXXSFDNLLPNKLPEFCFADAQHDASQATLDANYCDTTDHGKLSA 1732
                                +    N+LP    +DAQ   + A       ++T+  K   
Sbjct: 753  --------------------EQARFNELPNARTSDAQQYEAGAASHHYTHESTELAKAFT 792

Query: 1731 KDSTTDGDTARNLAKDKVYGDSSIEKEELTRSPGFRDK--DEEEHEVTKARLEDELLILG 1558
            +   +D ++A+ L ++    D  +E ++L    G  D    +E+ +V  A LE+E+ +L 
Sbjct: 793  EGFISDANSAQKLDEEGTCDDPLLEGKDLF---GNLDSAGSKEDQKVMMASLEEEMDVLD 849

Query: 1557 KEREELGSERRKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVD 1378
            KERE+LG E+RKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEL NLVD
Sbjct: 850  KEREKLGDEQRKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELTNLVD 909

Query: 1377 GVVTDDSDVLLFGARSVYKNIFDDRKYVETYFMKDIENELGLDREKLVRMALLLGSDYTE 1198
            GVVTDDSD  LFGAR+VYKNIFDDRKYVETYFMKD+ENELGLDREKL+R AL LGSDYTE
Sbjct: 910  GVVTDDSDAFLFGARNVYKNIFDDRKYVETYFMKDVENELGLDREKLIRTALFLGSDYTE 969

Query: 1197 GVSGIGIVNAIEVVNAFPEKDGLREFREWIESPDPTILGKFDVKEGSNSNKKVSKDGD-- 1024
            GVSGIGIVNAIEV+NAFPE+DGL++FREW+ESPDP+ILG  D + GS++ K+ S+ GD  
Sbjct: 970  GVSGIGIVNAIEVLNAFPEEDGLQKFREWVESPDPSILGGLDAQAGSSTRKRGSEVGDPD 1029

Query: 1023 ---SSSNTEGISTTDQNGPHSVDDTQKIKQIFMDKHRNVSKNWHIPSSFPSDAVISAYTF 853
               S SN EG S +D+N   S D  QK+KQIFM+KHRN+SKNWHIPSSFPSDAVISAY  
Sbjct: 1030 MSCSRSNVEGNSASDEN-VKSEDRVQKLKQIFMNKHRNISKNWHIPSSFPSDAVISAYAS 1088

Query: 852  PQVDNSTEPFSWGKPDLFVLRKLCWEKFGWGTSKADELLLPVLKEYNKHETQLRLEAFYT 673
            P+VD STEPF+WGKPD+ VLRK+CWEKFGW + KADELL+ VLKEYNKHETQLRLEAFYT
Sbjct: 1089 PRVDKSTEPFAWGKPDVSVLRKVCWEKFGWSSQKADELLVSVLKEYNKHETQLRLEAFYT 1148

Query: 672  FNERFAKIRSRRIKKAVQGIAGKQSSRLMDDTVLQKSGSGKKRKVNPTDAEANRSGEGST 493
            FNERFAKIRS+RIKKAV+ + G +S  LMD +V     + KKR++   + E  +  +  T
Sbjct: 1149 FNERFAKIRSKRIKKAVKLMTGNKSMNLMDASVQDAPENLKKRELKFNNVEEEKIEDPLT 1208

Query: 492  GLEKAGTGNLIDTVEKITVKQSKGRQT-KEKSNSKQFTMVE-----SCLKNSKKSNVXXX 331
            GLE AG        E+   K+S G+Q+ K K    Q   +E        +N+ K +    
Sbjct: 1209 GLESAGA-----DYEETKTKRSVGKQSRKRKGEHLQPEHLEPPEGSGSKQNTNKKSSGSI 1263

Query: 330  XXXXXXXXXXXXXXXNSCSGDTETSSDAQSVSEKEQEMQFEKXXXXXXXXXXXXXRKVVS 151
                            SCS   +TSS+ +  S+ EQ+ Q EK             RK+V+
Sbjct: 1264 RGGRKTARSVGKASKKSCSRSFKTSSEGEKDSDIEQQSQIEKLEKPKQARRSERHRKIVN 1323

Query: 150  YTVSDEFDDPEKEGQEGENCDEDSIAKESFVDQADIGLAE 31
            Y+   + +  + +  +G++  +    +ES    AD+G+ E
Sbjct: 1324 YSEGRDDESDKVDKDDGDSTTDKLERRES---GADVGIVE 1360


>ref|XP_006357146.1| PREDICTED: DNA repair protein UVH3-like isoform X2 [Solanum
            tuberosum]
          Length = 1517

 Score =  694 bits (1790), Expect = 0.0
 Identities = 429/928 (46%), Positives = 562/928 (60%), Gaps = 23/928 (2%)
 Frame = -1

Query: 2745 VKSGTSMEIAFEDIGEHGCGDDDGDLFNRLVGEDPVMNFSIDNSVSVKQSLYSTSDCEID 2566
            ++SGT+++I+FED  EH C +DD D+F  LV  DP M F +D+S S KQSL S SD E +
Sbjct: 462  LRSGTTIQISFEDNFEHDCANDDDDIFASLVAGDPGMEFPMDHSPSKKQSLDSASDVEWE 521

Query: 2565 -GVIQERGNVLSNDIKVVNEPSQMEGGMSDEDEVEWEEGSLDIPEKSSLCLDKSQKTFTK 2389
             GVI+E+G++LS++ +   +      GM DE EVEWEEG LDI E+  L L    ++  K
Sbjct: 522  EGVIEEKGDLLSSNSQGEGQAPLEIDGMDDEAEVEWEEGCLDICEEPPL-LPLDSRSAYK 580

Query: 2388 GSLEEEAEFQEAIRRSLEDMVDCRIINEPCEDEESRRAGEKVIKDIDWEPVHEDKNKPEV 2209
            G+LEEEA +QEA++RSLEDM D R I++  E E S  A +   + I  E V ++   P+V
Sbjct: 581  GALEEEANYQEAVKRSLEDMRDHRYIDKSHEKEMSEEAIQITAQGISIESVGQENYCPKV 640

Query: 2208 EAPSEGFLQPPESPGIMNTSGTNSSKAKSVMYTVVDPGESNLEPNFWMQGKGGSGALPGE 2029
                   LQ  + P  + T+  + +  +  +    +   ++L   F  Q   G G +  E
Sbjct: 641  HK----ILQQKDLPSEIQTADLHDTVHEMDIAGSNNSLGTHLGEQF--QANSGYGNMQIE 694

Query: 2028 MPVGS-DAPLE-EKM---------CKNEKQPTTCSSGADGQMVNELMDFCXXXXXXXXXX 1882
                  D  L+ EK          C    +PT    G++  M+ + +             
Sbjct: 695  KATSHPDRNLQIEKATSHTNRNLHCDIHMEPTIPLDGSEVDMIKKTIADTTVGVSSNNNT 754

Query: 1881 XXXXXXXXSFDNLLPNKLPEFCFADAQHDASQATLDANYCDTTDHGKLSAKDSTTDGDTA 1702
                       +   N+       DAQ   S A       +TT+  K   +  TTD ++A
Sbjct: 755  NSASDVTYIEQSTF-NESMNARTTDAQQYESGAAAHHYTQETTELTKAFTEGFTTDINSA 813

Query: 1701 RNLAKDKVYGDSSIEKEELTRSPGFRDKDEEEHEVTKARLEDELLILGKEREELGSERRK 1522
            +NL ++    D   E+ +   S   +    E+ +V  A LE+E+ +L ++RE+LG E+RK
Sbjct: 814  QNLDEEGACDDPLFERIDNLDSASTK----EDQKVMMASLEEEMHVLDEQREKLGDEQRK 869

Query: 1521 LERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVLLF 1342
            LERNA+SVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEL NLVDGVVTDDSD  LF
Sbjct: 870  LERNADSVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELTNLVDGVVTDDSDAFLF 929

Query: 1341 GARSVYKNIFDDRKYVETYFMKDIENELGLDREKLVRMALLLGSDYTEGVSGIGIVNAIE 1162
            GARSVYKNIFDDRKYVETYFMKD+ENELGLDREK++RMALLLGSDYTEGVSG+GIVNAIE
Sbjct: 930  GARSVYKNIFDDRKYVETYFMKDVENELGLDREKIIRMALLLGSDYTEGVSGVGIVNAIE 989

Query: 1161 VVNAFPEKDGLREFREWIESPDPTILGKFDVKEGSNSNKKVSKDGD-----SSSNTEGIS 997
            VVNAFPE+DGL++FREW+ESPDP+ILG  D + GS+S K+  K GD     S+SN EG +
Sbjct: 990  VVNAFPEEDGLQKFREWVESPDPSILGGLDAQTGSSSRKRGCKGGDPDMSCSTSNLEGNA 1049

Query: 996  TTDQNGPHSVDDTQKIKQIFMDKHRNVSKNWHIPSSFPSDAVISAYTFPQVDNSTEPFSW 817
             ++       D  +K++QIFM+KHRN+SKNWHIPSSFPS+AVISAYT P+VD STEPF+W
Sbjct: 1050 ASE-------DRAEKLRQIFMNKHRNISKNWHIPSSFPSNAVISAYTSPRVDKSTEPFAW 1102

Query: 816  GKPDLFVLRKLCWEKFGWGTSKADELLLPVLKEYNKHETQLRLEAFYTFNERFAKIRSRR 637
            GKPD+ VLRK+CWEKFGW + KADELL+PVLKEYNKHETQLRLEAFY+FNERFAKIRS+R
Sbjct: 1103 GKPDVSVLRKVCWEKFGWSSQKADELLVPVLKEYNKHETQLRLEAFYSFNERFAKIRSKR 1162

Query: 636  IKKAVQGIAGKQSSRLMDDTVLQKSGSGKKRKVNPTDAEANRSGEGSTGLEKAGTGNLID 457
            I KAV+ +   +SS LMD +     GS KKR V   D    +  +   GLE AG     D
Sbjct: 1163 INKAVKYMTVNKSSDLMDGSAQDAPGSCKKRVVKSNDMNEEKMEDPPRGLESAGA----D 1218

Query: 456  TVEKITVKQSKGRQT-KEKSNSKQFTMVE-----SCLKNSKKSNVXXXXXXXXXXXXXXX 295
              E  T ++S G+Q+ K K    Q   +E        +N+ K +                
Sbjct: 1219 YEETTTKRRSVGKQSRKRKGGLLQTEHLEPPEGAGSKRNTSKKSSGSIGGRKETARSVRK 1278

Query: 294  XXXNSCSGDTETSSDAQSVSEKEQEMQFEKXXXXXXXXXXXXXRKVVSYTVSDEFDDPEK 115
                S S  ++TSS+ +  S+ EQ+ Q EK             RK+V Y+   E  D E 
Sbjct: 1279 ASKKSSSRSSKTSSEGEKDSDIEQQSQIEKLEKPNQARRSQRHRKIVIYS---EKRDDEF 1335

Query: 114  EGQEGENCDEDSIAKESFVDQADIGLAE 31
            +  +G++  E    +ES    AD+ +AE
Sbjct: 1336 DKDDGDSTTEKLERRES---GADVDIAE 1360


>ref|XP_006357145.1| PREDICTED: DNA repair protein UVH3-like isoform X1 [Solanum
            tuberosum]
          Length = 1545

 Score =  694 bits (1790), Expect = 0.0
 Identities = 429/928 (46%), Positives = 562/928 (60%), Gaps = 23/928 (2%)
 Frame = -1

Query: 2745 VKSGTSMEIAFEDIGEHGCGDDDGDLFNRLVGEDPVMNFSIDNSVSVKQSLYSTSDCEID 2566
            ++SGT+++I+FED  EH C +DD D+F  LV  DP M F +D+S S KQSL S SD E +
Sbjct: 462  LRSGTTIQISFEDNFEHDCANDDDDIFASLVAGDPGMEFPMDHSPSKKQSLDSASDVEWE 521

Query: 2565 -GVIQERGNVLSNDIKVVNEPSQMEGGMSDEDEVEWEEGSLDIPEKSSLCLDKSQKTFTK 2389
             GVI+E+G++LS++ +   +      GM DE EVEWEEG LDI E+  L L    ++  K
Sbjct: 522  EGVIEEKGDLLSSNSQGEGQAPLEIDGMDDEAEVEWEEGCLDICEEPPL-LPLDSRSAYK 580

Query: 2388 GSLEEEAEFQEAIRRSLEDMVDCRIINEPCEDEESRRAGEKVIKDIDWEPVHEDKNKPEV 2209
            G+LEEEA +QEA++RSLEDM D R I++  E E S  A +   + I  E V ++   P+V
Sbjct: 581  GALEEEANYQEAVKRSLEDMRDHRYIDKSHEKEMSEEAIQITAQGISIESVGQENYCPKV 640

Query: 2208 EAPSEGFLQPPESPGIMNTSGTNSSKAKSVMYTVVDPGESNLEPNFWMQGKGGSGALPGE 2029
                   LQ  + P  + T+  + +  +  +    +   ++L   F  Q   G G +  E
Sbjct: 641  HK----ILQQKDLPSEIQTADLHDTVHEMDIAGSNNSLGTHLGEQF--QANSGYGNMQIE 694

Query: 2028 MPVGS-DAPLE-EKM---------CKNEKQPTTCSSGADGQMVNELMDFCXXXXXXXXXX 1882
                  D  L+ EK          C    +PT    G++  M+ + +             
Sbjct: 695  KATSHPDRNLQIEKATSHTNRNLHCDIHMEPTIPLDGSEVDMIKKTIADTTVGVSSNNNT 754

Query: 1881 XXXXXXXXSFDNLLPNKLPEFCFADAQHDASQATLDANYCDTTDHGKLSAKDSTTDGDTA 1702
                       +   N+       DAQ   S A       +TT+  K   +  TTD ++A
Sbjct: 755  NSASDVTYIEQSTF-NESMNARTTDAQQYESGAAAHHYTQETTELTKAFTEGFTTDINSA 813

Query: 1701 RNLAKDKVYGDSSIEKEELTRSPGFRDKDEEEHEVTKARLEDELLILGKEREELGSERRK 1522
            +NL ++    D   E+ +   S   +    E+ +V  A LE+E+ +L ++RE+LG E+RK
Sbjct: 814  QNLDEEGACDDPLFERIDNLDSASTK----EDQKVMMASLEEEMHVLDEQREKLGDEQRK 869

Query: 1521 LERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVLLF 1342
            LERNA+SVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEL NLVDGVVTDDSD  LF
Sbjct: 870  LERNADSVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELTNLVDGVVTDDSDAFLF 929

Query: 1341 GARSVYKNIFDDRKYVETYFMKDIENELGLDREKLVRMALLLGSDYTEGVSGIGIVNAIE 1162
            GARSVYKNIFDDRKYVETYFMKD+ENELGLDREK++RMALLLGSDYTEGVSG+GIVNAIE
Sbjct: 930  GARSVYKNIFDDRKYVETYFMKDVENELGLDREKIIRMALLLGSDYTEGVSGVGIVNAIE 989

Query: 1161 VVNAFPEKDGLREFREWIESPDPTILGKFDVKEGSNSNKKVSKDGD-----SSSNTEGIS 997
            VVNAFPE+DGL++FREW+ESPDP+ILG  D + GS+S K+  K GD     S+SN EG +
Sbjct: 990  VVNAFPEEDGLQKFREWVESPDPSILGGLDAQTGSSSRKRGCKGGDPDMSCSTSNLEGNA 1049

Query: 996  TTDQNGPHSVDDTQKIKQIFMDKHRNVSKNWHIPSSFPSDAVISAYTFPQVDNSTEPFSW 817
             ++       D  +K++QIFM+KHRN+SKNWHIPSSFPS+AVISAYT P+VD STEPF+W
Sbjct: 1050 ASE-------DRAEKLRQIFMNKHRNISKNWHIPSSFPSNAVISAYTSPRVDKSTEPFAW 1102

Query: 816  GKPDLFVLRKLCWEKFGWGTSKADELLLPVLKEYNKHETQLRLEAFYTFNERFAKIRSRR 637
            GKPD+ VLRK+CWEKFGW + KADELL+PVLKEYNKHETQLRLEAFY+FNERFAKIRS+R
Sbjct: 1103 GKPDVSVLRKVCWEKFGWSSQKADELLVPVLKEYNKHETQLRLEAFYSFNERFAKIRSKR 1162

Query: 636  IKKAVQGIAGKQSSRLMDDTVLQKSGSGKKRKVNPTDAEANRSGEGSTGLEKAGTGNLID 457
            I KAV+ +   +SS LMD +     GS KKR V   D    +  +   GLE AG     D
Sbjct: 1163 INKAVKYMTVNKSSDLMDGSAQDAPGSCKKRVVKSNDMNEEKMEDPPRGLESAGA----D 1218

Query: 456  TVEKITVKQSKGRQT-KEKSNSKQFTMVE-----SCLKNSKKSNVXXXXXXXXXXXXXXX 295
              E  T ++S G+Q+ K K    Q   +E        +N+ K +                
Sbjct: 1219 YEETTTKRRSVGKQSRKRKGGLLQTEHLEPPEGAGSKRNTSKKSSGSIGGRKETARSVRK 1278

Query: 294  XXXNSCSGDTETSSDAQSVSEKEQEMQFEKXXXXXXXXXXXXXRKVVSYTVSDEFDDPEK 115
                S S  ++TSS+ +  S+ EQ+ Q EK             RK+V Y+   E  D E 
Sbjct: 1279 ASKKSSSRSSKTSSEGEKDSDIEQQSQIEKLEKPNQARRSQRHRKIVIYS---EKRDDEF 1335

Query: 114  EGQEGENCDEDSIAKESFVDQADIGLAE 31
            +  +G++  E    +ES    AD+ +AE
Sbjct: 1336 DKDDGDSTTEKLERRES---GADVDIAE 1360


>ref|XP_010317093.1| PREDICTED: DNA repair protein UVH3 isoform X2 [Solanum lycopersicum]
          Length = 1333

 Score =  685 bits (1768), Expect = 0.0
 Identities = 429/921 (46%), Positives = 553/921 (60%), Gaps = 24/921 (2%)
 Frame = -1

Query: 2745 VKSGTSMEIAFEDIGEHGCGDDDGDLFNRLVGEDPVMNFSIDNSVSVKQSLYSTSDCEID 2566
            ++SGT+++I+FED  EH C +DD D+F  LV  DP M F +D+S S KQSL S SD E +
Sbjct: 256  LRSGTTIQISFEDNFEHDCANDDDDIFASLVAGDPTMEFLMDHSPSKKQSLDSASDVEWE 315

Query: 2565 -GVIQERGNVLSNDIKVVNEPSQMEGGMSDEDEVEWEEGSLDIPEKSSLCLDKSQKTFTK 2389
             GVI+++G++LSN+ +   +      GM DE EVEWEEG +DI E   L L    K+  K
Sbjct: 316  EGVIEKKGDLLSNNSQGERQAPLEIDGMDDEAEVEWEEGCVDICEDPPL-LPSDSKSAYK 374

Query: 2388 GSLEEEAEFQEAIRRSLEDMVDCRIINEPCEDEESRRAGEKVIKDIDWEPVHEDKNKPEV 2209
            G+LEEEA +QEA+RRSLEDM D R I++  E E S  A +   + I  E   ++   P V
Sbjct: 375  GALEEEANYQEAVRRSLEDMKDHRYIDKSHEKEMSEEAIQIAAQGISSESFGQENYCPTV 434

Query: 2208 EAPSEGFLQPPESPGIMNTSGTNSSKAKSVMYTVVDPGESNLEPNFWMQGKGGSGALPGE 2029
                   LQ  + P  + T+  + +  +  +        S++   F  Q   G G +  E
Sbjct: 435  HK----ILQQKDLPSEIQTADLHDTVHEMDIAGSNKSLGSHMGEQF--QANSGYGNMQIE 488

Query: 2028 MPVG-SDAPLE-EKM---------CKNEKQPTTCSSGADGQMVNELMDFCXXXXXXXXXX 1882
                 +D  L+ EK          C    +PT    G++  M  + +             
Sbjct: 489  KANSHADRNLQIEKATSHTNRNLHCDIHMEPTIPLDGSEVDMTKKKIADTTVGVSCNNNT 548

Query: 1881 XXXXXXXXSFDNLLPNKLPEFCFADAQHDASQATLDANYCDTTDHGKLSAKDSTTDGDTA 1702
                       + L N+       DAQ   S+A       +TT+  K   +  TTD ++A
Sbjct: 549  QSASDVTSIEQSTL-NESMNARTTDAQEYESEAAAHHYTHETTEITKAFTEGFTTDINSA 607

Query: 1701 RNLAKDKVYGDSSIEKEELTRSPGFRDKDEEEHEVTKARLEDELLILGKEREELGSERRK 1522
            +NL ++    D   E+     S   +    E+ +V  A LE+E+ +L KERE+LG E+RK
Sbjct: 608  QNLDEEGACDDPLFERIGNLDSASTK----EDQKVMMASLEEEMHVLDKEREKLGDEQRK 663

Query: 1521 LERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVLLF 1342
            LERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEL +LVDGVVTDDSD  LF
Sbjct: 664  LERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELTDLVDGVVTDDSDAFLF 723

Query: 1341 GARSVYKNIFDDRKYVETYFMKDIENELGLDREKLVRMALLLGSDYTEGVSGIGIVNAIE 1162
            GARSVYKNIFDDRKYVETYFMKD+E+ELGLDREK++RMALLLGSDYTEGVSGIGIVNAIE
Sbjct: 724  GARSVYKNIFDDRKYVETYFMKDVESELGLDREKIIRMALLLGSDYTEGVSGIGIVNAIE 783

Query: 1161 VVNAFPEKDGLREFREWIESPDPTILGKFDVKEGSNSNKKVSKDGD-----SSSNTEGIS 997
            VVNAFPE+DGL++FREW+ESPDP+ILG  D + GSNS K+  K GD     S+SN EG +
Sbjct: 784  VVNAFPEEDGLQKFREWVESPDPSILGGLDSQVGSNSRKRGCKGGDPDMSCSTSNLEGNA 843

Query: 996  TTDQNGPHSVDDTQKIKQIFMDKHRNVSKNWHIPSSFPSDAVISAYTFPQVDNSTEPFSW 817
             ++       D  +K +Q FM+KHRN+SKNWHIPSSFPS+AVISAYT P+VD STEPF+W
Sbjct: 844  ASE-------DRAEKSRQSFMNKHRNISKNWHIPSSFPSNAVISAYTSPRVDKSTEPFAW 896

Query: 816  GKPDLFVLRKLCWEKFGWGTSKADELLLPVLKEYNKHETQLRLEAFYTFNERFAKIRSRR 637
            GKPD+ VLRK+CWEKFGW + KADELL+PVLKEYNKHETQLRLEAFY+FNERFAKIRS+R
Sbjct: 897  GKPDVSVLRKVCWEKFGWSSQKADELLVPVLKEYNKHETQLRLEAFYSFNERFAKIRSKR 956

Query: 636  IKKAVQGIAGKQSSRLMDDTVLQKSGSGKKRKVNPTDAEANRSGEGSTGLEKAGTGNLID 457
            I KAV+ + G +SS LMD +     G  KKR V   D    +  +   G E AG      
Sbjct: 957  INKAVKYMTGNKSSDLMDGSAQDAPGICKKRVVKSNDMNEEKMEDPPRGHESAGA----- 1011

Query: 456  TVEKITVKQSKGRQT-KEKSNSKQFTMVE------SCLKNSKKSNVXXXXXXXXXXXXXX 298
              E+ T K+S G+Q+ K K    Q   +E      S    SKKS+               
Sbjct: 1012 DYEETTTKRSVGKQSRKRKGGHLQTEHLEPPEGAGSKRNTSKKSS--GSIGGRKETARSV 1069

Query: 297  XXXXNSCSGDTETSSDAQSVSEKEQEMQFEKXXXXXXXXXXXXXRKVVSYTVSDEFDDPE 118
                 + S  ++ SS+ +  S+ EQ+ Q EK             RK+V+Y+   E  D E
Sbjct: 1070 WKAGKNSSRSSKISSEGEKDSDIEQQSQIEKPEKTNQTRRSQRHRKIVNYS---EKRDDE 1126

Query: 117  KEGQEGENCDEDSIAKESFVD 55
             +  +G++  E    +E+ VD
Sbjct: 1127 SDKDDGDSTAEKLERREAGVD 1147


>ref|XP_004233336.1| PREDICTED: DNA repair protein UVH3 isoform X1 [Solanum lycopersicum]
          Length = 1539

 Score =  685 bits (1768), Expect = 0.0
 Identities = 429/921 (46%), Positives = 553/921 (60%), Gaps = 24/921 (2%)
 Frame = -1

Query: 2745 VKSGTSMEIAFEDIGEHGCGDDDGDLFNRLVGEDPVMNFSIDNSVSVKQSLYSTSDCEID 2566
            ++SGT+++I+FED  EH C +DD D+F  LV  DP M F +D+S S KQSL S SD E +
Sbjct: 462  LRSGTTIQISFEDNFEHDCANDDDDIFASLVAGDPTMEFLMDHSPSKKQSLDSASDVEWE 521

Query: 2565 -GVIQERGNVLSNDIKVVNEPSQMEGGMSDEDEVEWEEGSLDIPEKSSLCLDKSQKTFTK 2389
             GVI+++G++LSN+ +   +      GM DE EVEWEEG +DI E   L L    K+  K
Sbjct: 522  EGVIEKKGDLLSNNSQGERQAPLEIDGMDDEAEVEWEEGCVDICEDPPL-LPSDSKSAYK 580

Query: 2388 GSLEEEAEFQEAIRRSLEDMVDCRIINEPCEDEESRRAGEKVIKDIDWEPVHEDKNKPEV 2209
            G+LEEEA +QEA+RRSLEDM D R I++  E E S  A +   + I  E   ++   P V
Sbjct: 581  GALEEEANYQEAVRRSLEDMKDHRYIDKSHEKEMSEEAIQIAAQGISSESFGQENYCPTV 640

Query: 2208 EAPSEGFLQPPESPGIMNTSGTNSSKAKSVMYTVVDPGESNLEPNFWMQGKGGSGALPGE 2029
                   LQ  + P  + T+  + +  +  +        S++   F  Q   G G +  E
Sbjct: 641  HK----ILQQKDLPSEIQTADLHDTVHEMDIAGSNKSLGSHMGEQF--QANSGYGNMQIE 694

Query: 2028 MPVG-SDAPLE-EKM---------CKNEKQPTTCSSGADGQMVNELMDFCXXXXXXXXXX 1882
                 +D  L+ EK          C    +PT    G++  M  + +             
Sbjct: 695  KANSHADRNLQIEKATSHTNRNLHCDIHMEPTIPLDGSEVDMTKKKIADTTVGVSCNNNT 754

Query: 1881 XXXXXXXXSFDNLLPNKLPEFCFADAQHDASQATLDANYCDTTDHGKLSAKDSTTDGDTA 1702
                       + L N+       DAQ   S+A       +TT+  K   +  TTD ++A
Sbjct: 755  QSASDVTSIEQSTL-NESMNARTTDAQEYESEAAAHHYTHETTEITKAFTEGFTTDINSA 813

Query: 1701 RNLAKDKVYGDSSIEKEELTRSPGFRDKDEEEHEVTKARLEDELLILGKEREELGSERRK 1522
            +NL ++    D   E+     S   +    E+ +V  A LE+E+ +L KERE+LG E+RK
Sbjct: 814  QNLDEEGACDDPLFERIGNLDSASTK----EDQKVMMASLEEEMHVLDKEREKLGDEQRK 869

Query: 1521 LERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVLLF 1342
            LERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEL +LVDGVVTDDSD  LF
Sbjct: 870  LERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELTDLVDGVVTDDSDAFLF 929

Query: 1341 GARSVYKNIFDDRKYVETYFMKDIENELGLDREKLVRMALLLGSDYTEGVSGIGIVNAIE 1162
            GARSVYKNIFDDRKYVETYFMKD+E+ELGLDREK++RMALLLGSDYTEGVSGIGIVNAIE
Sbjct: 930  GARSVYKNIFDDRKYVETYFMKDVESELGLDREKIIRMALLLGSDYTEGVSGIGIVNAIE 989

Query: 1161 VVNAFPEKDGLREFREWIESPDPTILGKFDVKEGSNSNKKVSKDGD-----SSSNTEGIS 997
            VVNAFPE+DGL++FREW+ESPDP+ILG  D + GSNS K+  K GD     S+SN EG +
Sbjct: 990  VVNAFPEEDGLQKFREWVESPDPSILGGLDSQVGSNSRKRGCKGGDPDMSCSTSNLEGNA 1049

Query: 996  TTDQNGPHSVDDTQKIKQIFMDKHRNVSKNWHIPSSFPSDAVISAYTFPQVDNSTEPFSW 817
             ++       D  +K +Q FM+KHRN+SKNWHIPSSFPS+AVISAYT P+VD STEPF+W
Sbjct: 1050 ASE-------DRAEKSRQSFMNKHRNISKNWHIPSSFPSNAVISAYTSPRVDKSTEPFAW 1102

Query: 816  GKPDLFVLRKLCWEKFGWGTSKADELLLPVLKEYNKHETQLRLEAFYTFNERFAKIRSRR 637
            GKPD+ VLRK+CWEKFGW + KADELL+PVLKEYNKHETQLRLEAFY+FNERFAKIRS+R
Sbjct: 1103 GKPDVSVLRKVCWEKFGWSSQKADELLVPVLKEYNKHETQLRLEAFYSFNERFAKIRSKR 1162

Query: 636  IKKAVQGIAGKQSSRLMDDTVLQKSGSGKKRKVNPTDAEANRSGEGSTGLEKAGTGNLID 457
            I KAV+ + G +SS LMD +     G  KKR V   D    +  +   G E AG      
Sbjct: 1163 INKAVKYMTGNKSSDLMDGSAQDAPGICKKRVVKSNDMNEEKMEDPPRGHESAGA----- 1217

Query: 456  TVEKITVKQSKGRQT-KEKSNSKQFTMVE------SCLKNSKKSNVXXXXXXXXXXXXXX 298
              E+ T K+S G+Q+ K K    Q   +E      S    SKKS+               
Sbjct: 1218 DYEETTTKRSVGKQSRKRKGGHLQTEHLEPPEGAGSKRNTSKKSS--GSIGGRKETARSV 1275

Query: 297  XXXXNSCSGDTETSSDAQSVSEKEQEMQFEKXXXXXXXXXXXXXRKVVSYTVSDEFDDPE 118
                 + S  ++ SS+ +  S+ EQ+ Q EK             RK+V+Y+   E  D E
Sbjct: 1276 WKAGKNSSRSSKISSEGEKDSDIEQQSQIEKPEKTNQTRRSQRHRKIVNYS---EKRDDE 1332

Query: 117  KEGQEGENCDEDSIAKESFVD 55
             +  +G++  E    +E+ VD
Sbjct: 1333 SDKDDGDSTAEKLERREAGVD 1353


>emb|CDP02141.1| unnamed protein product [Coffea canephora]
          Length = 1523

 Score =  679 bits (1753), Expect = 0.0
 Identities = 404/776 (52%), Positives = 508/776 (65%), Gaps = 8/776 (1%)
 Frame = -1

Query: 2745 VKSGTSMEIAFEDIGEHGCGDDDGDLFNRLVGEDPVMNFSIDNSVSVKQSLYSTSDCEI- 2569
            + +GTSMEI+F+D G+H  G +D DLF  LV  DPVM FSI++S+S KQSL STS+ E  
Sbjct: 464  LNAGTSMEISFDDNGQHELGGEDDDLFAHLVAGDPVMEFSINDSLSKKQSLDSTSEPEWE 523

Query: 2568 DGVIQERGNVLSNDIKVVNEPSQMEGGMSDEDEVEWEEGSLDIPEKSSLCLDKSQKTFTK 2389
            DG I+      +N +K   +P  +  GM DE+++  E+GSL I E++S    +     +K
Sbjct: 524  DGDIEVEAGTSNNKLK--GKPL-LPDGMRDENDLGCEDGSLGIQEEASFS-GEYLDIVSK 579

Query: 2388 GSLEEEAEFQEAIRRSLEDMVDCRIINEPCEDEESRRAGEKVIKDIDWEPVHEDKNKPEV 2209
            G+LEEEA+ +EAIRRSL+D+ D R+++ P EDE+       V    +   +H++ +    
Sbjct: 580  GALEEEADLKEAIRRSLQDLDDQRLVDTPDEDEKCGATAAVVSLSRNSGFIHKEVDGKMS 639

Query: 2208 EAPSEGFLQPPESPGIMNTSGTNSSKAKSVMYTVVDPGESNLEPNFWMQGKGGSGALPGE 2029
            + PS    Q  ESP  +     N+    S +       + +L P  +++   G+  L  E
Sbjct: 640  QPPSTFNNQQHESPCHVQE---NTRSPDSNIVETNSSLDGHLTP--YLEVNYGTKDLLPE 694

Query: 2028 MPVGSDAPLEEKMCKNEKQPTTCSSGADGQMVNELMDFCXXXXXXXXXXXXXXXXXXSFD 1849
               GS  P  + + ++     T      G  V E                        F+
Sbjct: 695  KACGS-YPFVDPLMQDVSGNNTSHQEVCGTPVQE-------------------KDVSPFE 734

Query: 1848 NLLPNKLPEFCFADAQHDASQA--TLDANYCDTTDHGKLSAKDSTTDGDTARNLAKDKVY 1675
              L +   +   AD  H+ S+A   +D +   TT+    S KD   D  TA+   + +V+
Sbjct: 735  AQLASGTGDGIVADGLHNGSEAEAVVDGHLNRTTEIKGASLKDLMID--TAQQCREGEVH 792

Query: 1674 GDSSIEKEELTRSPGFRDKDEEEHEVTKARLEDELLILGKEREELGSERRKLERNAESVS 1495
                  +E L +      + EE      ARLE+E+L+LG+E+ ELG +++KLERNAESVS
Sbjct: 793  ---ECGEEHLGKDGSSYGRKEE------ARLEEEVLLLGEEQRELGDKQKKLERNAESVS 843

Query: 1494 SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVLLFGARSVYKNI 1315
            SEMFAECQELLQMFGLP+IIAPMEAEAQCA+MEL NLVDGVVTDDSD  LFGAR+V KNI
Sbjct: 844  SEMFAECQELLQMFGLPFIIAPMEAEAQCAFMELVNLVDGVVTDDSDAFLFGARNVCKNI 903

Query: 1314 FDDRKYVETYFMKDIENELGLDREKLVRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEKD 1135
            FDDRKYVETYFMKDIENELGL+REKL+ MALLLGSDYTEGVSGIGIVNAIEVVNAFPE+D
Sbjct: 904  FDDRKYVETYFMKDIENELGLNREKLIHMALLLGSDYTEGVSGIGIVNAIEVVNAFPEED 963

Query: 1134 GLREFREWIESPDPTILGKFDVKEGSNSNKKVSKDGDSSSNTE-----GISTTDQNGPHS 970
            GL  FREWIESPDP+ILGKFD++ GS+S +  S+ G++  N       G++  D +   S
Sbjct: 964  GLHRFREWIESPDPSILGKFDLQAGSSSKQIQSQVGETDMNCSDAKLGGVAARDADVSGS 1023

Query: 969  VDDTQKIKQIFMDKHRNVSKNWHIPSSFPSDAVISAYTFPQVDNSTEPFSWGKPDLFVLR 790
            VDDTQK+KQIFM+KHRNVSKNWHIPSSFPSDAVISAY+ PQVD STEPFSWGKPD FVLR
Sbjct: 1024 VDDTQKLKQIFMNKHRNVSKNWHIPSSFPSDAVISAYSSPQVDKSTEPFSWGKPDHFVLR 1083

Query: 789  KLCWEKFGWGTSKADELLLPVLKEYNKHETQLRLEAFYTFNERFAKIRSRRIKKAVQGIA 610
            KLCWEKFGW T KADELLLPVLKEYNK ETQLRLEAFYTFNERFAKIRS+RIKKAV+GI 
Sbjct: 1084 KLCWEKFGWSTQKADELLLPVLKEYNKRETQLRLEAFYTFNERFAKIRSKRIKKAVRGIT 1143

Query: 609  GKQSSRLMDDTVLQKSGSGKKRKVNPTDAEANRSGEGSTGLEKAGTGNLIDTVEKI 442
            GK+S  LMD++V     S KKR+ N   A  ++  E S+G E A  GN   T EK+
Sbjct: 1144 GKKSLDLMDESVQDGLRSKKKRRNNQDVAAGDKLEEASSGQEYADVGNEAKTTEKV 1199


>ref|XP_010660946.1| PREDICTED: DNA repair protein UVH3 isoform X2 [Vitis vinifera]
          Length = 1343

 Score =  662 bits (1707), Expect = 0.0
 Identities = 396/798 (49%), Positives = 502/798 (62%), Gaps = 20/798 (2%)
 Frame = -1

Query: 2739 SGTSMEIAFEDIGEHGCGDDDGDLFNRLVGEDPVMNFSIDNSVSVKQSLYSTSDCEID-G 2563
            +G S+EI+FED GEH C + D +LF  LV  +PV+  S D ++S ++   S SD + + G
Sbjct: 257  NGASIEISFEDDGEHNCLNGDDELFASLVAGNPVIISSSDAALSNRRPADSASDSDWEEG 316

Query: 2562 VIQERGNVLSNDIKVVNEPSQMEGGMSDEDEVEWEEGSLDIPEKSSLCLDKSQKTFTKGS 2383
            +I+E+G    +++ V  +PS ME  +SD+ EVEWEEG  D+ +  S C  K     +KG 
Sbjct: 317  IIEEKGGSCIDNVGVEIKPSVMEERVSDDSEVEWEEGPCDVSKNVSACPSKFGNPASKGR 376

Query: 2382 LEEEAEFQEAIRRSLEDMVDCRIINEPCEDEESRRAGEKVIKDIDWEPVHEDKNKPEVEA 2203
            LEEE + QEAIRRSLED+   + + E  +D + +   EKV  ++  +  H+  +K E + 
Sbjct: 377  LEEETDLQEAIRRSLEDLGGEKAVGESFKDSDIKEYDEKV-HEVKDDAFHKKNDKAEQDF 435

Query: 2202 PSEGFLQPPESPGIMNTSGTNSSKAKSVMYTVVDPGESNLEPNFWMQGKGGSGAL---PG 2032
            P E     PE  G       +  K   V+  +      N   +    G+  +  L   P 
Sbjct: 436  PLENL---PEQNG-------SFCKIVDVVEKLDSVDGMNTSQSIDASGRQLTSLLEDNPH 485

Query: 2031 EMPVGSDAPLEEKMCKNEKQPTTCSSGADGQMVNE-------LMDFCXXXXXXXXXXXXX 1873
            +M V     L  ++C+ E Q     SG  G+  NE       L                 
Sbjct: 486  KMEV-----LNNELCE-EYQKDVGESGNVGRETNEVYMIREQLSHASKKSVDTSTLANSC 539

Query: 1872 XXXXXSFDNLLPNKLPEFCFADAQHDASQATLDANYCDTTDHGKLSAKDSTTDGDTA--R 1699
                    + +   +P+   AD+    S+A    +  +TTD   +   ++   G TA  +
Sbjct: 540  SGDGSHISDAMLGNMPDATPADSSKYDSEAAPTWHSNETTDPA-IPPGETCIKGKTAVEQ 598

Query: 1698 NLAKDKVYGDSSIEKEELTRSPGFRDKDEEEHEVTKARLEDELLILGKEREELGSERRKL 1519
             LA+   + +  +EKE    +    DK   +  VT+  LE E++IL +E   LG E+RKL
Sbjct: 599  KLAEGNNHVNFFMEKERNMGNSVTEDKKNVQFGVTEDVLE-EMMILDQECLNLGDEQRKL 657

Query: 1518 ERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVLLFG 1339
            ERNA+ VSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDV LFG
Sbjct: 658  ERNADCVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFG 717

Query: 1338 ARSVYKNIFDDRKYVETYFMKDIENELGLDREKLVRMALLLGSDYTEGVSGIGIVNAIEV 1159
            ARSVYKNIFD+RKYVETYFMKDIE ELGL+REK++RMALLLGSDYTEGVSGIGIVNAIEV
Sbjct: 718  ARSVYKNIFDERKYVETYFMKDIETELGLNREKVIRMALLLGSDYTEGVSGIGIVNAIEV 777

Query: 1158 VNAFPEKDGLREFREWIESPDPTILGKFDVKEGSNSNKKVSK--DGDSSSNTEGISTTDQ 985
            +N+FPE+DGL +FREW+ESPDP ILGK +V+ GS+S K+ SK   GD S +   +   D+
Sbjct: 778  LNSFPEEDGLHKFREWVESPDPNILGKVNVETGSSSRKRGSKVGSGDQSHSKNNMDAFDE 837

Query: 984  N-----GPHSVDDTQKIKQIFMDKHRNVSKNWHIPSSFPSDAVISAYTFPQVDNSTEPFS 820
            N        SVDD Q  KQIFMDKHRNVSKNWHIPSSFPS+ VISAY  PQVD STEPFS
Sbjct: 838  NVSQNEHNESVDDIQSGKQIFMDKHRNVSKNWHIPSSFPSETVISAYASPQVDQSTEPFS 897

Query: 819  WGKPDLFVLRKLCWEKFGWGTSKADELLLPVLKEYNKHETQLRLEAFYTFNERFAKIRSR 640
            WGKPDLFVLRKLC EKFGWG  KADELLLPVLKEYNKHETQLRLEAFYTFNERFAKIRS+
Sbjct: 898  WGKPDLFVLRKLCLEKFGWGNQKADELLLPVLKEYNKHETQLRLEAFYTFNERFAKIRSK 957

Query: 639  RIKKAVQGIAGKQSSRLMDDTVLQKSGSGKKRKVNPTDAEANRSGEGSTGLEKAGTGNLI 460
            RIKKAV+GI G Q+S L+DD V + S  GK+ K +P+  + N+       +      N  
Sbjct: 958  RIKKAVKGITGSQTSELLDDAVQEGSKRGKRSKESPSKLD-NKQEIPINEIGSTAARNGS 1016

Query: 459  DTVEKITVKQSKGRQTKE 406
            +   K T KQS+ R+ ++
Sbjct: 1017 NATAKTTPKQSRRRRIRK 1034


>ref|XP_002275112.1| PREDICTED: DNA repair protein UVH3 isoform X1 [Vitis vinifera]
          Length = 1513

 Score =  662 bits (1707), Expect = 0.0
 Identities = 396/798 (49%), Positives = 502/798 (62%), Gaps = 20/798 (2%)
 Frame = -1

Query: 2739 SGTSMEIAFEDIGEHGCGDDDGDLFNRLVGEDPVMNFSIDNSVSVKQSLYSTSDCEID-G 2563
            +G S+EI+FED GEH C + D +LF  LV  +PV+  S D ++S ++   S SD + + G
Sbjct: 427  NGASIEISFEDDGEHNCLNGDDELFASLVAGNPVIISSSDAALSNRRPADSASDSDWEEG 486

Query: 2562 VIQERGNVLSNDIKVVNEPSQMEGGMSDEDEVEWEEGSLDIPEKSSLCLDKSQKTFTKGS 2383
            +I+E+G    +++ V  +PS ME  +SD+ EVEWEEG  D+ +  S C  K     +KG 
Sbjct: 487  IIEEKGGSCIDNVGVEIKPSVMEERVSDDSEVEWEEGPCDVSKNVSACPSKFGNPASKGR 546

Query: 2382 LEEEAEFQEAIRRSLEDMVDCRIINEPCEDEESRRAGEKVIKDIDWEPVHEDKNKPEVEA 2203
            LEEE + QEAIRRSLED+   + + E  +D + +   EKV  ++  +  H+  +K E + 
Sbjct: 547  LEEETDLQEAIRRSLEDLGGEKAVGESFKDSDIKEYDEKV-HEVKDDAFHKKNDKAEQDF 605

Query: 2202 PSEGFLQPPESPGIMNTSGTNSSKAKSVMYTVVDPGESNLEPNFWMQGKGGSGAL---PG 2032
            P E     PE  G       +  K   V+  +      N   +    G+  +  L   P 
Sbjct: 606  PLENL---PEQNG-------SFCKIVDVVEKLDSVDGMNTSQSIDASGRQLTSLLEDNPH 655

Query: 2031 EMPVGSDAPLEEKMCKNEKQPTTCSSGADGQMVNE-------LMDFCXXXXXXXXXXXXX 1873
            +M V     L  ++C+ E Q     SG  G+  NE       L                 
Sbjct: 656  KMEV-----LNNELCE-EYQKDVGESGNVGRETNEVYMIREQLSHASKKSVDTSTLANSC 709

Query: 1872 XXXXXSFDNLLPNKLPEFCFADAQHDASQATLDANYCDTTDHGKLSAKDSTTDGDTA--R 1699
                    + +   +P+   AD+    S+A    +  +TTD   +   ++   G TA  +
Sbjct: 710  SGDGSHISDAMLGNMPDATPADSSKYDSEAAPTWHSNETTDPA-IPPGETCIKGKTAVEQ 768

Query: 1698 NLAKDKVYGDSSIEKEELTRSPGFRDKDEEEHEVTKARLEDELLILGKEREELGSERRKL 1519
             LA+   + +  +EKE    +    DK   +  VT+  LE E++IL +E   LG E+RKL
Sbjct: 769  KLAEGNNHVNFFMEKERNMGNSVTEDKKNVQFGVTEDVLE-EMMILDQECLNLGDEQRKL 827

Query: 1518 ERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVLLFG 1339
            ERNA+ VSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDV LFG
Sbjct: 828  ERNADCVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFG 887

Query: 1338 ARSVYKNIFDDRKYVETYFMKDIENELGLDREKLVRMALLLGSDYTEGVSGIGIVNAIEV 1159
            ARSVYKNIFD+RKYVETYFMKDIE ELGL+REK++RMALLLGSDYTEGVSGIGIVNAIEV
Sbjct: 888  ARSVYKNIFDERKYVETYFMKDIETELGLNREKVIRMALLLGSDYTEGVSGIGIVNAIEV 947

Query: 1158 VNAFPEKDGLREFREWIESPDPTILGKFDVKEGSNSNKKVSK--DGDSSSNTEGISTTDQ 985
            +N+FPE+DGL +FREW+ESPDP ILGK +V+ GS+S K+ SK   GD S +   +   D+
Sbjct: 948  LNSFPEEDGLHKFREWVESPDPNILGKVNVETGSSSRKRGSKVGSGDQSHSKNNMDAFDE 1007

Query: 984  N-----GPHSVDDTQKIKQIFMDKHRNVSKNWHIPSSFPSDAVISAYTFPQVDNSTEPFS 820
            N        SVDD Q  KQIFMDKHRNVSKNWHIPSSFPS+ VISAY  PQVD STEPFS
Sbjct: 1008 NVSQNEHNESVDDIQSGKQIFMDKHRNVSKNWHIPSSFPSETVISAYASPQVDQSTEPFS 1067

Query: 819  WGKPDLFVLRKLCWEKFGWGTSKADELLLPVLKEYNKHETQLRLEAFYTFNERFAKIRSR 640
            WGKPDLFVLRKLC EKFGWG  KADELLLPVLKEYNKHETQLRLEAFYTFNERFAKIRS+
Sbjct: 1068 WGKPDLFVLRKLCLEKFGWGNQKADELLLPVLKEYNKHETQLRLEAFYTFNERFAKIRSK 1127

Query: 639  RIKKAVQGIAGKQSSRLMDDTVLQKSGSGKKRKVNPTDAEANRSGEGSTGLEKAGTGNLI 460
            RIKKAV+GI G Q+S L+DD V + S  GK+ K +P+  + N+       +      N  
Sbjct: 1128 RIKKAVKGITGSQTSELLDDAVQEGSKRGKRSKESPSKLD-NKQEIPINEIGSTAARNGS 1186

Query: 459  DTVEKITVKQSKGRQTKE 406
            +   K T KQS+ R+ ++
Sbjct: 1187 NATAKTTPKQSRRRRIRK 1204


>gb|EYU44715.1| hypothetical protein MIMGU_mgv1a000262mg [Erythranthe guttata]
          Length = 1337

 Score =  608 bits (1568), Expect = e-171
 Identities = 384/748 (51%), Positives = 466/748 (62%), Gaps = 14/748 (1%)
 Frame = -1

Query: 2256 DIDWEP-VHEDKNKPEVEAPSEGFL----QPPESPGIMNTSGTNSSKAKSVMYTVVDPGE 2092
            D +WE  + E+K+      P EG +    +     G  N    +SS       TV   G 
Sbjct: 524  DCEWEEGIIEEKS---TACPYEGGMSDEGEDEWKDGFQNIQMKSSSCPDESQRTVTK-GA 579

Query: 2091 SNLEPNFWMQGKGGSGALPGEMPVGSDAPLEEK-MCKNEKQP-TTCSSGADGQMVNELMD 1918
               E +F    +    AL GE+P+ SD   + K +   +KQ   +C    +G  VNEL  
Sbjct: 580  LEEEADFQEAIRRSLEALGGEIPMSSDVVPDGKGLSVTDKQLFDSCGEDGNGHAVNEL-- 637

Query: 1917 FCXXXXXXXXXXXXXXXXXXSFDNLLPNKLPEFCFADAQHDASQATLDANYCDTTDHGKL 1738
                                +F + +  K       +AQ+  SQ  +  +   T    K+
Sbjct: 638  ---ECNVEVAYNTVISASCSAFTDSVHGKTVVSGSTEAQN-MSQGAVHDHSGSTATLRKI 693

Query: 1737 SAKDSTTDGDTARNLAKDKVYGDSSIEKEELTRSPGFRDKDEEEHEVTKARLEDELLILG 1558
            SA DS T  D  + LA +  +G+ S+EK+E+TR+    D D +EH++ + RLE+E+L L 
Sbjct: 694  SADDSITVVDGTKELANEIFFGNFSMEKQEVTRNQSLFD-DNKEHDIVEDRLEEEMLFLS 752

Query: 1557 KEREELGSERRKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVD 1378
            +ER+ELGSE+RK ERNAESV++EMFAECQELLQMFGLPYIIAPMEAEAQCA+MEL+NLVD
Sbjct: 753  EERQELGSEQRKHERNAESVTNEMFAECQELLQMFGLPYIIAPMEAEAQCAFMELSNLVD 812

Query: 1377 GVVTDDSDVLLFGARSVYKNIFDDRKYVETYFMKDIENELGLDREKLVRMALLLGSDYTE 1198
            GVVTDDSD  LFGAR+VYKNIFDDRKYVETY MKDIENELGLDREKL+RMALLLGSDYTE
Sbjct: 813  GVVTDDSDAFLFGARNVYKNIFDDRKYVETYLMKDIENELGLDREKLIRMALLLGSDYTE 872

Query: 1197 GVSGIGIVNAIEVVNAFPEKDGLREFREWIESPDPTILGKFDVKEGSNSNKKVSKDGDSS 1018
            G+SGIGIVNAIEVVNAFP KDGLREFREWIESPDPTILG F+V+  +NS +K SK     
Sbjct: 873  GISGIGIVNAIEVVNAFPGKDGLREFREWIESPDPTILGNFNVEGSNNSRRKGSK----- 927

Query: 1017 SNTEGISTTDQNGPHSVDDTQKIKQIFMDKHRNVSKNWHIPSSFPSDAVISAYTFPQVDN 838
                G+       P S+        + +   RNVSKNWHI SSFPSDAVI+AY  PQVD 
Sbjct: 928  ----GLP------PFSLQVASFPAAVLV---RNVSKNWHISSSFPSDAVITAYASPQVDK 974

Query: 837  STEPFSWGKPDLFVLRKLCWEKFGWGTSKADELLLPVLKEYNKHETQLRLEAFYTFNERF 658
            STE  +WGKPDLFVLRKLCWEK GWGTSKADELLLPVLKEYNKHETQLRLEAFYTFNERF
Sbjct: 975  STESLAWGKPDLFVLRKLCWEKLGWGTSKADELLLPVLKEYNKHETQLRLEAFYTFNERF 1034

Query: 657  AKIRSRRIKKAVQGIAGKQSSRLMDDTVL-QKSGSGKKRKVNP-TDAEANRSGEGSTGLE 484
            AKIRS+RIKKAV+GIAG +SS LMD+T L Q SGSGKKRKV P  + EA++SG       
Sbjct: 1035 AKIRSKRIKKAVKGIAGHKSSELMDETPLPQNSGSGKKRKVKPFEEEEASQSG------- 1087

Query: 483  KAGTGNLIDTVEKITVKQSKGRQTKEK---SNSKQFTMVESCLKNSKKSNV--XXXXXXX 319
             AGT N  +T +K  VKQ K  + KEK   SN +Q T V       K+SNV         
Sbjct: 1088 -AGTQN--NTNDKPAVKQLKRGRAKEKTSDSNLEQSTSVR------KESNVRGRGRGRGR 1138

Query: 318  XXXXXXXXXXXNSCSGDTETSSDAQSVSEKEQEMQFEKXXXXXXXXXXXXXRKVVSYTVS 139
                       NSCS DT   S     SE ++E+QF+K             RK V YT  
Sbjct: 1139 GRGRGRGKDTKNSCSADTVNGS-----SESDEELQFDKSDESRLMRRSGRLRKAVDYTDP 1193

Query: 138  DEFDDPEKEGQEGENCDEDSIAKESFVD 55
            +EFD+ EK  ++      + + + S V+
Sbjct: 1194 NEFDNHEKGSEDRHESISNEVNRASDVE 1221



 Score =  125 bits (313), Expect = 2e-25
 Identities = 73/140 (52%), Positives = 94/140 (67%), Gaps = 2/140 (1%)
 Frame = -1

Query: 2748 AVKSGTSMEIAFEDIGEHGCGDDDGD-LFNRLVGEDPVMNFSIDNSVSVKQSLYSTSDCE 2572
            AV +G ++EI+FED+ E+ CG+DD D LF  LV    VM+FS+DNS S+KQS     DCE
Sbjct: 468  AVVNGNTIEISFEDLLENNCGNDDDDKLFACLVAGGSVMDFSVDNSASLKQSS-DADDCE 526

Query: 2571 ID-GVIQERGNVLSNDIKVVNEPSQMEGGMSDEDEVEWEEGSLDIPEKSSLCLDKSQKTF 2395
             + G+I+E+                 EGGMSDE E EW++G  +I  KSS C D+SQ+T 
Sbjct: 527  WEEGIIEEKSTACP-----------YEGGMSDEGEDEWKDGFQNIQMKSSSCPDESQRTV 575

Query: 2394 TKGSLEEEAEFQEAIRRSLE 2335
            TKG+LEEEA+FQEAIRRSLE
Sbjct: 576  TKGALEEEADFQEAIRRSLE 595


>ref|XP_007031407.1| DNA-repair protein UVH3, putative isoform 1 [Theobroma cacao]
            gi|508710436|gb|EOY02333.1| DNA-repair protein UVH3,
            putative isoform 1 [Theobroma cacao]
          Length = 1670

 Score =  576 bits (1485), Expect = e-161
 Identities = 330/601 (54%), Positives = 393/601 (65%), Gaps = 24/601 (3%)
 Frame = -1

Query: 1737 SAKDSTTDGDTARNLAKDKVYGDSSIEKEELTRSPGFRDKDEEEHEVTKARLEDELLILG 1558
            S   +T+D    + L  D+ Y +   E E+ T     +  D  + E T+  L++ELLILG
Sbjct: 918  SVNKATSDIHIEQELVGDRTYENYVNEAEQETDMANVKGNDYADVEFTQVSLDEELLILG 977

Query: 1557 KEREELGSERRKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVD 1378
            +E   LG E+RKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEL N+VD
Sbjct: 978  QECMNLGDEQRKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELTNIVD 1037

Query: 1377 GVVTDDSDVLLFGARSVYKNIFDDRKYVETYFMKDIENELGLDREKLVRMALLLGSDYTE 1198
            GVVTDDSDV LFGARSVYKNIFDDRKYVETYFM+DIE E+GL REKL+RMALLLGSDYTE
Sbjct: 1038 GVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKEIGLTREKLMRMALLLGSDYTE 1097

Query: 1197 GVSGIGIVNAIEVVNAFPEKDGLREFREWIESPDPTILGKFDVKEGSNSNKKVSKDG--- 1027
            GVSGIGIVNAIEVVNAFPE+DGL +FREWIESPDP ILGK +V+EGS++ K+ SK     
Sbjct: 1098 GVSGIGIVNAIEVVNAFPEEDGLHKFREWIESPDPAILGKLNVQEGSSARKRGSKFSDKD 1157

Query: 1026 ---------DSSSNTEGISTTDQN------GPHSVDDTQKIKQIFMDKHRNVSKNWHIPS 892
                     DS S  EG+S+ DQN         S D    IKQIFMDKHRNVSKNWHIPS
Sbjct: 1158 VISAKTSMRDSGSPIEGLSSFDQNISQADKNTQSTDCIDDIKQIFMDKHRNVSKNWHIPS 1217

Query: 891  SFPSDAVISAYTFPQVDNSTEPFSWGKPDLFVLRKLCWEKFGWGTSKADELLLPVLKEYN 712
            SFPS+AVIS Y  PQVD STEPF+WG+PDLFVLRKLCW+KFGWG+ K+D+LLLPVL+EY 
Sbjct: 1218 SFPSEAVISEYCSPQVDKSTEPFTWGRPDLFVLRKLCWDKFGWGSQKSDDLLLPVLREYE 1277

Query: 711  KHETQLRLEAFYTFNERFAKIRSRRIKKAVQGIAGKQSSRLMDDTVLQKSGSGKKRKVNP 532
            K ETQLRLEAFYTFNERFAKIRS+RIKKAV+GI G QSS L+DD + Q S S K+R+V+P
Sbjct: 1278 KRETQLRLEAFYTFNERFAKIRSKRIKKAVKGITGNQSSELIDDAMQQVSKSRKRRRVSP 1337

Query: 531  TDAEANRSGEGSTGLEKAGTGNLIDTVEKITVKQSKGRQTKE---KSNSKQFTMVESCLK 361
              +  ++SGE S   E   +     ++EK   K S+ R  +    KS  +Q        K
Sbjct: 1338 VKSGDDKSGEPSNWKEDIVSQRQSKSMEKSVPKPSRKRPPQTSPGKSTPEQPPRAARRRK 1397

Query: 360  NSKKSNVXXXXXXXXXXXXXXXXXXNSCSGD---TETSSDAQSVSEKEQEMQFEKXXXXX 190
             +K+S                       S D   +ETSS   +     QE+  EK     
Sbjct: 1398 TNKQS-----PGIGRRKGHGARRRRRKASPDFEQSETSSSGGNSGNDYQEVDGEKLDRPQ 1452

Query: 189  XXXXXXXXRKVVSYTVSDEFDDPEKEGQEGENCDEDSIAKESFVDQADIGLAESNANEVG 10
                    R  V+Y V+D  D+     +E       S  +E+   +A   L E N +E  
Sbjct: 1453 QVRRSMRTRNPVNYNVNDLEDEVGLSNKE-------SSCEEAMEQEAADDLNEENPSEAR 1505

Query: 9    D 7
            D
Sbjct: 1506 D 1506



 Score =  102 bits (255), Expect = 1e-18
 Identities = 67/163 (41%), Positives = 93/163 (57%), Gaps = 1/163 (0%)
 Frame = -1

Query: 2748 AVKSGTSMEIAFEDIGEHGCGDDDGDLFNRLVGEDPVMNFSIDNSVSVKQSLYSTSDCE- 2572
            A K+   MEI FED G +   DDD D+F RL   DPV   S +N  S K +  S SDCE 
Sbjct: 552  AFKTEACMEITFEDDGRNKFFDDDDDIFARLAAGDPVTLPSPENKPSGKHTSDSDSDCEW 611

Query: 2571 IDGVIQERGNVLSNDIKVVNEPSQMEGGMSDEDEVEWEEGSLDIPEKSSLCLDKSQKTFT 2392
             +G+ +   + +++ +   N PS  E  +SDE EVEWEE   D P+ SS  ++ S    +
Sbjct: 612  EEGMTEGNWDGVAHCMDAKNNPSYKESNISDESEVEWEEEPSDAPKSSSGPVE-SGVMLS 670

Query: 2391 KGSLEEEAEFQEAIRRSLEDMVDCRIINEPCEDEESRRAGEKV 2263
            KG LEEEA+ QEAIRRSL D+   +    P E E+ ++ G+ +
Sbjct: 671  KGYLEEEADLQEAIRRSLTDIGAKKSNYFPSEFEKLKKFGKNM 713


>ref|XP_012444069.1| PREDICTED: DNA repair protein UVH3 isoform X6 [Gossypium raimondii]
          Length = 1401

 Score =  572 bits (1475), Expect = e-160
 Identities = 323/581 (55%), Positives = 383/581 (65%), Gaps = 20/581 (3%)
 Frame = -1

Query: 1737 SAKDSTTDGDTARNLAKDKVYGDSSIEKEELTRSPGFRDKDEEEHEVTKARLEDELLILG 1558
            SA    +D    + L+ D  Y +   + E+ T     +  D EE + +KA L++ELLIL 
Sbjct: 612  SANKVISDLHIEQELSGDITYENCVNKAEQHTDMSTIKGNDNEEIKFSKASLDEELLILD 671

Query: 1557 KEREELGSERRKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVD 1378
            +E   +  E+RKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEL NLVD
Sbjct: 672  QECINMVDEQRKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELTNLVD 731

Query: 1377 GVVTDDSDVLLFGARSVYKNIFDDRKYVETYFMKDIENELGLDREKLVRMALLLGSDYTE 1198
            GVVTDDSDV LFGARSVYKNIFDDRKYVETYFM+DIE ELGL REKL+RMALLLGSDYTE
Sbjct: 732  GVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKELGLTREKLMRMALLLGSDYTE 791

Query: 1197 GVSGIGIVNAIEVVNAFPEKDGLREFREWIESPDPTILGKFDVKEGSNSNKKVSKDGD-- 1024
            GVSGIGIVNAIEVVNAFPE+DGL +FREWIESPDPTILGK +V+EGS++ K+  K  +  
Sbjct: 792  GVSGIGIVNAIEVVNAFPEEDGLHKFREWIESPDPTILGKLNVQEGSSARKRGPKSTEKD 851

Query: 1023 ---------SSSNTEGISTTDQN------GPHSVDDTQKIKQIFMDKHRNVSKNWHIPSS 889
                      S +  G S+ DQN         S D T  IKQIFMDKHRNVSKNWHIPSS
Sbjct: 852  VNGTKTSTRGSESNNGTSSLDQNSFQADKNMQSTDCTDDIKQIFMDKHRNVSKNWHIPSS 911

Query: 888  FPSDAVISAYTFPQVDNSTEPFSWGKPDLFVLRKLCWEKFGWGTSKADELLLPVLKEYNK 709
            FPS+AVISAY+ PQVD STEPF+WG+PDLFVLRKLCWEKFGWG+ K+DELLLPVL+E  K
Sbjct: 912  FPSEAVISAYSLPQVDKSTEPFTWGRPDLFVLRKLCWEKFGWGSQKSDELLLPVLRESEK 971

Query: 708  HETQLRLEAFYTFNERFAKIRSRRIKKAVQGIAGKQSSRLMDDTVLQKSGSGKKRKVNPT 529
             ETQLR+EAFYTFNERFAKIRS+RIKKAV+GI G QSS L+DD + Q S S +KR+ +P 
Sbjct: 972  RETQLRMEAFYTFNERFAKIRSKRIKKAVKGITGNQSSELIDDGMQQVSKSRRKRRASPV 1031

Query: 528  DAEANRSGEGSTGLEKAGTGNLIDTVEKITVKQSKGRQTKEKSNSKQFTMVESCLKNSKK 349
             +  ++SGE S   E   +     + +K   K S+ RQ+  K  S +    E  L+  ++
Sbjct: 1032 QSGDDKSGEPSNKKEDIASRCQSKSTDKSVPKTSRKRQSSGKDVSFEMRTPEPQLQTLRR 1091

Query: 348  SNVXXXXXXXXXXXXXXXXXXNSCSG---DTETSSDAQSVSEKEQEMQFEKXXXXXXXXX 178
                                    S      ETSS         QE+  EK         
Sbjct: 1092 RETNKQSAGNGRGRGGGEGRRRKGSSGFQQFETSSSGGDSGNVNQEVDGEKLDQPREVRR 1151

Query: 177  XXXXRKVVSYTVSDEFDDPEKEGQEGENCDEDSIAKESFVD 55
                R  V+YTV D  D+     +E     ED++ KE+  D
Sbjct: 1152 SMHTRNPVNYTVKDLEDEGGLSHKESSG--EDAMEKEAGED 1190



 Score = 83.2 bits (204), Expect = 1e-12
 Identities = 62/174 (35%), Positives = 96/174 (55%), Gaps = 1/174 (0%)
 Frame = -1

Query: 2748 AVKSGTSMEIAFEDIGEHGCGDDDGDLFNRLVGEDPVMNFSIDNSVSVKQSLYSTSDCEI 2569
            A ++ + MEI FED G+    DDD D+F RL   +PV   S +     KQ   S SD E 
Sbjct: 250  AFETESCMEITFEDDGKTEYFDDD-DIFARLAAGEPVTLPSPEEKSLRKQPSGSDSDFEW 308

Query: 2568 D-GVIQERGNVLSNDIKVVNEPSQMEGGMSDEDEVEWEEGSLDIPEKSSLCLDKSQKTFT 2392
            + GV++ + + ++  +   +     E  ++D+ EVEWEE   D P+ SS  ++ S +  +
Sbjct: 309  EEGVVEGKWDGVTPGMNAEHNLLNKESNITDDSEVEWEEEPSDAPKSSSGPVE-SGRMLS 367

Query: 2391 KGSLEEEAEFQEAIRRSLEDMVDCRIINEPCEDEESRRAGEKVIKDIDWEPVHE 2230
            KG  EEE++ QEAIRRSL D+   +  + P +  ES+  GE +  D D+  +HE
Sbjct: 368  KGYWEEESDLQEAIRRSLTDVGVEKSNSFPSDVIESKNLGENL--DEDFGSLHE 419


>ref|XP_012444060.1| PREDICTED: DNA repair protein UVH3 isoform X5 [Gossypium raimondii]
          Length = 1440

 Score =  572 bits (1475), Expect = e-160
 Identities = 323/581 (55%), Positives = 383/581 (65%), Gaps = 20/581 (3%)
 Frame = -1

Query: 1737 SAKDSTTDGDTARNLAKDKVYGDSSIEKEELTRSPGFRDKDEEEHEVTKARLEDELLILG 1558
            SA    +D    + L+ D  Y +   + E+ T     +  D EE + +KA L++ELLIL 
Sbjct: 651  SANKVISDLHIEQELSGDITYENCVNKAEQHTDMSTIKGNDNEEIKFSKASLDEELLILD 710

Query: 1557 KEREELGSERRKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVD 1378
            +E   +  E+RKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEL NLVD
Sbjct: 711  QECINMVDEQRKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELTNLVD 770

Query: 1377 GVVTDDSDVLLFGARSVYKNIFDDRKYVETYFMKDIENELGLDREKLVRMALLLGSDYTE 1198
            GVVTDDSDV LFGARSVYKNIFDDRKYVETYFM+DIE ELGL REKL+RMALLLGSDYTE
Sbjct: 771  GVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKELGLTREKLMRMALLLGSDYTE 830

Query: 1197 GVSGIGIVNAIEVVNAFPEKDGLREFREWIESPDPTILGKFDVKEGSNSNKKVSKDGD-- 1024
            GVSGIGIVNAIEVVNAFPE+DGL +FREWIESPDPTILGK +V+EGS++ K+  K  +  
Sbjct: 831  GVSGIGIVNAIEVVNAFPEEDGLHKFREWIESPDPTILGKLNVQEGSSARKRGPKSTEKD 890

Query: 1023 ---------SSSNTEGISTTDQN------GPHSVDDTQKIKQIFMDKHRNVSKNWHIPSS 889
                      S +  G S+ DQN         S D T  IKQIFMDKHRNVSKNWHIPSS
Sbjct: 891  VNGTKTSTRGSESNNGTSSLDQNSFQADKNMQSTDCTDDIKQIFMDKHRNVSKNWHIPSS 950

Query: 888  FPSDAVISAYTFPQVDNSTEPFSWGKPDLFVLRKLCWEKFGWGTSKADELLLPVLKEYNK 709
            FPS+AVISAY+ PQVD STEPF+WG+PDLFVLRKLCWEKFGWG+ K+DELLLPVL+E  K
Sbjct: 951  FPSEAVISAYSLPQVDKSTEPFTWGRPDLFVLRKLCWEKFGWGSQKSDELLLPVLRESEK 1010

Query: 708  HETQLRLEAFYTFNERFAKIRSRRIKKAVQGIAGKQSSRLMDDTVLQKSGSGKKRKVNPT 529
             ETQLR+EAFYTFNERFAKIRS+RIKKAV+GI G QSS L+DD + Q S S +KR+ +P 
Sbjct: 1011 RETQLRMEAFYTFNERFAKIRSKRIKKAVKGITGNQSSELIDDGMQQVSKSRRKRRASPV 1070

Query: 528  DAEANRSGEGSTGLEKAGTGNLIDTVEKITVKQSKGRQTKEKSNSKQFTMVESCLKNSKK 349
             +  ++SGE S   E   +     + +K   K S+ RQ+  K  S +    E  L+  ++
Sbjct: 1071 QSGDDKSGEPSNKKEDIASRCQSKSTDKSVPKTSRKRQSSGKDVSFEMRTPEPQLQTLRR 1130

Query: 348  SNVXXXXXXXXXXXXXXXXXXNSCSG---DTETSSDAQSVSEKEQEMQFEKXXXXXXXXX 178
                                    S      ETSS         QE+  EK         
Sbjct: 1131 RETNKQSAGNGRGRGGGEGRRRKGSSGFQQFETSSSGGDSGNVNQEVDGEKLDQPREVRR 1190

Query: 177  XXXXRKVVSYTVSDEFDDPEKEGQEGENCDEDSIAKESFVD 55
                R  V+YTV D  D+     +E     ED++ KE+  D
Sbjct: 1191 SMHTRNPVNYTVKDLEDEGGLSHKESSG--EDAMEKEAGED 1229



 Score = 83.2 bits (204), Expect = 1e-12
 Identities = 62/174 (35%), Positives = 96/174 (55%), Gaps = 1/174 (0%)
 Frame = -1

Query: 2748 AVKSGTSMEIAFEDIGEHGCGDDDGDLFNRLVGEDPVMNFSIDNSVSVKQSLYSTSDCEI 2569
            A ++ + MEI FED G+    DDD D+F RL   +PV   S +     KQ   S SD E 
Sbjct: 289  AFETESCMEITFEDDGKTEYFDDD-DIFARLAAGEPVTLPSPEEKSLRKQPSGSDSDFEW 347

Query: 2568 D-GVIQERGNVLSNDIKVVNEPSQMEGGMSDEDEVEWEEGSLDIPEKSSLCLDKSQKTFT 2392
            + GV++ + + ++  +   +     E  ++D+ EVEWEE   D P+ SS  ++ S +  +
Sbjct: 348  EEGVVEGKWDGVTPGMNAEHNLLNKESNITDDSEVEWEEEPSDAPKSSSGPVE-SGRMLS 406

Query: 2391 KGSLEEEAEFQEAIRRSLEDMVDCRIINEPCEDEESRRAGEKVIKDIDWEPVHE 2230
            KG  EEE++ QEAIRRSL D+   +  + P +  ES+  GE +  D D+  +HE
Sbjct: 407  KGYWEEESDLQEAIRRSLTDVGVEKSNSFPSDVIESKNLGENL--DEDFGSLHE 458


>ref|XP_012444053.1| PREDICTED: DNA repair protein UVH3 isoform X4 [Gossypium raimondii]
          Length = 1591

 Score =  572 bits (1475), Expect = e-160
 Identities = 323/581 (55%), Positives = 383/581 (65%), Gaps = 20/581 (3%)
 Frame = -1

Query: 1737 SAKDSTTDGDTARNLAKDKVYGDSSIEKEELTRSPGFRDKDEEEHEVTKARLEDELLILG 1558
            SA    +D    + L+ D  Y +   + E+ T     +  D EE + +KA L++ELLIL 
Sbjct: 802  SANKVISDLHIEQELSGDITYENCVNKAEQHTDMSTIKGNDNEEIKFSKASLDEELLILD 861

Query: 1557 KEREELGSERRKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVD 1378
            +E   +  E+RKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEL NLVD
Sbjct: 862  QECINMVDEQRKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELTNLVD 921

Query: 1377 GVVTDDSDVLLFGARSVYKNIFDDRKYVETYFMKDIENELGLDREKLVRMALLLGSDYTE 1198
            GVVTDDSDV LFGARSVYKNIFDDRKYVETYFM+DIE ELGL REKL+RMALLLGSDYTE
Sbjct: 922  GVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKELGLTREKLMRMALLLGSDYTE 981

Query: 1197 GVSGIGIVNAIEVVNAFPEKDGLREFREWIESPDPTILGKFDVKEGSNSNKKVSKDGD-- 1024
            GVSGIGIVNAIEVVNAFPE+DGL +FREWIESPDPTILGK +V+EGS++ K+  K  +  
Sbjct: 982  GVSGIGIVNAIEVVNAFPEEDGLHKFREWIESPDPTILGKLNVQEGSSARKRGPKSTEKD 1041

Query: 1023 ---------SSSNTEGISTTDQN------GPHSVDDTQKIKQIFMDKHRNVSKNWHIPSS 889
                      S +  G S+ DQN         S D T  IKQIFMDKHRNVSKNWHIPSS
Sbjct: 1042 VNGTKTSTRGSESNNGTSSLDQNSFQADKNMQSTDCTDDIKQIFMDKHRNVSKNWHIPSS 1101

Query: 888  FPSDAVISAYTFPQVDNSTEPFSWGKPDLFVLRKLCWEKFGWGTSKADELLLPVLKEYNK 709
            FPS+AVISAY+ PQVD STEPF+WG+PDLFVLRKLCWEKFGWG+ K+DELLLPVL+E  K
Sbjct: 1102 FPSEAVISAYSLPQVDKSTEPFTWGRPDLFVLRKLCWEKFGWGSQKSDELLLPVLRESEK 1161

Query: 708  HETQLRLEAFYTFNERFAKIRSRRIKKAVQGIAGKQSSRLMDDTVLQKSGSGKKRKVNPT 529
             ETQLR+EAFYTFNERFAKIRS+RIKKAV+GI G QSS L+DD + Q S S +KR+ +P 
Sbjct: 1162 RETQLRMEAFYTFNERFAKIRSKRIKKAVKGITGNQSSELIDDGMQQVSKSRRKRRASPV 1221

Query: 528  DAEANRSGEGSTGLEKAGTGNLIDTVEKITVKQSKGRQTKEKSNSKQFTMVESCLKNSKK 349
             +  ++SGE S   E   +     + +K   K S+ RQ+  K  S +    E  L+  ++
Sbjct: 1222 QSGDDKSGEPSNKKEDIASRCQSKSTDKSVPKTSRKRQSSGKDVSFEMRTPEPQLQTLRR 1281

Query: 348  SNVXXXXXXXXXXXXXXXXXXNSCSG---DTETSSDAQSVSEKEQEMQFEKXXXXXXXXX 178
                                    S      ETSS         QE+  EK         
Sbjct: 1282 RETNKQSAGNGRGRGGGEGRRRKGSSGFQQFETSSSGGDSGNVNQEVDGEKLDQPREVRR 1341

Query: 177  XXXXRKVVSYTVSDEFDDPEKEGQEGENCDEDSIAKESFVD 55
                R  V+YTV D  D+     +E     ED++ KE+  D
Sbjct: 1342 SMHTRNPVNYTVKDLEDEGGLSHKESSG--EDAMEKEAGED 1380



 Score = 83.2 bits (204), Expect = 1e-12
 Identities = 62/174 (35%), Positives = 96/174 (55%), Gaps = 1/174 (0%)
 Frame = -1

Query: 2748 AVKSGTSMEIAFEDIGEHGCGDDDGDLFNRLVGEDPVMNFSIDNSVSVKQSLYSTSDCEI 2569
            A ++ + MEI FED G+    DDD D+F RL   +PV   S +     KQ   S SD E 
Sbjct: 440  AFETESCMEITFEDDGKTEYFDDD-DIFARLAAGEPVTLPSPEEKSLRKQPSGSDSDFEW 498

Query: 2568 D-GVIQERGNVLSNDIKVVNEPSQMEGGMSDEDEVEWEEGSLDIPEKSSLCLDKSQKTFT 2392
            + GV++ + + ++  +   +     E  ++D+ EVEWEE   D P+ SS  ++ S +  +
Sbjct: 499  EEGVVEGKWDGVTPGMNAEHNLLNKESNITDDSEVEWEEEPSDAPKSSSGPVE-SGRMLS 557

Query: 2391 KGSLEEEAEFQEAIRRSLEDMVDCRIINEPCEDEESRRAGEKVIKDIDWEPVHE 2230
            KG  EEE++ QEAIRRSL D+   +  + P +  ES+  GE +  D D+  +HE
Sbjct: 558  KGYWEEESDLQEAIRRSLTDVGVEKSNSFPSDVIESKNLGENL--DEDFGSLHE 609


>ref|XP_012444044.1| PREDICTED: DNA repair protein UVH3 isoform X3 [Gossypium raimondii]
          Length = 1706

 Score =  572 bits (1475), Expect = e-160
 Identities = 323/581 (55%), Positives = 383/581 (65%), Gaps = 20/581 (3%)
 Frame = -1

Query: 1737 SAKDSTTDGDTARNLAKDKVYGDSSIEKEELTRSPGFRDKDEEEHEVTKARLEDELLILG 1558
            SA    +D    + L+ D  Y +   + E+ T     +  D EE + +KA L++ELLIL 
Sbjct: 917  SANKVISDLHIEQELSGDITYENCVNKAEQHTDMSTIKGNDNEEIKFSKASLDEELLILD 976

Query: 1557 KEREELGSERRKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVD 1378
            +E   +  E+RKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEL NLVD
Sbjct: 977  QECINMVDEQRKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELTNLVD 1036

Query: 1377 GVVTDDSDVLLFGARSVYKNIFDDRKYVETYFMKDIENELGLDREKLVRMALLLGSDYTE 1198
            GVVTDDSDV LFGARSVYKNIFDDRKYVETYFM+DIE ELGL REKL+RMALLLGSDYTE
Sbjct: 1037 GVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKELGLTREKLMRMALLLGSDYTE 1096

Query: 1197 GVSGIGIVNAIEVVNAFPEKDGLREFREWIESPDPTILGKFDVKEGSNSNKKVSKDGD-- 1024
            GVSGIGIVNAIEVVNAFPE+DGL +FREWIESPDPTILGK +V+EGS++ K+  K  +  
Sbjct: 1097 GVSGIGIVNAIEVVNAFPEEDGLHKFREWIESPDPTILGKLNVQEGSSARKRGPKSTEKD 1156

Query: 1023 ---------SSSNTEGISTTDQN------GPHSVDDTQKIKQIFMDKHRNVSKNWHIPSS 889
                      S +  G S+ DQN         S D T  IKQIFMDKHRNVSKNWHIPSS
Sbjct: 1157 VNGTKTSTRGSESNNGTSSLDQNSFQADKNMQSTDCTDDIKQIFMDKHRNVSKNWHIPSS 1216

Query: 888  FPSDAVISAYTFPQVDNSTEPFSWGKPDLFVLRKLCWEKFGWGTSKADELLLPVLKEYNK 709
            FPS+AVISAY+ PQVD STEPF+WG+PDLFVLRKLCWEKFGWG+ K+DELLLPVL+E  K
Sbjct: 1217 FPSEAVISAYSLPQVDKSTEPFTWGRPDLFVLRKLCWEKFGWGSQKSDELLLPVLRESEK 1276

Query: 708  HETQLRLEAFYTFNERFAKIRSRRIKKAVQGIAGKQSSRLMDDTVLQKSGSGKKRKVNPT 529
             ETQLR+EAFYTFNERFAKIRS+RIKKAV+GI G QSS L+DD + Q S S +KR+ +P 
Sbjct: 1277 RETQLRMEAFYTFNERFAKIRSKRIKKAVKGITGNQSSELIDDGMQQVSKSRRKRRASPV 1336

Query: 528  DAEANRSGEGSTGLEKAGTGNLIDTVEKITVKQSKGRQTKEKSNSKQFTMVESCLKNSKK 349
             +  ++SGE S   E   +     + +K   K S+ RQ+  K  S +    E  L+  ++
Sbjct: 1337 QSGDDKSGEPSNKKEDIASRCQSKSTDKSVPKTSRKRQSSGKDVSFEMRTPEPQLQTLRR 1396

Query: 348  SNVXXXXXXXXXXXXXXXXXXNSCSG---DTETSSDAQSVSEKEQEMQFEKXXXXXXXXX 178
                                    S      ETSS         QE+  EK         
Sbjct: 1397 RETNKQSAGNGRGRGGGEGRRRKGSSGFQQFETSSSGGDSGNVNQEVDGEKLDQPREVRR 1456

Query: 177  XXXXRKVVSYTVSDEFDDPEKEGQEGENCDEDSIAKESFVD 55
                R  V+YTV D  D+     +E     ED++ KE+  D
Sbjct: 1457 SMHTRNPVNYTVKDLEDEGGLSHKESSG--EDAMEKEAGED 1495



 Score = 83.2 bits (204), Expect = 1e-12
 Identities = 62/174 (35%), Positives = 96/174 (55%), Gaps = 1/174 (0%)
 Frame = -1

Query: 2748 AVKSGTSMEIAFEDIGEHGCGDDDGDLFNRLVGEDPVMNFSIDNSVSVKQSLYSTSDCEI 2569
            A ++ + MEI FED G+    DDD D+F RL   +PV   S +     KQ   S SD E 
Sbjct: 555  AFETESCMEITFEDDGKTEYFDDD-DIFARLAAGEPVTLPSPEEKSLRKQPSGSDSDFEW 613

Query: 2568 D-GVIQERGNVLSNDIKVVNEPSQMEGGMSDEDEVEWEEGSLDIPEKSSLCLDKSQKTFT 2392
            + GV++ + + ++  +   +     E  ++D+ EVEWEE   D P+ SS  ++ S +  +
Sbjct: 614  EEGVVEGKWDGVTPGMNAEHNLLNKESNITDDSEVEWEEEPSDAPKSSSGPVE-SGRMLS 672

Query: 2391 KGSLEEEAEFQEAIRRSLEDMVDCRIINEPCEDEESRRAGEKVIKDIDWEPVHE 2230
            KG  EEE++ QEAIRRSL D+   +  + P +  ES+  GE +  D D+  +HE
Sbjct: 673  KGYWEEESDLQEAIRRSLTDVGVEKSNSFPSDVIESKNLGENL--DEDFGSLHE 724


>ref|XP_012444035.1| PREDICTED: DNA repair protein UVH3 isoform X2 [Gossypium raimondii]
          Length = 1707

 Score =  572 bits (1475), Expect = e-160
 Identities = 323/581 (55%), Positives = 383/581 (65%), Gaps = 20/581 (3%)
 Frame = -1

Query: 1737 SAKDSTTDGDTARNLAKDKVYGDSSIEKEELTRSPGFRDKDEEEHEVTKARLEDELLILG 1558
            SA    +D    + L+ D  Y +   + E+ T     +  D EE + +KA L++ELLIL 
Sbjct: 918  SANKVISDLHIEQELSGDITYENCVNKAEQHTDMSTIKGNDNEEIKFSKASLDEELLILD 977

Query: 1557 KEREELGSERRKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVD 1378
            +E   +  E+RKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEL NLVD
Sbjct: 978  QECINMVDEQRKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELTNLVD 1037

Query: 1377 GVVTDDSDVLLFGARSVYKNIFDDRKYVETYFMKDIENELGLDREKLVRMALLLGSDYTE 1198
            GVVTDDSDV LFGARSVYKNIFDDRKYVETYFM+DIE ELGL REKL+RMALLLGSDYTE
Sbjct: 1038 GVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKELGLTREKLMRMALLLGSDYTE 1097

Query: 1197 GVSGIGIVNAIEVVNAFPEKDGLREFREWIESPDPTILGKFDVKEGSNSNKKVSKDGD-- 1024
            GVSGIGIVNAIEVVNAFPE+DGL +FREWIESPDPTILGK +V+EGS++ K+  K  +  
Sbjct: 1098 GVSGIGIVNAIEVVNAFPEEDGLHKFREWIESPDPTILGKLNVQEGSSARKRGPKSTEKD 1157

Query: 1023 ---------SSSNTEGISTTDQN------GPHSVDDTQKIKQIFMDKHRNVSKNWHIPSS 889
                      S +  G S+ DQN         S D T  IKQIFMDKHRNVSKNWHIPSS
Sbjct: 1158 VNGTKTSTRGSESNNGTSSLDQNSFQADKNMQSTDCTDDIKQIFMDKHRNVSKNWHIPSS 1217

Query: 888  FPSDAVISAYTFPQVDNSTEPFSWGKPDLFVLRKLCWEKFGWGTSKADELLLPVLKEYNK 709
            FPS+AVISAY+ PQVD STEPF+WG+PDLFVLRKLCWEKFGWG+ K+DELLLPVL+E  K
Sbjct: 1218 FPSEAVISAYSLPQVDKSTEPFTWGRPDLFVLRKLCWEKFGWGSQKSDELLLPVLRESEK 1277

Query: 708  HETQLRLEAFYTFNERFAKIRSRRIKKAVQGIAGKQSSRLMDDTVLQKSGSGKKRKVNPT 529
             ETQLR+EAFYTFNERFAKIRS+RIKKAV+GI G QSS L+DD + Q S S +KR+ +P 
Sbjct: 1278 RETQLRMEAFYTFNERFAKIRSKRIKKAVKGITGNQSSELIDDGMQQVSKSRRKRRASPV 1337

Query: 528  DAEANRSGEGSTGLEKAGTGNLIDTVEKITVKQSKGRQTKEKSNSKQFTMVESCLKNSKK 349
             +  ++SGE S   E   +     + +K   K S+ RQ+  K  S +    E  L+  ++
Sbjct: 1338 QSGDDKSGEPSNKKEDIASRCQSKSTDKSVPKTSRKRQSSGKDVSFEMRTPEPQLQTLRR 1397

Query: 348  SNVXXXXXXXXXXXXXXXXXXNSCSG---DTETSSDAQSVSEKEQEMQFEKXXXXXXXXX 178
                                    S      ETSS         QE+  EK         
Sbjct: 1398 RETNKQSAGNGRGRGGGEGRRRKGSSGFQQFETSSSGGDSGNVNQEVDGEKLDQPREVRR 1457

Query: 177  XXXXRKVVSYTVSDEFDDPEKEGQEGENCDEDSIAKESFVD 55
                R  V+YTV D  D+     +E     ED++ KE+  D
Sbjct: 1458 SMHTRNPVNYTVKDLEDEGGLSHKESSG--EDAMEKEAGED 1496



 Score = 83.2 bits (204), Expect = 1e-12
 Identities = 62/174 (35%), Positives = 96/174 (55%), Gaps = 1/174 (0%)
 Frame = -1

Query: 2748 AVKSGTSMEIAFEDIGEHGCGDDDGDLFNRLVGEDPVMNFSIDNSVSVKQSLYSTSDCEI 2569
            A ++ + MEI FED G+    DDD D+F RL   +PV   S +     KQ   S SD E 
Sbjct: 556  AFETESCMEITFEDDGKTEYFDDD-DIFARLAAGEPVTLPSPEEKSLRKQPSGSDSDFEW 614

Query: 2568 D-GVIQERGNVLSNDIKVVNEPSQMEGGMSDEDEVEWEEGSLDIPEKSSLCLDKSQKTFT 2392
            + GV++ + + ++  +   +     E  ++D+ EVEWEE   D P+ SS  ++ S +  +
Sbjct: 615  EEGVVEGKWDGVTPGMNAEHNLLNKESNITDDSEVEWEEEPSDAPKSSSGPVE-SGRMLS 673

Query: 2391 KGSLEEEAEFQEAIRRSLEDMVDCRIINEPCEDEESRRAGEKVIKDIDWEPVHE 2230
            KG  EEE++ QEAIRRSL D+   +  + P +  ES+  GE +  D D+  +HE
Sbjct: 674  KGYWEEESDLQEAIRRSLTDVGVEKSNSFPSDVIESKNLGENL--DEDFGSLHE 725