BLASTX nr result
ID: Forsythia23_contig00018844
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia23_contig00018844
(472 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009334115.1| PREDICTED: zinc finger CCCH domain-containin... 65 2e-08
ref|XP_008365380.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ... 65 2e-08
ref|XP_008230555.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ... 64 4e-08
ref|XP_007217064.1| hypothetical protein PRUPE_ppa001047mg [Prun... 64 4e-08
ref|XP_009377178.1| PREDICTED: zinc finger CCCH domain-containin... 60 4e-07
gb|KDO55177.1| hypothetical protein CISIN_1g040778mg [Citrus sin... 60 6e-07
ref|XP_006470267.1| PREDICTED: zinc finger CCCH domain-containin... 60 6e-07
ref|XP_006446567.1| hypothetical protein CICLE_v10014173mg [Citr... 60 6e-07
ref|XP_008341424.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ... 59 1e-06
ref|XP_012081373.1| PREDICTED: zinc finger CCCH domain-containin... 59 2e-06
ref|XP_010108813.1| Zinc finger CCCH domain-containing protein 4... 57 4e-06
ref|XP_011098434.1| PREDICTED: zinc finger CCCH domain-containin... 57 4e-06
emb|CBI34878.3| unnamed protein product [Vitis vinifera] 57 6e-06
ref|XP_002524655.1| rrm/rnp domain, putative [Ricinus communis] ... 57 6e-06
ref|XP_002273438.2| PREDICTED: zinc finger CCCH domain-containin... 57 6e-06
>ref|XP_009334115.1| PREDICTED: zinc finger CCCH domain-containing protein 41-like
[Pyrus x bretschneideri]
Length = 939
Score = 65.1 bits (157), Expect = 2e-08
Identities = 36/68 (52%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = -2
Query: 201 NLRYKHSMELKVSSPKPG-LSPSDCVSXXXXXXXXXXXXXXXDRNHKHRKKETRSHSLER 25
++ ++ SMELKVSSPKPG LSPSDC+S RNHKHR+++TRS SLE
Sbjct: 5 SIDFEGSMELKVSSPKPGCLSPSDCISDPEEKELSDDDDDD--RNHKHRRRDTRSQSLET 62
Query: 24 GALDQVFT 1
LDQV T
Sbjct: 63 DTLDQVIT 70
>ref|XP_008365380.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 41-like [Malus domestica]
Length = 942
Score = 65.1 bits (157), Expect = 2e-08
Identities = 36/68 (52%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = -2
Query: 201 NLRYKHSMELKVSSPKPG-LSPSDCVSXXXXXXXXXXXXXXXDRNHKHRKKETRSHSLER 25
++ ++ SMELKVSSPKPG LSPSDC+S RNHKHR+++TRS SLE
Sbjct: 5 SIDFEGSMELKVSSPKPGGLSPSDCISDPEEKELSDDDDDD--RNHKHRRRDTRSQSLET 62
Query: 24 GALDQVFT 1
LDQV T
Sbjct: 63 DTLDQVIT 70
>ref|XP_008230555.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 41 [Prunus mume]
Length = 913
Score = 63.9 bits (154), Expect = 4e-08
Identities = 36/59 (61%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Frame = -2
Query: 180 MELKVSSPKPG-LSPSDCVSXXXXXXXXXXXXXXXDRNHKHRKKETRSHSLERGALDQV 7
MELKVSSPKPG LSPSDC+S RNHKHR++ETRS SLER LDQV
Sbjct: 1 MELKVSSPKPGGLSPSDCISDPEEKEVSDDDDDD--RNHKHRRRETRSQSLERDTLDQV 57
>ref|XP_007217064.1| hypothetical protein PRUPE_ppa001047mg [Prunus persica]
gi|462413214|gb|EMJ18263.1| hypothetical protein
PRUPE_ppa001047mg [Prunus persica]
Length = 924
Score = 63.9 bits (154), Expect = 4e-08
Identities = 36/59 (61%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Frame = -2
Query: 180 MELKVSSPKPG-LSPSDCVSXXXXXXXXXXXXXXXDRNHKHRKKETRSHSLERGALDQV 7
MELKVSSPKPG LSPSDC+S RNHKHR++ETRS SLER LDQV
Sbjct: 1 MELKVSSPKPGGLSPSDCISDPEEKEVSDDDDDD--RNHKHRRRETRSQSLERDTLDQV 57
>ref|XP_009377178.1| PREDICTED: zinc finger CCCH domain-containing protein 41-like
[Pyrus x bretschneideri]
gi|694404613|ref|XP_009377179.1| PREDICTED: zinc finger
CCCH domain-containing protein 41-like [Pyrus x
bretschneideri] gi|694404616|ref|XP_009377180.1|
PREDICTED: zinc finger CCCH domain-containing protein
41-like [Pyrus x bretschneideri]
Length = 941
Score = 60.5 bits (145), Expect = 4e-07
Identities = 35/65 (53%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Frame = -2
Query: 192 YKHSMELKVSSPKPG-LSPSDCVSXXXXXXXXXXXXXXXDRNHKHRKKETRSHSLERGAL 16
++ SMELKVSSPKPG LSPSDC S RNHKHR+++TRS S ER
Sbjct: 8 FEGSMELKVSSPKPGGLSPSDCSSDPEEKEVSDDDDDD--RNHKHRRRDTRSQSSERDTF 65
Query: 15 DQVFT 1
DQV T
Sbjct: 66 DQVTT 70
>gb|KDO55177.1| hypothetical protein CISIN_1g040778mg [Citrus sinensis]
Length = 262
Score = 60.1 bits (144), Expect = 6e-07
Identities = 34/60 (56%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Frame = -2
Query: 180 MELKVSSPKPG-LSPSDCVSXXXXXXXXXXXXXXXDRNHKHRKKETRSHSLERGALDQVF 4
MELKVSSPKP LSP DC S RNHKHR++ETRS SLER +LDQV+
Sbjct: 1 MELKVSSPKPASLSPPDCTSDPEEKELSDEDDDD--RNHKHRRRETRSQSLERDSLDQVY 58
>ref|XP_006470267.1| PREDICTED: zinc finger CCCH domain-containing protein 41-like
isoform X1 [Citrus sinensis]
gi|568832073|ref|XP_006470268.1| PREDICTED: zinc finger
CCCH domain-containing protein 41-like isoform X2
[Citrus sinensis] gi|568832075|ref|XP_006470269.1|
PREDICTED: zinc finger CCCH domain-containing protein
41-like isoform X3 [Citrus sinensis]
gi|568832077|ref|XP_006470270.1| PREDICTED: zinc finger
CCCH domain-containing protein 41-like isoform X4
[Citrus sinensis]
Length = 947
Score = 60.1 bits (144), Expect = 6e-07
Identities = 34/60 (56%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Frame = -2
Query: 180 MELKVSSPKPG-LSPSDCVSXXXXXXXXXXXXXXXDRNHKHRKKETRSHSLERGALDQVF 4
MELKVSSPKP LSP DC S RNHKHR++ETRS SLER +LDQV+
Sbjct: 1 MELKVSSPKPASLSPPDCTSDPEEKELSDEDDDD--RNHKHRRRETRSQSLERDSLDQVY 58
>ref|XP_006446567.1| hypothetical protein CICLE_v10014173mg [Citrus clementina]
gi|557549178|gb|ESR59807.1| hypothetical protein
CICLE_v10014173mg [Citrus clementina]
Length = 946
Score = 60.1 bits (144), Expect = 6e-07
Identities = 34/60 (56%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Frame = -2
Query: 180 MELKVSSPKPG-LSPSDCVSXXXXXXXXXXXXXXXDRNHKHRKKETRSHSLERGALDQVF 4
MELKVSSPKP LSP DC S RNHKHR++ETRS SLER +LDQV+
Sbjct: 1 MELKVSSPKPASLSPPDCTSDPEEKELSDEDDDD--RNHKHRRRETRSQSLERDSLDQVY 58
>ref|XP_008341424.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 41 [Malus domestica]
Length = 941
Score = 59.3 bits (142), Expect = 1e-06
Identities = 34/65 (52%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Frame = -2
Query: 192 YKHSMELKVSSPKPG-LSPSDCVSXXXXXXXXXXXXXXXDRNHKHRKKETRSHSLERGAL 16
++ SMELKVSSPKPG LSPSDC + RNHKHR+++TRS S ER
Sbjct: 8 FEGSMELKVSSPKPGGLSPSDCSNDPEEKEVSDDDDDD--RNHKHRRRDTRSQSSERDTF 65
Query: 15 DQVFT 1
DQV T
Sbjct: 66 DQVTT 70
>ref|XP_012081373.1| PREDICTED: zinc finger CCCH domain-containing protein 41 [Jatropha
curcas] gi|802542490|ref|XP_012081382.1| PREDICTED: zinc
finger CCCH domain-containing protein 41 [Jatropha
curcas] gi|643739589|gb|KDP45327.1| hypothetical protein
JCGZ_09576 [Jatropha curcas]
Length = 958
Score = 58.5 bits (140), Expect = 2e-06
Identities = 34/61 (55%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Frame = -2
Query: 180 MELKVSSPKPG-LSPSDCVSXXXXXXXXXXXXXXXDRNHKHRKKETRSHSLERGALDQVF 4
MELKVSS KPG LSPSDC S RNHKHR++ETRS SLER +L+ +F
Sbjct: 1 MELKVSSLKPGGLSPSDCASDPEEKEVSDEDDDD--RNHKHRRRETRSQSLERDSLEPMF 58
Query: 3 T 1
T
Sbjct: 59 T 59
>ref|XP_010108813.1| Zinc finger CCCH domain-containing protein 41 [Morus notabilis]
gi|587933353|gb|EXC20328.1| Zinc finger CCCH
domain-containing protein 41 [Morus notabilis]
Length = 930
Score = 57.4 bits (137), Expect = 4e-06
Identities = 34/61 (55%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Frame = -2
Query: 180 MELKVSSPKPG-LSPSDCVSXXXXXXXXXXXXXXXDRNHKHRKKETRSHSLERGALDQVF 4
MELK+SSPK G LS SDC S RNHKHR+++TRS SLER LDQVF
Sbjct: 1 MELKISSPKLGNLSSSDCNSDPEEKEVSDDDDDD--RNHKHRRRDTRSQSLERDTLDQVF 58
Query: 3 T 1
T
Sbjct: 59 T 59
>ref|XP_011098434.1| PREDICTED: zinc finger CCCH domain-containing protein 41 [Sesamum
indicum]
Length = 951
Score = 57.4 bits (137), Expect = 4e-06
Identities = 30/57 (52%), Positives = 34/57 (59%)
Frame = -2
Query: 180 MELKVSSPKPGLSPSDCVSXXXXXXXXXXXXXXXDRNHKHRKKETRSHSLERGALDQ 10
MELKVSS KPG S SDC S DRNHKHR++E RS SLE ++DQ
Sbjct: 1 MELKVSSEKPGFSSSDCGSDPDEKEISEGEDEDDDRNHKHRRREARSQSLEENSIDQ 57
>emb|CBI34878.3| unnamed protein product [Vitis vinifera]
Length = 700
Score = 56.6 bits (135), Expect = 6e-06
Identities = 34/61 (55%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Frame = -2
Query: 180 MELKVSSPKP-GLSPSDCVSXXXXXXXXXXXXXXXDRNHKHRKKETRSHSLERGALDQVF 4
MELKVSSPKP GLSPSD S RNHKHR++ETRS SLER +L+QV
Sbjct: 1 MELKVSSPKPSGLSPSDGESDPEEKEISDEDDDD--RNHKHRRRETRSQSLERDSLEQVL 58
Query: 3 T 1
+
Sbjct: 59 S 59
>ref|XP_002524655.1| rrm/rnp domain, putative [Ricinus communis]
gi|223536016|gb|EEF37674.1| rrm/rnp domain, putative
[Ricinus communis]
Length = 972
Score = 56.6 bits (135), Expect = 6e-06
Identities = 32/61 (52%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Frame = -2
Query: 180 MELKVSSPKPG-LSPSDCVSXXXXXXXXXXXXXXXDRNHKHRKKETRSHSLERGALDQVF 4
MELKV+S KPG LSPSDC S RNHKHR++ETRS S ER +L+ +F
Sbjct: 1 MELKVASVKPGGLSPSDCASDPEEKEISDEDDDD--RNHKHRRRETRSQSTERDSLEPIF 58
Query: 3 T 1
T
Sbjct: 59 T 59
>ref|XP_002273438.2| PREDICTED: zinc finger CCCH domain-containing protein 41 [Vitis
vinifera] gi|731419004|ref|XP_010660871.1| PREDICTED:
zinc finger CCCH domain-containing protein 41 [Vitis
vinifera]
Length = 948
Score = 56.6 bits (135), Expect = 6e-06
Identities = 34/61 (55%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Frame = -2
Query: 180 MELKVSSPKP-GLSPSDCVSXXXXXXXXXXXXXXXDRNHKHRKKETRSHSLERGALDQVF 4
MELKVSSPKP GLSPSD S RNHKHR++ETRS SLER +L+QV
Sbjct: 1 MELKVSSPKPSGLSPSDGESDPEEKEISDEDDDD--RNHKHRRRETRSQSLERDSLEQVL 58
Query: 3 T 1
+
Sbjct: 59 S 59