BLASTX nr result
ID: Forsythia23_contig00017768
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia23_contig00017768
(566 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011088289.1| PREDICTED: polyadenylate-binding protein RBP... 107 2e-43
gb|AAB92518.1| putative RNA binding protein [Nicotiana tabacum] 98 7e-37
ref|XP_009590296.1| PREDICTED: polyadenylate-binding protein RBP... 98 7e-37
ref|XP_009794616.1| PREDICTED: polyadenylate-binding protein RBP... 98 9e-37
ref|XP_009794615.1| PREDICTED: polyadenylate-binding protein RBP... 98 9e-37
ref|XP_009783555.1| PREDICTED: polyadenylate-binding protein RBP... 90 6e-36
ref|XP_009628458.1| PREDICTED: polyadenylate-binding protein RBP... 91 6e-36
sp|Q9LEB3.1|RBP47_NICPL RecName: Full=Polyadenylate-binding prot... 98 7e-36
emb|CDO97156.1| unnamed protein product [Coffea canephora] 102 2e-35
gb|AAC49850.1| DNA binding protein ACBF [Nicotiana tabacum] 98 6e-35
ref|XP_012836966.1| PREDICTED: polyadenylate-binding protein RBP... 88 1e-34
ref|XP_011092726.1| PREDICTED: polyadenylate-binding protein RBP... 92 1e-34
ref|XP_006349627.1| PREDICTED: polyadenylate-binding protein RBP... 92 2e-34
ref|XP_004230808.1| PREDICTED: polyadenylate-binding protein RBP... 101 2e-34
ref|XP_006346456.1| PREDICTED: polyadenylate-binding protein RBP... 100 5e-34
ref|NP_001234487.1| DNA-binding protein [Solanum lycopersicum] g... 88 4e-33
ref|XP_006349628.1| PREDICTED: polyadenylate-binding protein RBP... 81 4e-31
ref|XP_010327389.1| PREDICTED: DNA-binding protein isoform X1 [S... 80 1e-30
ref|NP_001275430.1| DNA-binding protein-like [Solanum tuberosum]... 80 1e-30
ref|XP_010327390.1| PREDICTED: DNA-binding protein isoform X2 [S... 80 3e-30
>ref|XP_011088289.1| PREDICTED: polyadenylate-binding protein RBP47 [Sesamum indicum]
Length = 423
Score = 107 bits (267), Expect(2) = 2e-43
Identities = 49/64 (76%), Positives = 54/64 (84%), Gaps = 1/64 (1%)
Frame = -1
Query: 338 VVGKQTVRLSWGRNLGNKQSRMDANNQWGGSYYGRQVYNGNGYNAGAVY-VPSNGHGNHQ 162
V+GKQTVRLSWGRN+GNKQSR+D N+QW G+YYGRQ YNG GY A A Y SNGHGNHQ
Sbjct: 360 VIGKQTVRLSWGRNMGNKQSRVDPNSQWNGAYYGRQGYNGYGYGAVAAYGASSNGHGNHQ 419
Query: 161 QPVS 150
QPVS
Sbjct: 420 QPVS 423
Score = 95.5 bits (236), Expect(2) = 2e-43
Identities = 50/60 (83%), Positives = 55/60 (91%)
Frame = -2
Query: 565 SSQAVILAGGYASNGALPQGSQSENDSSNTTIFVGGLDSDVTDVELRQSFTPFGEVISVK 386
SSQAV+LAGGY NG +PQG QSENDSSNTTIFVGGLDSDVTD ELRQSF+PFG+V+SVK
Sbjct: 274 SSQAVVLAGGYP-NGIVPQG-QSENDSSNTTIFVGGLDSDVTDEELRQSFSPFGDVVSVK 331
>gb|AAB92518.1| putative RNA binding protein [Nicotiana tabacum]
Length = 482
Score = 98.2 bits (243), Expect(2) = 7e-37
Identities = 49/60 (81%), Positives = 53/60 (88%)
Frame = -2
Query: 565 SSQAVILAGGYASNGALPQGSQSENDSSNTTIFVGGLDSDVTDVELRQSFTPFGEVISVK 386
SSQAVIL+GGYASNGA GSQS+ D+SNTTIFVGGLDSDVTD ELRQSF FGEV+SVK
Sbjct: 320 SSQAVILSGGYASNGAATHGSQSDGDASNTTIFVGGLDSDVTDEELRQSFNQFGEVVSVK 379
Score = 82.8 bits (203), Expect(2) = 7e-37
Identities = 42/76 (55%), Positives = 48/76 (63%), Gaps = 12/76 (15%)
Frame = -1
Query: 341 AVVGKQTVRLSWGRNLGNKQSRMDANNQWGGSYYGRQVYNGNGYNA-----------GAV 195
A++GKQ VRLSWGR+ NKQ R D+ +QW G Y GRQ Y G GY A GA
Sbjct: 407 AIIGKQAVRLSWGRSPANKQMRADSGSQWNGGYNGRQNYGGYGYGASQNQDSGMYATGAA 466
Query: 194 Y-VPSNGHGNHQQPVS 150
Y SNG+GNHQQPVS
Sbjct: 467 YGASSNGYGNHQQPVS 482
>ref|XP_009590296.1| PREDICTED: polyadenylate-binding protein RBP47 [Nicotiana
tomentosiformis]
Length = 430
Score = 98.2 bits (243), Expect(2) = 7e-37
Identities = 49/60 (81%), Positives = 53/60 (88%)
Frame = -2
Query: 565 SSQAVILAGGYASNGALPQGSQSENDSSNTTIFVGGLDSDVTDVELRQSFTPFGEVISVK 386
SSQAVIL+GGYASNGA GSQS+ D+SNTTIFVGGLDSDVTD ELRQSF FGEV+SVK
Sbjct: 268 SSQAVILSGGYASNGAATHGSQSDGDASNTTIFVGGLDSDVTDEELRQSFNQFGEVVSVK 327
Score = 82.8 bits (203), Expect(2) = 7e-37
Identities = 42/76 (55%), Positives = 48/76 (63%), Gaps = 12/76 (15%)
Frame = -1
Query: 341 AVVGKQTVRLSWGRNLGNKQSRMDANNQWGGSYYGRQVYNGNGYNA-----------GAV 195
A++GKQ VRLSWGR+ NKQ R D+ +QW G Y GRQ Y G GY A GA
Sbjct: 355 AIIGKQAVRLSWGRSPANKQMRADSGSQWNGGYNGRQNYGGYGYGASQNQDSGMYATGAA 414
Query: 194 Y-VPSNGHGNHQQPVS 150
Y SNG+GNHQQPVS
Sbjct: 415 YGASSNGYGNHQQPVS 430
>ref|XP_009794616.1| PREDICTED: polyadenylate-binding protein RBP47 isoform X2
[Nicotiana sylvestris]
Length = 431
Score = 97.8 bits (242), Expect(2) = 9e-37
Identities = 49/60 (81%), Positives = 53/60 (88%)
Frame = -2
Query: 565 SSQAVILAGGYASNGALPQGSQSENDSSNTTIFVGGLDSDVTDVELRQSFTPFGEVISVK 386
SSQAVIL+GGYASNGA GSQS+ DSSNTTIFVGGLDS+VTD ELRQSF FGEV+SVK
Sbjct: 269 SSQAVILSGGYASNGAATHGSQSDGDSSNTTIFVGGLDSEVTDEELRQSFNQFGEVVSVK 328
Score = 82.8 bits (203), Expect(2) = 9e-37
Identities = 42/76 (55%), Positives = 48/76 (63%), Gaps = 12/76 (15%)
Frame = -1
Query: 341 AVVGKQTVRLSWGRNLGNKQSRMDANNQWGGSYYGRQVYNGNGYNA-----------GAV 195
A++GKQ VRLSWGR+ NKQ R D+ +QW G Y GRQ Y G GY A GA
Sbjct: 356 AIIGKQAVRLSWGRSPANKQMRTDSGSQWNGGYNGRQNYGGYGYGASQNQDSGMYATGAA 415
Query: 194 Y-VPSNGHGNHQQPVS 150
Y SNG+GNHQQPVS
Sbjct: 416 YGASSNGYGNHQQPVS 431
>ref|XP_009794615.1| PREDICTED: polyadenylate-binding protein RBP47 isoform X1
[Nicotiana sylvestris]
Length = 402
Score = 97.8 bits (242), Expect(2) = 9e-37
Identities = 49/60 (81%), Positives = 53/60 (88%)
Frame = -2
Query: 565 SSQAVILAGGYASNGALPQGSQSENDSSNTTIFVGGLDSDVTDVELRQSFTPFGEVISVK 386
SSQAVIL+GGYASNGA GSQS+ DSSNTTIFVGGLDS+VTD ELRQSF FGEV+SVK
Sbjct: 240 SSQAVILSGGYASNGAATHGSQSDGDSSNTTIFVGGLDSEVTDEELRQSFNQFGEVVSVK 299
Score = 82.8 bits (203), Expect(2) = 9e-37
Identities = 42/76 (55%), Positives = 48/76 (63%), Gaps = 12/76 (15%)
Frame = -1
Query: 341 AVVGKQTVRLSWGRNLGNKQSRMDANNQWGGSYYGRQVYNGNGYNA-----------GAV 195
A++GKQ VRLSWGR+ NKQ R D+ +QW G Y GRQ Y G GY A GA
Sbjct: 327 AIIGKQAVRLSWGRSPANKQMRTDSGSQWNGGYNGRQNYGGYGYGASQNQDSGMYATGAA 386
Query: 194 Y-VPSNGHGNHQQPVS 150
Y SNG+GNHQQPVS
Sbjct: 387 YGASSNGYGNHQQPVS 402
>ref|XP_009783555.1| PREDICTED: polyadenylate-binding protein RBP47-like isoform X1
[Nicotiana sylvestris]
Length = 437
Score = 90.1 bits (222), Expect(2) = 6e-36
Identities = 46/76 (60%), Positives = 50/76 (65%), Gaps = 12/76 (15%)
Frame = -1
Query: 341 AVVGKQTVRLSWGRNLGNKQSRMDANNQWGGSYYGRQVYNGNGYN-----------AGAV 195
AV+GKQTVRLSWGRN NKQ R D+ +QW G YYGRQ Y G GY AGA
Sbjct: 362 AVIGKQTVRLSWGRNPANKQLRTDSGSQWNGGYYGRQNYGGYGYGASQSQDSSMYAAGAA 421
Query: 194 Y-VPSNGHGNHQQPVS 150
Y SNG+GNHQQPVS
Sbjct: 422 YGASSNGYGNHQQPVS 437
Score = 87.8 bits (216), Expect(2) = 6e-36
Identities = 45/60 (75%), Positives = 50/60 (83%)
Frame = -2
Query: 565 SSQAVILAGGYASNGALPQGSQSENDSSNTTIFVGGLDSDVTDVELRQSFTPFGEVISVK 386
SSQAVILAGG+ASNGA Q S S++D SNTT+FVGGLDSDVTD ELRQSF G V+SVK
Sbjct: 275 SSQAVILAGGHASNGAATQTSHSDSDLSNTTVFVGGLDSDVTDDELRQSFNQCGNVVSVK 334
>ref|XP_009628458.1| PREDICTED: polyadenylate-binding protein RBP47-like [Nicotiana
tomentosiformis]
Length = 418
Score = 90.9 bits (224), Expect(2) = 6e-36
Identities = 46/60 (76%), Positives = 51/60 (85%)
Frame = -2
Query: 565 SSQAVILAGGYASNGALPQGSQSENDSSNTTIFVGGLDSDVTDVELRQSFTPFGEVISVK 386
SSQAVILAGG+ASNGA Q S S++D SNTT+FVGGLDSDVTD ELRQSF FG V+SVK
Sbjct: 255 SSQAVILAGGHASNGAATQTSHSDSDLSNTTVFVGGLDSDVTDDELRQSFNQFGNVVSVK 314
Score = 87.0 bits (214), Expect(2) = 6e-36
Identities = 47/77 (61%), Positives = 51/77 (66%), Gaps = 13/77 (16%)
Frame = -1
Query: 341 AVVGKQTVRLSWGRNLGNKQSRMDANNQWGGSYYGRQVYNGNGYN-----------AGAV 195
AV+GKQTVRLSWGRN NKQ R D+ +QW G YYGRQ Y G GY AGAV
Sbjct: 342 AVIGKQTVRLSWGRNPANKQLRTDSGSQWNGGYYGRQNYGGYGYGASQSQDSSMYAAGAV 401
Query: 194 Y-VPSNGHGNH-QQPVS 150
Y SNG+GNH QQPVS
Sbjct: 402 YGASSNGYGNHQQQPVS 418
>sp|Q9LEB3.1|RBP47_NICPL RecName: Full=Polyadenylate-binding protein RBP47;
Short=Poly(A)-binding protein RBP47; AltName:
Full=RNA-binding protein 47; Short=NplRBP47 [Nicotiana
plumbaginifolia] gi|9663769|emb|CAC01238.1| RNA Binding
Protein 47 [Nicotiana plumbaginifolia]
Length = 428
Score = 97.8 bits (242), Expect(2) = 7e-36
Identities = 49/60 (81%), Positives = 53/60 (88%)
Frame = -2
Query: 565 SSQAVILAGGYASNGALPQGSQSENDSSNTTIFVGGLDSDVTDVELRQSFTPFGEVISVK 386
SSQAVIL+GGYASNGA GSQS+ DSSNTTIFVGGLDS+VTD ELRQSF FGEV+SVK
Sbjct: 266 SSQAVILSGGYASNGAATHGSQSDGDSSNTTIFVGGLDSEVTDEELRQSFNQFGEVVSVK 325
Score = 79.7 bits (195), Expect(2) = 7e-36
Identities = 41/76 (53%), Positives = 47/76 (61%), Gaps = 12/76 (15%)
Frame = -1
Query: 341 AVVGKQTVRLSWGRNLGNKQSRMDANNQWGGSYYGRQVYNGNGYNA-----------GAV 195
A++GKQ VRLSWGR+ NKQ R D+ +QW G Y GRQ Y G GY A GA
Sbjct: 353 AIIGKQAVRLSWGRSPANKQMRTDSGSQWNGGYNGRQNYGGYGYGASQNQDSGMYATGAA 412
Query: 194 Y-VPSNGHGNHQQPVS 150
Y SN +GNHQQPVS
Sbjct: 413 YGASSNRYGNHQQPVS 428
>emb|CDO97156.1| unnamed protein product [Coffea canephora]
Length = 438
Score = 102 bits (253), Expect(2) = 2e-35
Identities = 49/60 (81%), Positives = 56/60 (93%)
Frame = -2
Query: 565 SSQAVILAGGYASNGALPQGSQSENDSSNTTIFVGGLDSDVTDVELRQSFTPFGEVISVK 386
SSQAV+LAGGY SNG +PQGSQS++DSSNTTIFVGGLDSDVTD ELR+SF+ FGEV+SVK
Sbjct: 283 SSQAVVLAGGYPSNGVVPQGSQSDSDSSNTTIFVGGLDSDVTDEELRESFSQFGEVVSVK 342
Score = 74.3 bits (181), Expect(2) = 2e-35
Identities = 40/69 (57%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Frame = -1
Query: 341 AVVGKQTVRLSWGRNLGNKQSRMDANNQWGGSYYGRQVYNGNG-----YNAGAVYVPSNG 177
A +GKQ VRLSWGRN NKQ RMD++ Q GS YGRQ NG G Y A A SNG
Sbjct: 370 AAIGKQMVRLSWGRNPVNKQLRMDSSYQLNGSNYGRQGQNGYGYPMPQYAAAANGAASNG 429
Query: 176 HGNHQQPVS 150
HG +QQPV+
Sbjct: 430 HGGYQQPVN 438
>gb|AAC49850.1| DNA binding protein ACBF [Nicotiana tabacum]
Length = 428
Score = 98.2 bits (243), Expect(2) = 6e-35
Identities = 49/60 (81%), Positives = 53/60 (88%)
Frame = -2
Query: 565 SSQAVILAGGYASNGALPQGSQSENDSSNTTIFVGGLDSDVTDVELRQSFTPFGEVISVK 386
SSQAVIL+GGYASNGA GSQS+ D+SNTTIFVGGLDSDVTD ELRQSF FGEV+SVK
Sbjct: 266 SSQAVILSGGYASNGAATHGSQSDGDASNTTIFVGGLDSDVTDEELRQSFNQFGEVVSVK 325
Score = 76.3 bits (186), Expect(2) = 6e-35
Identities = 40/77 (51%), Positives = 45/77 (58%), Gaps = 13/77 (16%)
Frame = -1
Query: 341 AVVGKQTVRLSWGRNLGNKQSRMDANNQWGGSYYGRQVYNGNGY-------------NAG 201
A++GKQ VRLSWGR NKQ R D+ +QW G Y GRQ Y G GY A
Sbjct: 353 AIIGKQAVRLSWGRT-ANKQMRADSGSQWNGGYNGRQNYGGYGYGASQNQDSGMYATGAA 411
Query: 200 AVYVPSNGHGNHQQPVS 150
A SNG+GNHQQPVS
Sbjct: 412 AYGASSNGYGNHQQPVS 428
>ref|XP_012836966.1| PREDICTED: polyadenylate-binding protein RBP47-like [Erythranthe
guttatus] gi|604333353|gb|EYU37704.1| hypothetical
protein MIMGU_mgv1a006826mg [Erythranthe guttata]
Length = 430
Score = 87.8 bits (216), Expect(2) = 1e-34
Identities = 46/60 (76%), Positives = 52/60 (86%)
Frame = -2
Query: 565 SSQAVILAGGYASNGALPQGSQSENDSSNTTIFVGGLDSDVTDVELRQSFTPFGEVISVK 386
SSQAV+LAGG +NG +PQG Q+EN+SSNTTIFVGGLDSDVTD ELRQ+F GEVISVK
Sbjct: 284 SSQAVVLAGGGFANGVVPQG-QAENESSNTTIFVGGLDSDVTDEELRQAFVSSGEVISVK 342
Score = 85.9 bits (211), Expect(2) = 1e-34
Identities = 45/65 (69%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Frame = -1
Query: 341 AVVGKQTVRLSWGRNLGNKQSRMDANNQ-WGGSYYGRQVYNGNGYNAGAVYVPSNGHGNH 165
AV+GKQTVRLSWGRN+GNKQ R D N Q + G YYGRQ YNG GY G SNGHGNH
Sbjct: 370 AVIGKQTVRLSWGRNMGNKQFRTDQNGQGYNGGYYGRQGYNG-GYGYGP---SSNGHGNH 425
Query: 164 QQPVS 150
QQ VS
Sbjct: 426 QQTVS 430
>ref|XP_011092726.1| PREDICTED: polyadenylate-binding protein RBP47-like isoform X1
[Sesamum indicum]
Length = 403
Score = 92.4 bits (228), Expect(2) = 1e-34
Identities = 45/60 (75%), Positives = 55/60 (91%)
Frame = -2
Query: 565 SSQAVILAGGYASNGALPQGSQSENDSSNTTIFVGGLDSDVTDVELRQSFTPFGEVISVK 386
SSQA++L+GGYASNGA P G S++DSSNTT+FVGGLDSDVTD +LR+SFTP+GEV+SVK
Sbjct: 263 SSQAMVLSGGYASNGAGPVG-HSDSDSSNTTVFVGGLDSDVTDEQLRESFTPYGEVVSVK 321
Score = 80.9 bits (198), Expect(2) = 1e-34
Identities = 41/63 (65%), Positives = 44/63 (69%)
Frame = -1
Query: 338 VVGKQTVRLSWGRNLGNKQSRMDANNQWGGSYYGRQVYNGNGYNAGAVYVPSNGHGNHQQ 159
V+GKQTVRLSWGRNLGNKQ+ G+YYGRQ YNG GY A SNG GNHQQ
Sbjct: 350 VIGKQTVRLSWGRNLGNKQN---------GAYYGRQGYNGYGYAGAANGPSSNGQGNHQQ 400
Query: 158 PVS 150
PVS
Sbjct: 401 PVS 403
>ref|XP_006349627.1| PREDICTED: polyadenylate-binding protein RBP47 isoform X1 [Solanum
tuberosum]
Length = 428
Score = 92.4 bits (228), Expect(2) = 2e-34
Identities = 46/60 (76%), Positives = 53/60 (88%)
Frame = -2
Query: 565 SSQAVILAGGYASNGALPQGSQSENDSSNTTIFVGGLDSDVTDVELRQSFTPFGEVISVK 386
SSQAVILAGG+ASNGA Q SQ+++D SNTT+FVGGLDSDVTD ELRQSF+ FG V+SVK
Sbjct: 267 SSQAVILAGGHASNGAATQTSQTDSDLSNTTVFVGGLDSDVTDEELRQSFSQFGNVVSVK 326
Score = 80.5 bits (197), Expect(2) = 2e-34
Identities = 41/74 (55%), Positives = 47/74 (63%), Gaps = 11/74 (14%)
Frame = -1
Query: 338 VVGKQTVRLSWGRNLGNKQSRMDANNQWGGSYYGRQVYNGNG----------YNAGAVY- 192
V+G QTVRLSWGRN NKQ R D+ +QW G YYGRQ Y G G Y AGA +
Sbjct: 355 VIGTQTVRLSWGRNPANKQFRTDSGSQWNGGYYGRQNYGGYGYGASQSQDSMYGAGAAHG 414
Query: 191 VPSNGHGNHQQPVS 150
SNG+GNH+Q VS
Sbjct: 415 ASSNGYGNHEQSVS 428
>ref|XP_004230808.1| PREDICTED: polyadenylate-binding protein RBP47 [Solanum
lycopersicum]
Length = 413
Score = 101 bits (251), Expect(2) = 2e-34
Identities = 51/60 (85%), Positives = 54/60 (90%)
Frame = -2
Query: 565 SSQAVILAGGYASNGALPQGSQSENDSSNTTIFVGGLDSDVTDVELRQSFTPFGEVISVK 386
SSQAVIL+GGYASNGA GSQS+ DSSNTTIFVGGLDSDVTD ELRQSFT FGEV+SVK
Sbjct: 258 SSQAVILSGGYASNGAATHGSQSDGDSSNTTIFVGGLDSDVTDEELRQSFTQFGEVVSVK 317
Score = 71.6 bits (174), Expect(2) = 2e-34
Identities = 41/72 (56%), Positives = 45/72 (62%), Gaps = 8/72 (11%)
Frame = -1
Query: 341 AVVGKQTVRLSWGRNLGNKQSRMDANNQWGGSYYGRQVYNGNGYNAG--------AVYVP 186
AV+GKQ VRLSWGR+ NKQ R D+ N GG YYGRQ Y G GY A A
Sbjct: 345 AVIGKQAVRLSWGRSPSNKQMRSDSGN--GGGYYGRQNYGGYGYGASQNQDSGMYAAGAA 402
Query: 185 SNGHGNHQQPVS 150
SNG+GN QQPVS
Sbjct: 403 SNGYGN-QQPVS 413
>ref|XP_006346456.1| PREDICTED: polyadenylate-binding protein RBP47 [Solanum tuberosum]
Length = 420
Score = 100 bits (248), Expect(2) = 5e-34
Identities = 50/60 (83%), Positives = 54/60 (90%)
Frame = -2
Query: 565 SSQAVILAGGYASNGALPQGSQSENDSSNTTIFVGGLDSDVTDVELRQSFTPFGEVISVK 386
SSQAVIL+GGYASNG+ GSQS+ DSSNTTIFVGGLDSDVTD ELRQSFT FGEV+SVK
Sbjct: 265 SSQAVILSGGYASNGSATHGSQSDGDSSNTTIFVGGLDSDVTDEELRQSFTQFGEVVSVK 324
Score = 71.2 bits (173), Expect(2) = 5e-34
Identities = 40/72 (55%), Positives = 45/72 (62%), Gaps = 8/72 (11%)
Frame = -1
Query: 341 AVVGKQTVRLSWGRNLGNKQSRMDANNQWGGSYYGRQVYNGNGYNAG--------AVYVP 186
A++GKQ VRLSWGR+ NKQ R D+ N GG YYGRQ Y G GY A A
Sbjct: 352 AIIGKQAVRLSWGRSPANKQMRTDSGN--GGGYYGRQNYGGYGYGASQNQDSGMYAAGAA 409
Query: 185 SNGHGNHQQPVS 150
SNG+GN QQPVS
Sbjct: 410 SNGYGN-QQPVS 420
>ref|NP_001234487.1| DNA-binding protein [Solanum lycopersicum]
gi|40804404|gb|AAR91698.1| DNA-binding protein [Solanum
lycopersicum]
Length = 428
Score = 87.8 bits (216), Expect(2) = 4e-33
Identities = 43/58 (74%), Positives = 51/58 (87%)
Frame = -2
Query: 559 QAVILAGGYASNGALPQGSQSENDSSNTTIFVGGLDSDVTDVELRQSFTPFGEVISVK 386
QAVILAGG+ASNGA Q SQ+++D SNTT+FVGGLDS+VTD ELRQSF+ FG V+SVK
Sbjct: 269 QAVILAGGHASNGAATQTSQTDSDLSNTTVFVGGLDSEVTDEELRQSFSQFGNVVSVK 326
Score = 80.5 bits (197), Expect(2) = 4e-33
Identities = 41/74 (55%), Positives = 47/74 (63%), Gaps = 11/74 (14%)
Frame = -1
Query: 338 VVGKQTVRLSWGRNLGNKQSRMDANNQWGGSYYGRQVYNGNG----------YNAGAVY- 192
V+G QTVRLSWGRN NKQ R D+ +QW G YYGRQ Y G G Y AGA +
Sbjct: 355 VIGAQTVRLSWGRNPANKQFRTDSGSQWNGGYYGRQNYGGYGYGASQSQDSMYGAGAAHG 414
Query: 191 VPSNGHGNHQQPVS 150
SNG+GNH+Q VS
Sbjct: 415 ASSNGYGNHEQSVS 428
>ref|XP_006349628.1| PREDICTED: polyadenylate-binding protein RBP47 isoform X2 [Solanum
tuberosum]
Length = 424
Score = 81.3 bits (199), Expect(2) = 4e-31
Identities = 39/53 (73%), Positives = 46/53 (86%)
Frame = -2
Query: 544 AGGYASNGALPQGSQSENDSSNTTIFVGGLDSDVTDVELRQSFTPFGEVISVK 386
AGG+ASNGA Q SQ+++D SNTT+FVGGLDSDVTD ELRQSF+ FG V+SVK
Sbjct: 270 AGGHASNGAATQTSQTDSDLSNTTVFVGGLDSDVTDEELRQSFSQFGNVVSVK 322
Score = 80.5 bits (197), Expect(2) = 4e-31
Identities = 41/74 (55%), Positives = 47/74 (63%), Gaps = 11/74 (14%)
Frame = -1
Query: 338 VVGKQTVRLSWGRNLGNKQSRMDANNQWGGSYYGRQVYNGNG----------YNAGAVY- 192
V+G QTVRLSWGRN NKQ R D+ +QW G YYGRQ Y G G Y AGA +
Sbjct: 351 VIGTQTVRLSWGRNPANKQFRTDSGSQWNGGYYGRQNYGGYGYGASQSQDSMYGAGAAHG 410
Query: 191 VPSNGHGNHQQPVS 150
SNG+GNH+Q VS
Sbjct: 411 ASSNGYGNHEQSVS 424
>ref|XP_010327389.1| PREDICTED: DNA-binding protein isoform X1 [Solanum lycopersicum]
Length = 424
Score = 80.5 bits (197), Expect(2) = 1e-30
Identities = 41/74 (55%), Positives = 47/74 (63%), Gaps = 11/74 (14%)
Frame = -1
Query: 338 VVGKQTVRLSWGRNLGNKQSRMDANNQWGGSYYGRQVYNGNG----------YNAGAVY- 192
V+G QTVRLSWGRN NKQ R D+ +QW G YYGRQ Y G G Y AGA +
Sbjct: 351 VIGAQTVRLSWGRNPANKQFRTDSGSQWNGGYYGRQNYGGYGYGASQSQDSMYGAGAAHG 410
Query: 191 VPSNGHGNHQQPVS 150
SNG+GNH+Q VS
Sbjct: 411 ASSNGYGNHEQSVS 424
Score = 79.7 bits (195), Expect(2) = 1e-30
Identities = 38/53 (71%), Positives = 46/53 (86%)
Frame = -2
Query: 544 AGGYASNGALPQGSQSENDSSNTTIFVGGLDSDVTDVELRQSFTPFGEVISVK 386
AGG+ASNGA Q SQ+++D SNTT+FVGGLDS+VTD ELRQSF+ FG V+SVK
Sbjct: 270 AGGHASNGAATQTSQTDSDLSNTTVFVGGLDSEVTDEELRQSFSQFGNVVSVK 322
>ref|NP_001275430.1| DNA-binding protein-like [Solanum tuberosum]
gi|82621116|gb|ABB86246.1| DNA-binding protein-like
[Solanum tuberosum]
Length = 423
Score = 80.5 bits (197), Expect(2) = 1e-30
Identities = 41/74 (55%), Positives = 47/74 (63%), Gaps = 11/74 (14%)
Frame = -1
Query: 338 VVGKQTVRLSWGRNLGNKQSRMDANNQWGGSYYGRQVYNGNG----------YNAGAVY- 192
V+G QTVRLSWGRN NKQ R D+ +QW G YYGRQ Y G G Y AGA +
Sbjct: 350 VIGTQTVRLSWGRNPANKQFRTDSGSQWNGGYYGRQNYGGYGYGASQSQDSMYGAGAAHG 409
Query: 191 VPSNGHGNHQQPVS 150
SNG+GNH+Q VS
Sbjct: 410 ASSNGYGNHEQSVS 423
Score = 79.7 bits (195), Expect(2) = 1e-30
Identities = 38/52 (73%), Positives = 45/52 (86%)
Frame = -2
Query: 541 GGYASNGALPQGSQSENDSSNTTIFVGGLDSDVTDVELRQSFTPFGEVISVK 386
GG+ASNGA Q SQ+++D SNTT+FVGGLDSDVTD ELRQSF+ FG V+SVK
Sbjct: 270 GGHASNGAATQTSQTDSDLSNTTVFVGGLDSDVTDEELRQSFSQFGNVVSVK 321
>ref|XP_010327390.1| PREDICTED: DNA-binding protein isoform X2 [Solanum lycopersicum]
Length = 423
Score = 80.5 bits (197), Expect(2) = 3e-30
Identities = 41/74 (55%), Positives = 47/74 (63%), Gaps = 11/74 (14%)
Frame = -1
Query: 338 VVGKQTVRLSWGRNLGNKQSRMDANNQWGGSYYGRQVYNGNG----------YNAGAVY- 192
V+G QTVRLSWGRN NKQ R D+ +QW G YYGRQ Y G G Y AGA +
Sbjct: 350 VIGAQTVRLSWGRNPANKQFRTDSGSQWNGGYYGRQNYGGYGYGASQSQDSMYGAGAAHG 409
Query: 191 VPSNGHGNHQQPVS 150
SNG+GNH+Q VS
Sbjct: 410 ASSNGYGNHEQSVS 423
Score = 78.2 bits (191), Expect(2) = 3e-30
Identities = 37/52 (71%), Positives = 45/52 (86%)
Frame = -2
Query: 541 GGYASNGALPQGSQSENDSSNTTIFVGGLDSDVTDVELRQSFTPFGEVISVK 386
GG+ASNGA Q SQ+++D SNTT+FVGGLDS+VTD ELRQSF+ FG V+SVK
Sbjct: 270 GGHASNGAATQTSQTDSDLSNTTVFVGGLDSEVTDEELRQSFSQFGNVVSVK 321