BLASTX nr result
ID: Forsythia23_contig00017446
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia23_contig00017446
(384 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007047889.1| RNA-binding (RRM/RBD/RNP motifs) family prot... 83 8e-14
ref|XP_007047888.1| RNA-binding (RRM/RBD/RNP motifs) family prot... 80 4e-13
ref|XP_012469813.1| PREDICTED: polyadenylate-binding protein 2 i... 77 3e-12
gb|KJB17317.1| hypothetical protein B456_003G040800 [Gossypium r... 77 3e-12
gb|KHG00394.1| Polyadenylate-binding 2 [Gossypium arboreum] 77 3e-12
ref|XP_011031058.1| PREDICTED: polyadenylate-binding protein 3-l... 76 8e-12
ref|XP_011022817.1| PREDICTED: polyadenylate-binding protein 2-l... 76 8e-12
ref|XP_002306300.1| hypothetical protein POPTR_0005s07440g [Popu... 76 8e-12
ref|XP_002309968.1| hypothetical protein POPTR_0007s05140g [Popu... 76 8e-12
ref|XP_003635560.2| PREDICTED: polyadenylate-binding protein 2 [... 76 1e-11
ref|XP_012081610.1| PREDICTED: polyadenylate-binding protein 2 [... 75 2e-11
emb|CDP01496.1| unnamed protein product [Coffea canephora] 75 2e-11
ref|XP_002531675.1| poly-A binding protein, putative [Ricinus co... 75 2e-11
ref|XP_010937393.1| PREDICTED: polyadenylate-binding protein 2 i... 74 3e-11
ref|XP_010937392.1| PREDICTED: polyadenylate-binding protein 2 i... 74 5e-11
ref|XP_008777640.1| PREDICTED: polyadenylate-binding protein 2-l... 74 5e-11
ref|XP_007205858.1| hypothetical protein PRUPE_ppa011157mg [Prun... 74 5e-11
ref|XP_006353217.1| PREDICTED: polyadenylate-binding protein 2-A... 72 1e-10
ref|XP_008381986.1| PREDICTED: polyadenylate-binding protein 2 i... 72 2e-10
gb|KDO60716.1| hypothetical protein CISIN_1g041633mg [Citrus sin... 72 2e-10
>ref|XP_007047889.1| RNA-binding (RRM/RBD/RNP motifs) family protein isoform 2
[Theobroma cacao] gi|508700150|gb|EOX92046.1|
RNA-binding (RRM/RBD/RNP motifs) family protein isoform
2 [Theobroma cacao]
Length = 215
Score = 82.8 bits (203), Expect = 8e-14
Identities = 51/100 (51%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
Frame = -3
Query: 286 VYGGEIPDEGEY---IDPHNADVEMSXXXXXXXXX--KXXXXXXXXXXXXXAKVEKEMGX 122
VYGGEIPDEGE +DPHNADV+MS K AKVEKEMG
Sbjct: 8 VYGGEIPDEGEMEGDLDPHNADVDMSAADDDAVKKRLKEMEDEAAALREMQAKVEKEMGA 67
Query: 121 XXXXXXXXXXXXXXXXXDSRSIFVGNVDYACTPEEVQQHF 2
DSRS+FVGNVDYACTPEEVQQHF
Sbjct: 68 VQDPAGAAANQASREEADSRSVFVGNVDYACTPEEVQQHF 107
>ref|XP_007047888.1| RNA-binding (RRM/RBD/RNP motifs) family protein isoform 1
[Theobroma cacao] gi|508700149|gb|EOX92045.1|
RNA-binding (RRM/RBD/RNP motifs) family protein isoform
1 [Theobroma cacao]
Length = 221
Score = 80.5 bits (197), Expect = 4e-13
Identities = 51/106 (48%), Positives = 54/106 (50%), Gaps = 11/106 (10%)
Frame = -3
Query: 286 VYGGEIPDEGEY---IDPHNADVEMSXXXXXXXXX--------KXXXXXXXXXXXXXAKV 140
VYGGEIPDEGE +DPHNADV+MS K AKV
Sbjct: 8 VYGGEIPDEGEMEGDLDPHNADVDMSAADDDAVKELDEMKKRLKEMEDEAAALREMQAKV 67
Query: 139 EKEMGXXXXXXXXXXXXXXXXXXDSRSIFVGNVDYACTPEEVQQHF 2
EKEMG DSRS+FVGNVDYACTPEEVQQHF
Sbjct: 68 EKEMGAVQDPAGAAANQASREEADSRSVFVGNVDYACTPEEVQQHF 113
>ref|XP_012469813.1| PREDICTED: polyadenylate-binding protein 2 isoform X1 [Gossypium
raimondii] gi|763749931|gb|KJB17319.1| hypothetical
protein B456_003G040800 [Gossypium raimondii]
Length = 221
Score = 77.4 bits (189), Expect = 3e-12
Identities = 50/106 (47%), Positives = 53/106 (50%), Gaps = 11/106 (10%)
Frame = -3
Query: 286 VYGGEIPDEGEY---IDPHNADVEMSXXXXXXXXX--------KXXXXXXXXXXXXXAKV 140
VYGGEIPDEGE +DP NADV+MS K AKV
Sbjct: 8 VYGGEIPDEGEMEGELDPQNADVDMSAADEDAVKELDEMKKRLKEMEDEAAALREMQAKV 67
Query: 139 EKEMGXXXXXXXXXXXXXXXXXXDSRSIFVGNVDYACTPEEVQQHF 2
EKEMG DSRS+FVGNVDYACTPEEVQQHF
Sbjct: 68 EKEMGAVQDPAGATANQASKEEADSRSVFVGNVDYACTPEEVQQHF 113
>gb|KJB17317.1| hypothetical protein B456_003G040800 [Gossypium raimondii]
Length = 206
Score = 77.4 bits (189), Expect = 3e-12
Identities = 50/106 (47%), Positives = 53/106 (50%), Gaps = 11/106 (10%)
Frame = -3
Query: 286 VYGGEIPDEGEY---IDPHNADVEMSXXXXXXXXX--------KXXXXXXXXXXXXXAKV 140
VYGGEIPDEGE +DP NADV+MS K AKV
Sbjct: 8 VYGGEIPDEGEMEGELDPQNADVDMSAADEDAVKELDEMKKRLKEMEDEAAALREMQAKV 67
Query: 139 EKEMGXXXXXXXXXXXXXXXXXXDSRSIFVGNVDYACTPEEVQQHF 2
EKEMG DSRS+FVGNVDYACTPEEVQQHF
Sbjct: 68 EKEMGAVQDPAGATANQASKEEADSRSVFVGNVDYACTPEEVQQHF 113
>gb|KHG00394.1| Polyadenylate-binding 2 [Gossypium arboreum]
Length = 221
Score = 77.4 bits (189), Expect = 3e-12
Identities = 50/106 (47%), Positives = 53/106 (50%), Gaps = 11/106 (10%)
Frame = -3
Query: 286 VYGGEIPDEGEY---IDPHNADVEMSXXXXXXXXX--------KXXXXXXXXXXXXXAKV 140
VYGGEIPDEGE +DP NADV+MS K AKV
Sbjct: 8 VYGGEIPDEGEMEGELDPQNADVDMSAADEDAVKELDEMKKRLKEMEDEAAALREMQAKV 67
Query: 139 EKEMGXXXXXXXXXXXXXXXXXXDSRSIFVGNVDYACTPEEVQQHF 2
EKEMG DSRS+FVGNVDYACTPEEVQQHF
Sbjct: 68 EKEMGAVQDPAGATANQASKEEADSRSVFVGNVDYACTPEEVQQHF 113
>ref|XP_011031058.1| PREDICTED: polyadenylate-binding protein 3-like isoform X1 [Populus
euphratica]
Length = 218
Score = 76.3 bits (186), Expect = 8e-12
Identities = 48/103 (46%), Positives = 51/103 (49%), Gaps = 8/103 (7%)
Frame = -3
Query: 286 VYGGEIPDEGEYIDPHNADVEMSXXXXXXXXX--------KXXXXXXXXXXXXXAKVEKE 131
VYGGEIPD +DPHNADV+MS K AKVEKE
Sbjct: 8 VYGGEIPDVEGDMDPHNADVDMSAADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKE 67
Query: 130 MGXXXXXXXXXXXXXXXXXXDSRSIFVGNVDYACTPEEVQQHF 2
MG DSRS+FVGNVDYACTPEEVQQHF
Sbjct: 68 MGAVQDPATAAANQANREEADSRSVFVGNVDYACTPEEVQQHF 110
>ref|XP_011022817.1| PREDICTED: polyadenylate-binding protein 2-like isoform X1 [Populus
euphratica]
Length = 218
Score = 76.3 bits (186), Expect = 8e-12
Identities = 48/103 (46%), Positives = 51/103 (49%), Gaps = 8/103 (7%)
Frame = -3
Query: 286 VYGGEIPDEGEYIDPHNADVEMSXXXXXXXXX--------KXXXXXXXXXXXXXAKVEKE 131
VYGGEIPD +DPHNADV+MS K AKVEKE
Sbjct: 8 VYGGEIPDVEGDMDPHNADVDMSAAEDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKE 67
Query: 130 MGXXXXXXXXXXXXXXXXXXDSRSIFVGNVDYACTPEEVQQHF 2
MG DSRS+FVGNVDYACTPEEVQQHF
Sbjct: 68 MGAVPDPASAAANQANKEEADSRSVFVGNVDYACTPEEVQQHF 110
>ref|XP_002306300.1| hypothetical protein POPTR_0005s07440g [Populus trichocarpa]
gi|222855749|gb|EEE93296.1| hypothetical protein
POPTR_0005s07440g [Populus trichocarpa]
Length = 218
Score = 76.3 bits (186), Expect = 8e-12
Identities = 48/103 (46%), Positives = 51/103 (49%), Gaps = 8/103 (7%)
Frame = -3
Query: 286 VYGGEIPDEGEYIDPHNADVEMSXXXXXXXXX--------KXXXXXXXXXXXXXAKVEKE 131
VYGGEIPD +DPHNADV+MS K AKVEKE
Sbjct: 8 VYGGEIPDVEGDMDPHNADVDMSAADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKE 67
Query: 130 MGXXXXXXXXXXXXXXXXXXDSRSIFVGNVDYACTPEEVQQHF 2
MG DSRS+FVGNVDYACTPEEVQQHF
Sbjct: 68 MGAVQDPATAAANQANREEADSRSVFVGNVDYACTPEEVQQHF 110
>ref|XP_002309968.1| hypothetical protein POPTR_0007s05140g [Populus trichocarpa]
gi|222852871|gb|EEE90418.1| hypothetical protein
POPTR_0007s05140g [Populus trichocarpa]
Length = 218
Score = 76.3 bits (186), Expect = 8e-12
Identities = 48/103 (46%), Positives = 51/103 (49%), Gaps = 8/103 (7%)
Frame = -3
Query: 286 VYGGEIPDEGEYIDPHNADVEMSXXXXXXXXX--------KXXXXXXXXXXXXXAKVEKE 131
VYGGEIPD +DPHNADV+MS K AKVEKE
Sbjct: 8 VYGGEIPDVEGDMDPHNADVDMSAAEDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKE 67
Query: 130 MGXXXXXXXXXXXXXXXXXXDSRSIFVGNVDYACTPEEVQQHF 2
MG DSRS+FVGNVDYACTPEEVQQHF
Sbjct: 68 MGAVPDPASAAANQANKEEADSRSVFVGNVDYACTPEEVQQHF 110
>ref|XP_003635560.2| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
Length = 221
Score = 75.9 bits (185), Expect = 1e-11
Identities = 49/106 (46%), Positives = 53/106 (50%), Gaps = 11/106 (10%)
Frame = -3
Query: 286 VYGGEIPDEGEY---IDPHNADVEMSXXXXXXXXX--------KXXXXXXXXXXXXXAKV 140
VYGGEIPDEGE +D HNADV+M+ K AKV
Sbjct: 8 VYGGEIPDEGEMEGDMDAHNADVDMATNDDDAVKELDEMKKRLKEMEEEAAALREMQAKV 67
Query: 139 EKEMGXXXXXXXXXXXXXXXXXXDSRSIFVGNVDYACTPEEVQQHF 2
EKEMG DSRS+FVGNVDYACTPEEVQQHF
Sbjct: 68 EKEMGAVQDPASAAVTQANKEEADSRSVFVGNVDYACTPEEVQQHF 113
>ref|XP_012081610.1| PREDICTED: polyadenylate-binding protein 2 [Jatropha curcas]
gi|802673500|ref|XP_012081611.1| PREDICTED:
polyadenylate-binding protein 2 [Jatropha curcas]
Length = 218
Score = 75.1 bits (183), Expect = 2e-11
Identities = 47/103 (45%), Positives = 51/103 (49%), Gaps = 8/103 (7%)
Frame = -3
Query: 286 VYGGEIPDEGEYIDPHNADVEMSXXXXXXXXX--------KXXXXXXXXXXXXXAKVEKE 131
VYGGEIPD +DPHNADV+M+ K AKVEKE
Sbjct: 8 VYGGEIPDVEGDMDPHNADVDMAAADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKE 67
Query: 130 MGXXXXXXXXXXXXXXXXXXDSRSIFVGNVDYACTPEEVQQHF 2
MG DSRS+FVGNVDYACTPEEVQQHF
Sbjct: 68 MGAVQDPASAAVNQANREEADSRSVFVGNVDYACTPEEVQQHF 110
>emb|CDP01496.1| unnamed protein product [Coffea canephora]
Length = 221
Score = 74.7 bits (182), Expect = 2e-11
Identities = 49/106 (46%), Positives = 53/106 (50%), Gaps = 11/106 (10%)
Frame = -3
Query: 286 VYGGEIPDEGEY---IDPHNADVEMSXXXXXXXXX--------KXXXXXXXXXXXXXAKV 140
VYGGEIPDEGE +DP++ DV+MS K AKV
Sbjct: 8 VYGGEIPDEGEMEGDLDPNSGDVDMSTADDDAVKELDEMKKRLKEMEEEAAALREMQAKV 67
Query: 139 EKEMGXXXXXXXXXXXXXXXXXXDSRSIFVGNVDYACTPEEVQQHF 2
EKEMG DSRSIFVGNVDYACTPEEVQQHF
Sbjct: 68 EKEMGAVQDPASAAASQANKEEVDSRSIFVGNVDYACTPEEVQQHF 113
>ref|XP_002531675.1| poly-A binding protein, putative [Ricinus communis]
gi|223528706|gb|EEF30719.1| poly-A binding protein,
putative [Ricinus communis]
Length = 218
Score = 74.7 bits (182), Expect = 2e-11
Identities = 47/103 (45%), Positives = 50/103 (48%), Gaps = 8/103 (7%)
Frame = -3
Query: 286 VYGGEIPDEGEYIDPHNADVEMSXXXXXXXXX--------KXXXXXXXXXXXXXAKVEKE 131
VYGGEIPD IDPHN D++MS K AKVEKE
Sbjct: 8 VYGGEIPDMEGDIDPHNVDMDMSAADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKE 67
Query: 130 MGXXXXXXXXXXXXXXXXXXDSRSIFVGNVDYACTPEEVQQHF 2
MG DSRS+FVGNVDYACTPEEVQQHF
Sbjct: 68 MGAVQDPASAAANQANKEETDSRSVFVGNVDYACTPEEVQQHF 110
>ref|XP_010937393.1| PREDICTED: polyadenylate-binding protein 2 isoform X4 [Elaeis
guineensis]
Length = 219
Score = 74.3 bits (181), Expect = 3e-11
Identities = 48/104 (46%), Positives = 52/104 (50%), Gaps = 9/104 (8%)
Frame = -3
Query: 286 VYGGEIPDEGEY---IDPHNADVEMSXXXXXXXXX------KXXXXXXXXXXXXXAKVEK 134
VYG +IPDEGE IDPH ADV+M+ K AKVEK
Sbjct: 8 VYGQDIPDEGEMEGDIDPHGADVDMTRADDDAELDEMKKRLKEMEEEAAALREMQAKVEK 67
Query: 133 EMGXXXXXXXXXXXXXXXXXXDSRSIFVGNVDYACTPEEVQQHF 2
EMG DSRS+FVGNVDYACTPEEVQQHF
Sbjct: 68 EMGAVQDPASAAATQASREEVDSRSVFVGNVDYACTPEEVQQHF 111
>ref|XP_010937392.1| PREDICTED: polyadenylate-binding protein 2 isoform X3 [Elaeis
guineensis]
Length = 221
Score = 73.6 bits (179), Expect = 5e-11
Identities = 48/106 (45%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Frame = -3
Query: 286 VYGGEIPDEGEY---IDPHNADVEMSXXXXXXXXX--------KXXXXXXXXXXXXXAKV 140
VYG +IPDEGE IDPH ADV+M+ K AKV
Sbjct: 8 VYGQDIPDEGEMEGDIDPHGADVDMTRADDDAVKELDEMKKRLKEMEEEAAALREMQAKV 67
Query: 139 EKEMGXXXXXXXXXXXXXXXXXXDSRSIFVGNVDYACTPEEVQQHF 2
EKEMG DSRS+FVGNVDYACTPEEVQQHF
Sbjct: 68 EKEMGAVQDPASAAATQASREEVDSRSVFVGNVDYACTPEEVQQHF 113
>ref|XP_008777640.1| PREDICTED: polyadenylate-binding protein 2-like [Phoenix
dactylifera]
Length = 221
Score = 73.6 bits (179), Expect = 5e-11
Identities = 48/106 (45%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Frame = -3
Query: 286 VYGGEIPDEGEY---IDPHNADVEMSXXXXXXXXX--------KXXXXXXXXXXXXXAKV 140
VYG +IPDEGE IDPH ADV+M+ K AKV
Sbjct: 8 VYGQDIPDEGEMEGDIDPHGADVDMTRADDDAVKELDEMKKRLKDMEEEATALREMQAKV 67
Query: 139 EKEMGXXXXXXXXXXXXXXXXXXDSRSIFVGNVDYACTPEEVQQHF 2
EKEMG DSRS+FVGNVDYACTPEEVQQHF
Sbjct: 68 EKEMGAVQDPASAAATQASREEVDSRSVFVGNVDYACTPEEVQQHF 113
>ref|XP_007205858.1| hypothetical protein PRUPE_ppa011157mg [Prunus persica]
gi|645219284|ref|XP_008234985.1| PREDICTED:
polyadenylate-binding protein 2 isoform X1 [Prunus mume]
gi|462401500|gb|EMJ07057.1| hypothetical protein
PRUPE_ppa011157mg [Prunus persica]
Length = 221
Score = 73.6 bits (179), Expect = 5e-11
Identities = 48/106 (45%), Positives = 53/106 (50%), Gaps = 11/106 (10%)
Frame = -3
Query: 286 VYGGEIPDEGEY---IDPHNADVEMSXXXXXXXXX--------KXXXXXXXXXXXXXAKV 140
VYGGEIPDEGE I+ H+ADV+MS K AKV
Sbjct: 8 VYGGEIPDEGEMEGDIEAHHADVDMSTADDDAVKELDEMKKRLKEMEEEAAALREMQAKV 67
Query: 139 EKEMGXXXXXXXXXXXXXXXXXXDSRSIFVGNVDYACTPEEVQQHF 2
EKEMG D+RS+FVGNVDYACTPEEVQQHF
Sbjct: 68 EKEMGAVQDPAAVAASQANKEEVDARSVFVGNVDYACTPEEVQQHF 113
>ref|XP_006353217.1| PREDICTED: polyadenylate-binding protein 2-A-like isoform X1
[Solanum tuberosum]
Length = 218
Score = 72.0 bits (175), Expect = 1e-10
Identities = 47/103 (45%), Positives = 52/103 (50%), Gaps = 8/103 (7%)
Frame = -3
Query: 286 VYGGEIPDEGEYIDPHNADVEMSXXXXXXXXX--------KXXXXXXXXXXXXXAKVEKE 131
VYGGEIP EG+ ++PH ADV+M+ K AKVEKE
Sbjct: 8 VYGGEIPIEGD-MEPHGADVDMATADDDAVKELDEMKKRLKEMEDEAAALREMQAKVEKE 66
Query: 130 MGXXXXXXXXXXXXXXXXXXDSRSIFVGNVDYACTPEEVQQHF 2
MG DSRSIFVGNVDYACTPEEVQQHF
Sbjct: 67 MGSVQDPASTAASQENREEVDSRSIFVGNVDYACTPEEVQQHF 109
>ref|XP_008381986.1| PREDICTED: polyadenylate-binding protein 2 isoform X1 [Malus
domestica]
Length = 220
Score = 71.6 bits (174), Expect = 2e-10
Identities = 47/106 (44%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Frame = -3
Query: 286 VYGGEIPDEGEY---IDPHNADVEMSXXXXXXXXX--------KXXXXXXXXXXXXXAKV 140
VYG EIPDEGE +D H+ADV+MS K AKV
Sbjct: 8 VYGAEIPDEGELDGDMDAHHADVDMSTADVAAVKELDEMKKRLKEMEEEAAALREMQAKV 67
Query: 139 EKEMGXXXXXXXXXXXXXXXXXXDSRSIFVGNVDYACTPEEVQQHF 2
EKEMG D+RS+FVGNVDYACTPEEVQQHF
Sbjct: 68 EKEMGAVQDPAIAAASQANREEVDARSVFVGNVDYACTPEEVQQHF 113
>gb|KDO60716.1| hypothetical protein CISIN_1g041633mg [Citrus sinensis]
Length = 237
Score = 71.6 bits (174), Expect = 2e-10
Identities = 46/103 (44%), Positives = 49/103 (47%), Gaps = 8/103 (7%)
Frame = -3
Query: 286 VYGGEIPDEGEYIDPHNADVEMSXXXXXXXXX--------KXXXXXXXXXXXXXAKVEKE 131
VYGGEIPD +D HN DV+MS K AKVEKE
Sbjct: 8 VYGGEIPDVEGDMDAHNTDVDMSAADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKE 67
Query: 130 MGXXXXXXXXXXXXXXXXXXDSRSIFVGNVDYACTPEEVQQHF 2
MG DSRS+FVGNVDYACTPEEVQQHF
Sbjct: 68 MGAAQDPANVAANQASKEEADSRSVFVGNVDYACTPEEVQQHF 110