BLASTX nr result

ID: Forsythia23_contig00017009 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia23_contig00017009
         (657 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004240397.1| PREDICTED: uncharacterized protein LOC101264...    61   5e-07
gb|AEK71532.1| hypothetical chloroplast RF2 [Ochna mossambicensis]     42   2e-06
gb|AEK71853.1| hypothetical chloroplast RF2 [Cissus rotundifolia]      42   4e-06

>ref|XP_004240397.1| PREDICTED: uncharacterized protein LOC101264428 [Solanum
           lycopersicum]
          Length = 169

 Score = 61.2 bits (147), Expect = 5e-07
 Identities = 33/61 (54%), Positives = 40/61 (65%)
 Frame = -2

Query: 185 ISSVNIFPR*KDSFSEQLTKKIFFQRQEFLLVQKLVYNGSKAAEEFMETEYYSDLNCIDK 6
           +  +N++P   D+  E L     FQR E    QKLVYNGS+  EEF+ETEYY DLNCIDK
Sbjct: 53  VDHINLYPSSHDTIPENLE----FQRLEND-PQKLVYNGSQVTEEFIETEYYKDLNCIDK 107

Query: 5   Q 3
           Q
Sbjct: 108 Q 108


>gb|AEK71532.1| hypothetical chloroplast RF2 [Ochna mossambicensis]
          Length = 2264

 Score = 42.0 bits (97), Expect(2) = 2e-06
 Identities = 18/24 (75%), Positives = 19/24 (79%)
 Frame = +2

Query: 524  QTRRPRSIHKRWFIKNTQGKHFRL 595
            QT  P SI+KRWFIKNTQ KHF L
Sbjct: 2178 QTNPPTSIYKRWFIKNTQEKHFEL 2201



 Score = 36.6 bits (83), Expect(2) = 2e-06
 Identities = 19/32 (59%), Positives = 25/32 (78%), Gaps = 3/32 (9%)
 Frame = +3

Query: 441  FFISKD---LSVFSHRELFAHEKISKRLLTSK 527
            FF+ KD   +SVFSH+E FA E++SK LLTS+
Sbjct: 2147 FFLFKDPPFVSVFSHQEFFADEEMSKGLLTSQ 2178


>gb|AEK71853.1| hypothetical chloroplast RF2 [Cissus rotundifolia]
          Length = 2307

 Score = 42.0 bits (97), Expect(2) = 4e-06
 Identities = 20/30 (66%), Positives = 22/30 (73%)
 Frame = +2

Query: 524  QTRRPRSIHKRWFIKNTQGKHFRLPDCRKR 613
            QT  P SI+KRWFIKNTQ KHF L   R+R
Sbjct: 2219 QTDPPTSIYKRWFIKNTQEKHFELLIHRQR 2248



 Score = 35.8 bits (81), Expect(2) = 4e-06
 Identities = 20/38 (52%), Positives = 25/38 (65%), Gaps = 9/38 (23%)
 Frame = +3

Query: 441  FFISKD---------LSVFSHRELFAHEKISKRLLTSK 527
            FF+ KD         +SVFSHRE FA E++SK LLTS+
Sbjct: 2182 FFLFKDQPFVSVFSHVSVFSHREFFADEEMSKGLLTSQ 2219


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