BLASTX nr result
ID: Forsythia23_contig00017009
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Forsythia23_contig00017009 (657 letters) Database: ./nr 69,698,275 sequences; 24,982,196,650 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004240397.1| PREDICTED: uncharacterized protein LOC101264... 61 5e-07 gb|AEK71532.1| hypothetical chloroplast RF2 [Ochna mossambicensis] 42 2e-06 gb|AEK71853.1| hypothetical chloroplast RF2 [Cissus rotundifolia] 42 4e-06 >ref|XP_004240397.1| PREDICTED: uncharacterized protein LOC101264428 [Solanum lycopersicum] Length = 169 Score = 61.2 bits (147), Expect = 5e-07 Identities = 33/61 (54%), Positives = 40/61 (65%) Frame = -2 Query: 185 ISSVNIFPR*KDSFSEQLTKKIFFQRQEFLLVQKLVYNGSKAAEEFMETEYYSDLNCIDK 6 + +N++P D+ E L FQR E QKLVYNGS+ EEF+ETEYY DLNCIDK Sbjct: 53 VDHINLYPSSHDTIPENLE----FQRLEND-PQKLVYNGSQVTEEFIETEYYKDLNCIDK 107 Query: 5 Q 3 Q Sbjct: 108 Q 108 >gb|AEK71532.1| hypothetical chloroplast RF2 [Ochna mossambicensis] Length = 2264 Score = 42.0 bits (97), Expect(2) = 2e-06 Identities = 18/24 (75%), Positives = 19/24 (79%) Frame = +2 Query: 524 QTRRPRSIHKRWFIKNTQGKHFRL 595 QT P SI+KRWFIKNTQ KHF L Sbjct: 2178 QTNPPTSIYKRWFIKNTQEKHFEL 2201 Score = 36.6 bits (83), Expect(2) = 2e-06 Identities = 19/32 (59%), Positives = 25/32 (78%), Gaps = 3/32 (9%) Frame = +3 Query: 441 FFISKD---LSVFSHRELFAHEKISKRLLTSK 527 FF+ KD +SVFSH+E FA E++SK LLTS+ Sbjct: 2147 FFLFKDPPFVSVFSHQEFFADEEMSKGLLTSQ 2178 >gb|AEK71853.1| hypothetical chloroplast RF2 [Cissus rotundifolia] Length = 2307 Score = 42.0 bits (97), Expect(2) = 4e-06 Identities = 20/30 (66%), Positives = 22/30 (73%) Frame = +2 Query: 524 QTRRPRSIHKRWFIKNTQGKHFRLPDCRKR 613 QT P SI+KRWFIKNTQ KHF L R+R Sbjct: 2219 QTDPPTSIYKRWFIKNTQEKHFELLIHRQR 2248 Score = 35.8 bits (81), Expect(2) = 4e-06 Identities = 20/38 (52%), Positives = 25/38 (65%), Gaps = 9/38 (23%) Frame = +3 Query: 441 FFISKD---------LSVFSHRELFAHEKISKRLLTSK 527 FF+ KD +SVFSHRE FA E++SK LLTS+ Sbjct: 2182 FFLFKDQPFVSVFSHVSVFSHREFFADEEMSKGLLTSQ 2219