BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia23_contig00014917
         (1004 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012845599.1| PREDICTED: pentatricopeptide repeat-containi...   480   e-133
gb|EYU30557.1| hypothetical protein MIMGU_mgv1a020178mg, partial...   480   e-133
ref|XP_011093223.1| PREDICTED: pentatricopeptide repeat-containi...   479   e-132
ref|XP_006347873.1| PREDICTED: pentatricopeptide repeat-containi...   455   e-125
dbj|BAQ55935.1| pentatricopeptide repeat protein [Nicotiana sylv...   452   e-124
ref|XP_009772120.1| PREDICTED: pentatricopeptide repeat-containi...   452   e-124
dbj|BAQ55936.1| pentatricopeptide repeat protein [Nicotiana tome...   449   e-123
ref|XP_009629430.1| PREDICTED: pentatricopeptide repeat-containi...   449   e-123
ref|XP_004229808.1| PREDICTED: pentatricopeptide repeat-containi...   447   e-123
ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containi...   443   e-121
emb|CDO97694.1| unnamed protein product [Coffea canephora]            432   e-118
emb|CAN72187.1| hypothetical protein VITISV_012899 [Vitis vinifera]   427   e-117
gb|AKH05179.1| chlororespiratory reduction 4 [Francoa sonchifolia]    416   e-113
ref|XP_002320719.2| pentatricopeptide repeat-containing family p...   410   e-112
ref|XP_011034218.1| PREDICTED: pentatricopeptide repeat-containi...   410   e-111
ref|XP_006490914.1| PREDICTED: pentatricopeptide repeat-containi...   406   e-110
ref|XP_006445271.1| hypothetical protein CICLE_v10023562mg, part...   406   e-110
ref|XP_007052071.1| Pentatricopeptide repeat (PPR) superfamily p...   405   e-110
gb|AHB18411.1| pentatricopeptide repeat-containing protein [Goss...   404   e-110
gb|AKH05190.1| chlororespiratory reduction 4, partial [Pelargoni...   402   e-109

>ref|XP_012845599.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
            chloroplastic [Erythranthe guttatus]
          Length = 613

 Score =  480 bits (1236), Expect = e-133
 Identities = 231/339 (68%), Positives = 273/339 (80%), Gaps = 5/339 (1%)
 Frame = -3

Query: 1002 MIDGYVKCGMVSSAQELFDLMPLEMKNLITWNTLISGYVKLENGFEVASDLFEKMPERDL 823
            MIDGYVKCGMVS+A+ELFD+MP ++KNL++WN++ISGYVKLENGFE A DLF+KMPERDL
Sbjct: 187  MIDGYVKCGMVSAARELFDIMPSDVKNLVSWNSMISGYVKLENGFEYAWDLFDKMPERDL 246

Query: 822  ISWNLMIDCCVKNGKLEMASLLFDKMPERDVISWATMVDGYAKIGNVDVARGFFDAMPQR 643
            +SWNLM+DCC KNG + +A  LFDKM +RDV+SWA+MVDGYAK+GNVD AR FFDAMPQR
Sbjct: 247  VSWNLMLDCCAKNGNMNLAQNLFDKMSKRDVVSWASMVDGYAKVGNVDAARYFFDAMPQR 306

Query: 642  DVISCNALMVGYVKSGRCKEALKVFHDMLSASGFDLAPDSVTLLTALSAIAQLGCIDEGV 463
            DVISCNA+M GYV +G   EALKVFHDML   GF LAPDSVTLLTALSA  QL CI+EG+
Sbjct: 307  DVISCNAMMAGYVNNGCYNEALKVFHDML-GGGFGLAPDSVTLLTALSATTQLNCINEGI 365

Query: 462  SIHRYMEDHGFLVSGKIGVALIDMYAKCGSIK-----XXXXXXXXXXXXXXXXXXXXXXX 298
            +IHRY++ H F  +GK+GV LIDMYAKCG+I+                            
Sbjct: 366  AIHRYIQKHRFATNGKLGVTLIDMYAKCGTIEQAMRVFEGVQDKSIDHWNAMIGGLAIHG 425

Query: 297  XXXLAFDLFMEMERLHLEPDDITFIAVLNACGHAGLVKEGVVCFEIMRRLHKMVPKLQHY 118
               LAFDLFM+MERL L+PDDITF+AVL+ACGH+G++KEG+VCFEIMRR H++VPKLQHY
Sbjct: 426  LGYLAFDLFMKMERLSLKPDDITFVAVLHACGHSGMIKEGLVCFEIMRRFHRIVPKLQHY 485

Query: 117  GCMVDILGRAGHVEAATRFVKEMPIEPNDVVWRTLLSAC 1
            GCMVDIL R G +EAA +FVKEMP+ PNDVVWRTLLSAC
Sbjct: 486  GCMVDILSRGGQIEAAAKFVKEMPVPPNDVVWRTLLSAC 524


>gb|EYU30557.1| hypothetical protein MIMGU_mgv1a020178mg, partial [Erythranthe
            guttata]
          Length = 568

 Score =  480 bits (1236), Expect = e-133
 Identities = 231/339 (68%), Positives = 273/339 (80%), Gaps = 5/339 (1%)
 Frame = -3

Query: 1002 MIDGYVKCGMVSSAQELFDLMPLEMKNLITWNTLISGYVKLENGFEVASDLFEKMPERDL 823
            MIDGYVKCGMVS+A+ELFD+MP ++KNL++WN++ISGYVKLENGFE A DLF+KMPERDL
Sbjct: 160  MIDGYVKCGMVSAARELFDIMPSDVKNLVSWNSMISGYVKLENGFEYAWDLFDKMPERDL 219

Query: 822  ISWNLMIDCCVKNGKLEMASLLFDKMPERDVISWATMVDGYAKIGNVDVARGFFDAMPQR 643
            +SWNLM+DCC KNG + +A  LFDKM +RDV+SWA+MVDGYAK+GNVD AR FFDAMPQR
Sbjct: 220  VSWNLMLDCCAKNGNMNLAQNLFDKMSKRDVVSWASMVDGYAKVGNVDAARYFFDAMPQR 279

Query: 642  DVISCNALMVGYVKSGRCKEALKVFHDMLSASGFDLAPDSVTLLTALSAIAQLGCIDEGV 463
            DVISCNA+M GYV +G   EALKVFHDML   GF LAPDSVTLLTALSA  QL CI+EG+
Sbjct: 280  DVISCNAMMAGYVNNGCYNEALKVFHDML-GGGFGLAPDSVTLLTALSATTQLNCINEGI 338

Query: 462  SIHRYMEDHGFLVSGKIGVALIDMYAKCGSIK-----XXXXXXXXXXXXXXXXXXXXXXX 298
            +IHRY++ H F  +GK+GV LIDMYAKCG+I+                            
Sbjct: 339  AIHRYIQKHRFATNGKLGVTLIDMYAKCGTIEQAMRVFEGVQDKSIDHWNAMIGGLAIHG 398

Query: 297  XXXLAFDLFMEMERLHLEPDDITFIAVLNACGHAGLVKEGVVCFEIMRRLHKMVPKLQHY 118
               LAFDLFM+MERL L+PDDITF+AVL+ACGH+G++KEG+VCFEIMRR H++VPKLQHY
Sbjct: 399  LGYLAFDLFMKMERLSLKPDDITFVAVLHACGHSGMIKEGLVCFEIMRRFHRIVPKLQHY 458

Query: 117  GCMVDILGRAGHVEAATRFVKEMPIEPNDVVWRTLLSAC 1
            GCMVDIL R G +EAA +FVKEMP+ PNDVVWRTLLSAC
Sbjct: 459  GCMVDILSRGGQIEAAAKFVKEMPVPPNDVVWRTLLSAC 497


>ref|XP_011093223.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
            chloroplastic [Sesamum indicum]
          Length = 627

 Score =  479 bits (1232), Expect = e-132
 Identities = 234/339 (69%), Positives = 279/339 (82%), Gaps = 5/339 (1%)
 Frame = -3

Query: 1002 MIDGYVKCGMVSSAQELFDLMPLEMKNLITWNTLISGYVKLENGFEVASDLFEKMPERDL 823
            MIDGYVKCGMVS A+ELFD+MP E+KNL++WNT+I+GY+KLE+GFE A DLF+KMP+RDL
Sbjct: 186  MIDGYVKCGMVSLARELFDMMPSELKNLVSWNTMINGYLKLEDGFECAWDLFDKMPDRDL 245

Query: 822  ISWNLMIDCCVKNGKLEMASLLFDKMPERDVISWATMVDGYAKIGNVDVARGFFDAMPQR 643
            +SWNLM+D C KNGK+ +A +LFD+MPERDV+SWA+MVDGYAK+GNV+ AR FFDAMP R
Sbjct: 246  VSWNLMVDFCAKNGKMGLAQVLFDRMPERDVVSWASMVDGYAKVGNVEAARRFFDAMP-R 304

Query: 642  DVISCNALMVGYVKSGRCKEALKVFHDMLSASGFDLAPDSVTLLTALSAIAQLGCIDEGV 463
            DVISCNA+M GYV +G  +EAL VFHDML  +  DLAPDSVTLLTALSA  +LGCIDEG+
Sbjct: 305  DVISCNAMMTGYVNNGYYEEALNVFHDMLGNTS-DLAPDSVTLLTALSATTKLGCIDEGI 363

Query: 462  SIHRYMEDHGFLVSGKIGVALIDMYAKCGSIK-----XXXXXXXXXXXXXXXXXXXXXXX 298
            +IH+YME++GF VSGK+ VAL+DMYAKCGSI+                            
Sbjct: 364  AIHQYMEENGFSVSGKLSVALLDMYAKCGSIEQALYVFEGVQEKNIDHWNAMIGALAIHG 423

Query: 297  XXXLAFDLFMEMERLHLEPDDITFIAVLNACGHAGLVKEGVVCFEIMRRLHKMVPKLQHY 118
               LAFDLFMEME L LEPDDITFIAVL+ACGH+G+VKEG+VCFEIMRR+H++VPKLQHY
Sbjct: 424  LGELAFDLFMEMEGLSLEPDDITFIAVLHACGHSGMVKEGLVCFEIMRRVHRIVPKLQHY 483

Query: 117  GCMVDILGRAGHVEAATRFVKEMPIEPNDVVWRTLLSAC 1
            GCMVDIL RAGH+E A +FV+EMPI+PNDVVWRTLLSAC
Sbjct: 484  GCMVDILSRAGHLEEAAKFVEEMPIQPNDVVWRTLLSAC 522



 Score = 65.9 bits (159), Expect = 4e-08
 Identities = 69/286 (24%), Positives = 121/286 (42%), Gaps = 11/286 (3%)
 Frame = -3

Query: 828 DLISWNLMIDCCVKNGKLEMASLLFDKMPERDVISWATMVDGYAKIGNVDVARGFFDAMP 649
           D+   N +I   VK G +++   +FD+M  +D  S+  M+DGY K G V +AR  FD MP
Sbjct: 148 DVFLQNCLISMYVKCGIVQLGRQVFDRMIRKDSFSYNLMIDGYVKCGMVSLARELFDMMP 207

Query: 648 Q--RDVISCNALMVGYVKSGRCKEALKVFHDMLSASGFDLAPDS--VTLLTALSAIAQLG 481
              ++++S N ++ GY+K    ++  +   D+     FD  PD   V+    +   A+ G
Sbjct: 208 SELKNLVSWNTMINGYLK---LEDGFECAWDL-----FDKMPDRDLVSWNLMVDFCAKNG 259

Query: 480 CIDEGVSIHRYMEDHGFLVSGKIGVALIDMYAKCGSI----KXXXXXXXXXXXXXXXXXX 313
            +     +   M +   +       +++D YAK G++    +                  
Sbjct: 260 KMGLAQVLFDRMPERDVV----SWASMVDGYAKVGNVEAARRFFDAMPRDVISCNAMMTG 315

Query: 312 XXXXXXXXLAFDLFMEM--ERLHLEPDDITFIAVLNACGHAGLVKEGVVCFEIMRRLHKM 139
                    A ++F +M      L PD +T +  L+A    G + EG+   + M      
Sbjct: 316 YVNNGYYEEALNVFHDMLGNTSDLAPDSVTLLTALSATTKLGCIDEGIAIHQYMEENGFS 375

Query: 138 VP-KLQHYGCMVDILGRAGHVEAATRFVKEMPIEPNDVVWRTLLSA 4
           V  KL     ++D+  + G +E A  +V E   E N   W  ++ A
Sbjct: 376 VSGKLS--VALLDMYAKCGSIEQAL-YVFEGVQEKNIDHWNAMIGA 418


>ref|XP_006347873.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
            chloroplastic-like [Solanum tuberosum]
          Length = 625

 Score =  455 bits (1171), Expect = e-125
 Identities = 221/339 (65%), Positives = 265/339 (78%), Gaps = 5/339 (1%)
 Frame = -3

Query: 1002 MIDGYVKCGMVSSAQELFDLMPLEMKNLITWNTLISGYVKLENGFEVASDLFEKMPERDL 823
            MIDGYVKCGM+  A  LFD MP+EM+NL++WN +++GYVKL+ GF+VA +LF+KMPERDL
Sbjct: 194  MIDGYVKCGMLDVACRLFDFMPIEMRNLVSWNAMLTGYVKLDQGFDVAWELFDKMPERDL 253

Query: 822  ISWNLMIDCCVKNGKLEMASLLFDKMPERDVISWATMVDGYAKIGNVDVARGFFDAMPQR 643
            +SWNLM+ CCVK+G  E A+ LFD +P++DV+SWA MVDGYAKIG +D+AR +FD MP R
Sbjct: 254  VSWNLMLYCCVKSGNAEKATALFDMIPKKDVVSWAIMVDGYAKIGKIDIARRYFDDMPVR 313

Query: 642  DVISCNALMVGYVKSGRCKEALKVFHDMLSASGFDLAPDSVTLLTALSAIAQLGCIDEGV 463
            DVISCNA+M GYVK+G C EALKVFHDML   G  LAPDS T L ALSA+A+LG IDEG+
Sbjct: 314  DVISCNAIMAGYVKNGHCLEALKVFHDML--RGNSLAPDSTTALLALSAVAELGYIDEGI 371

Query: 462  SIHRYMEDHGFLVSGKIGVALIDMYAKCGSIK-----XXXXXXXXXXXXXXXXXXXXXXX 298
            ++H Y+E++GFLV+GK+GVALIDMYAKCGSI                             
Sbjct: 372  ALHCYIEENGFLVAGKLGVALIDMYAKCGSIDSAMGVFNDIQEKNVDHWNAMIGGLAIHG 431

Query: 297  XXXLAFDLFMEMERLHLEPDDITFIAVLNACGHAGLVKEGVVCFEIMRRLHKMVPKLQHY 118
               +AF+LFMEMERL L+ DDITFIAVLNAC H+GLVKEG++CFEIMRR H+M PKLQHY
Sbjct: 432  FGDVAFELFMEMERLSLDIDDITFIAVLNACAHSGLVKEGMICFEIMRRAHRMEPKLQHY 491

Query: 117  GCMVDILGRAGHVEAATRFVKEMPIEPNDVVWRTLLSAC 1
            GCMVDIL RAGHVE A +FV EMPI PNDVVWRTLLS+C
Sbjct: 492  GCMVDILSRAGHVEEAIKFVDEMPIHPNDVVWRTLLSSC 530



 Score = 65.1 bits (157), Expect = 8e-08
 Identities = 74/285 (25%), Positives = 122/285 (42%), Gaps = 12/285 (4%)
 Frame = -3

Query: 828 DLISWNLMIDCCVKNGKLEMASLLFDKMPERDVISWATMVDGYAKIGNVDVARGFFDAMP 649
           D+   N +I   V+ G +E    +FD+M  RD +S+ TM+DGY K G +DVA   FD MP
Sbjct: 156 DVFLQNCLISMYVRCGFVEYGHHVFDRMCLRDSVSYNTMIDGYVKCGMLDVACRLFDFMP 215

Query: 648 --QRDVISCNALMVGYVKSGRCKEALKVFHDMLSASGFDLAP--DSVTLLTALSAIAQLG 481
              R+++S NA++ GYVK     +   V  ++     FD  P  D V+    L    + G
Sbjct: 216 IEMRNLVSWNAMLTGYVK---LDQGFDVAWEL-----FDKMPERDLVSWNLMLYCCVKSG 267

Query: 480 CIDEGVSIHRYMEDHGFLVSGKIGVALIDMYAKCGSIK-----XXXXXXXXXXXXXXXXX 316
             ++  ++   +     +VS  I   ++D YAK G I                       
Sbjct: 268 NAEKATALFDMIPKKD-VVSWAI---MVDGYAKIGKIDIARRYFDDMPVRDVISCNAIMA 323

Query: 315 XXXXXXXXXLAFDLFMEMERLH-LEPDDITFIAVLNACGHAGLVKEGVV--CFEIMRRLH 145
                     A  +F +M R + L PD  T +  L+A    G + EG+   C+ I     
Sbjct: 324 GYVKNGHCLEALKVFHDMLRGNSLAPDSTTALLALSAVAELGYIDEGIALHCY-IEENGF 382

Query: 144 KMVPKLQHYGCMVDILGRAGHVEAATRFVKEMPIEPNDVVWRTLL 10
            +  KL     ++D+  + G +++A     ++  E N   W  ++
Sbjct: 383 LVAGKLG--VALIDMYAKCGSIDSAMGVFNDIQ-EKNVDHWNAMI 424


>dbj|BAQ55935.1| pentatricopeptide repeat protein [Nicotiana sylvestris]
          Length = 626

 Score =  452 bits (1163), Expect = e-124
 Identities = 223/339 (65%), Positives = 264/339 (77%), Gaps = 5/339 (1%)
 Frame = -3

Query: 1002 MIDGYVKCGMVSSAQELFDLMPLEMKNLITWNTLISGYVKLENGFEVASDLFEKMPERDL 823
            MIDGYVKCGM+  A  LFD MP EM+NL++WN +++GYVKL+ GF++A +LF+KMP+RDL
Sbjct: 195  MIDGYVKCGMLDVACCLFDFMPAEMRNLVSWNAMLTGYVKLDKGFDIAWELFDKMPKRDL 254

Query: 822  ISWNLMIDCCVKNGKLEMASLLFDKMPERDVISWATMVDGYAKIGNVDVARGFFDAMPQR 643
            +SWNLM+ CCVK+G +E A+ LFD MP++DV+SWA MVDGYAKIG VDVAR FFD MP+R
Sbjct: 255  VSWNLMLCCCVKSGNVEKATALFDVMPKKDVVSWAIMVDGYAKIGKVDVARRFFDDMPER 314

Query: 642  DVISCNALMVGYVKSGRCKEALKVFHDMLSASGFDLAPDSVTLLTALSAIAQLGCIDEGV 463
            DVISCNA+M GYVK+    E+LKVFHDML  S   LAPDS +LL ALSA+A+LG IDEG+
Sbjct: 315  DVISCNAIMAGYVKNSHYLESLKVFHDMLRES--SLAPDSTSLLIALSAVAELGYIDEGI 372

Query: 462  SIHRYMEDHGFLVSGKIGVALIDMYAKCGSIK-----XXXXXXXXXXXXXXXXXXXXXXX 298
            ++H Y+E+HGFLV+GK+GVALIDMYAKCGS+                             
Sbjct: 373  ALHCYVEEHGFLVAGKLGVALIDMYAKCGSVDSAMGLFNDIQEKTVDHWNAMIGGLAIHG 432

Query: 297  XXXLAFDLFMEMERLHLEPDDITFIAVLNACGHAGLVKEGVVCFEIMRRLHKMVPKLQHY 118
               LAF LFMEMERL LE DDITFIAVLNACGH+GLVKEG++CFEIMRR H M PKLQHY
Sbjct: 433  FGDLAFQLFMEMERLSLEIDDITFIAVLNACGHSGLVKEGMICFEIMRRAHHMEPKLQHY 492

Query: 117  GCMVDILGRAGHVEAATRFVKEMPIEPNDVVWRTLLSAC 1
            GCMVDIL RAGHVE A +FV EMPI PNDVVWRTLLS+C
Sbjct: 493  GCMVDILSRAGHVEEAIKFVNEMPIYPNDVVWRTLLSSC 531



 Score = 67.4 bits (163), Expect = 2e-08
 Identities = 67/270 (24%), Positives = 112/270 (41%), Gaps = 17/270 (6%)
 Frame = -3

Query: 828 DLISWNLMIDCCVKNGKLEMASLLFDKMPERDVISWATMVDGYAKIGNVDVARGFFDAMP 649
           DL   N +I   V+ G ++    +FD+M  RD +S+ TM+DGY K G +DVA   FD MP
Sbjct: 157 DLFLQNCLISMYVRCGCVDYGHQMFDRMLMRDSVSYNTMIDGYVKCGMLDVACCLFDFMP 216

Query: 648 --QRDVISCNALMVGYVKSGRCKEALKVFHDMLSASGFDLA---------PDSVTLLTAL 502
              R+++S NA++ GYVK  +               GFD+A          D V+    L
Sbjct: 217 AEMRNLVSWNAMLTGYVKLDK---------------GFDIAWELFDKMPKRDLVSWNLML 261

Query: 501 SAIAQLGCIDEGVSIHRYMEDHGFLVSGKIGVALIDMYAKCGSIK-----XXXXXXXXXX 337
               + G +++  ++   M     +VS  I   ++D YAK G +                
Sbjct: 262 CCCVKSGNVEKATALFDVMPKKD-VVSWAI---MVDGYAKIGKVDVARRFFDDMPERDVI 317

Query: 336 XXXXXXXXXXXXXXXXLAFDLFMEMER-LHLEPDDITFIAVLNACGHAGLVKEGVVCFEI 160
                            +  +F +M R   L PD  + +  L+A    G + EG+     
Sbjct: 318 SCNAIMAGYVKNSHYLESLKVFHDMLRESSLAPDSTSLLIALSAVAELGYIDEGIALHCY 377

Query: 159 MRRLHKMVPKLQHYGCMVDILGRAGHVEAA 70
           +   H  +   +    ++D+  + G V++A
Sbjct: 378 VEE-HGFLVAGKLGVALIDMYAKCGSVDSA 406


>ref|XP_009772120.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
            chloroplastic [Nicotiana sylvestris]
          Length = 626

 Score =  452 bits (1163), Expect = e-124
 Identities = 223/339 (65%), Positives = 264/339 (77%), Gaps = 5/339 (1%)
 Frame = -3

Query: 1002 MIDGYVKCGMVSSAQELFDLMPLEMKNLITWNTLISGYVKLENGFEVASDLFEKMPERDL 823
            MIDGYVKCGM+  A  LFD MP EM+NL++WN +++GYVKL+ GF++A +LF+KMP+RDL
Sbjct: 195  MIDGYVKCGMLDVACCLFDFMPAEMRNLVSWNAMLTGYVKLDKGFDIAWELFDKMPKRDL 254

Query: 822  ISWNLMIDCCVKNGKLEMASLLFDKMPERDVISWATMVDGYAKIGNVDVARGFFDAMPQR 643
            +SWNLM+ CCVK+G +E A+ LFD MP++DV+SWA MVDGYAKIG VDVAR FFD MP+R
Sbjct: 255  VSWNLMLCCCVKSGNVEKATALFDVMPKKDVVSWAIMVDGYAKIGKVDVARRFFDDMPER 314

Query: 642  DVISCNALMVGYVKSGRCKEALKVFHDMLSASGFDLAPDSVTLLTALSAIAQLGCIDEGV 463
            DVISCNA+M GYVK+    E+LKVFHDML  S   LAPDS +LL ALSA+A+LG IDEG+
Sbjct: 315  DVISCNAIMAGYVKNSHYLESLKVFHDMLRES--SLAPDSTSLLIALSAVAELGYIDEGI 372

Query: 462  SIHRYMEDHGFLVSGKIGVALIDMYAKCGSIK-----XXXXXXXXXXXXXXXXXXXXXXX 298
            ++H Y+E+HGFLV+GK+GVALIDMYAKCGS+                             
Sbjct: 373  ALHCYVEEHGFLVAGKLGVALIDMYAKCGSVDSAMGLFNDIQEKTVDHWNAMIGGLAIHG 432

Query: 297  XXXLAFDLFMEMERLHLEPDDITFIAVLNACGHAGLVKEGVVCFEIMRRLHKMVPKLQHY 118
               LAF LFMEMERL LE DDITFIAVLNACGH+GLVKEG++CFEIMRR H M PKLQHY
Sbjct: 433  FGDLAFQLFMEMERLSLEIDDITFIAVLNACGHSGLVKEGMICFEIMRRAHHMEPKLQHY 492

Query: 117  GCMVDILGRAGHVEAATRFVKEMPIEPNDVVWRTLLSAC 1
            GCMVDIL RAGHVE A +FV EMPI PNDVVWRTLLS+C
Sbjct: 493  GCMVDILSRAGHVEEAIKFVNEMPIYPNDVVWRTLLSSC 531



 Score = 67.4 bits (163), Expect = 2e-08
 Identities = 67/270 (24%), Positives = 112/270 (41%), Gaps = 17/270 (6%)
 Frame = -3

Query: 828 DLISWNLMIDCCVKNGKLEMASLLFDKMPERDVISWATMVDGYAKIGNVDVARGFFDAMP 649
           DL   N +I   V+ G ++    +FD+M  RD +S+ TM+DGY K G +DVA   FD MP
Sbjct: 157 DLFLQNCLISMYVRCGCVDYGHQMFDRMLMRDSVSYNTMIDGYVKCGMLDVACCLFDFMP 216

Query: 648 --QRDVISCNALMVGYVKSGRCKEALKVFHDMLSASGFDLA---------PDSVTLLTAL 502
              R+++S NA++ GYVK  +               GFD+A          D V+    L
Sbjct: 217 AEMRNLVSWNAMLTGYVKLDK---------------GFDIAWELFDKMPKRDLVSWNLML 261

Query: 501 SAIAQLGCIDEGVSIHRYMEDHGFLVSGKIGVALIDMYAKCGSIK-----XXXXXXXXXX 337
               + G +++  ++   M     +VS  I   ++D YAK G +                
Sbjct: 262 CCCVKSGNVEKATALFDVMPKKD-VVSWAI---MVDGYAKIGKVDVARRFFDDMPERDVI 317

Query: 336 XXXXXXXXXXXXXXXXLAFDLFMEMER-LHLEPDDITFIAVLNACGHAGLVKEGVVCFEI 160
                            +  +F +M R   L PD  + +  L+A    G + EG+     
Sbjct: 318 SCNAIMAGYVKNSHYLESLKVFHDMLRESSLAPDSTSLLIALSAVAELGYIDEGIALHCY 377

Query: 159 MRRLHKMVPKLQHYGCMVDILGRAGHVEAA 70
           +   H  +   +    ++D+  + G V++A
Sbjct: 378 VEE-HGFLVAGKLGVALIDMYAKCGSVDSA 406


>dbj|BAQ55936.1| pentatricopeptide repeat protein [Nicotiana tomentosiformis]
          Length = 626

 Score =  449 bits (1156), Expect = e-123
 Identities = 221/339 (65%), Positives = 264/339 (77%), Gaps = 5/339 (1%)
 Frame = -3

Query: 1002 MIDGYVKCGMVSSAQELFDLMPLEMKNLITWNTLISGYVKLENGFEVASDLFEKMPERDL 823
            MIDGYVKCGM+  A  LFD MP+EM+N ++WN +++GYVKL+ GF+VA +LF+KMP+RDL
Sbjct: 195  MIDGYVKCGMLDVACCLFDFMPVEMRNFVSWNAMLTGYVKLDKGFDVAWELFDKMPQRDL 254

Query: 822  ISWNLMIDCCVKNGKLEMASLLFDKMPERDVISWATMVDGYAKIGNVDVARGFFDAMPQR 643
            +SWNLM+ CCVK+G +E A+ LF  MP++DV+SWA MVDGYAK GN+DVAR FFD MP+R
Sbjct: 255  VSWNLMLCCCVKSGNVEKATSLFKVMPKKDVVSWAIMVDGYAKTGNIDVARRFFDDMPER 314

Query: 642  DVISCNALMVGYVKSGRCKEALKVFHDMLSASGFDLAPDSVTLLTALSAIAQLGCIDEGV 463
            DVISCNA+M GYVK+G C EALKVFHDML  S   LAPDS T+L ALSA+A+LG IDEG+
Sbjct: 315  DVISCNAIMAGYVKNGYCLEALKVFHDMLRES--SLAPDSTTVLIALSAVAELGYIDEGI 372

Query: 462  SIHRYMEDHGFLVSGKIGVALIDMYAKCGSIK-----XXXXXXXXXXXXXXXXXXXXXXX 298
            ++H Y+E++GFLV+G++GVALIDMYAKCGS+                             
Sbjct: 373  ALHCYIEENGFLVAGRLGVALIDMYAKCGSVDSAIGVFDDIQERTVDHWNAMIGGLAIHG 432

Query: 297  XXXLAFDLFMEMERLHLEPDDITFIAVLNACGHAGLVKEGVVCFEIMRRLHKMVPKLQHY 118
               LAF LFMEMERL LE DDITFIAVLNACGH+GLVKEG++CFEIMRR H M PKLQHY
Sbjct: 433  FGDLAFQLFMEMERLSLEIDDITFIAVLNACGHSGLVKEGMICFEIMRRAHHMEPKLQHY 492

Query: 117  GCMVDILGRAGHVEAATRFVKEMPIEPNDVVWRTLLSAC 1
            GCMVDIL RAG VE A +FV EMPI PNDVVWRTLLS+C
Sbjct: 493  GCMVDILSRAGQVEEAIKFVNEMPIYPNDVVWRTLLSSC 531



 Score = 73.6 bits (179), Expect = 2e-10
 Identities = 64/226 (28%), Positives = 98/226 (43%), Gaps = 8/226 (3%)
 Frame = -3

Query: 828 DLISWNLMIDCCVKNGKLEMASLLFDKMPERDVISWATMVDGYAKIGNVDVARGFFDAMP 649
           D+   N +I   V+ G +E   L+FD+M  RD +S+ TM+DGY K G +DVA   FD MP
Sbjct: 157 DVFLQNCLISMYVRGGCVEYGHLVFDRMFIRDSVSYNTMIDGYVKCGMLDVACCLFDFMP 216

Query: 648 --QRDVISCNALMVGYVKSGRCKEALKVFHDMLSASGFDLAPDSVTLLTALSAIAQLGCI 475
              R+ +S NA++ GYVK  +  +      D +         D V+    L    + G +
Sbjct: 217 VEMRNFVSWNAMLTGYVKLDKGFDVAWELFDKMPQR------DLVSWNLMLCCCVKSGNV 270

Query: 474 DEGVSIHRYMEDHGFLVSGKIGVALIDMYAKCGSIK-----XXXXXXXXXXXXXXXXXXX 310
           ++  S+ + M     +VS  I   ++D YAK G+I                         
Sbjct: 271 EKATSLFKVMPKKD-VVSWAI---MVDGYAKTGNIDVARRFFDDMPERDVISCNAIMAGY 326

Query: 309 XXXXXXXLAFDLFMEMER-LHLEPDDITFIAVLNACGHAGLVKEGV 175
                   A  +F +M R   L PD  T +  L+A    G + EG+
Sbjct: 327 VKNGYCLEALKVFHDMLRESSLAPDSTTVLIALSAVAELGYIDEGI 372


>ref|XP_009629430.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
            chloroplastic [Nicotiana tomentosiformis]
          Length = 626

 Score =  449 bits (1156), Expect = e-123
 Identities = 221/339 (65%), Positives = 264/339 (77%), Gaps = 5/339 (1%)
 Frame = -3

Query: 1002 MIDGYVKCGMVSSAQELFDLMPLEMKNLITWNTLISGYVKLENGFEVASDLFEKMPERDL 823
            MIDGYVKCGM+  A  LFD MP+EM+N ++WN +++GYVKL+ GF+VA +LF+KMP+RDL
Sbjct: 195  MIDGYVKCGMLDVACCLFDFMPVEMRNFVSWNAMLTGYVKLDKGFDVAWELFDKMPQRDL 254

Query: 822  ISWNLMIDCCVKNGKLEMASLLFDKMPERDVISWATMVDGYAKIGNVDVARGFFDAMPQR 643
            +SWNLM+ CCVK+G +E A+ LF  MP++DV+SWA MVDGYAK GN+DVAR FFD MP+R
Sbjct: 255  VSWNLMLCCCVKSGNVEKATSLFKVMPKKDVVSWAIMVDGYAKTGNIDVARRFFDDMPER 314

Query: 642  DVISCNALMVGYVKSGRCKEALKVFHDMLSASGFDLAPDSVTLLTALSAIAQLGCIDEGV 463
            DVISCNA+M GYVK+G C EALKVFHDML  S   LAPDS T+L ALSA+A+LG IDEG+
Sbjct: 315  DVISCNAIMAGYVKNGYCLEALKVFHDMLRES--SLAPDSTTVLIALSAVAELGYIDEGI 372

Query: 462  SIHRYMEDHGFLVSGKIGVALIDMYAKCGSIK-----XXXXXXXXXXXXXXXXXXXXXXX 298
            ++H Y+E++GFLV+G++GVALIDMYAKCGS+                             
Sbjct: 373  ALHCYIEENGFLVAGRLGVALIDMYAKCGSVDSAIGVFDDIQERTVDHWNAMIGGLAIHG 432

Query: 297  XXXLAFDLFMEMERLHLEPDDITFIAVLNACGHAGLVKEGVVCFEIMRRLHKMVPKLQHY 118
               LAF LFMEMERL LE DDITFIAVLNACGH+GLVKEG++CFEIMRR H M PKLQHY
Sbjct: 433  FGDLAFQLFMEMERLSLEIDDITFIAVLNACGHSGLVKEGMICFEIMRRAHHMEPKLQHY 492

Query: 117  GCMVDILGRAGHVEAATRFVKEMPIEPNDVVWRTLLSAC 1
            GCMVDIL RAG VE A +FV EMPI PNDVVWRTLLS+C
Sbjct: 493  GCMVDILSRAGQVEEAIKFVNEMPIYPNDVVWRTLLSSC 531



 Score = 72.4 bits (176), Expect = 5e-10
 Identities = 64/226 (28%), Positives = 98/226 (43%), Gaps = 8/226 (3%)
 Frame = -3

Query: 828 DLISWNLMIDCCVKNGKLEMASLLFDKMPERDVISWATMVDGYAKIGNVDVARGFFDAMP 649
           D+   N +I   V+ G +E   L+FD+M  RD +S+ TM+DGY K G +DVA   FD MP
Sbjct: 157 DVFLQNCLISMYVRCGCVEYGHLVFDRMFIRDSVSYNTMIDGYVKCGMLDVACCLFDFMP 216

Query: 648 --QRDVISCNALMVGYVKSGRCKEALKVFHDMLSASGFDLAPDSVTLLTALSAIAQLGCI 475
              R+ +S NA++ GYVK  +  +      D +         D V+    L    + G +
Sbjct: 217 VEMRNFVSWNAMLTGYVKLDKGFDVAWELFDKMPQR------DLVSWNLMLCCCVKSGNV 270

Query: 474 DEGVSIHRYMEDHGFLVSGKIGVALIDMYAKCGSIK-----XXXXXXXXXXXXXXXXXXX 310
           ++  S+ + M     +VS  I   ++D YAK G+I                         
Sbjct: 271 EKATSLFKVMPKKD-VVSWAI---MVDGYAKTGNIDVARRFFDDMPERDVISCNAIMAGY 326

Query: 309 XXXXXXXLAFDLFMEMER-LHLEPDDITFIAVLNACGHAGLVKEGV 175
                   A  +F +M R   L PD  T +  L+A    G + EG+
Sbjct: 327 VKNGYCLEALKVFHDMLRESSLAPDSTTVLIALSAVAELGYIDEGI 372


>ref|XP_004229808.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
            chloroplastic [Solanum lycopersicum]
          Length = 625

 Score =  447 bits (1151), Expect = e-123
 Identities = 217/339 (64%), Positives = 264/339 (77%), Gaps = 5/339 (1%)
 Frame = -3

Query: 1002 MIDGYVKCGMVSSAQELFDLMPLEMKNLITWNTLISGYVKLENGFEVASDLFEKMPERDL 823
            +IDGYVKCGM+  A  LFD MP+EM+NL++WN L++GYVKL+ GF+VA +LF++MP+RDL
Sbjct: 194  IIDGYVKCGMLDVACRLFDFMPIEMRNLVSWNALLTGYVKLDQGFDVAWELFDRMPQRDL 253

Query: 822  ISWNLMIDCCVKNGKLEMASLLFDKMPERDVISWATMVDGYAKIGNVDVARGFFDAMPQR 643
            +SWNLM+ CCVK+G  E A+ LFD +P++DV+SWA MVDGYAKIG +D+AR +FD MP R
Sbjct: 254  VSWNLMLYCCVKSGNAEKATALFDMIPKKDVVSWAIMVDGYAKIGKIDIARRYFDDMPVR 313

Query: 642  DVISCNALMVGYVKSGRCKEALKVFHDMLSASGFDLAPDSVTLLTALSAIAQLGCIDEGV 463
            DVISCNA+M GYVK+G C EALKVFHDMLS S    APDS T L ALSA+++LG IDEG+
Sbjct: 314  DVISCNAIMAGYVKNGHCLEALKVFHDMLSDS--SPAPDSTTALLALSAVSELGYIDEGI 371

Query: 462  SIHRYMEDHGFLVSGKIGVALIDMYAKCGSIK-----XXXXXXXXXXXXXXXXXXXXXXX 298
            ++H Y+E++GF V+GK+GVALIDMYAKCGS+                             
Sbjct: 372  ALHCYIEENGFPVAGKLGVALIDMYAKCGSVDSAMGVFNDIQEKNVDHWNAMIGGLAIHG 431

Query: 297  XXXLAFDLFMEMERLHLEPDDITFIAVLNACGHAGLVKEGVVCFEIMRRLHKMVPKLQHY 118
               LAF+LFMEMERL L+ DDITFIAVLNACGH+GLVKEG++CFEIMRR H M PKLQHY
Sbjct: 432  FGDLAFELFMEMERLSLDIDDITFIAVLNACGHSGLVKEGMICFEIMRRAHHMEPKLQHY 491

Query: 117  GCMVDILGRAGHVEAATRFVKEMPIEPNDVVWRTLLSAC 1
            GCMVD+L RAGHVE A +FV EMPI PNDVVWRTLLS+C
Sbjct: 492  GCMVDVLSRAGHVEEAIKFVDEMPIHPNDVVWRTLLSSC 530



 Score = 64.3 bits (155), Expect = 1e-07
 Identities = 34/78 (43%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
 Frame = -3

Query: 828 DLISWNLMIDCCVKNGKLEMASLLFDKMPERDVISWATMVDGYAKIGNVDVARGFFDAMP 649
           D+   N +I   V+ G +E    +FD+M  RD +S+ T++DGY K G +DVA   FD MP
Sbjct: 156 DVFLQNCLISMYVRCGFVEYGHRVFDRMCMRDSVSYNTIIDGYVKCGMLDVACRLFDFMP 215

Query: 648 --QRDVISCNALMVGYVK 601
              R+++S NAL+ GYVK
Sbjct: 216 IEMRNLVSWNALLTGYVK 233


>ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
            chloroplastic [Vitis vinifera]
            gi|731421186|ref|XP_010661651.1| PREDICTED:
            pentatricopeptide repeat-containing protein At2g45350,
            chloroplastic [Vitis vinifera]
            gi|731421189|ref|XP_010661652.1| PREDICTED:
            pentatricopeptide repeat-containing protein At2g45350,
            chloroplastic [Vitis vinifera]
            gi|731421191|ref|XP_010661653.1| PREDICTED:
            pentatricopeptide repeat-containing protein At2g45350,
            chloroplastic [Vitis vinifera]
          Length = 635

 Score =  443 bits (1139), Expect = e-121
 Identities = 220/339 (64%), Positives = 263/339 (77%), Gaps = 5/339 (1%)
 Frame = -3

Query: 1002 MIDGYVKCGMVSSAQELFDLMPLEMKNLITWNTLISGYVKLENGFEVASDLFEKMPERDL 823
            MIDGYVK GMV SA+ELFD+MP+E KNLI+WN++ISGY + E G  VA +LFE+MP+RDL
Sbjct: 194  MIDGYVKHGMVKSARELFDVMPMEQKNLISWNSMISGYARSEEGLRVAWELFEEMPKRDL 253

Query: 822  ISWNLMIDCCVKNGKLEMASLLFDKMPERDVISWATMVDGYAKIGNVDVARGFFDAMPQR 643
            ISWN MID CVK GK+E A  LF++MP+RDV+SWA MVDGYAK+G +D+ARG FD MP+R
Sbjct: 254  ISWNSMIDGCVKCGKMENAHHLFNQMPKRDVVSWANMVDGYAKLGEIDIARGLFDEMPER 313

Query: 642  DVISCNALMVGYVKSGRCKEALKVFHDMLSASGFDLAPDSVTLLTALSAIAQLGCIDEGV 463
            DVISCNA+M GYV++G   EAL  FHDMLS    +L PD+ TLL  LSAIAQLG  DEGV
Sbjct: 314  DVISCNAMMAGYVQNGHLMEALNFFHDMLSRK--ELFPDNATLLITLSAIAQLGHFDEGV 371

Query: 462  SIHRYMEDHGFLVSGKIGVALIDMYAKCGSIK-----XXXXXXXXXXXXXXXXXXXXXXX 298
            ++H Y+ED+GF +S K+GVALIDMYAKCGSI                             
Sbjct: 372  ALHCYIEDNGFSLSEKLGVALIDMYAKCGSIDNALSVFEDIDDKSIDHWNAIIGGLAIHG 431

Query: 297  XXXLAFDLFMEMERLHLEPDDITFIAVLNACGHAGLVKEGVVCFEIMRRLHKMVPKLQHY 118
               +AF+LFMEME+L ++PDDITFI VLNAC HAGLVKEG++CFE+MRR+HK+ PKLQHY
Sbjct: 432  LGEVAFELFMEMEKLFVKPDDITFIGVLNACNHAGLVKEGLMCFELMRRVHKVEPKLQHY 491

Query: 117  GCMVDILGRAGHVEAATRFVKEMPIEPNDVVWRTLLSAC 1
            GCMVDILGRAGHVE A +FV++MPIEPNDVVWRTLLSAC
Sbjct: 492  GCMVDILGRAGHVEEAKKFVEKMPIEPNDVVWRTLLSAC 530



 Score = 64.7 bits (156), Expect = 1e-07
 Identities = 74/319 (23%), Positives = 128/319 (40%), Gaps = 43/319 (13%)
 Frame = -3

Query: 828  DLISWNLMIDCCVKNGKLEMASLLFDKMPERDVISWATMVDGYAKIGNVDVARGFFDAMP 649
            D+   N ++   ++ G L +A  LFD+M +RD +S+ +M+DGY K G V  AR  FD MP
Sbjct: 156  DVFLQNCLMCLYLRCGCLGIARQLFDRMMKRDSVSFNSMIDGYVKHGMVKSARELFDVMP 215

Query: 648  --QRDVISCNALMVGYVKSGRCKEALKVFHDMLSASGFDLAP--DSVTLLTALSAIAQLG 481
              Q+++IS N+++ GY +S   +E L+V  ++     F+  P  D ++  + +    + G
Sbjct: 216  MEQKNLISWNSMISGYARS---EEGLRVAWEL-----FEEMPKRDLISWNSMIDGCVKCG 267

Query: 480  CIDEGVSIHRYMEDHGFLVSGKIGVALIDMYAKCGSIK-----XXXXXXXXXXXXXXXXX 316
             ++    +   M     +        ++D YAK G I                       
Sbjct: 268  KMENAHHLFNQMPKRDVVSWAN----MVDGYAKLGEIDIARGLFDEMPERDVISCNAMMA 323

Query: 315  XXXXXXXXXLAFDLFMEM-ERLHLEPDDITFIAVLNACGHAGLVKEGVVC--------FE 163
                      A + F +M  R  L PD+ T +  L+A    G   EGV          F 
Sbjct: 324  GYVQNGHLMEALNFFHDMLSRKELFPDNATLLITLSAIAQLGHFDEGVALHCYIEDNGFS 383

Query: 162  IMRRLHKMV----------------------PKLQHYGCMVDILGRAGHVEAATRFVKEM 49
            +  +L   +                        + H+  ++  L   G  E A     EM
Sbjct: 384  LSEKLGVALIDMYAKCGSIDNALSVFEDIDDKSIDHWNAIIGGLAIHGLGEVAFELFMEM 443

Query: 48   P---IEPNDVVWRTLLSAC 1
                ++P+D+ +  +L+AC
Sbjct: 444  EKLFVKPDDITFIGVLNAC 462


>emb|CDO97694.1| unnamed protein product [Coffea canephora]
          Length = 619

 Score =  432 bits (1110), Expect = e-118
 Identities = 211/339 (62%), Positives = 257/339 (75%), Gaps = 5/339 (1%)
 Frame = -3

Query: 1002 MIDGYVKCGMVSSAQELFDLMPLEMKNLITWNTLISGYVKLENGFEVASDLFEKMPERDL 823
            MIDGYVKCGMV  A++LF  +P  M+NLITWNT+I G+VKL +GFE A +LFEKMPERD+
Sbjct: 191  MIDGYVKCGMVDFARQLFHSLPAGMRNLITWNTMIGGFVKLGDGFESAWELFEKMPERDV 250

Query: 822  ISWNLMIDCCVKNGKLEMASLLFDKMPERDVISWATMVDGYAKIGNVDVARGFFDAMPQR 643
            +SWN+MIDCC+K+GK+ MA +LFD MP RDV SWA M+DGYAK G+VDVARGFFD MP R
Sbjct: 251  VSWNMMIDCCIKSGKMRMAQMLFDTMPRRDVASWAIMIDGYAKSGSVDVARGFFDDMPVR 310

Query: 642  DVISCNALMVGYVKSGRCKEALKVFHDMLSASGFDLAPDSVTLLTALSAIAQLGCIDEGV 463
            DVISCNA+M GY+++G   EALK++HD+L+ S F+  PD  T L ALSA A LG I+EGV
Sbjct: 311  DVISCNAMMAGYLRNGSYVEALKMYHDVLNNSDFE--PDKTTFLIALSAAAHLGNINEGV 368

Query: 462  SIHRYMEDHGFLVSGKIGVALIDMYAKCGSIK-----XXXXXXXXXXXXXXXXXXXXXXX 298
            +IH +M+++G   +GK+GVALIDMYAKCG I                             
Sbjct: 369  TIHSHMKNNGLFAAGKLGVALIDMYAKCGDIDCALSVFEDIKEKSVDHWNAMIGGLAING 428

Query: 297  XXXLAFDLFMEMERLHLEPDDITFIAVLNACGHAGLVKEGVVCFEIMRRLHKMVPKLQHY 118
               LAFD+FMEMER  +EPDDITFIA+LNACGHAG++KEG++CFEI+RR+H M PKLQHY
Sbjct: 429  LGELAFDMFMEMERRCIEPDDITFIALLNACGHAGMLKEGIICFEILRRVHNMDPKLQHY 488

Query: 117  GCMVDILGRAGHVEAATRFVKEMPIEPNDVVWRTLLSAC 1
            GC+VDIL RAGH+E A  FVKEMPIEPN V+ RTLL AC
Sbjct: 489  GCIVDILSRAGHIEEARTFVKEMPIEPNTVILRTLLGAC 527



 Score = 72.0 bits (175), Expect = 6e-10
 Identities = 84/340 (24%), Positives = 131/340 (38%), Gaps = 46/340 (13%)
 Frame = -3

Query: 882  LENGFEVASDLFEKMPERDLISWNLMIDCCVKNGKLEMASLLFDKMPERDVISWATMVDG 703
            ++NG ++   L +     DL   N +I   VK G +E     FD+M ++D +S+ +M+DG
Sbjct: 135  VKNGMQIHGLLKKCEFGSDLFLGNCLISMYVKCGCIEYGRQFFDRMADKDSVSYNSMIDG 194

Query: 702  YAKIGNVDVARGFFDAMP--QRDVISCNALMVGYVKSGRCKEALKVFHDMLSASGFDLAP 529
            Y K G VD AR  F ++P   R++I+ N ++ G+VK G                GF+ A 
Sbjct: 195  YVKCGMVDFARQLFHSLPAGMRNLITWNTMIGGFVKLG---------------DGFESAW 239

Query: 528  DSVTLLTALSAIAQLGCIDEGVSIHRY-MEDHGFLVSGKIGVA----LIDMYAKCGSIK- 367
            +    +     ++    ID  +   +  M    F    +  VA    +ID YAK GS+  
Sbjct: 240  ELFEKMPERDVVSWNMMIDCCIKSGKMRMAQMLFDTMPRRDVASWAIMIDGYAKSGSVDV 299

Query: 366  ----XXXXXXXXXXXXXXXXXXXXXXXXXXLAFDLFME-MERLHLEPDDITFIAVLNACG 202
                                           A  ++ + +     EPD  TF+  L+A  
Sbjct: 300  ARGFFDDMPVRDVISCNAMMAGYLRNGSYVEALKMYHDVLNNSDFEPDKTTFLIALSAAA 359

Query: 201  HAGLVKEGVVCFEIMRR------------LHKMVPK------------------LQHYGC 112
            H G + EGV     M+             L  M  K                  + H+  
Sbjct: 360  HLGNINEGVTIHSHMKNNGLFAAGKLGVALIDMYAKCGDIDCALSVFEDIKEKSVDHWNA 419

Query: 111  MVDILGRAGHVEAATRFVKEMP---IEPNDVVWRTLLSAC 1
            M+  L   G  E A     EM    IEP+D+ +  LL+AC
Sbjct: 420  MIGGLAINGLGELAFDMFMEMERRCIEPDDITFIALLNAC 459


>emb|CAN72187.1| hypothetical protein VITISV_012899 [Vitis vinifera]
          Length = 690

 Score =  427 bits (1099), Expect = e-117
 Identities = 214/334 (64%), Positives = 256/334 (76%)
 Frame = -3

Query: 1002 MIDGYVKCGMVSSAQELFDLMPLEMKNLITWNTLISGYVKLENGFEVASDLFEKMPERDL 823
            MIDGYVK GMV SA+ELFD+MP+E KNLI+WN++ISGY + E G  VA +LFE+MP+RDL
Sbjct: 250  MIDGYVKHGMVKSARELFDVMPMEQKNLISWNSMISGYARSEEGLRVAWELFEEMPKRDL 309

Query: 822  ISWNLMIDCCVKNGKLEMASLLFDKMPERDVISWATMVDGYAKIGNVDVARGFFDAMPQR 643
            ISWN MID CVK GK+E A  LF+ MP+RDV+SWA MVDGYAK+G +D+ARG FD MP+R
Sbjct: 310  ISWNSMIDGCVKCGKMENAHHLFNXMPKRDVVSWANMVDGYAKLGEIDIARGLFDEMPER 369

Query: 642  DVISCNALMVGYVKSGRCKEALKVFHDMLSASGFDLAPDSVTLLTALSAIAQLGCIDEGV 463
            DVISCNA+M GYV++G   EAL  FHDMLS    +L P + TLL  LSAIAQLG  DEGV
Sbjct: 370  DVISCNAMMAGYVQNGXLMEALXFFHDMLSXK--ELFPXNATLLITLSAIAQLGHFDEGV 427

Query: 462  SIHRYMEDHGFLVSGKIGVALIDMYAKCGSIKXXXXXXXXXXXXXXXXXXXXXXXXXXLA 283
            ++H Y+ED+GF +S K+G ALIDMYAKCGSI                            A
Sbjct: 428  ALHCYIEDNGFSLSEKLGXALIDMYAKCGSIDNALIDHWNAIJXGLAIHGLGEV-----A 482

Query: 282  FDLFMEMERLHLEPDDITFIAVLNACGHAGLVKEGVVCFEIMRRLHKMVPKLQHYGCMVD 103
            F+LFMEME+L ++P+DITFI VLNAC HAGLVKEG++ F +MR +HK+ PKLQHYGCMVD
Sbjct: 483  FELFMEMEKLFVKPBDITFIGVLNACNHAGLVKEGLMXFXLMRXVHKVEPKLQHYGCMVD 542

Query: 102  ILGRAGHVEAATRFVKEMPIEPNDVVWRTLLSAC 1
            ILGRAGHVE   +FV++MPIEPNDVVWRTLLSAC
Sbjct: 543  ILGRAGHVEEXKKFVEKMPIEPNDVVWRTLLSAC 576



 Score = 62.8 bits (151), Expect = 4e-07
 Identities = 75/309 (24%), Positives = 127/309 (41%), Gaps = 33/309 (10%)
 Frame = -3

Query: 828  DLISWNLMIDCCVKNGKLEMASLLFDKMPERDVISWATMVDGYAKIGNVDVARGFFDAMP 649
            D+   N ++   ++ G L +A  LFD+M  RD +S+ +M+DGY K G V  AR  FD MP
Sbjct: 212  DVFLQNCLMCLYLRCGCLGIARQLFDRMMXRDSVSFNSMIDGYVKHGMVKSARELFDVMP 271

Query: 648  --QRDVISCNALMVGYVKSGRCKEALKVFHDMLSASGFDLAP--DSVTLLTALSAIAQLG 481
              Q+++IS N+++ GY +S   +E L+V  ++     F+  P  D ++  + +    + G
Sbjct: 272  MEQKNLISWNSMISGYARS---EEGLRVAWEL-----FEEMPKRDLISWNSMIDGCVKCG 323

Query: 480  CIDEGVSIHRYMEDHGFLVSGKIGVALIDMYAKCGSIK-----XXXXXXXXXXXXXXXXX 316
             ++    +   M     +        ++D YAK G I                       
Sbjct: 324  KMENAHHLFNXMPKRDVVSWAN----MVDGYAKLGEIDIARGLFDEMPERDVISCNAMMA 379

Query: 315  XXXXXXXXXLAFDLFMEM-ERLHLEPDDITFIAVLNACGHAGLVKEGVV--CF------- 166
                      A   F +M     L P + T +  L+A    G   EGV   C+       
Sbjct: 380  GYVQNGXLMEALXFFHDMLSXKELFPXNATLLITLSAIAQLGHFDEGVALHCYIEDNGFS 439

Query: 165  ---EIMRRLHKMVPK--------LQHYGCMVDILGRAGHVEAATRFVKEMP---IEPNDV 28
               ++   L  M  K        + H+  ++  L   G  E A     EM    ++P+D+
Sbjct: 440  LSEKLGXALIDMYAKCGSIDNALIDHWNAIJXGLAIHGLGEVAFELFMEMEKLFVKPBDI 499

Query: 27   VWRTLLSAC 1
             +  +L+AC
Sbjct: 500  TFIGVLNAC 508


>gb|AKH05179.1| chlororespiratory reduction 4 [Francoa sonchifolia]
          Length = 638

 Score =  416 bits (1070), Expect = e-113
 Identities = 201/339 (59%), Positives = 261/339 (76%), Gaps = 5/339 (1%)
 Frame = -3

Query: 1002 MIDGYVKCGMVSSAQELFDLMPLEMKNLITWNTLISGYVKLENGFEVASDLFEKMPERDL 823
            MIDGYVKCG + SA+ LFD MP + KNLI+WN++ISGY +LE+GF+ A +LF+ MPE+D 
Sbjct: 195  MIDGYVKCGEIDSARLLFDYMPEKEKNLISWNSVISGYARLEDGFKTAWELFDTMPEKDS 254

Query: 822  ISWNLMIDCCVKNGKLEMASLLFDKMPERDVISWATMVDGYAKIGNVDVARGFFDAMPQR 643
             SWN +ID CVK GK++ A  LF++MPERDVI+WA M+DG+ K+GNVD+AR  FD MP+R
Sbjct: 255  ASWNSLIDGCVKRGKMDDAHDLFNRMPERDVITWANMIDGFVKLGNVDIARELFDQMPER 314

Query: 642  DVISCNALMVGYVKSGRCKEALKVFHDMLSASGFDLAPDSVTLLTALSAIAQLGCIDEGV 463
            DVI+CNA+M GYV++G C+EAL++FH+M + +   L+PD+VTLL  LSA AQLG  DEGV
Sbjct: 315  DVIACNAMMAGYVQNGYCREALEIFHNMQTLN--CLSPDNVTLLIVLSAAAQLGQFDEGV 372

Query: 462  SIHRYMEDHGFLVSGKIGVALIDMYAKCGSIK-----XXXXXXXXXXXXXXXXXXXXXXX 298
            + H Y++++ F +SGK+GVALIDMY+KCG I+                            
Sbjct: 373  AAHSYIKENRFTLSGKLGVALIDMYSKCGDIENAMLVFENIEKKEVDHWNAIIGGLAIHG 432

Query: 297  XXXLAFDLFMEMERLHLEPDDITFIAVLNACGHAGLVKEGVVCFEIMRRLHKMVPKLQHY 118
               +AF+LFMEME+L ++PDDITFI+VLNACGHAGLVKEGV+CFEI+RR+HK+ PKLQHY
Sbjct: 433  SGEMAFELFMEMEKLCVKPDDITFISVLNACGHAGLVKEGVMCFEILRRVHKLEPKLQHY 492

Query: 117  GCMVDILGRAGHVEAATRFVKEMPIEPNDVVWRTLLSAC 1
            GC+VDILGRAG ++ A  F++ MPIEPNDV+WRTLLSAC
Sbjct: 493  GCVVDILGRAGLIDKACEFIEGMPIEPNDVIWRTLLSAC 531



 Score = 84.3 bits (207), Expect = 1e-13
 Identities = 79/337 (23%), Positives = 142/337 (42%), Gaps = 43/337 (12%)
 Frame = -3

Query: 882  LENGFEVASDLFEKMPERDLISWNLMIDCCVKNGKLEMASLLFDKMPERDVISWATMVDG 703
            ++ G ++   L +   +RD+   N +I   ++ G +E A  +FDKMP RD +S+ +M+DG
Sbjct: 139  VKEGMQIHGLLRKMEFDRDVFLQNSLIGLYLRCGCVEFARQVFDKMPVRDSVSYNSMIDG 198

Query: 702  YAKIGNVDVARGFFDAMPQRD--VISCNALMVGYVKSGRCKEALKVFHDMLSASGFDLAP 529
            Y K G +D AR  FD MP+++  +IS N+++ GY    R ++  K   ++     FD  P
Sbjct: 199  YVKCGEIDSARLLFDYMPEKEKNLISWNSVISGY---ARLEDGFKTAWEL-----FDTMP 250

Query: 528  --DSVTLLTALSAIAQLGCIDEGVSIHRYMEDHGFLVSGKIGVALIDMYAKCGSIK---- 367
              DS +  + +    + G +D+   +   M +   +        +ID + K G++     
Sbjct: 251  EKDSASWNSLIDGCVKRGKMDDAHDLFNRMPERDVITWAN----MIDGFVKLGNVDIARE 306

Query: 366  -XXXXXXXXXXXXXXXXXXXXXXXXXXLAFDLFMEMERLH-LEPDDITFIAVLNACGHAG 193
                                        A ++F  M+ L+ L PD++T + VL+A    G
Sbjct: 307  LFDQMPERDVIACNAMMAGYVQNGYCREALEIFHNMQTLNCLSPDNVTLLIVLSAAAQLG 366

Query: 192  LVKEGVVCFEIMRR------------LHKMVPK------------------LQHYGCMVD 103
               EGV     ++             L  M  K                  + H+  ++ 
Sbjct: 367  QFDEGVAAHSYIKENRFTLSGKLGVALIDMYSKCGDIENAMLVFENIEKKEVDHWNAIIG 426

Query: 102  ILGRAGHVEAATRFVKEMP---IEPNDVVWRTLLSAC 1
             L   G  E A     EM    ++P+D+ + ++L+AC
Sbjct: 427  GLAIHGSGEMAFELFMEMEKLCVKPDDITFISVLNAC 463


>ref|XP_002320719.2| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|550323642|gb|EEE99034.2|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 643

 Score =  410 bits (1054), Expect = e-112
 Identities = 205/339 (60%), Positives = 252/339 (74%), Gaps = 5/339 (1%)
 Frame = -3

Query: 1002 MIDGYVKCGMVSSAQELFDLMPLEMKNLITWNTLISGYVKLENGFEVASDLFEKMPERDL 823
            MIDGYVK G +  A+ +FD +PLE +NLI+WN+LI GY + E+G  VA  LF KMPERDL
Sbjct: 199  MIDGYVKGGRIDLARVVFDCIPLEERNLISWNSLIRGYAQSEDGILVAWQLFAKMPERDL 258

Query: 822  ISWNLMIDCCVKNGKLEMASLLFDKMPERDVISWATMVDGYAKIGNVDVARGFFDAMPQR 643
            ISWN MID CVK G++E A  LFD+MP RD++SWA M+DGYAK G VD+AR  FD MP+R
Sbjct: 259  ISWNSMIDGCVKCGRMEDAQGLFDRMPNRDIVSWANMIDGYAKNGRVDIARSLFDEMPER 318

Query: 642  DVISCNALMVGYVKSGRCKEALKVFHDMLSASGFDLAPDSVTLLTALSAIAQLGCIDEGV 463
            DV++ NA+M GYV++G C EAL +F+ M S   F L  D+ TLL ALSAIAQLG ID+GV
Sbjct: 319  DVVAYNAMMGGYVQNGYCMEALGIFYGMQSDGNFLL--DNATLLIALSAIAQLGHIDKGV 376

Query: 462  SIHRYMEDHGFLVSGKIGVALIDMYAKCGSIK-----XXXXXXXXXXXXXXXXXXXXXXX 298
            +IHR++E+ GF + G++GVALIDMY+KCGSI+                            
Sbjct: 377  AIHRFIEEIGFSLDGRLGVALIDMYSKCGSIENAMMVFENIKEKSVDHWNAIIGGLAIHG 436

Query: 297  XXXLAFDLFMEMERLHLEPDDITFIAVLNACGHAGLVKEGVVCFEIMRRLHKMVPKLQHY 118
               LAFD  MEMER+ +EPDDITFI +LNACGHAGLVKEG++CFE+MRR+HK+ PKLQHY
Sbjct: 437  LGELAFDFLMEMERMRVEPDDITFIGLLNACGHAGLVKEGMMCFELMRRVHKVEPKLQHY 496

Query: 117  GCMVDILGRAGHVEAATRFVKEMPIEPNDVVWRTLLSAC 1
            GCMVDILGRAGH+E A  FV+EMP EPNDV+WR+LLSAC
Sbjct: 497  GCMVDILGRAGHIEEAKNFVEEMPFEPNDVIWRSLLSAC 535


>ref|XP_011034218.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
            chloroplastic [Populus euphratica]
          Length = 641

 Score =  410 bits (1053), Expect = e-111
 Identities = 203/339 (59%), Positives = 252/339 (74%), Gaps = 5/339 (1%)
 Frame = -3

Query: 1002 MIDGYVKCGMVSSAQELFDLMPLEMKNLITWNTLISGYVKLENGFEVASDLFEKMPERDL 823
            MIDGYVK G +  A+ +FD +PLE +NLI+WN+LI GY + E+G  VA  LFE MPERDL
Sbjct: 197  MIDGYVKGGRIDLARVVFDCIPLEERNLISWNSLIRGYAQSEDGILVAWQLFENMPERDL 256

Query: 822  ISWNLMIDCCVKNGKLEMASLLFDKMPERDVISWATMVDGYAKIGNVDVARGFFDAMPQR 643
            ISWN MID CVK G++E A  LFD+MP RD++SWA M+DGYAK G VD+AR  FD MP+R
Sbjct: 257  ISWNSMIDGCVKCGRMEDAQCLFDRMPNRDIVSWANMIDGYAKNGRVDIARCLFDEMPER 316

Query: 642  DVISCNALMVGYVKSGRCKEALKVFHDMLSASGFDLAPDSVTLLTALSAIAQLGCIDEGV 463
            DV++CNA+M GYV++G C EAL +F+ MLSA    L  D+ TLL ALSAIAQLG ID+GV
Sbjct: 317  DVVACNAMMGGYVQNGYCMEALGIFYGMLSAGNILL--DNATLLIALSAIAQLGHIDKGV 374

Query: 462  SIHRYMEDHGFLVSGKIGVALIDMYAKCGSIK-----XXXXXXXXXXXXXXXXXXXXXXX 298
            +IHR++E+ GF + G++GV LI MY+KCGSI+                            
Sbjct: 375  AIHRFIEEIGFSLDGRLGVGLIYMYSKCGSIENAMMVFENIKGKSVDHWNAIIGGLAIHG 434

Query: 297  XXXLAFDLFMEMERLHLEPDDITFIAVLNACGHAGLVKEGVVCFEIMRRLHKMVPKLQHY 118
               +AFD  MEMER+ +EPDDITFI +LNACGHAGLVKEG++CFE+MRR+HK+ PKLQHY
Sbjct: 435  LGEMAFDFLMEMERMRVEPDDITFIGLLNACGHAGLVKEGMMCFELMRRVHKVEPKLQHY 494

Query: 117  GCMVDILGRAGHVEAATRFVKEMPIEPNDVVWRTLLSAC 1
            GCMVDILGRAG++E A  FV EMP+EPNDV+WR+LLSAC
Sbjct: 495  GCMVDILGRAGYIEEAKNFVGEMPVEPNDVIWRSLLSAC 533



 Score = 68.9 bits (167), Expect = 5e-09
 Identities = 36/79 (45%), Positives = 53/79 (67%), Gaps = 2/79 (2%)
 Frame = -3

Query: 828 DLISWNLMIDCCVKNGKLEMASLLFDKMPERDVISWATMVDGYAKIGNVDVARGFFDAMP 649
           DL   N +I   VK G L  A  +FD+MP+RD +S+ +M+DGY K G +D+AR  FD +P
Sbjct: 159 DLFLQNCLISFYVKCGCLVRARQVFDRMPKRDSVSYNSMIDGYVKGGRIDLARVVFDCIP 218

Query: 648 --QRDVISCNALMVGYVKS 598
             +R++IS N+L+ GY +S
Sbjct: 219 LEERNLISWNSLIRGYAQS 237


>ref|XP_006490914.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
            chloroplastic-like [Citrus sinensis]
            gi|641867125|gb|KDO85809.1| hypothetical protein
            CISIN_1g047120mg [Citrus sinensis]
          Length = 634

 Score =  406 bits (1043), Expect = e-110
 Identities = 198/339 (58%), Positives = 253/339 (74%), Gaps = 5/339 (1%)
 Frame = -3

Query: 1002 MIDGYVKCGMVSSAQELFDLMPLEMKNLITWNTLISGYVKLENGFEVASDLFEKMPERDL 823
            MIDGYVK G + SA+ELFD MP+  +NLI+WN++++GY +L++G + A  +FEKMPERDL
Sbjct: 191  MIDGYVKSGNIESARELFDSMPIRERNLISWNSVLNGYAQLKSGLQFAWQIFEKMPERDL 250

Query: 822  ISWNLMIDCCVKNGKLEMASLLFDKMPERDVISWATMVDGYAKIGNVDVARGFFDAMPQR 643
            ISWN M+  CVK GK++ A  LFDKMP+RDV+SWA M+DGYAK+G VD+AR  FD MP+R
Sbjct: 251  ISWNSMLHGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKLGRVDIARRLFDEMPKR 310

Query: 642  DVISCNALMVGYVKSGRCKEALKVFHDMLSASGFDLAPDSVTLLTALSAIAQLGCIDEGV 463
            DV++CNA+M GYV++G   +AL++F +M       L PD  +L+  LSAIAQLG ID+GV
Sbjct: 311  DVVACNAMMGGYVRNGYSMKALEIFDNM--QCELYLHPDDASLVIVLSAIAQLGHIDKGV 368

Query: 462  SIHRYMEDHGFLVSGKIGVALIDMYAKCGSIK-----XXXXXXXXXXXXXXXXXXXXXXX 298
            +IHRY+E   F ++GK GVALIDMY+KCGSI+                            
Sbjct: 369  AIHRYLEKDQFSLNGKHGVALIDMYSKCGSIENAIKVFEQIEDGSVDHWNAMINGLAIHG 428

Query: 297  XXXLAFDLFMEMERLHLEPDDITFIAVLNACGHAGLVKEGVVCFEIMRRLHKMVPKLQHY 118
               LAFDL MEMERL +EPDDITF  +LNAC HAGLVKEG++CFE+MRR+HK+ P+LQHY
Sbjct: 429  LGELAFDLLMEMERLSIEPDDITFTGLLNACAHAGLVKEGLLCFELMRRIHKLEPELQHY 488

Query: 117  GCMVDILGRAGHVEAATRFVKEMPIEPNDVVWRTLLSAC 1
            GCMVDILGRAGH+EAA   +++MP+EPNDV+WRTLLSAC
Sbjct: 489  GCMVDILGRAGHIEAARNLIEDMPMEPNDVIWRTLLSAC 527



 Score = 88.6 bits (218), Expect = 6e-15
 Identities = 88/340 (25%), Positives = 145/340 (42%), Gaps = 46/340 (13%)
 Frame = -3

Query: 882  LENGFEVASDLFEKMPERDLISWNLMIDCCVKNGKLEMASLLFDKMPERDVISWATMVDG 703
            +E G ++   L +     DL   N +I   V+ G LE A  LFDKM  RD +S+ +M+DG
Sbjct: 135  IEEGLQIHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVSYNSMIDG 194

Query: 702  YAKIGNVDVARGFFDAMP--QRDVISCNALMVGY--VKSGRCKEALKVFHDMLSASGFDL 535
            Y K GN++ AR  FD+MP  +R++IS N+++ GY  +KSG  + A ++F  M        
Sbjct: 195  YVKSGNIESARELFDSMPIRERNLISWNSVLNGYAQLKSG-LQFAWQIFEKMPER----- 248

Query: 534  APDSVTLLTALSAIAQLGCIDEGVSIHRYMEDHGFLVSGKIGVALIDMYAKCGSIK---- 367
              D ++  + L    + G +D+  ++   M     +        +ID YAK G +     
Sbjct: 249  --DLISWNSMLHGCVKCGKMDDAQALFDKMPKRDVVSWAN----MIDGYAKLGRVDIARR 302

Query: 366  -XXXXXXXXXXXXXXXXXXXXXXXXXXLAFDLFMEME-RLHLEPDDITFIAVLNACGHAG 193
                                        A ++F  M+  L+L PDD + + VL+A    G
Sbjct: 303  LFDEMPKRDVVACNAMMGGYVRNGYSMKALEIFDNMQCELYLHPDDASLVIVLSAIAQLG 362

Query: 192  LVKEGVVCFEIMRRLHKMVPKL--QHYGCMVDILGRAGHVEAATRF-------------- 61
             + +GV    I R L K    L  +H   ++D+  + G +E A +               
Sbjct: 363  HIDKGVA---IHRYLEKDQFSLNGKHGVALIDMYSKCGSIENAIKVFEQIEDGSVDHWNA 419

Query: 60   --------------------VKEMPIEPNDVVWRTLLSAC 1
                                ++ + IEP+D+ +  LL+AC
Sbjct: 420  MINGLAIHGLGELAFDLLMEMERLSIEPDDITFTGLLNAC 459


>ref|XP_006445271.1| hypothetical protein CICLE_v10023562mg, partial [Citrus clementina]
            gi|557547533|gb|ESR58511.1| hypothetical protein
            CICLE_v10023562mg, partial [Citrus clementina]
          Length = 658

 Score =  406 bits (1043), Expect = e-110
 Identities = 198/339 (58%), Positives = 253/339 (74%), Gaps = 5/339 (1%)
 Frame = -3

Query: 1002 MIDGYVKCGMVSSAQELFDLMPLEMKNLITWNTLISGYVKLENGFEVASDLFEKMPERDL 823
            MIDGYVK G + SA+ELFD MP+  +NLI+WN++++GY +L++G + A  +FEKMPERDL
Sbjct: 248  MIDGYVKSGNIESARELFDSMPIRERNLISWNSVLNGYAQLKSGLQFAWQIFEKMPERDL 307

Query: 822  ISWNLMIDCCVKNGKLEMASLLFDKMPERDVISWATMVDGYAKIGNVDVARGFFDAMPQR 643
            ISWN M+  CVK GK++ A  LFDKMP+RDV+SWA M+DGYAK+G VD+AR  FD MP+R
Sbjct: 308  ISWNSMLHGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKLGRVDIARRLFDEMPKR 367

Query: 642  DVISCNALMVGYVKSGRCKEALKVFHDMLSASGFDLAPDSVTLLTALSAIAQLGCIDEGV 463
            DV++CNA+M GYV++G   +AL++F +M       L PD  +L+  LSAIAQLG ID+GV
Sbjct: 368  DVVACNAMMGGYVRNGYSMKALEIFDNM--QCELYLHPDDASLVIVLSAIAQLGHIDKGV 425

Query: 462  SIHRYMEDHGFLVSGKIGVALIDMYAKCGSIK-----XXXXXXXXXXXXXXXXXXXXXXX 298
            +IHRY+E   F ++GK GVALIDMY+KCGSI+                            
Sbjct: 426  AIHRYLEKDQFSLNGKHGVALIDMYSKCGSIENAIKVFEQIEDGSVDHWNAMINGLAIHG 485

Query: 297  XXXLAFDLFMEMERLHLEPDDITFIAVLNACGHAGLVKEGVVCFEIMRRLHKMVPKLQHY 118
               LAFDL MEMERL +EPDDITF  +LNAC HAGLVKEG++CFE+MRR+HK+ P+LQHY
Sbjct: 486  LGELAFDLLMEMERLSIEPDDITFTGLLNACAHAGLVKEGLLCFELMRRIHKLEPELQHY 545

Query: 117  GCMVDILGRAGHVEAATRFVKEMPIEPNDVVWRTLLSAC 1
            GCMVDILGRAGH+EAA   +++MP+EPNDV+WRTLLSAC
Sbjct: 546  GCMVDILGRAGHIEAARNLIEDMPMEPNDVIWRTLLSAC 584



 Score = 88.6 bits (218), Expect = 6e-15
 Identities = 88/340 (25%), Positives = 145/340 (42%), Gaps = 46/340 (13%)
 Frame = -3

Query: 882  LENGFEVASDLFEKMPERDLISWNLMIDCCVKNGKLEMASLLFDKMPERDVISWATMVDG 703
            +E G ++   L +     DL   N +I   V+ G LE A  LFDKM  RD +S+ +M+DG
Sbjct: 192  IEEGLQIHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVSYNSMIDG 251

Query: 702  YAKIGNVDVARGFFDAMP--QRDVISCNALMVGY--VKSGRCKEALKVFHDMLSASGFDL 535
            Y K GN++ AR  FD+MP  +R++IS N+++ GY  +KSG  + A ++F  M        
Sbjct: 252  YVKSGNIESARELFDSMPIRERNLISWNSVLNGYAQLKSG-LQFAWQIFEKMPER----- 305

Query: 534  APDSVTLLTALSAIAQLGCIDEGVSIHRYMEDHGFLVSGKIGVALIDMYAKCGSIK---- 367
              D ++  + L    + G +D+  ++   M     +        +ID YAK G +     
Sbjct: 306  --DLISWNSMLHGCVKCGKMDDAQALFDKMPKRDVVSWAN----MIDGYAKLGRVDIARR 359

Query: 366  -XXXXXXXXXXXXXXXXXXXXXXXXXXLAFDLFMEME-RLHLEPDDITFIAVLNACGHAG 193
                                        A ++F  M+  L+L PDD + + VL+A    G
Sbjct: 360  LFDEMPKRDVVACNAMMGGYVRNGYSMKALEIFDNMQCELYLHPDDASLVIVLSAIAQLG 419

Query: 192  LVKEGVVCFEIMRRLHKMVPKL--QHYGCMVDILGRAGHVEAATRF-------------- 61
             + +GV    I R L K    L  +H   ++D+  + G +E A +               
Sbjct: 420  HIDKGVA---IHRYLEKDQFSLNGKHGVALIDMYSKCGSIENAIKVFEQIEDGSVDHWNA 476

Query: 60   --------------------VKEMPIEPNDVVWRTLLSAC 1
                                ++ + IEP+D+ +  LL+AC
Sbjct: 477  MINGLAIHGLGELAFDLLMEMERLSIEPDDITFTGLLNAC 516


>ref|XP_007052071.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
            [Theobroma cacao] gi|508704332|gb|EOX96228.1|
            Pentatricopeptide repeat (PPR) superfamily protein,
            putative [Theobroma cacao]
          Length = 637

 Score =  405 bits (1042), Expect = e-110
 Identities = 197/339 (58%), Positives = 255/339 (75%), Gaps = 5/339 (1%)
 Frame = -3

Query: 1002 MIDGYVKCGMVSSAQELFDLMPLEMKNLITWNTLISGYVKLENGFEVASDLFEKMPERDL 823
            MIDGY+K GM+  A+ELF+ MP+E KNLITWN++ISGY +LE G  +A  LFE+MP+RDL
Sbjct: 194  MIDGYIKTGMIHLARELFEFMPMEDKNLITWNSMISGYAQLEYGMVMALKLFEEMPDRDL 253

Query: 822  ISWNLMIDCCVKNGKLEMASLLFDKMPERDVISWATMVDGYAKIGNVDVARGFFDAMPQR 643
            ISWN MI+  VK G +E A  LF KMP+RDV+SWA M++GYAK+G +D+AR  FD MP+R
Sbjct: 254  ISWNSMINGFVKCGNMEDAQALFVKMPKRDVVSWANMINGYAKVGKIDLARRLFDEMPER 313

Query: 642  DVISCNALMVGYVKSGRCKEALKVFHDMLSASGFDLAPDSVTLLTALSAIAQLGCIDEGV 463
            DV+ CNA+M GYV++G C EAL++F+ +      +L PD+ TLL  LSAIAQLG ID+G+
Sbjct: 314  DVVVCNAMMGGYVQNGYCSEALEIFYHLQRYD--NLQPDNATLLIVLSAIAQLGRIDKGL 371

Query: 462  SIHRYMEDHGFLVSGKIGVALIDMYAKCGSIKXXXXXXXXXXXXXXXXXXXXXXXXXXL- 286
            +IH+Y+E++ F +SG++GVALIDMY+KCGS+K                            
Sbjct: 372  AIHQYLEENKFSLSGRLGVALIDMYSKCGSVKNGMLVFESIEDRSVDHWNAMIGGLAIHG 431

Query: 285  ----AFDLFMEMERLHLEPDDITFIAVLNACGHAGLVKEGVVCFEIMRRLHKMVPKLQHY 118
                AF L +EMERL +EPDDIT+I VLNACGHAGLVKEG++CF+IMRR+HKMVPKL+HY
Sbjct: 432  LGELAFSLLIEMERLSVEPDDITYIGVLNACGHAGLVKEGLICFDIMRRVHKMVPKLKHY 491

Query: 117  GCMVDILGRAGHVEAATRFVKEMPIEPNDVVWRTLLSAC 1
            GC+VDILGRAG +  A +F++EMPIE NDV+WR+LLSAC
Sbjct: 492  GCIVDILGRAGQIAEARKFIEEMPIEANDVIWRSLLSAC 530


>gb|AHB18411.1| pentatricopeptide repeat-containing protein [Gossypium hirsutum]
          Length = 637

 Score =  404 bits (1037), Expect = e-110
 Identities = 196/339 (57%), Positives = 253/339 (74%), Gaps = 5/339 (1%)
 Frame = -3

Query: 1002 MIDGYVKCGMVSSAQELFDLMPLEMKNLITWNTLISGYVKLENGFEVASDLFEKMPERDL 823
            MIDGY+K GM+  A+ELFD+MPLE KNLITWN++ISGY +L++G  +A  LFEKMP+RDL
Sbjct: 194  MIDGYIKRGMIDLAKELFDVMPLENKNLITWNSMISGYTQLKDGMGLALGLFEKMPDRDL 253

Query: 822  ISWNLMIDCCVKNGKLEMASLLFDKMPERDVISWATMVDGYAKIGNVDVARGFFDAMPQR 643
            ISWN MI+  VK G +E A +LFDKMP RDV+SWA M++GYAK+G +D+AR  F+ M +R
Sbjct: 254  ISWNSMINGFVKCGNMEDAQILFDKMPRRDVVSWANMINGYAKVGKIDLARSLFNEMSER 313

Query: 642  DVISCNALMVGYVKSGRCKEALKVFHDMLSASGFDLAPDSVTLLTALSAIAQLGCIDEGV 463
            D++ CNA+M G V++G C EAL++F+ +       L PDS TLL ALSAIAQLG +D G+
Sbjct: 314  DIVVCNAMMAGCVQNGYCGEALEIFYHL--PRNCSLQPDSATLLIALSAIAQLGHVDRGL 371

Query: 462  SIHRYMEDHGFLVSGKIGVALIDMYAKCGSIK-----XXXXXXXXXXXXXXXXXXXXXXX 298
            ++H Y++   F + G++GVALIDMY+KCGSIK                            
Sbjct: 372  ALHHYLKQKKFSLGGRLGVALIDMYSKCGSIKNAVLVFEGIKYKTVDHWNAMIGGLAIHG 431

Query: 297  XXXLAFDLFMEMERLHLEPDDITFIAVLNACGHAGLVKEGVVCFEIMRRLHKMVPKLQHY 118
               LAF L M+ME+L +EPDDIT+I VLNACGHAGLVKEG++CF+IMRR+HKMVPKLQHY
Sbjct: 432  MGELAFKLLMDMEKLCVEPDDITYIGVLNACGHAGLVKEGLICFDIMRRVHKMVPKLQHY 491

Query: 117  GCMVDILGRAGHVEAATRFVKEMPIEPNDVVWRTLLSAC 1
            GC+VDILGRAG ++ A +F++EMPIE NDV+WR+LLSAC
Sbjct: 492  GCVVDILGRAGQIDVARKFIEEMPIEANDVIWRSLLSAC 530



 Score = 72.8 bits (177), Expect = 4e-10
 Identities = 87/397 (21%), Positives = 150/397 (37%), Gaps = 76/397 (19%)
 Frame = -3

Query: 963  AQELFDLMPLEMKNLITWNTLISGYVK--------LENGFEVASDLFEKMPERDLISWNL 808
            AQE F ++ L ++N + ++      V         L+ G +V   L +     DL   N 
Sbjct: 103  AQEAFIILCLMLENGVPFDKFSLSLVLKACSQLGLLKEGMQVHGLLRKLNFGSDLFLQNC 162

Query: 807  MIDCCVKNGKLEMASLLFDKMPERDVISWATMVDGYAKIGNVDVAR-------------- 670
            +I   ++ G +  A  LFD+M  RD +S+ +M+DGY K G +D+A+              
Sbjct: 163  LISYYLRCGFIGYARQLFDRMSMRDSVSYNSMIDGYIKRGMIDLAKELFDVMPLENKNLI 222

Query: 669  --------------------GFFDAMPQRDVISCNALMVGYVKSGRCKEALKVFHDMLSA 550
                                G F+ MP RD+IS N+++ G+VK G  ++A  +F  M   
Sbjct: 223  TWNSMISGYTQLKDGMGLALGLFEKMPDRDLISWNSMINGFVKCGNMEDAQILFDKMPRR 282

Query: 549  SGFDLAPDSVTLLTALSAIAQLGCIDEGVSIHRYMEDHGFLVSGKIGVALIDMYAKCGSI 370
                   D V+    ++  A++G ID   S+   M +   +V   +    +     CG  
Sbjct: 283  -------DVVSWANMINGYAKVGKIDLARSLFNEMSERDIVVCNAMMAGCV-QNGYCGE- 333

Query: 369  KXXXXXXXXXXXXXXXXXXXXXXXXXXLAFDLFMEMER-LHLEPDDITFIAVLNACGHAG 193
                                        A ++F  + R   L+PD  T +  L+A    G
Sbjct: 334  ----------------------------ALEIFYHLPRNCSLQPDSATLLIALSAIAQLG 365

Query: 192  LVKEGVVCFEIMRR------------LHKMVPK------------------LQHYGCMVD 103
             V  G+     +++            L  M  K                  + H+  M+ 
Sbjct: 366  HVDRGLALHHYLKQKKFSLGGRLGVALIDMYSKCGSIKNAVLVFEGIKYKTVDHWNAMIG 425

Query: 102  ILGRAGHVEAATRFVKEMP---IEPNDVVWRTLLSAC 1
             L   G  E A + + +M    +EP+D+ +  +L+AC
Sbjct: 426  GLAIHGMGELAFKLLMDMEKLCVEPDDITYIGVLNAC 462


>gb|AKH05190.1| chlororespiratory reduction 4, partial [Pelargonium australe]
          Length = 592

 Score =  402 bits (1034), Expect = e-109
 Identities = 203/339 (59%), Positives = 251/339 (74%), Gaps = 5/339 (1%)
 Frame = -3

Query: 1002 MIDGYVKCGMVSSAQELFDLMPLEMKNLITWNTLISGYVKLENGFEVASDLFEKMPERDL 823
            MIDGYVKCGM+ SA+ LFD MPLE KNL +WN++I GY + E+G +VA +LF+ MPERDL
Sbjct: 146  MIDGYVKCGMIDSARLLFDRMPLEDKNLNSWNSMIWGYAQSEDGLKVACELFDNMPERDL 205

Query: 822  ISWNLMIDCCVKNGKLEMASLLFDKMPERDVISWATMVDGYAKIGNVDVARGFFDAMPQR 643
            +SWN MID C+K GK+E A  LFD+MP+RDV+SWA+MVDGYAK+G+V++A   F  MP R
Sbjct: 206  VSWNSMIDGCIKCGKIEDARHLFDRMPKRDVVSWASMVDGYAKLGSVEIAAAMFKKMPNR 265

Query: 642  DVISCNALMVGYVKSGRCKEALKVFHDMLSASGFDLAPDSVTLLTALSAIAQLGCIDEGV 463
            DVI+CNA+M GYV++G  KEAL VF  M      +L PD+ TLL  LSAIAQLG +DEG 
Sbjct: 266  DVIACNAMMAGYVQNGFFKEALAVFDYMRGEC--NLKPDATTLLIVLSAIAQLGYLDEGR 323

Query: 462  SIHRYMEDHGFLVSGKIGVALIDMYAKCGSIK-----XXXXXXXXXXXXXXXXXXXXXXX 298
             IH Y+E +   + GK+GVALIDMY+KCGSI+                            
Sbjct: 324  DIHGYIEVNRIYLGGKLGVALIDMYSKCGSIEHAMLVFGNIEEKDVDHWNAMICGLAIHG 383

Query: 297  XXXLAFDLFMEMERLHLEPDDITFIAVLNACGHAGLVKEGVVCFEIMRRLHKMVPKLQHY 118
               LAFDLFMEMER+ + PDDITFI VL+AC HAGLVKEG++CFEIMRR+H++ PKLQH+
Sbjct: 384  LGELAFDLFMEMERISVVPDDITFIGVLSACAHAGLVKEGLMCFEIMRRIHRLEPKLQHF 443

Query: 117  GCMVDILGRAGHVEAATRFVKEMPIEPNDVVWRTLLSAC 1
            GC+VDILGRAG +E A + V+EMPIEPNDV+WRTLLSAC
Sbjct: 444  GCVVDILGRAGKLEEAWKVVEEMPIEPNDVIWRTLLSAC 482