BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia23_contig00014855
         (3711 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011085923.1| PREDICTED: DNA-directed RNA polymerase III s...  2117   0.0  
ref|XP_009604369.1| PREDICTED: DNA-directed RNA polymerase III s...  1974   0.0  
ref|XP_010659064.1| PREDICTED: DNA-directed RNA polymerase III s...  1973   0.0  
ref|XP_009758465.1| PREDICTED: DNA-directed RNA polymerase III s...  1970   0.0  
ref|XP_006362214.1| PREDICTED: DNA-directed RNA polymerase III s...  1964   0.0  
ref|XP_010312066.1| PREDICTED: DNA-directed RNA polymerase III s...  1955   0.0  
ref|XP_012849950.1| PREDICTED: DNA-directed RNA polymerase III s...  1950   0.0  
ref|XP_007010799.1| DNA-directed RNA polymerase isoform 1 [Theob...  1925   0.0  
ref|XP_007010801.1| DNA-directed RNA polymerase isoform 3 [Theob...  1910   0.0  
ref|XP_006494572.1| PREDICTED: DNA-directed RNA polymerase III s...  1900   0.0  
ref|XP_006432385.1| hypothetical protein CICLE_v10000078mg [Citr...  1899   0.0  
ref|XP_010242622.1| PREDICTED: DNA-directed RNA polymerase III s...  1878   0.0  
ref|XP_010242621.1| PREDICTED: DNA-directed RNA polymerase III s...  1873   0.0  
ref|XP_012459628.1| PREDICTED: DNA-directed RNA polymerase III s...  1871   0.0  
gb|KJB75029.1| hypothetical protein B456_012G019600 [Gossypium r...  1866   0.0  
ref|XP_010043725.1| PREDICTED: DNA-directed RNA polymerase III s...  1857   0.0  
ref|XP_011003287.1| PREDICTED: DNA-directed RNA polymerase III s...  1853   0.0  
ref|XP_004141655.2| PREDICTED: DNA-directed RNA polymerase III s...  1851   0.0  
ref|XP_011003286.1| PREDICTED: DNA-directed RNA polymerase III s...  1848   0.0  
ref|XP_008462447.1| PREDICTED: DNA-directed RNA polymerase III s...  1847   0.0  

>ref|XP_011085923.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2 [Sesamum
            indicum]
          Length = 1152

 Score = 2117 bits (5484), Expect = 0.0
 Identities = 1051/1154 (91%), Positives = 1100/1154 (95%)
 Frame = -2

Query: 3671 MGVKEEDSALLNDLQEQGLKIDKQSLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYF 3492
            M V+E D AL +DL+E+ L IDKQ+LAAPVK+AVDKFQLLPEFLKVRGLVKQHLDSFNYF
Sbjct: 1    MVVRENDPAL-SDLEEKSLGIDKQALAAPVKNAVDKFQLLPEFLKVRGLVKQHLDSFNYF 59

Query: 3491 LRTQIKKIVRANDLITSRVDPSIYLRYKDVRIGEPSIIIDGVTEKLTPHKCRLADLTYAA 3312
            +RTQIKKIV+ANDLITS++DPSIYLRYKDVRIGEPS+IIDGVTEKLTPHKCRL+D+TYAA
Sbjct: 60   VRTQIKKIVQANDLITSKIDPSIYLRYKDVRIGEPSVIIDGVTEKLTPHKCRLSDITYAA 119

Query: 3311 PIYVNIEYITGSHGSKTTQMKRDVIIGRMPIMLRSCCCVLYGKDEEELARCGECPLDPGG 3132
            PIYVNIEYITGSHGSKTTQMKRDVIIGRMPIMLRSCCC+LYGKDEEELAR GECPLDPGG
Sbjct: 120  PIYVNIEYITGSHGSKTTQMKRDVIIGRMPIMLRSCCCILYGKDEEELARYGECPLDPGG 179

Query: 3131 YFVIKGTEKVILIQEQLSKNRIIIDTDKKNCVQASVTSSTEATKSKTVIKMEKEKIYLYL 2952
            YFVIKGTEKVILIQEQLSKNRIIIDTDKK CVQASVTSSTE TKSKTVI+MEKEKIYLYL
Sbjct: 180  YFVIKGTEKVILIQEQLSKNRIIIDTDKKGCVQASVTSSTEMTKSKTVIRMEKEKIYLYL 239

Query: 2951 NQFTSKVPIMMVMKAMGMESDQEVVQMIGRDPRYSELLLPSIEDCAKEAVYTQYQALEYL 2772
            NQFTSKVPIM+V+KAMGMESDQEVVQMIGRDPRYSELLLPSIEDC KEAV+TQ+QALE+L
Sbjct: 240  NQFTSKVPIMVVLKAMGMESDQEVVQMIGRDPRYSELLLPSIEDCVKEAVHTQHQALEFL 299

Query: 2771 EQKVKKLPYSNALIEKEGRALGILRDIFLANILVQQDNFRPKCIYVAVMLRRMMEAILNK 2592
            EQKVKKLPYS    +KEGRALGILRDIFLANI V+Q+NFRPKCIYVAVM+RR++EAILNK
Sbjct: 300  EQKVKKLPYSTPA-DKEGRALGILRDIFLANIPVRQNNFRPKCIYVAVMVRRILEAILNK 358

Query: 2591 DAMDDKDYAGNKRXXXXXXXXXXXXXXXFKTMNDEARKTIDTILAKPSRSSRFDISQFIV 2412
            DAMDDKDY GNKR               FKTMNDEARKTIDTILAKPSRSSRFDISQFIV
Sbjct: 359  DAMDDKDYVGNKRLELSGQLLSLLFEDLFKTMNDEARKTIDTILAKPSRSSRFDISQFIV 418

Query: 2411 KDSITVGLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKVSPQFEKSRKVSG 2232
            KDSITVGLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTK+SPQFEKSRKVSG
Sbjct: 419  KDSITVGLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSG 478

Query: 2231 PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEAPLVSLCYSLGVEDLELLS 2052
            PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTD+DE PL+SLCYSLGVEDLELLS
Sbjct: 479  PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDDDEGPLISLCYSLGVEDLELLS 538

Query: 2051 GEELHMPNSYLIILNGLILGKHRRPQWFANAMRKLRRAGKIGEFVSIFVNEKQRCVYIAS 1872
            GEELHMPNSYLIILNGLILGKHRRPQ FA AMRKLRR+GKIGEFVSIFVNEKQ  VYIAS
Sbjct: 539  GEELHMPNSYLIILNGLILGKHRRPQRFAKAMRKLRRSGKIGEFVSIFVNEKQHSVYIAS 598

Query: 1871 DGGRVCRPLVIADKGVPRIKEHHMKELRDGVRTFNSFLKDGLIEYLDVNEENNALIALYE 1692
            DGGRVCRPLVIADKGV RIKEHHMKEL+DGVR F+SFLK+GLIEYLDVNEENNALIALYE
Sbjct: 599  DGGRVCRPLVIADKGVSRIKEHHMKELKDGVRNFDSFLKEGLIEYLDVNEENNALIALYE 658

Query: 1691 ENAKEGTTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNELTRMDT 1512
            ENA E TTHIEIEPFTILG+ AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYN+L RMDT
Sbjct: 659  ENANERTTHIEIEPFTILGIIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDT 718

Query: 1511 LIYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG 1332
            LIYLLVYPQRPLLTTRTIELV +DKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG
Sbjct: 719  LIYLLVYPQRPLLTTRTIELVRFDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG 778

Query: 1331 RCIVMKKMAAISQKYENGTSDRIIRPQREGYEAERMQILDDDGLAAPGEIIRPHDIYINK 1152
            RCIV+KKM A+SQKYENGTSDRI+RP REGYEAERMQILDDDGLAAPGEIIRPHDIYINK
Sbjct: 779  RCIVIKKMTAVSQKYENGTSDRILRPPREGYEAERMQILDDDGLAAPGEIIRPHDIYINK 838

Query: 1151 ESPTITRGPVTSPMGLPDSAYKPSRQTYKGPEGETAVVDRVSLCSDKNSNLCIKFMIRHT 972
            ESP +TRGPVTSPMGLPDSAYKPSRQTYKGP+GET VVDRV+LCSD+N+NLCIKFMIRHT
Sbjct: 839  ESPIVTRGPVTSPMGLPDSAYKPSRQTYKGPDGETPVVDRVALCSDRNNNLCIKFMIRHT 898

Query: 971  RRPEVGDKFSSRHGQKGVCGTIVQQEDLPFSERGICPDLIMNPHGFPSRMTVGKMIELLG 792
            RRPE+GDKFSSRHGQKGVCG IVQQED PFSERGICPDLIMNPHGFPSRMTVGKMIELLG
Sbjct: 899  RRPELGDKFSSRHGQKGVCGNIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG 958

Query: 791  SKAGVSSGRFHYGSAFGEPSGHADRVEAISETLVKHGFSYSGKDFIYSGITGEPLQAYIF 612
             KAGVS GRFHYGSAFGEPSGHAD+VEAISETLVKHGFSY+GKDFIYSGITGEPLQAYIF
Sbjct: 959  GKAGVSCGRFHYGSAFGEPSGHADKVEAISETLVKHGFSYNGKDFIYSGITGEPLQAYIF 1018

Query: 611  MGPIYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASML 432
            MGPIYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASML
Sbjct: 1019 MGPIYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASML 1078

Query: 431  IYERLMISSDPFEVQVCRKCGLLGYYNFKLKTANCSTCKNGDNISTMKLPYACKLLFQEL 252
            IYERLMISSDPFEVQVCRKCGLLGYYNFKLKT  CSTCKNG+NISTMKLPYACKLL QEL
Sbjct: 1079 IYERLMISSDPFEVQVCRKCGLLGYYNFKLKTGICSTCKNGENISTMKLPYACKLLIQEL 1138

Query: 251  QAMNIVPRLKLTEA 210
            QAMNI+PRLKLTEA
Sbjct: 1139 QAMNIIPRLKLTEA 1152


>ref|XP_009604369.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Nicotiana
            tomentosiformis]
          Length = 1155

 Score = 1974 bits (5115), Expect = 0.0
 Identities = 979/1151 (85%), Positives = 1046/1151 (90%), Gaps = 2/1151 (0%)
 Frame = -2

Query: 3656 EDSALLNDLQEQGLKIDKQSLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFLRTQI 3477
            +DS + N   +    IDKQ LA+P+K+ VDK+QL+PEFLKVRGLVKQHLDSFNYF++T+I
Sbjct: 5    DDSTMSNPTNDLSHGIDKQYLASPIKNLVDKYQLVPEFLKVRGLVKQHLDSFNYFVKTEI 64

Query: 3476 KKIVRANDLITSRVDPSIYLRYKDVRIGEPSIIIDGVTEKLTPHKCRLADLTYAAPIYVN 3297
            KKIV+AN  I S +DP+IYL+Y DV IGEPSI++DGVTEKL P KCRL DLTYAAPIYV+
Sbjct: 65   KKIVQANKEIRSILDPNIYLKYNDVHIGEPSIMVDGVTEKLNPQKCRLCDLTYAAPIYVD 124

Query: 3296 IEYITGSHGSKTTQMKRDVIIGRMPIMLRSCCCVLYGKDEEELARCGECPLDPGGYFVIK 3117
            IEY TGSHG  + Q K++V IGRMP+MLRSCCCVLYGKDEEELA+ GECPLDPGGYFVIK
Sbjct: 125  IEYTTGSHGQISVQTKKNVTIGRMPVMLRSCCCVLYGKDEEELAKLGECPLDPGGYFVIK 184

Query: 3116 GTEKVILIQEQLSKNRIIIDTDKKNCVQASVTSSTEATKSKTVIKMEKEKIYLYLNQFTS 2937
            GTEKVILIQEQLSKNRIIIDTDKK CVQASVTSSTE TKSKT++KMEKEK+YL LN F +
Sbjct: 185  GTEKVILIQEQLSKNRIIIDTDKKGCVQASVTSSTEKTKSKTIVKMEKEKVYLELNMFKT 244

Query: 2936 KVPIMMVMKAMGMESDQEVVQMIGRDPRYSELLLPSIEDCAKEAVYTQYQALEYLE--QK 2763
            KVPIM+VMKAMGMESDQEVVQMIGRDPR+S LLLPSIE+CA   VYTQ+QALE+LE  + 
Sbjct: 245  KVPIMIVMKAMGMESDQEVVQMIGRDPRFSALLLPSIEECADLKVYTQHQALEFLESDKM 304

Query: 2762 VKKLPYSNALIEKEGRALGILRDIFLANILVQQDNFRPKCIYVAVMLRRMMEAILNKDAM 2583
            +K   YS   +EK  RAL ILRDIFLAN+ V Q NFR KCIYVAVM+RRMMEAILNKDAM
Sbjct: 305  LKMSSYSAGPVEKGARALSILRDIFLANVPVHQHNFRKKCIYVAVMMRRMMEAILNKDAM 364

Query: 2582 DDKDYAGNKRXXXXXXXXXXXXXXXFKTMNDEARKTIDTILAKPSRSSRFDISQFIVKDS 2403
            DDKDY GNKR               FKTMNDEARKT+D +LA+PSRSSR DIS FI KDS
Sbjct: 365  DDKDYVGNKRLELSGQLLSLLFEDLFKTMNDEARKTVDALLARPSRSSRLDISPFIAKDS 424

Query: 2402 ITVGLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKVSPQFEKSRKVSGPRA 2223
            ITVG+ERTLSTGNWDVKRFRMHRKGMTQVVARLSYIG+LGHMTK+SPQFEKSRKVSGPRA
Sbjct: 425  ITVGMERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRA 484

Query: 2222 LQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEAPLVSLCYSLGVEDLELLSGEE 2043
            LQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDE P++SLCY LGVEDLE LS EE
Sbjct: 485  LQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEHPIISLCYCLGVEDLEQLSAEE 544

Query: 2042 LHMPNSYLIILNGLILGKHRRPQWFANAMRKLRRAGKIGEFVSIFVNEKQRCVYIASDGG 1863
            LHMP+SYLIILNGLILGKHR PQ FANAMRKLRRAGKIGEF+SIFVNEKQR VYIASDGG
Sbjct: 545  LHMPSSYLIILNGLILGKHRSPQRFANAMRKLRRAGKIGEFISIFVNEKQRSVYIASDGG 604

Query: 1862 RVCRPLVIADKGVPRIKEHHMKELRDGVRTFNSFLKDGLIEYLDVNEENNALIALYEENA 1683
            RVCRPLVIADKGV RIKE HMKELRDGVR F+SFLKDGLIEYLDVNEENN+LIALYE+ A
Sbjct: 605  RVCRPLVIADKGVSRIKEQHMKELRDGVRNFDSFLKDGLIEYLDVNEENNSLIALYEKEA 664

Query: 1682 KEGTTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNELTRMDTLIY 1503
               TTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYN+L+RMDTLIY
Sbjct: 665  TPETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLSRMDTLIY 724

Query: 1502 LLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI 1323
            LLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI
Sbjct: 725  LLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI 784

Query: 1322 VMKKMAAISQKYENGTSDRIIRPQREGYEAERMQILDDDGLAAPGEIIRPHDIYINKESP 1143
            VMKK +A   KYEN TSDRII+PQR+GYEAERMQILD+DGLA+PGEIIRPHDIYINKESP
Sbjct: 785  VMKKYSATCLKYENNTSDRIIKPQRQGYEAERMQILDEDGLASPGEIIRPHDIYINKESP 844

Query: 1142 TITRGPVTSPMGLPDSAYKPSRQTYKGPEGETAVVDRVSLCSDKNSNLCIKFMIRHTRRP 963
            T+TR PV+SPM LPDSAYKPSRQTYKGPEGET VVDRV+L SDKN+NLCIKFMIRHTRRP
Sbjct: 845  TVTRTPVSSPMSLPDSAYKPSRQTYKGPEGETPVVDRVALHSDKNNNLCIKFMIRHTRRP 904

Query: 962  EVGDKFSSRHGQKGVCGTIVQQEDLPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKA 783
            E+GDKFSSRHGQKGVCGTIVQQED PFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKA
Sbjct: 905  EIGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKA 964

Query: 782  GVSSGRFHYGSAFGEPSGHADRVEAISETLVKHGFSYSGKDFIYSGITGEPLQAYIFMGP 603
            GVS GRFHYGSAFGEPSGHAD V+ ISETLVKHGFSY+GKDFIYSGITG PLQAYIFMGP
Sbjct: 965  GVSCGRFHYGSAFGEPSGHADTVDTISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGP 1024

Query: 602  IYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYE 423
            IYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYE
Sbjct: 1025 IYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYE 1084

Query: 422  RLMISSDPFEVQVCRKCGLLGYYNFKLKTANCSTCKNGDNISTMKLPYACKLLFQELQAM 243
            RLMISSDPFEVQVCRKCGLLGYYN+KLKT  CS CKNG+NISTMKLPYACKLL QELQ+M
Sbjct: 1085 RLMISSDPFEVQVCRKCGLLGYYNYKLKTGICSMCKNGENISTMKLPYACKLLIQELQSM 1144

Query: 242  NIVPRLKLTEA 210
            NIVPRLKL EA
Sbjct: 1145 NIVPRLKLAEA 1155


>ref|XP_010659064.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Vitis
            vinifera] gi|731414225|ref|XP_010659065.1| PREDICTED:
            DNA-directed RNA polymerase III subunit RPC2 [Vitis
            vinifera]
          Length = 1157

 Score = 1973 bits (5111), Expect = 0.0
 Identities = 967/1140 (84%), Positives = 1046/1140 (91%)
 Frame = -2

Query: 3629 QEQGLKIDKQSLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFLRTQIKKIVRANDL 3450
            +++ + I K   A PVK AVDKF LLPEFLKVRGLVKQHLDSFNYF++T IKKIVRAND 
Sbjct: 18   KQEEMSIHKHFPADPVKQAVDKFPLLPEFLKVRGLVKQHLDSFNYFVKTDIKKIVRANDR 77

Query: 3449 ITSRVDPSIYLRYKDVRIGEPSIIIDGVTEKLTPHKCRLADLTYAAPIYVNIEYITGSHG 3270
            I S VDPSIYLR+KDVRIGEPSI +DG++EKL PH CRL+D+TYAAPI VNIEYITGSH 
Sbjct: 78   IVSSVDPSIYLRFKDVRIGEPSITVDGISEKLNPHTCRLSDMTYAAPILVNIEYITGSHV 137

Query: 3269 SKTTQMKRDVIIGRMPIMLRSCCCVLYGKDEEELARCGECPLDPGGYFVIKGTEKVILIQ 3090
             KT   K DV+IGRMPIMLRSCCCVLY KDE ELAR GECPLDPGGYFV+KGTEKVILIQ
Sbjct: 138  QKTRVEKNDVVIGRMPIMLRSCCCVLYKKDEAELARLGECPLDPGGYFVVKGTEKVILIQ 197

Query: 3089 EQLSKNRIIIDTDKKNCVQASVTSSTEATKSKTVIKMEKEKIYLYLNQFTSKVPIMMVMK 2910
            EQLSKNRIIIDTDKK  + ASVTSSTE+TKSKTVI MEKEKI+L LNQFTSK+PIM+VMK
Sbjct: 198  EQLSKNRIIIDTDKKGNINASVTSSTESTKSKTVIVMEKEKIWLQLNQFTSKIPIMIVMK 257

Query: 2909 AMGMESDQEVVQMIGRDPRYSELLLPSIEDCAKEAVYTQYQALEYLEQKVKKLPYSNALI 2730
            AMGMESDQEVVQM+GR+PRYS LLLPS+E+CA   +YTQ QALE+LE+KVKKLP+ N  +
Sbjct: 258  AMGMESDQEVVQMVGRNPRYSALLLPSMEECASHGIYTQQQALEFLERKVKKLPFYNPSL 317

Query: 2729 EKEGRALGILRDIFLANILVQQDNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYAGNKRX 2550
            EKEGR + ILRD F+AN+ V+Q+NFRPKC+YVAVMLRRMM+AILNKDAMDDKDY GNKR 
Sbjct: 318  EKEGRGMAILRDTFIANVPVRQNNFRPKCLYVAVMLRRMMDAILNKDAMDDKDYVGNKRL 377

Query: 2549 XXXXXXXXXXXXXXFKTMNDEARKTIDTILAKPSRSSRFDISQFIVKDSITVGLERTLST 2370
                          FKTM  E +KTID ILAKPSRSSRFD SQFIV+DSITVGLERTLST
Sbjct: 378  ELSGQLISLLFEDLFKTMISEVKKTIDAILAKPSRSSRFDFSQFIVRDSITVGLERTLST 437

Query: 2369 GNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKVSPQFEKSRKVSGPRALQPSQWGMLCP 2190
            GNWDVKRFRMHRKGM+QVVARLSYIG+LGHMTK+SPQFEKSRKVSGPRALQPSQWGMLCP
Sbjct: 438  GNWDVKRFRMHRKGMSQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCP 497

Query: 2189 CDTPEGEACGLVKNLALMTHVTTDEDEAPLVSLCYSLGVEDLELLSGEELHMPNSYLIIL 2010
            CDTPEGEACGLVKNLALMTHVTTDE+E+PL+SLCYSLGVEDLELLSGEELH PNS+LII 
Sbjct: 498  CDTPEGEACGLVKNLALMTHVTTDEEESPLISLCYSLGVEDLELLSGEELHTPNSFLIIF 557

Query: 2009 NGLILGKHRRPQWFANAMRKLRRAGKIGEFVSIFVNEKQRCVYIASDGGRVCRPLVIADK 1830
            NGLILGKHRRPQ FANA+RKLRRAGKIGEFVS+FVNEKQ CVYIASDGGRVCRP+VIADK
Sbjct: 558  NGLILGKHRRPQRFANALRKLRRAGKIGEFVSVFVNEKQHCVYIASDGGRVCRPVVIADK 617

Query: 1829 GVPRIKEHHMKELRDGVRTFNSFLKDGLIEYLDVNEENNALIALYEENAKEGTTHIEIEP 1650
            G  RIKEHHMKEL DGVRTF+ FL+DGLIEYLDVNEENNALIALYE +AK  TTHIEIEP
Sbjct: 618  GKSRIKEHHMKELIDGVRTFDDFLRDGLIEYLDVNEENNALIALYEADAKPETTHIEIEP 677

Query: 1649 FTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNELTRMDTLIYLLVYPQRPLLT 1470
            FTILGVCAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYN+L RMD+L+YLLVYPQRPLLT
Sbjct: 678  FTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDSLLYLLVYPQRPLLT 737

Query: 1469 TRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKMAAISQK 1290
            TRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKK +A++Q+
Sbjct: 738  TRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKFSAVNQR 797

Query: 1289 YENGTSDRIIRPQREGYEAERMQILDDDGLAAPGEIIRPHDIYINKESPTITRGPVTSPM 1110
            YEN  SDRI+RP + G++AERMQILDDDGLAAPGEII+P+DIYINKESP IT+GP+ SP+
Sbjct: 798  YENNASDRIVRPLKVGHDAERMQILDDDGLAAPGEIIKPNDIYINKESPIITKGPLISPV 857

Query: 1109 GLPDSAYKPSRQTYKGPEGETAVVDRVSLCSDKNSNLCIKFMIRHTRRPEVGDKFSSRHG 930
            GLPDSAYKPSRQT+KGPEGE +VVDRV+LCSDKNSNLCIKF+IRHTRRPEVGDKFSSRHG
Sbjct: 858  GLPDSAYKPSRQTFKGPEGEASVVDRVALCSDKNSNLCIKFLIRHTRRPEVGDKFSSRHG 917

Query: 929  QKGVCGTIVQQEDLPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSSGRFHYGS 750
            QKGVCGTI+QQED PFSERGICPDLIMNPHGFPSRMTVGKMIELLG KAGVS GRFHYGS
Sbjct: 918  QKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGS 977

Query: 749  AFGEPSGHADRVEAISETLVKHGFSYSGKDFIYSGITGEPLQAYIFMGPIYYQKLKHMVL 570
            AFGEPSGHAD+VE IS+TLVKHGFSYSGKDFIYSGITG PLQAYIFMGPIYYQKLKHMVL
Sbjct: 978  AFGEPSGHADKVETISKTLVKHGFSYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVL 1037

Query: 569  DKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEV 390
            DKMHARGSGPRVM+TRQPTEGR+RNGGLRVGEMERDCLIAYGASMLI+ERLM+SSDPFEV
Sbjct: 1038 DKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMVSSDPFEV 1097

Query: 389  QVCRKCGLLGYYNFKLKTANCSTCKNGDNISTMKLPYACKLLFQELQAMNIVPRLKLTEA 210
            QVCR CGLLGYYN KLK   CSTCKNGDNISTMKLPYACKLLFQELQAMN+VPRLKLTEA
Sbjct: 1098 QVCRVCGLLGYYNHKLKIGICSTCKNGDNISTMKLPYACKLLFQELQAMNVVPRLKLTEA 1157


>ref|XP_009758465.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Nicotiana
            sylvestris] gi|698523320|ref|XP_009758466.1| PREDICTED:
            DNA-directed RNA polymerase III subunit RPC2 [Nicotiana
            sylvestris]
          Length = 1155

 Score = 1970 bits (5104), Expect = 0.0
 Identities = 975/1151 (84%), Positives = 1046/1151 (90%), Gaps = 2/1151 (0%)
 Frame = -2

Query: 3656 EDSALLNDLQEQGLKIDKQSLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFLRTQI 3477
            +DS + N   +    IDKQ LA+P+K+ VDK+QL+PEFLKVRGLVKQHLDSFNYF++T+I
Sbjct: 5    DDSTMSNPTNDLSHGIDKQYLASPIKNLVDKYQLVPEFLKVRGLVKQHLDSFNYFVKTEI 64

Query: 3476 KKIVRANDLITSRVDPSIYLRYKDVRIGEPSIIIDGVTEKLTPHKCRLADLTYAAPIYVN 3297
            KKIV+AN  I S +DP+IYL+Y DV IGEPSI++DGVTEKL P KCRL D+TYAAPIYV+
Sbjct: 65   KKIVQANKEIRSILDPNIYLKYNDVHIGEPSIMVDGVTEKLNPQKCRLCDITYAAPIYVD 124

Query: 3296 IEYITGSHGSKTTQMKRDVIIGRMPIMLRSCCCVLYGKDEEELARCGECPLDPGGYFVIK 3117
            IEY TGSHG  + Q K++V IGRMP+MLRSCCCVLYGKDEEELA+ GECPLDPGGYFVIK
Sbjct: 125  IEYTTGSHGQISVQTKKNVTIGRMPVMLRSCCCVLYGKDEEELAKLGECPLDPGGYFVIK 184

Query: 3116 GTEKVILIQEQLSKNRIIIDTDKKNCVQASVTSSTEATKSKTVIKMEKEKIYLYLNQFTS 2937
            GTEKVILIQEQLSKNRIIIDTDKK CVQASVTSSTE TKSKT++KMEKEK+YL LN F +
Sbjct: 185  GTEKVILIQEQLSKNRIIIDTDKKGCVQASVTSSTEKTKSKTIVKMEKEKVYLELNMFKT 244

Query: 2936 KVPIMMVMKAMGMESDQEVVQMIGRDPRYSELLLPSIEDCAKEAVYTQYQALEYLE--QK 2763
            KVPIM+VMKAMGMESDQEVVQMIGRDPR+S LLLPSIE+CA   VYTQ QALE+LE  + 
Sbjct: 245  KVPIMIVMKAMGMESDQEVVQMIGRDPRFSALLLPSIEECADLKVYTQQQALEFLESDKM 304

Query: 2762 VKKLPYSNALIEKEGRALGILRDIFLANILVQQDNFRPKCIYVAVMLRRMMEAILNKDAM 2583
            +K   YS   +EK  RAL ILRDIFLAN+ V + NFR KCIYVAVM+RRMMEAILNKDAM
Sbjct: 305  LKMFSYSAGPVEKGARALSILRDIFLANVPVHKHNFRKKCIYVAVMMRRMMEAILNKDAM 364

Query: 2582 DDKDYAGNKRXXXXXXXXXXXXXXXFKTMNDEARKTIDTILAKPSRSSRFDISQFIVKDS 2403
            DDKDY GNKR               FKTMNDEARKT+D +LA+PSRSSR DIS +I KDS
Sbjct: 365  DDKDYVGNKRLELSGQLLSLLFEDLFKTMNDEARKTVDALLARPSRSSRLDISPYIAKDS 424

Query: 2402 ITVGLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKVSPQFEKSRKVSGPRA 2223
            ITVG+ERTLSTGNWDVKRFRMHRKGMTQVVARLSYIG+LGHMTK+SPQFEKSRKVSGPRA
Sbjct: 425  ITVGMERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRA 484

Query: 2222 LQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEAPLVSLCYSLGVEDLELLSGEE 2043
            LQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDE P++SLCY LGVEDLE LS EE
Sbjct: 485  LQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEQPIISLCYCLGVEDLEQLSAEE 544

Query: 2042 LHMPNSYLIILNGLILGKHRRPQWFANAMRKLRRAGKIGEFVSIFVNEKQRCVYIASDGG 1863
            LHMP+SYLIILNGLILGKHR PQ FANAMRKLRRAGKIGEF+SIFVNEKQR VYIASDGG
Sbjct: 545  LHMPSSYLIILNGLILGKHRSPQRFANAMRKLRRAGKIGEFISIFVNEKQRSVYIASDGG 604

Query: 1862 RVCRPLVIADKGVPRIKEHHMKELRDGVRTFNSFLKDGLIEYLDVNEENNALIALYEENA 1683
            RVCRPLVIADKGV RIKE HMKELRDGVR F+SFL+DGLIEYLDVNEENN+LIALYE+ A
Sbjct: 605  RVCRPLVIADKGVSRIKEQHMKELRDGVRNFDSFLRDGLIEYLDVNEENNSLIALYEKEA 664

Query: 1682 KEGTTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNELTRMDTLIY 1503
               TTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYN+L+RMDTLIY
Sbjct: 665  TPETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLSRMDTLIY 724

Query: 1502 LLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI 1323
            LLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI
Sbjct: 725  LLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI 784

Query: 1322 VMKKMAAISQKYENGTSDRIIRPQREGYEAERMQILDDDGLAAPGEIIRPHDIYINKESP 1143
            VMKK +A   KYEN TSDRII+PQR+GYEAERMQILD+DGLA+PGEIIRPHDIYINKESP
Sbjct: 785  VMKKYSATCLKYENNTSDRIIKPQRQGYEAERMQILDEDGLASPGEIIRPHDIYINKESP 844

Query: 1142 TITRGPVTSPMGLPDSAYKPSRQTYKGPEGETAVVDRVSLCSDKNSNLCIKFMIRHTRRP 963
            T+TR PV+SPM LPDSAYKPSRQTYKGPEGET VVDRV+L SDKN+NLCIKFMIRHTRRP
Sbjct: 845  TVTRTPVSSPMSLPDSAYKPSRQTYKGPEGETPVVDRVALHSDKNNNLCIKFMIRHTRRP 904

Query: 962  EVGDKFSSRHGQKGVCGTIVQQEDLPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKA 783
            E+GDKFSSRHGQKGVCGTIVQQED PFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKA
Sbjct: 905  EIGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKA 964

Query: 782  GVSSGRFHYGSAFGEPSGHADRVEAISETLVKHGFSYSGKDFIYSGITGEPLQAYIFMGP 603
            GVS GRFHYGSAFGEPSGHAD V+ ISETLVKHGFSY+GKDFIYSGITG PLQAYIFMGP
Sbjct: 965  GVSCGRFHYGSAFGEPSGHADTVDTISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGP 1024

Query: 602  IYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYE 423
            IYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYE
Sbjct: 1025 IYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYE 1084

Query: 422  RLMISSDPFEVQVCRKCGLLGYYNFKLKTANCSTCKNGDNISTMKLPYACKLLFQELQAM 243
            RLMISSDPFEVQVCRKCGLLGYYN+KLKT  CS CKNG+NISTMKLPYACKLL QELQ+M
Sbjct: 1085 RLMISSDPFEVQVCRKCGLLGYYNYKLKTGICSMCKNGENISTMKLPYACKLLIQELQSM 1144

Query: 242  NIVPRLKLTEA 210
            NIVPRLKL+EA
Sbjct: 1145 NIVPRLKLSEA 1155


>ref|XP_006362214.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like isoform
            X1 [Solanum tuberosum] gi|565393087|ref|XP_006362215.1|
            PREDICTED: DNA-directed RNA polymerase III subunit
            RPC2-like isoform X2 [Solanum tuberosum]
          Length = 1153

 Score = 1964 bits (5088), Expect = 0.0
 Identities = 976/1150 (84%), Positives = 1047/1150 (91%), Gaps = 2/1150 (0%)
 Frame = -2

Query: 3653 DSALLNDLQEQGLKIDKQSLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFLRTQIK 3474
            DS + N  ++    IDKQ LA+P+K+ VDK+QL+PEFLKVRGLVKQHLDSFNYF+RT+IK
Sbjct: 4    DSTMSNTTEDSNQGIDKQHLASPIKNLVDKYQLVPEFLKVRGLVKQHLDSFNYFVRTEIK 63

Query: 3473 KIVRANDLITSRVDPSIYLRYKDVRIGEPSIIIDGVTEKLTPHKCRLADLTYAAPIYVNI 3294
            KIVRAN  I S +DP+IYLRY+DV IGEPS++ D VTEKL P KCRL+D TYAAPIYV I
Sbjct: 64   KIVRANQEIRSILDPNIYLRYRDVHIGEPSMVFDAVTEKLCPQKCRLSDRTYAAPIYVTI 123

Query: 3293 EYITGSHGSKTTQMKRDVIIGRMPIMLRSCCCVLYGKDEEELARCGECPLDPGGYFVIKG 3114
            EY TGSHG  +   K++VIIGRMPIMLRS CCVLYGKDE+ELAR GECPLDPGGYFVIKG
Sbjct: 124  EYTTGSHGQTSVSTKKNVIIGRMPIMLRSSCCVLYGKDEDELARLGECPLDPGGYFVIKG 183

Query: 3113 TEKVILIQEQLSKNRIIIDTDKKNCVQASVTSSTEATKSKTVIKMEKEKIYLYLNQFTSK 2934
            TEKVILIQEQLSKNRIIIDTDKK  VQASVTSSTE TKSKT+IKMEKEK+YL LN F +K
Sbjct: 184  TEKVILIQEQLSKNRIIIDTDKKGSVQASVTSSTEKTKSKTIIKMEKEKVYLELNMFKTK 243

Query: 2933 VPIMMVMKAMGMESDQEVVQMIGRDPRYSELLLPSIEDCAKEAVYTQYQALEYLEQ-KVK 2757
            VPIM+VMKAMGMESDQEVVQMIGRDPR+S LLLPSIE+CA   +YTQ+QALE+LE  K+ 
Sbjct: 244  VPIMVVMKAMGMESDQEVVQMIGRDPRFSALLLPSIEECADLKLYTQHQALEFLESDKML 303

Query: 2756 KLP-YSNALIEKEGRALGILRDIFLANILVQQDNFRPKCIYVAVMLRRMMEAILNKDAMD 2580
            K+P YS   +EK  RAL ILRDIFLAN+ V Q NFR KCIYVAVM+RRMMEAILNKDAMD
Sbjct: 304  KMPSYSTGPVEKGARALSILRDIFLANVPVHQHNFRKKCIYVAVMMRRMMEAILNKDAMD 363

Query: 2579 DKDYAGNKRXXXXXXXXXXXXXXXFKTMNDEARKTIDTILAKPSRSSRFDISQFIVKDSI 2400
            DKDY GNKR               FKTMNDEAR+TIDT+LA+PSRSSR DISQ+IVKDSI
Sbjct: 364  DKDYVGNKRLELSGQLLSLLFEDLFKTMNDEARRTIDTLLARPSRSSRLDISQYIVKDSI 423

Query: 2399 TVGLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKVSPQFEKSRKVSGPRAL 2220
            T+GLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIG+LGHMTK+SPQFEKSRKVSGPRAL
Sbjct: 424  TMGLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRAL 483

Query: 2219 QPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEAPLVSLCYSLGVEDLELLSGEEL 2040
            QPSQ+GMLCPCDTPEGEACGLVKNLALMTHVTTDEDE P++SLCY LGVEDLE LS EEL
Sbjct: 484  QPSQFGMLCPCDTPEGEACGLVKNLALMTHVTTDEDERPIMSLCYCLGVEDLEQLSPEEL 543

Query: 2039 HMPNSYLIILNGLILGKHRRPQWFANAMRKLRRAGKIGEFVSIFVNEKQRCVYIASDGGR 1860
            HMP SYLI LNGLILGKH+ PQ FANAMR+LRRAGKIGEFVSIFVNEKQRCVYIASDGGR
Sbjct: 544  HMPTSYLITLNGLILGKHKSPQRFANAMRRLRRAGKIGEFVSIFVNEKQRCVYIASDGGR 603

Query: 1859 VCRPLVIADKGVPRIKEHHMKELRDGVRTFNSFLKDGLIEYLDVNEENNALIALYEENAK 1680
            VCRPLVIADKGV RIKEHHM+ELRDGVR F+SFLKDGLIEYLDVNEENN LIALYE+ A 
Sbjct: 604  VCRPLVIADKGVSRIKEHHMRELRDGVRDFDSFLKDGLIEYLDVNEENNTLIALYEKEAT 663

Query: 1679 EGTTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNELTRMDTLIYL 1500
              TTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYN+L RMD L+YL
Sbjct: 664  PETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDGLLYL 723

Query: 1499 LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV 1320
            LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV
Sbjct: 724  LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV 783

Query: 1319 MKKMAAISQKYENGTSDRIIRPQREGYEAERMQILDDDGLAAPGEIIRPHDIYINKESPT 1140
            MKK +AI QKYENGTSDRII+PQR+G+EA++MQILDDDG+AAPGE IR HDIYINKESPT
Sbjct: 784  MKKYSAICQKYENGTSDRIIKPQRQGFEADKMQILDDDGMAAPGETIRNHDIYINKESPT 843

Query: 1139 ITRGPVTSPMGLPDSAYKPSRQTYKGPEGETAVVDRVSLCSDKNSNLCIKFMIRHTRRPE 960
            +TR P+TSPMGLPDSAYK SRQTYKGPEGETAVVDRV+L SD+N+NL IKFMIRHTRRPE
Sbjct: 844  VTRTPITSPMGLPDSAYKTSRQTYKGPEGETAVVDRVALYSDRNNNLSIKFMIRHTRRPE 903

Query: 959  VGDKFSSRHGQKGVCGTIVQQEDLPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAG 780
            +GDKFSSRHGQKGVCGTIVQQED PFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAG
Sbjct: 904  IGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAG 963

Query: 779  VSSGRFHYGSAFGEPSGHADRVEAISETLVKHGFSYSGKDFIYSGITGEPLQAYIFMGPI 600
            VS GRFHYGSAFGEPSGHAD V++ISETLVKHGFSY+GKDFIYSGITG PLQAYIFMGPI
Sbjct: 964  VSCGRFHYGSAFGEPSGHADTVDSISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPI 1023

Query: 599  YYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYER 420
            YYQKLKHMVLDKMHARGSGPRVM+TRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYER
Sbjct: 1024 YYQKLKHMVLDKMHARGSGPRVMMTRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYER 1083

Query: 419  LMISSDPFEVQVCRKCGLLGYYNFKLKTANCSTCKNGDNISTMKLPYACKLLFQELQAMN 240
            LMISSDPFEVQVCRKCGLLGYYN+KLKT  CS CKNG+NISTMKLPYACKLLFQELQ+MN
Sbjct: 1084 LMISSDPFEVQVCRKCGLLGYYNYKLKTGICSMCKNGENISTMKLPYACKLLFQELQSMN 1143

Query: 239  IVPRLKLTEA 210
            IVPRLKL EA
Sbjct: 1144 IVPRLKLAEA 1153


>ref|XP_010312066.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Solanum
            lycopersicum] gi|723738099|ref|XP_010312067.1| PREDICTED:
            DNA-directed RNA polymerase III subunit RPC2 [Solanum
            lycopersicum]
          Length = 1153

 Score = 1955 bits (5064), Expect = 0.0
 Identities = 973/1150 (84%), Positives = 1044/1150 (90%), Gaps = 2/1150 (0%)
 Frame = -2

Query: 3653 DSALLNDLQEQGLKIDKQSLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFLRTQIK 3474
            DS + N  ++    IDKQ LA+ +K+ VDK+QL+PEFLKVRGLVKQHLDSFNYF+RT+IK
Sbjct: 4    DSTMSNTTEDSNQGIDKQHLASHIKNLVDKYQLVPEFLKVRGLVKQHLDSFNYFVRTEIK 63

Query: 3473 KIVRANDLITSRVDPSIYLRYKDVRIGEPSIIIDGVTEKLTPHKCRLADLTYAAPIYVNI 3294
            KIVRAN  I S +DP+IYLRY+DV IGEPS++ D VTEKL P KCRL+D TYAAPIYV I
Sbjct: 64   KIVRANQEIRSTLDPNIYLRYRDVHIGEPSMVFDAVTEKLCPQKCRLSDRTYAAPIYVTI 123

Query: 3293 EYITGSHGSKTTQMKRDVIIGRMPIMLRSCCCVLYGKDEEELARCGECPLDPGGYFVIKG 3114
            +Y TGSHG  +   K++VIIGRMPIMLRS CCVLYGKDE+ELAR GECPLDPGGYFVIKG
Sbjct: 124  DYTTGSHGQTSVSTKKNVIIGRMPIMLRSSCCVLYGKDEDELARLGECPLDPGGYFVIKG 183

Query: 3113 TEKVILIQEQLSKNRIIIDTDKKNCVQASVTSSTEATKSKTVIKMEKEKIYLYLNQFTSK 2934
            TEKVILIQEQLSKNRIIIDTDKK  VQASVTSSTE TKSKT+IKMEKEK+YL LN F +K
Sbjct: 184  TEKVILIQEQLSKNRIIIDTDKKGSVQASVTSSTEKTKSKTIIKMEKEKVYLELNMFKTK 243

Query: 2933 VPIMMVMKAMGMESDQEVVQMIGRDPRYSELLLPSIEDCAKEAVYTQYQALEYLEQ-KVK 2757
            VPIM+VMKAMGMESDQEVVQMIGRDPR+S LLLPSIE+CA   +YTQ QALE+LE  K+ 
Sbjct: 244  VPIMVVMKAMGMESDQEVVQMIGRDPRFSALLLPSIEECADLKLYTQQQALEFLESDKML 303

Query: 2756 KLP-YSNALIEKEGRALGILRDIFLANILVQQDNFRPKCIYVAVMLRRMMEAILNKDAMD 2580
            K+P YS   IEK  RAL ILRDIFLAN+ V Q NFR KCIYVAVM+RRMMEAILNKDAMD
Sbjct: 304  KMPSYSTGPIEKGARALSILRDIFLANVPVHQHNFRKKCIYVAVMMRRMMEAILNKDAMD 363

Query: 2579 DKDYAGNKRXXXXXXXXXXXXXXXFKTMNDEARKTIDTILAKPSRSSRFDISQFIVKDSI 2400
            DKDY GNKR               FKTMNDEAR+TIDT+LA+PSRSSR DISQ+I+KDSI
Sbjct: 364  DKDYVGNKRLELSGQLLSLLFEDLFKTMNDEARRTIDTLLARPSRSSRLDISQYIIKDSI 423

Query: 2399 TVGLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKVSPQFEKSRKVSGPRAL 2220
            T+GLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIG+LGHMTK+SPQFEKSRKVSGPRAL
Sbjct: 424  TMGLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRAL 483

Query: 2219 QPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEAPLVSLCYSLGVEDLELLSGEEL 2040
            QPSQ+GMLCPCDTPEGEACGLVKNLALMTHVTTDEDE P++SLCY LGVEDLE LS EEL
Sbjct: 484  QPSQFGMLCPCDTPEGEACGLVKNLALMTHVTTDEDERPIMSLCYCLGVEDLEQLSPEEL 543

Query: 2039 HMPNSYLIILNGLILGKHRRPQWFANAMRKLRRAGKIGEFVSIFVNEKQRCVYIASDGGR 1860
            HMP SYLI LNGLILGKH+ PQ FANAMR+LRRAGK+GEFVSIFVNEKQRCVYIASDGGR
Sbjct: 544  HMPTSYLITLNGLILGKHKSPQRFANAMRRLRRAGKVGEFVSIFVNEKQRCVYIASDGGR 603

Query: 1859 VCRPLVIADKGVPRIKEHHMKELRDGVRTFNSFLKDGLIEYLDVNEENNALIALYEENAK 1680
            VCRPLVIADKGV RIKEHHM+ELRDG+R F+SFLKDGLIEYLDVNEENN LIALYE+ A 
Sbjct: 604  VCRPLVIADKGVSRIKEHHMRELRDGLRDFDSFLKDGLIEYLDVNEENNTLIALYEKEAT 663

Query: 1679 EGTTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNELTRMDTLIYL 1500
              TTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYN+L RMD L+YL
Sbjct: 664  PETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDGLLYL 723

Query: 1499 LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV 1320
            LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV
Sbjct: 724  LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV 783

Query: 1319 MKKMAAISQKYENGTSDRIIRPQREGYEAERMQILDDDGLAAPGEIIRPHDIYINKESPT 1140
            MKK +AI QKYENGTSDRII+PQR+G EA+RMQILDDDG+AAPGE IR HDIYINKESPT
Sbjct: 784  MKKYSAICQKYENGTSDRIIKPQRQGPEADRMQILDDDGMAAPGETIRNHDIYINKESPT 843

Query: 1139 ITRGPVTSPMGLPDSAYKPSRQTYKGPEGETAVVDRVSLCSDKNSNLCIKFMIRHTRRPE 960
            +TR PVTSPMGLPDSAYK S+QTYKGPEGETAVVDRV+L SD+N+NL IKFMIRHTRRPE
Sbjct: 844  VTRTPVTSPMGLPDSAYKSSKQTYKGPEGETAVVDRVALYSDRNNNLSIKFMIRHTRRPE 903

Query: 959  VGDKFSSRHGQKGVCGTIVQQEDLPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAG 780
            +GDKFSSRHGQKGVCGTIVQQED PFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAG
Sbjct: 904  LGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAG 963

Query: 779  VSSGRFHYGSAFGEPSGHADRVEAISETLVKHGFSYSGKDFIYSGITGEPLQAYIFMGPI 600
            VS GRFHYGSAFGEPSGHAD V+AISETLVKHGFSY+GKDFIYSGITG PLQAYIFMGPI
Sbjct: 964  VSCGRFHYGSAFGEPSGHADTVDAISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPI 1023

Query: 599  YYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYER 420
            YYQKLKHMV+DKMHARGSGPRVM+TRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYER
Sbjct: 1024 YYQKLKHMVVDKMHARGSGPRVMMTRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYER 1083

Query: 419  LMISSDPFEVQVCRKCGLLGYYNFKLKTANCSTCKNGDNISTMKLPYACKLLFQELQAMN 240
            LMISSDPFEVQVCRKCGLLGYYN+KLKT  CS CKNG+NISTMKLPYACKLLFQELQ+MN
Sbjct: 1084 LMISSDPFEVQVCRKCGLLGYYNYKLKTGICSMCKNGENISTMKLPYACKLLFQELQSMN 1143

Query: 239  IVPRLKLTEA 210
            IVPRLKL EA
Sbjct: 1144 IVPRLKLAEA 1153


>ref|XP_012849950.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Erythranthe
            guttatus]
          Length = 1153

 Score = 1950 bits (5052), Expect = 0.0
 Identities = 960/1150 (83%), Positives = 1042/1150 (90%)
 Frame = -2

Query: 3659 EEDSALLNDLQEQGLKIDKQSLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFLRTQ 3480
            ++D  L  DLQE+G++IDKQ LAAPVK++VDKFQLLPEFLKVRGLVKQHLDS+NYF+RT 
Sbjct: 4    DDDLGLCTDLQEKGMEIDKQFLAAPVKTSVDKFQLLPEFLKVRGLVKQHLDSYNYFVRTH 63

Query: 3479 IKKIVRANDLITSRVDPSIYLRYKDVRIGEPSIIIDGVTEKLTPHKCRLADLTYAAPIYV 3300
            IKKIV+ANDLIT+  DPSIYLRYKDVRIGEPS+++DGVTEKLTP KCRL D TY APIYV
Sbjct: 64   IKKIVQANDLITATKDPSIYLRYKDVRIGEPSMVLDGVTEKLTPQKCRLLDTTYTAPIYV 123

Query: 3299 NIEYITGSHGSKTTQMKRDVIIGRMPIMLRSCCCVLYGKDEEELARCGECPLDPGGYFVI 3120
            NIEY+TGSHGSKTTQMKRDVIIGRMP+MLRSCCC+L+GKDEEELA+ GECPLDPGGYFV+
Sbjct: 124  NIEYVTGSHGSKTTQMKRDVIIGRMPVMLRSCCCILHGKDEEELAKYGECPLDPGGYFVV 183

Query: 3119 KGTEKVILIQEQLSKNRIIIDTDKKNCVQASVTSSTEATKSKTVIKMEKEKIYLYLNQFT 2940
            KG EKV+LIQEQLSKNRIIIDTD K CVQASV S T  TKSKT+I+MEKEKIYL LN+F 
Sbjct: 184  KGNEKVLLIQEQLSKNRIIIDTDNKGCVQASVASITAKTKSKTIIRMEKEKIYLLLNKFG 243

Query: 2939 SKVPIMMVMKAMGMESDQEVVQMIGRDPRYSELLLPSIEDCAKEAVYTQYQALEYLEQKV 2760
            +KVPIM+V+KAMGMESDQEVVQMIGRDPRYSELLLPSIEDC KE+V+TQ+QAL +L+ KV
Sbjct: 244  TKVPIMIVLKAMGMESDQEVVQMIGRDPRYSELLLPSIEDCVKESVHTQHQALAFLDHKV 303

Query: 2759 KKLPYSNALIEKEGRALGILRDIFLANILVQQDNFRPKCIYVAVMLRRMMEAILNKDAMD 2580
                Y +   EKEGRAL ILRDIFLANI V QDNFR KCIYVAVM+RRMMEAILNKDAMD
Sbjct: 304  NNRSYYSTTYEKEGRALSILRDIFLANIPVDQDNFRSKCIYVAVMVRRMMEAILNKDAMD 363

Query: 2579 DKDYAGNKRXXXXXXXXXXXXXXXFKTMNDEARKTIDTILAKPSRSSRFDISQFIVKDSI 2400
            DKDY GNKR               FK+MN+EA K+ID ILAKPSRSSR DISQ+IVKDSI
Sbjct: 364  DKDYVGNKRLELSGQMLSLLFEDLFKSMNEEAVKSIDKILAKPSRSSRLDISQYIVKDSI 423

Query: 2399 TVGLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKVSPQFEKSRKVSGPRAL 2220
            T GLERTLSTGN+D+KRF ++RKGM Q VARLSYI T+GHMTK+ PQFEKSRKVSGPRAL
Sbjct: 424  TFGLERTLSTGNFDLKRFGVNRKGMAQAVARLSYIATVGHMTKIIPQFEKSRKVSGPRAL 483

Query: 2219 QPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEAPLVSLCYSLGVEDLELLSGEEL 2040
            QPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDE PL+SLCY+LGVE  E LSGEE+
Sbjct: 484  QPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCYTLGVESFEYLSGEEV 543

Query: 2039 HMPNSYLIILNGLILGKHRRPQWFANAMRKLRRAGKIGEFVSIFVNEKQRCVYIASDGGR 1860
            HMPNSYLII NGLI+GKHRRPQ F+NAMR LRRAGKIGEF+SIFVNEKQRCVYIASDGGR
Sbjct: 544  HMPNSYLIIFNGLIIGKHRRPQRFSNAMRTLRRAGKIGEFISIFVNEKQRCVYIASDGGR 603

Query: 1859 VCRPLVIADKGVPRIKEHHMKELRDGVRTFNSFLKDGLIEYLDVNEENNALIALYEENAK 1680
            VCRPLVIADKGV RIKEHHMKEL+DGVRTF+SFLKDGLIEYLDVNEENNALIALYE+NAK
Sbjct: 604  VCRPLVIADKGVSRIKEHHMKELKDGVRTFDSFLKDGLIEYLDVNEENNALIALYEDNAK 663

Query: 1679 EGTTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNELTRMDTLIYL 1500
            E TTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYN+  R DTL+ L
Sbjct: 664  EKTTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQYCRTDTLMCL 723

Query: 1499 LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV 1320
            LVYPQRPLLTTRTIELV +DKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV
Sbjct: 724  LVYPQRPLLTTRTIELVSFDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV 783

Query: 1319 MKKMAAISQKYENGTSDRIIRPQREGYEAERMQILDDDGLAAPGEIIRPHDIYINKESPT 1140
            MK+M ++  KYEN TSDRII+PQREG + E+MQILDDDGLAAPG+ IR  DIYINK+SP 
Sbjct: 784  MKRMVSVCLKYENSTSDRIIKPQREGQDCEKMQILDDDGLAAPGQTIRADDIYINKQSPI 843

Query: 1139 ITRGPVTSPMGLPDSAYKPSRQTYKGPEGETAVVDRVSLCSDKNSNLCIKFMIRHTRRPE 960
            +TR PV SPM LPDS+Y+ SR+ YKG  GE+AV+DRV+L SD+++N+ IKFM R TRRPE
Sbjct: 844  VTRVPVKSPMALPDSSYRSSREHYKGSVGESAVIDRVALFSDRDNNMKIKFMTRQTRRPE 903

Query: 959  VGDKFSSRHGQKGVCGTIVQQEDLPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAG 780
            VGDKFSSRHGQKGVCGTIVQQED PFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAG
Sbjct: 904  VGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAG 963

Query: 779  VSSGRFHYGSAFGEPSGHADRVEAISETLVKHGFSYSGKDFIYSGITGEPLQAYIFMGPI 600
            VS GRFHYGSAFGEPSGHAD+VE ISETLVKHGFSY+GKDF+YSGITGEPLQAYIFMGPI
Sbjct: 964  VSCGRFHYGSAFGEPSGHADKVETISETLVKHGFSYNGKDFLYSGITGEPLQAYIFMGPI 1023

Query: 599  YYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYER 420
            YYQKLKHMVLDKMHARG GP+VM+TRQPTEGRS NGGLRVGEMERDCLIAYG SML+YER
Sbjct: 1024 YYQKLKHMVLDKMHARGHGPKVMMTRQPTEGRSNNGGLRVGEMERDCLIAYGTSMLLYER 1083

Query: 419  LMISSDPFEVQVCRKCGLLGYYNFKLKTANCSTCKNGDNISTMKLPYACKLLFQELQAMN 240
            LMISSD F VQVCRKCGLLGYYNFKLKT  CSTCKNGDNISTMKLPYACKLL QELQ+MN
Sbjct: 1084 LMISSDEFVVQVCRKCGLLGYYNFKLKTGICSTCKNGDNISTMKLPYACKLLIQELQSMN 1143

Query: 239  IVPRLKLTEA 210
            IVPRLKLTEA
Sbjct: 1144 IVPRLKLTEA 1153


>ref|XP_007010799.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
            gi|508727712|gb|EOY19609.1| DNA-directed RNA polymerase
            isoform 1 [Theobroma cacao]
          Length = 1158

 Score = 1925 bits (4986), Expect = 0.0
 Identities = 952/1158 (82%), Positives = 1037/1158 (89%), Gaps = 4/1158 (0%)
 Frame = -2

Query: 3671 MGVKEEDSALLNDLQEQGLK---IDKQSLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSF 3501
            MG+K+ED  L N+     +    +DKQ LAAP+KSAVDKFQLLPEFLKVRGLVKQHLDSF
Sbjct: 1    MGLKQEDLLLNNNTNNSNVSEMPVDKQKLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSF 60

Query: 3500 NYFLRTQIKKIVRANDLITSRVDPSIYLRYKDVRIGEPSIIIDGVTEKLTPHKCRLADLT 3321
            NYF+ T IKKIVRAND I S VDPSIYLR+KDVRIGEPS+ I+ V+EK+ PH CRL+D+T
Sbjct: 61   NYFVNTGIKKIVRANDRIVSGVDPSIYLRFKDVRIGEPSMTINAVSEKINPHTCRLSDMT 120

Query: 3320 YAAPIYVNIEYITGSHGSKTTQMKRDVIIGRMPIMLRSCCCVLYGKDEEELARCGECPLD 3141
            YAAPI+VNIEYI GSHG KT   K D++IGRMPIMLRSCCCVLYGKDE ELAR GECPLD
Sbjct: 121  YAAPIFVNIEYIQGSHGQKTRLEKNDLVIGRMPIMLRSCCCVLYGKDEAELARLGECPLD 180

Query: 3140 PGGYFVIKGTEKVILIQEQLSKNRIIIDTDKKNCVQASVTSSTEATKSKTVIKMEKEKIY 2961
            PGGYFVIKG EKVILIQEQLSKNRIIID DKK  + ASVTSS+EATKSKTVI+MEKEKIY
Sbjct: 181  PGGYFVIKGAEKVILIQEQLSKNRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIY 240

Query: 2960 LYLNQFTSKVPIMMVMKAMGMESDQEVVQMIGRDPRYSELLLPSIEDCAKEAVYTQYQAL 2781
            L LNQF  K+PIM+VMKAMGMESDQEVVQM+GRDP Y+ +LLPSIE+CA   +YTQ QAL
Sbjct: 241  LLLNQFVKKIPIMVVMKAMGMESDQEVVQMVGRDPHYNAVLLPSIEECAGVGIYTQEQAL 300

Query: 2780 EYLEQKVKKLPYSNALIEKEGRALGILRDIFLANILVQQDNFRPKCIYVAVMLRRMMEAI 2601
            EYLE KVK++ Y+    EKEGRAL ILRD+FLAN+ V+ +NFRPKC+YVAVMLRRM+EAI
Sbjct: 301  EYLETKVKRVMYTGPASEKEGRALSILRDVFLANVPVRSNNFRPKCLYVAVMLRRMVEAI 360

Query: 2600 LNKDAMDDKDYAGNKRXXXXXXXXXXXXXXXFKTMNDEARKTIDTILAKPSRSSRFDISQ 2421
            LNKDAMDDKDY GNKR               FKT   E +K ID +L+KPSRSS  D SQ
Sbjct: 361  LNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTTISEVQKMIDLVLSKPSRSSALDPSQ 420

Query: 2420 FI-VKDSITVGLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKVSPQFEKSR 2244
            F+  +++IT GLERTLSTGN+D+KRF+MHRKGMTQV+ARLS+IGTLG+MTKVSPQFEKSR
Sbjct: 421  FLRSRETITFGLERTLSTGNFDIKRFKMHRKGMTQVLARLSFIGTLGYMTKVSPQFEKSR 480

Query: 2243 KVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEAPLVSLCYSLGVEDL 2064
            KVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDE PL+SLCY LGVEDL
Sbjct: 481  KVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCYCLGVEDL 540

Query: 2063 ELLSGEELHMPNSYLIILNGLILGKHRRPQWFANAMRKLRRAGKIGEFVSIFVNEKQRCV 1884
            ELLSGEELH PNS+L+ILNGLILGKHRRPQ FA AMRKLRRAGK+GEFVS+FVNEKQRCV
Sbjct: 541  ELLSGEELHTPNSFLVILNGLILGKHRRPQHFAVAMRKLRRAGKVGEFVSVFVNEKQRCV 600

Query: 1883 YIASDGGRVCRPLVIADKGVPRIKEHHMKELRDGVRTFNSFLKDGLIEYLDVNEENNALI 1704
            YIASDGGRVCRPLVIADKGV RIKEHHMKEL DGVRTF+ FL+DGLIEYLDVNEENNALI
Sbjct: 601  YIASDGGRVCRPLVIADKGVSRIKEHHMKELLDGVRTFDDFLRDGLIEYLDVNEENNALI 660

Query: 1703 ALYEENAKEGTTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNELT 1524
            ALYE  A   TTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYN+L 
Sbjct: 661  ALYEGEATPETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLC 720

Query: 1523 RMDTLIYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLD 1344
            RMDTL+YLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLD
Sbjct: 721  RMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLD 780

Query: 1343 RGFGRCIVMKKMAAISQKYENGTSDRIIRPQREGYEAERMQILDDDGLAAPGEIIRPHDI 1164
            RGFGRCIVMK+ +A++QKYE G SDRI+RPQR G  +ERMQILDDDG+A PGEIIRP+DI
Sbjct: 781  RGFGRCIVMKRYSAVNQKYETGASDRILRPQRTGPGSERMQILDDDGIATPGEIIRPNDI 840

Query: 1163 YINKESPTITRGPVTSPMGLPDSAYKPSRQTYKGPEGETAVVDRVSLCSDKNSNLCIKFM 984
            YINKES   TRG   S   LPDSAY+P+RQTYKGPEGE+ VVDRV+LC+D+NSNL IKF+
Sbjct: 841  YINKESSIHTRGSRVSSESLPDSAYRPARQTYKGPEGESCVVDRVALCTDRNSNLSIKFL 900

Query: 983  IRHTRRPEVGDKFSSRHGQKGVCGTIVQQEDLPFSERGICPDLIMNPHGFPSRMTVGKMI 804
            IRHTRRPEVGDKFSSRHGQKGVCGTI+QQED PFSERGICPDLIMNPHGFPSRMTVGKMI
Sbjct: 901  IRHTRRPEVGDKFSSRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMI 960

Query: 803  ELLGSKAGVSSGRFHYGSAFGEPSGHADRVEAISETLVKHGFSYSGKDFIYSGITGEPLQ 624
            ELLG KAGVS GRFHYGSAFGEPSGHADRVEAISETL+KHGFSY+GKDFIYSGITG PLQ
Sbjct: 961  ELLGGKAGVSCGRFHYGSAFGEPSGHADRVEAISETLIKHGFSYNGKDFIYSGITGCPLQ 1020

Query: 623  AYIFMGPIYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYG 444
            AYIFMGPIYYQKLKHMVLDKMHARG+GPRVM+TRQPTEGR+RNGGLRVGEMERDCLIAYG
Sbjct: 1021 AYIFMGPIYYQKLKHMVLDKMHARGNGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYG 1080

Query: 443  ASMLIYERLMISSDPFEVQVCRKCGLLGYYNFKLKTANCSTCKNGDNISTMKLPYACKLL 264
            ASMLI+ERLMISSDPFEVQVCRKCGLLGYY+ KLKT  CS+CKNGDN+STMKLPYACKLL
Sbjct: 1081 ASMLIFERLMISSDPFEVQVCRKCGLLGYYSHKLKTGICSSCKNGDNVSTMKLPYACKLL 1140

Query: 263  FQELQAMNIVPRLKLTEA 210
             QELQ+MNIVPRLKL+EA
Sbjct: 1141 IQELQSMNIVPRLKLSEA 1158


>ref|XP_007010801.1| DNA-directed RNA polymerase isoform 3 [Theobroma cacao]
            gi|508727714|gb|EOY19611.1| DNA-directed RNA polymerase
            isoform 3 [Theobroma cacao]
          Length = 1153

 Score = 1910 bits (4949), Expect = 0.0
 Identities = 947/1158 (81%), Positives = 1032/1158 (89%), Gaps = 4/1158 (0%)
 Frame = -2

Query: 3671 MGVKEEDSALLNDLQEQGLK---IDKQSLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSF 3501
            MG+K+ED  L N+     +    +DKQ LAAP+KSAVDKFQLLPEFLKVRGLVKQHLDSF
Sbjct: 1    MGLKQEDLLLNNNTNNSNVSEMPVDKQKLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSF 60

Query: 3500 NYFLRTQIKKIVRANDLITSRVDPSIYLRYKDVRIGEPSIIIDGVTEKLTPHKCRLADLT 3321
            NYF+ T IKKIVRAND I S VDPSIYLR+KDVRIGEPS+ I+ V+EK+ PH CRL+D+T
Sbjct: 61   NYFVNTGIKKIVRANDRIVSGVDPSIYLRFKDVRIGEPSMTINAVSEKINPHTCRLSDMT 120

Query: 3320 YAAPIYVNIEYITGSHGSKTTQMKRDVIIGRMPIMLRSCCCVLYGKDEEELARCGECPLD 3141
            YAAPI+VNIEYI GSHG KT   K D++IGRMPIMLRSCCCVLYGKDE ELAR GECPLD
Sbjct: 121  YAAPIFVNIEYIQGSHGQKTRLEKNDLVIGRMPIMLRSCCCVLYGKDEAELARLGECPLD 180

Query: 3140 PGGYFVIKGTEKVILIQEQLSKNRIIIDTDKKNCVQASVTSSTEATKSKTVIKMEKEKIY 2961
            PGGYFVIKG EK     EQLSKNRIIID DKK  + ASVTSS+EATKSKTVI+MEKEKIY
Sbjct: 181  PGGYFVIKGAEK-----EQLSKNRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIY 235

Query: 2960 LYLNQFTSKVPIMMVMKAMGMESDQEVVQMIGRDPRYSELLLPSIEDCAKEAVYTQYQAL 2781
            L LNQF  K+PIM+VMKAMGMESDQEVVQM+GRDP Y+ +LLPSIE+CA   +YTQ QAL
Sbjct: 236  LLLNQFVKKIPIMVVMKAMGMESDQEVVQMVGRDPHYNAVLLPSIEECAGVGIYTQEQAL 295

Query: 2780 EYLEQKVKKLPYSNALIEKEGRALGILRDIFLANILVQQDNFRPKCIYVAVMLRRMMEAI 2601
            EYLE KVK++ Y+    EKEGRAL ILRD+FLAN+ V+ +NFRPKC+YVAVMLRRM+EAI
Sbjct: 296  EYLETKVKRVMYTGPASEKEGRALSILRDVFLANVPVRSNNFRPKCLYVAVMLRRMVEAI 355

Query: 2600 LNKDAMDDKDYAGNKRXXXXXXXXXXXXXXXFKTMNDEARKTIDTILAKPSRSSRFDISQ 2421
            LNKDAMDDKDY GNKR               FKT   E +K ID +L+KPSRSS  D SQ
Sbjct: 356  LNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTTISEVQKMIDLVLSKPSRSSALDPSQ 415

Query: 2420 FI-VKDSITVGLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKVSPQFEKSR 2244
            F+  +++IT GLERTLSTGN+D+KRF+MHRKGMTQV+ARLS+IGTLG+MTKVSPQFEKSR
Sbjct: 416  FLRSRETITFGLERTLSTGNFDIKRFKMHRKGMTQVLARLSFIGTLGYMTKVSPQFEKSR 475

Query: 2243 KVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEAPLVSLCYSLGVEDL 2064
            KVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDE PL+SLCY LGVEDL
Sbjct: 476  KVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCYCLGVEDL 535

Query: 2063 ELLSGEELHMPNSYLIILNGLILGKHRRPQWFANAMRKLRRAGKIGEFVSIFVNEKQRCV 1884
            ELLSGEELH PNS+L+ILNGLILGKHRRPQ FA AMRKLRRAGK+GEFVS+FVNEKQRCV
Sbjct: 536  ELLSGEELHTPNSFLVILNGLILGKHRRPQHFAVAMRKLRRAGKVGEFVSVFVNEKQRCV 595

Query: 1883 YIASDGGRVCRPLVIADKGVPRIKEHHMKELRDGVRTFNSFLKDGLIEYLDVNEENNALI 1704
            YIASDGGRVCRPLVIADKGV RIKEHHMKEL DGVRTF+ FL+DGLIEYLDVNEENNALI
Sbjct: 596  YIASDGGRVCRPLVIADKGVSRIKEHHMKELLDGVRTFDDFLRDGLIEYLDVNEENNALI 655

Query: 1703 ALYEENAKEGTTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNELT 1524
            ALYE  A   TTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYN+L 
Sbjct: 656  ALYEGEATPETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLC 715

Query: 1523 RMDTLIYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLD 1344
            RMDTL+YLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLD
Sbjct: 716  RMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLD 775

Query: 1343 RGFGRCIVMKKMAAISQKYENGTSDRIIRPQREGYEAERMQILDDDGLAAPGEIIRPHDI 1164
            RGFGRCIVMK+ +A++QKYE G SDRI+RPQR G  +ERMQILDDDG+A PGEIIRP+DI
Sbjct: 776  RGFGRCIVMKRYSAVNQKYETGASDRILRPQRTGPGSERMQILDDDGIATPGEIIRPNDI 835

Query: 1163 YINKESPTITRGPVTSPMGLPDSAYKPSRQTYKGPEGETAVVDRVSLCSDKNSNLCIKFM 984
            YINKES   TRG   S   LPDSAY+P+RQTYKGPEGE+ VVDRV+LC+D+NSNL IKF+
Sbjct: 836  YINKESSIHTRGSRVSSESLPDSAYRPARQTYKGPEGESCVVDRVALCTDRNSNLSIKFL 895

Query: 983  IRHTRRPEVGDKFSSRHGQKGVCGTIVQQEDLPFSERGICPDLIMNPHGFPSRMTVGKMI 804
            IRHTRRPEVGDKFSSRHGQKGVCGTI+QQED PFSERGICPDLIMNPHGFPSRMTVGKMI
Sbjct: 896  IRHTRRPEVGDKFSSRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMI 955

Query: 803  ELLGSKAGVSSGRFHYGSAFGEPSGHADRVEAISETLVKHGFSYSGKDFIYSGITGEPLQ 624
            ELLG KAGVS GRFHYGSAFGEPSGHADRVEAISETL+KHGFSY+GKDFIYSGITG PLQ
Sbjct: 956  ELLGGKAGVSCGRFHYGSAFGEPSGHADRVEAISETLIKHGFSYNGKDFIYSGITGCPLQ 1015

Query: 623  AYIFMGPIYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYG 444
            AYIFMGPIYYQKLKHMVLDKMHARG+GPRVM+TRQPTEGR+RNGGLRVGEMERDCLIAYG
Sbjct: 1016 AYIFMGPIYYQKLKHMVLDKMHARGNGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYG 1075

Query: 443  ASMLIYERLMISSDPFEVQVCRKCGLLGYYNFKLKTANCSTCKNGDNISTMKLPYACKLL 264
            ASMLI+ERLMISSDPFEVQVCRKCGLLGYY+ KLKT  CS+CKNGDN+STMKLPYACKLL
Sbjct: 1076 ASMLIFERLMISSDPFEVQVCRKCGLLGYYSHKLKTGICSSCKNGDNVSTMKLPYACKLL 1135

Query: 263  FQELQAMNIVPRLKLTEA 210
             QELQ+MNIVPRLKL+EA
Sbjct: 1136 IQELQSMNIVPRLKLSEA 1153


>ref|XP_006494572.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like isoform
            X1 [Citrus sinensis] gi|568883651|ref|XP_006494573.1|
            PREDICTED: DNA-directed RNA polymerase III subunit
            RPC2-like isoform X2 [Citrus sinensis]
          Length = 1149

 Score = 1900 bits (4923), Expect = 0.0
 Identities = 933/1133 (82%), Positives = 1019/1133 (89%)
 Frame = -2

Query: 3608 DKQSLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFLRTQIKKIVRANDLITSRVDP 3429
            DKQ LAAPVKS VDKFQLLPEFLKVRGLVKQHLDSFNYF+ T I+KIVRAND I S +DP
Sbjct: 17   DKQKLAAPVKSVVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIRKIVRANDRIVSGIDP 76

Query: 3428 SIYLRYKDVRIGEPSIIIDGVTEKLTPHKCRLADLTYAAPIYVNIEYITGSHGSKTTQMK 3249
            SI+LR+KDVRIG+PS+ +DGV+EKL PH CRL+D+TYAAPI VNIEY+ GSH  KTT  K
Sbjct: 77   SIFLRFKDVRIGQPSMTVDGVSEKLNPHMCRLSDMTYAAPILVNIEYVQGSHTEKTTMEK 136

Query: 3248 RDVIIGRMPIMLRSCCCVLYGKDEEELARCGECPLDPGGYFVIKGTEKVILIQEQLSKNR 3069
             DV+IGR+PIMLRSC CVLYGKDE ELAR GECPLDPGGYF+IKGTEKV+LIQEQLSKNR
Sbjct: 137  NDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSKNR 196

Query: 3068 IIIDTDKKNCVQASVTSSTEATKSKTVIKMEKEKIYLYLNQFTSKVPIMMVMKAMGMESD 2889
            +IIDTDKK  + ASVTSSTE  KSKTVI+MEK K+YL LNQF  K+PIM+VMKAMG+ESD
Sbjct: 197  VIIDTDKKGNINASVTSSTETVKSKTVIQMEKGKMYLLLNQFVKKIPIMVVMKAMGIESD 256

Query: 2888 QEVVQMIGRDPRYSELLLPSIEDCAKEAVYTQYQALEYLEQKVKKLPYSNALIEKEGRAL 2709
            QEVVQM+GRDPRYS LLLPSIE+CA   +YTQ +ALEYLE KVK+  + +   ++EGRA 
Sbjct: 257  QEVVQMVGRDPRYSALLLPSIEECANLDIYTQEKALEYLEGKVKRSTFGSPPNDREGRAF 316

Query: 2708 GILRDIFLANILVQQDNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYAGNKRXXXXXXXX 2529
             ILRD+FLAN+ V  +NFRPKC YVAVMLRRM+EA+LNKDAMDDKDY GNKR        
Sbjct: 317  SILRDVFLANVPVHNNNFRPKCFYVAVMLRRMVEAMLNKDAMDDKDYVGNKRLELSGQLV 376

Query: 2528 XXXXXXXFKTMNDEARKTIDTILAKPSRSSRFDISQFIVKDSITVGLERTLSTGNWDVKR 2349
                   FKTM  E +KT+D IL+KPSRSSRFD+SQFIV+DSITVGLERTLSTGN+DVKR
Sbjct: 377  SLLFEDLFKTMISEVQKTVDIILSKPSRSSRFDLSQFIVRDSITVGLERTLSTGNFDVKR 436

Query: 2348 FRMHRKGMTQVVARLSYIGTLGHMTKVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 2169
            F+MHRKGMTQV+ARLS+IGTLGHMT+VSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE
Sbjct: 437  FKMHRKGMTQVLARLSFIGTLGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 496

Query: 2168 ACGLVKNLALMTHVTTDEDEAPLVSLCYSLGVEDLELLSGEELHMPNSYLIILNGLILGK 1989
            ACGLVKNLALMTHVTTDE+E PL+SLCY LGVEDLELLSGEELH PNS+L+I NGLILGK
Sbjct: 497  ACGLVKNLALMTHVTTDEEEGPLISLCYCLGVEDLELLSGEELHNPNSFLVIFNGLILGK 556

Query: 1988 HRRPQWFANAMRKLRRAGKIGEFVSIFVNEKQRCVYIASDGGRVCRPLVIADKGVPRIKE 1809
            HRRP+ FA+ MRKLRRAGKIGEFVS+FVNEKQRCVYIASDGGRVCRPLVIADKG+ RIKE
Sbjct: 557  HRRPKCFADVMRKLRRAGKIGEFVSVFVNEKQRCVYIASDGGRVCRPLVIADKGISRIKE 616

Query: 1808 HHMKELRDGVRTFNSFLKDGLIEYLDVNEENNALIALYEENAKEGTTHIEIEPFTILGVC 1629
            HHMKEL DGVR+F+ FL++GLIEYLDVNEENNALIALYE +A   TTHIEIEPFTILGV 
Sbjct: 617  HHMKELLDGVRSFDDFLREGLIEYLDVNEENNALIALYEGDATPDTTHIEIEPFTILGVI 676

Query: 1628 AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNELTRMDTLIYLLVYPQRPLLTTRTIELV 1449
            AGLIPYPHHNQSPRNTYQCAMGKQAMGNIA+N+L RMD+L+YLLVYPQRPLLTTRTIELV
Sbjct: 677  AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLCRMDSLLYLLVYPQRPLLTTRTIELV 736

Query: 1448 GYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKMAAISQKYENGTSD 1269
            GYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV+KK  AI+QKY N TSD
Sbjct: 737  GYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVVKKYTAINQKYANSTSD 796

Query: 1268 RIIRPQREGYEAERMQILDDDGLAAPGEIIRPHDIYINKESPTITRGPVTSPMGLPDSAY 1089
            RI+RP R G  AERMQILDDDGLAAPGEII+P+D+YINKESP  TRG + SP G  DS Y
Sbjct: 797  RILRPDRTGPGAERMQILDDDGLAAPGEIIKPNDVYINKESPLETRGSIMSPTGQTDSRY 856

Query: 1088 KPSRQTYKGPEGETAVVDRVSLCSDKNSNLCIKFMIRHTRRPEVGDKFSSRHGQKGVCGT 909
            + +RQTYKGP+GET VVDRV+LCSDKN +LCIKF+IRHTRRPE+GDKFSSRHGQKGVCGT
Sbjct: 857  RSARQTYKGPDGETCVVDRVALCSDKNGDLCIKFLIRHTRRPELGDKFSSRHGQKGVCGT 916

Query: 908  IVQQEDLPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSSGRFHYGSAFGEPSG 729
            IVQQED PFSERGICPDLIMNPHGFPSRMTVGKMIELLG KAGVS GRFHYGSAFGEPSG
Sbjct: 917  IVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEPSG 976

Query: 728  HADRVEAISETLVKHGFSYSGKDFIYSGITGEPLQAYIFMGPIYYQKLKHMVLDKMHARG 549
            HAD VE+ISETLVKHGFSY+GKD IYSGITG PLQAYIFMGPIYYQKLKHMVLDKMHARG
Sbjct: 977  HADTVESISETLVKHGFSYNGKDMIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHARG 1036

Query: 548  SGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCRKCG 369
            SGPRVM+TRQPTEGR+RNGGLRVGEMERDCLIAYGASMLI+ERLM+SSDPFEVQVCR CG
Sbjct: 1037 SGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMVSSDPFEVQVCRVCG 1096

Query: 368  LLGYYNFKLKTANCSTCKNGDNISTMKLPYACKLLFQELQAMNIVPRLKLTEA 210
            LLGYYN KLK   CSTCKNGDNIS+MKLPYACKLL QELQ+MNIVPRLKL EA
Sbjct: 1097 LLGYYNHKLKAGICSTCKNGDNISSMKLPYACKLLIQELQSMNIVPRLKLAEA 1149


>ref|XP_006432385.1| hypothetical protein CICLE_v10000078mg [Citrus clementina]
            gi|557534507|gb|ESR45625.1| hypothetical protein
            CICLE_v10000078mg [Citrus clementina]
          Length = 1149

 Score = 1899 bits (4920), Expect = 0.0
 Identities = 932/1133 (82%), Positives = 1019/1133 (89%)
 Frame = -2

Query: 3608 DKQSLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFLRTQIKKIVRANDLITSRVDP 3429
            DKQ LAAPVKS VDKFQLLPEFLKVRGLVKQHLDSFNYF+ T I+KIVRAND I S +DP
Sbjct: 17   DKQKLAAPVKSVVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIRKIVRANDRIVSGIDP 76

Query: 3428 SIYLRYKDVRIGEPSIIIDGVTEKLTPHKCRLADLTYAAPIYVNIEYITGSHGSKTTQMK 3249
            SI+LR+KDVRIG+PS+ +DGV+EKL PH CRL+D+TYAAPI VNIEY+ GSH  KTT  K
Sbjct: 77   SIFLRFKDVRIGQPSMTVDGVSEKLNPHMCRLSDMTYAAPILVNIEYVQGSHTEKTTMEK 136

Query: 3248 RDVIIGRMPIMLRSCCCVLYGKDEEELARCGECPLDPGGYFVIKGTEKVILIQEQLSKNR 3069
             DV+IGR+PIMLRSC CVLYGKDE ELAR GECPLDPGGYF+IKGTEKV+LIQEQLSKNR
Sbjct: 137  NDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSKNR 196

Query: 3068 IIIDTDKKNCVQASVTSSTEATKSKTVIKMEKEKIYLYLNQFTSKVPIMMVMKAMGMESD 2889
            +IIDTDKK  + ASVTSSTE  KSKTVI+MEK K+YL LNQF  K+PIM+VMKAMGMESD
Sbjct: 197  VIIDTDKKGNINASVTSSTETVKSKTVIQMEKGKMYLLLNQFVKKIPIMVVMKAMGMESD 256

Query: 2888 QEVVQMIGRDPRYSELLLPSIEDCAKEAVYTQYQALEYLEQKVKKLPYSNALIEKEGRAL 2709
            QEVVQM+GRDPRYS LLLPSIE+CA   +YTQ +ALEYLE KVK+  + +   ++EGRA 
Sbjct: 257  QEVVQMVGRDPRYSALLLPSIEECANLDIYTQEKALEYLEGKVKRSTFGSPPNDREGRAF 316

Query: 2708 GILRDIFLANILVQQDNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYAGNKRXXXXXXXX 2529
             ILRD+FLAN+ V  +NFRPKC YVAVMLRRM+EA+LNKDAMDDKDY GNKR        
Sbjct: 317  SILRDVFLANVPVHNNNFRPKCFYVAVMLRRMVEAMLNKDAMDDKDYVGNKRLELSGQLV 376

Query: 2528 XXXXXXXFKTMNDEARKTIDTILAKPSRSSRFDISQFIVKDSITVGLERTLSTGNWDVKR 2349
                   FKTM  E +KT+D IL+KPSRSSRFD+SQFIV+DSITVGLERTLSTGN+DVKR
Sbjct: 377  SLLFEDLFKTMISEVQKTVDIILSKPSRSSRFDLSQFIVRDSITVGLERTLSTGNFDVKR 436

Query: 2348 FRMHRKGMTQVVARLSYIGTLGHMTKVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 2169
            F+MHRKGMTQV+ARLS+IGTLGHMT+VSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE
Sbjct: 437  FKMHRKGMTQVLARLSFIGTLGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 496

Query: 2168 ACGLVKNLALMTHVTTDEDEAPLVSLCYSLGVEDLELLSGEELHMPNSYLIILNGLILGK 1989
            ACGLVKNLALMTHVTTDE+E PL+SLCY LGVEDLELLSGEELH PNS+L+I NGLILGK
Sbjct: 497  ACGLVKNLALMTHVTTDEEEGPLISLCYCLGVEDLELLSGEELHNPNSFLVIFNGLILGK 556

Query: 1988 HRRPQWFANAMRKLRRAGKIGEFVSIFVNEKQRCVYIASDGGRVCRPLVIADKGVPRIKE 1809
            HRRP+ FA+ MRKLRRAGKIGEFVS+FVNEKQRCVYIASDGGRVCRPLVIADKG+ RIKE
Sbjct: 557  HRRPKCFADVMRKLRRAGKIGEFVSVFVNEKQRCVYIASDGGRVCRPLVIADKGISRIKE 616

Query: 1808 HHMKELRDGVRTFNSFLKDGLIEYLDVNEENNALIALYEENAKEGTTHIEIEPFTILGVC 1629
            HHMKEL DGVR+F+ FL++GLIEYLDVNEENNALIALYE +A   TTHIEIEPFTILGV 
Sbjct: 617  HHMKELSDGVRSFDDFLREGLIEYLDVNEENNALIALYEGDATPDTTHIEIEPFTILGVI 676

Query: 1628 AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNELTRMDTLIYLLVYPQRPLLTTRTIELV 1449
            AGLIPYPHHNQSPRNTYQCAMGKQAMGNIA+N+L RMD+L+YLLVYPQRPLLTTRTIELV
Sbjct: 677  AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLCRMDSLLYLLVYPQRPLLTTRTIELV 736

Query: 1448 GYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKMAAISQKYENGTSD 1269
            GYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV+KK  AI+QKY N TSD
Sbjct: 737  GYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVVKKYTAINQKYANSTSD 796

Query: 1268 RIIRPQREGYEAERMQILDDDGLAAPGEIIRPHDIYINKESPTITRGPVTSPMGLPDSAY 1089
            RI+RP R G  +ERMQILDDDGLAAPGEII+P+D+YINKESP  TRG + SP G  DS Y
Sbjct: 797  RILRPDRTGPGSERMQILDDDGLAAPGEIIKPNDVYINKESPLETRGSIMSPTGQTDSRY 856

Query: 1088 KPSRQTYKGPEGETAVVDRVSLCSDKNSNLCIKFMIRHTRRPEVGDKFSSRHGQKGVCGT 909
            + +RQTYKGP+GET VVDRV+LCSDKN +LCIKF+IRHTRRPE+GDKFSSRHGQKGVCGT
Sbjct: 857  RSARQTYKGPDGETCVVDRVALCSDKNGDLCIKFLIRHTRRPELGDKFSSRHGQKGVCGT 916

Query: 908  IVQQEDLPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSSGRFHYGSAFGEPSG 729
            IVQQED PFSERGICPDLIMNPHGFPSRMTVGKMIELLG KAGVS GRFHYGSAFGEPSG
Sbjct: 917  IVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEPSG 976

Query: 728  HADRVEAISETLVKHGFSYSGKDFIYSGITGEPLQAYIFMGPIYYQKLKHMVLDKMHARG 549
            HAD VE+ISETLVKHGFSY+GKD IYSGITG PLQAYIFMGPIYYQKLKHMVLDKMHARG
Sbjct: 977  HADTVESISETLVKHGFSYNGKDMIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHARG 1036

Query: 548  SGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCRKCG 369
            SGPRVM+TRQPTEGR+RNGGLRVGEMERDCLIAYGASMLI+ERLM+SSDPFEVQVCR CG
Sbjct: 1037 SGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMVSSDPFEVQVCRVCG 1096

Query: 368  LLGYYNFKLKTANCSTCKNGDNISTMKLPYACKLLFQELQAMNIVPRLKLTEA 210
            LLGYYN KLK   CSTCKNG+NIS+MKLPYACKLL QELQ+MNIVPRLKL EA
Sbjct: 1097 LLGYYNHKLKAGICSTCKNGNNISSMKLPYACKLLIQELQSMNIVPRLKLAEA 1149


>ref|XP_010242622.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 isoform X2
            [Nelumbo nucifera]
          Length = 1140

 Score = 1878 bits (4864), Expect = 0.0
 Identities = 918/1134 (80%), Positives = 1016/1134 (89%)
 Frame = -2

Query: 3611 IDKQSLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFLRTQIKKIVRANDLITSRVD 3432
            +DKQ +A+PVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYF+   IKKIV AN+ IT+  D
Sbjct: 9    VDKQFIASPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNIGIKKIVEANNRITASSD 68

Query: 3431 PSIYLRYKDVRIGEPSIIIDGVTEKLTPHKCRLADLTYAAPIYVNIEYITGSHGSKTTQM 3252
            P+ YL+Y DV+IG PSI  D VT+ LTPH CRL+D+TYAAPI VNIEY+       T + 
Sbjct: 69   PNFYLKYTDVKIGTPSITADNVTDTLTPHICRLSDMTYAAPIMVNIEYVKKFCDQITIEK 128

Query: 3251 KRDVIIGRMPIMLRSCCCVLYGKDEEELARCGECPLDPGGYFVIKGTEKVILIQEQLSKN 3072
            K +V+IGRMPIMLRSCCCVLYGKDE ELAR GECPLDPGGYFV+KGTEKVILIQEQLSKN
Sbjct: 129  KENVVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFVVKGTEKVILIQEQLSKN 188

Query: 3071 RIIIDTDKKNCVQASVTSSTEATKSKTVIKMEKEKIYLYLNQFTSKVPIMMVMKAMGMES 2892
            RIIIDTDKK C+ ASVTSSTEATKSKT+I M+K KIYL LN F   +PIM+VMKAMGMES
Sbjct: 189  RIIIDTDKKGCLNASVTSSTEATKSKTIILMDKGKIYLRLNAFVKDIPIMVVMKAMGMES 248

Query: 2891 DQEVVQMIGRDPRYSELLLPSIEDCAKEAVYTQYQALEYLEQKVKKLPYSNALIEKEGRA 2712
            DQEVVQM+GRDP+Y  LLLPSI++CA   +YTQ QALE+LE+KVKK  +SN  +EKEGRA
Sbjct: 249  DQEVVQMVGRDPKYGALLLPSIQECAGHGIYTQQQALEFLEKKVKKFSFSNPALEKEGRA 308

Query: 2711 LGILRDIFLANILVQQDNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYAGNKRXXXXXXX 2532
            +  LR++F+AN+ V+Q+NFRPKCIYVAVM+RRMMEA LNKDAMDDKDY GNKR       
Sbjct: 309  MDTLRNVFIANVPVRQNNFRPKCIYVAVMMRRMMEAFLNKDAMDDKDYVGNKRLELSGQL 368

Query: 2531 XXXXXXXXFKTMNDEARKTIDTILAKPSRSSRFDISQFIVKDSITVGLERTLSTGNWDVK 2352
                    FKTMN EARK++D  LAK +RS   DI+++IVKDSIT GLER +STGNWD+K
Sbjct: 369  ISLLFEDLFKTMNSEARKSVDLQLAKVNRSVPVDIARYIVKDSITYGLERAISTGNWDLK 428

Query: 2351 RFRMHRKGMTQVVARLSYIGTLGHMTKVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 2172
            RFRMHRKGMTQV+ARLS+I TLGHMTK+SPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG
Sbjct: 429  RFRMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 488

Query: 2171 EACGLVKNLALMTHVTTDEDEAPLVSLCYSLGVEDLELLSGEELHMPNSYLIILNGLILG 1992
            EACGLVKNLALMTHVTTD++E PL+SLC+SLGVEDLELLS EE+H PNSYL+I NGLILG
Sbjct: 489  EACGLVKNLALMTHVTTDDEEGPLISLCHSLGVEDLELLSAEEIHTPNSYLVIFNGLILG 548

Query: 1991 KHRRPQWFANAMRKLRRAGKIGEFVSIFVNEKQRCVYIASDGGRVCRPLVIADKGVPRIK 1812
            KHR+P+ FANA+RKLRR+GKIGEFVS++VNE+QRCVYIASDGGRVCRPLVIADKGV RIK
Sbjct: 549  KHRQPKQFANALRKLRRSGKIGEFVSVYVNERQRCVYIASDGGRVCRPLVIADKGVSRIK 608

Query: 1811 EHHMKELRDGVRTFNSFLKDGLIEYLDVNEENNALIALYEENAKEGTTHIEIEPFTILGV 1632
            EHHMKEL DGVR+FN FL++GLIEYLDVNEENNALIALYE  A+  TTHIEIEPFTILGV
Sbjct: 609  EHHMKELMDGVRSFNDFLREGLIEYLDVNEENNALIALYEGEAEPETTHIEIEPFTILGV 668

Query: 1631 CAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNELTRMDTLIYLLVYPQRPLLTTRTIEL 1452
            CAGLIPYPHHNQSPRNTYQCAMGKQAMGN+AYN+L RMDTL+YLLVYPQRPLLTTRTIEL
Sbjct: 669  CAGLIPYPHHNQSPRNTYQCAMGKQAMGNVAYNQLCRMDTLLYLLVYPQRPLLTTRTIEL 728

Query: 1451 VGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKMAAISQKYENGTS 1272
            VGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKK++AI+Q+Y N TS
Sbjct: 729  VGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLSAINQRYPNDTS 788

Query: 1271 DRIIRPQREGYEAERMQILDDDGLAAPGEIIRPHDIYINKESPTITRGPVTSPMGLPDSA 1092
            DRIIRPQ+    AE+  ILD DG+AAPGEIIRPHDIYINKE+P  TR   TSP GLPDSA
Sbjct: 789  DRIIRPQKVRSNAEK--ILDADGIAAPGEIIRPHDIYINKETPVNTRDKFTSPTGLPDSA 846

Query: 1091 YKPSRQTYKGPEGETAVVDRVSLCSDKNSNLCIKFMIRHTRRPEVGDKFSSRHGQKGVCG 912
            YK +RQTYKGP+GETAVVDRV+LCSDK++NLCIKF+IRHTRRPEVGDKFSSRHGQKGVCG
Sbjct: 847  YKSTRQTYKGPQGETAVVDRVALCSDKDNNLCIKFLIRHTRRPEVGDKFSSRHGQKGVCG 906

Query: 911  TIVQQEDLPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSSGRFHYGSAFGEPS 732
            TI+QQED PFSERGICPDLIMNPHGFPSRMT+GKMIELLG KAGVS GRFHYGSAFGEPS
Sbjct: 907  TIIQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVSCGRFHYGSAFGEPS 966

Query: 731  GHADRVEAISETLVKHGFSYSGKDFIYSGITGEPLQAYIFMGPIYYQKLKHMVLDKMHAR 552
            GHAD+VEAISETLV+HGFSY+GKDFIYSGITG PLQAYIFMGPIYYQKLKHMVLDKMHAR
Sbjct: 967  GHADKVEAISETLVRHGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHAR 1026

Query: 551  GSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCRKC 372
              GPRVM+TRQPTEGRSR+GGLR+GEMERDCLIAYGASMLI+ERLM+SSDPFEVQVCR C
Sbjct: 1027 ARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIFERLMLSSDPFEVQVCRVC 1086

Query: 371  GLLGYYNFKLKTANCSTCKNGDNISTMKLPYACKLLFQELQAMNIVPRLKLTEA 210
            GLLGYYN KLKT  CSTCK+GD+IS MKLPYACKLLFQELQ+MN+VPRLKLTEA
Sbjct: 1087 GLLGYYNHKLKTGICSTCKSGDHISKMKLPYACKLLFQELQSMNVVPRLKLTEA 1140


>ref|XP_010242621.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 isoform X1
            [Nelumbo nucifera]
          Length = 1142

 Score = 1873 bits (4851), Expect = 0.0
 Identities = 918/1136 (80%), Positives = 1016/1136 (89%), Gaps = 2/1136 (0%)
 Frame = -2

Query: 3611 IDKQSLAAPVKSAVDKFQLLPEFLK--VRGLVKQHLDSFNYFLRTQIKKIVRANDLITSR 3438
            +DKQ +A+PVKSAVDKFQLLPEFLK  VRGLVKQHLDSFNYF+   IKKIV AN+ IT+ 
Sbjct: 9    VDKQFIASPVKSAVDKFQLLPEFLKLQVRGLVKQHLDSFNYFVNIGIKKIVEANNRITAS 68

Query: 3437 VDPSIYLRYKDVRIGEPSIIIDGVTEKLTPHKCRLADLTYAAPIYVNIEYITGSHGSKTT 3258
             DP+ YL+Y DV+IG PSI  D VT+ LTPH CRL+D+TYAAPI VNIEY+       T 
Sbjct: 69   SDPNFYLKYTDVKIGTPSITADNVTDTLTPHICRLSDMTYAAPIMVNIEYVKKFCDQITI 128

Query: 3257 QMKRDVIIGRMPIMLRSCCCVLYGKDEEELARCGECPLDPGGYFVIKGTEKVILIQEQLS 3078
            + K +V+IGRMPIMLRSCCCVLYGKDE ELAR GECPLDPGGYFV+KGTEKVILIQEQLS
Sbjct: 129  EKKENVVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFVVKGTEKVILIQEQLS 188

Query: 3077 KNRIIIDTDKKNCVQASVTSSTEATKSKTVIKMEKEKIYLYLNQFTSKVPIMMVMKAMGM 2898
            KNRIIIDTDKK C+ ASVTSSTEATKSKT+I M+K KIYL LN F   +PIM+VMKAMGM
Sbjct: 189  KNRIIIDTDKKGCLNASVTSSTEATKSKTIILMDKGKIYLRLNAFVKDIPIMVVMKAMGM 248

Query: 2897 ESDQEVVQMIGRDPRYSELLLPSIEDCAKEAVYTQYQALEYLEQKVKKLPYSNALIEKEG 2718
            ESDQEVVQM+GRDP+Y  LLLPSI++CA   +YTQ QALE+LE+KVKK  +SN  +EKEG
Sbjct: 249  ESDQEVVQMVGRDPKYGALLLPSIQECAGHGIYTQQQALEFLEKKVKKFSFSNPALEKEG 308

Query: 2717 RALGILRDIFLANILVQQDNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYAGNKRXXXXX 2538
            RA+  LR++F+AN+ V+Q+NFRPKCIYVAVM+RRMMEA LNKDAMDDKDY GNKR     
Sbjct: 309  RAMDTLRNVFIANVPVRQNNFRPKCIYVAVMMRRMMEAFLNKDAMDDKDYVGNKRLELSG 368

Query: 2537 XXXXXXXXXXFKTMNDEARKTIDTILAKPSRSSRFDISQFIVKDSITVGLERTLSTGNWD 2358
                      FKTMN EARK++D  LAK +RS   DI+++IVKDSIT GLER +STGNWD
Sbjct: 369  QLISLLFEDLFKTMNSEARKSVDLQLAKVNRSVPVDIARYIVKDSITYGLERAISTGNWD 428

Query: 2357 VKRFRMHRKGMTQVVARLSYIGTLGHMTKVSPQFEKSRKVSGPRALQPSQWGMLCPCDTP 2178
            +KRFRMHRKGMTQV+ARLS+I TLGHMTK+SPQFEKSRKVSGPRALQPSQWGMLCPCDTP
Sbjct: 429  LKRFRMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTP 488

Query: 2177 EGEACGLVKNLALMTHVTTDEDEAPLVSLCYSLGVEDLELLSGEELHMPNSYLIILNGLI 1998
            EGEACGLVKNLALMTHVTTD++E PL+SLC+SLGVEDLELLS EE+H PNSYL+I NGLI
Sbjct: 489  EGEACGLVKNLALMTHVTTDDEEGPLISLCHSLGVEDLELLSAEEIHTPNSYLVIFNGLI 548

Query: 1997 LGKHRRPQWFANAMRKLRRAGKIGEFVSIFVNEKQRCVYIASDGGRVCRPLVIADKGVPR 1818
            LGKHR+P+ FANA+RKLRR+GKIGEFVS++VNE+QRCVYIASDGGRVCRPLVIADKGV R
Sbjct: 549  LGKHRQPKQFANALRKLRRSGKIGEFVSVYVNERQRCVYIASDGGRVCRPLVIADKGVSR 608

Query: 1817 IKEHHMKELRDGVRTFNSFLKDGLIEYLDVNEENNALIALYEENAKEGTTHIEIEPFTIL 1638
            IKEHHMKEL DGVR+FN FL++GLIEYLDVNEENNALIALYE  A+  TTHIEIEPFTIL
Sbjct: 609  IKEHHMKELMDGVRSFNDFLREGLIEYLDVNEENNALIALYEGEAEPETTHIEIEPFTIL 668

Query: 1637 GVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNELTRMDTLIYLLVYPQRPLLTTRTI 1458
            GVCAGLIPYPHHNQSPRNTYQCAMGKQAMGN+AYN+L RMDTL+YLLVYPQRPLLTTRTI
Sbjct: 669  GVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNVAYNQLCRMDTLLYLLVYPQRPLLTTRTI 728

Query: 1457 ELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKMAAISQKYENG 1278
            ELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKK++AI+Q+Y N 
Sbjct: 729  ELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLSAINQRYPND 788

Query: 1277 TSDRIIRPQREGYEAERMQILDDDGLAAPGEIIRPHDIYINKESPTITRGPVTSPMGLPD 1098
            TSDRIIRPQ+    AE+  ILD DG+AAPGEIIRPHDIYINKE+P  TR   TSP GLPD
Sbjct: 789  TSDRIIRPQKVRSNAEK--ILDADGIAAPGEIIRPHDIYINKETPVNTRDKFTSPTGLPD 846

Query: 1097 SAYKPSRQTYKGPEGETAVVDRVSLCSDKNSNLCIKFMIRHTRRPEVGDKFSSRHGQKGV 918
            SAYK +RQTYKGP+GETAVVDRV+LCSDK++NLCIKF+IRHTRRPEVGDKFSSRHGQKGV
Sbjct: 847  SAYKSTRQTYKGPQGETAVVDRVALCSDKDNNLCIKFLIRHTRRPEVGDKFSSRHGQKGV 906

Query: 917  CGTIVQQEDLPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSSGRFHYGSAFGE 738
            CGTI+QQED PFSERGICPDLIMNPHGFPSRMT+GKMIELLG KAGVS GRFHYGSAFGE
Sbjct: 907  CGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVSCGRFHYGSAFGE 966

Query: 737  PSGHADRVEAISETLVKHGFSYSGKDFIYSGITGEPLQAYIFMGPIYYQKLKHMVLDKMH 558
            PSGHAD+VEAISETLV+HGFSY+GKDFIYSGITG PLQAYIFMGPIYYQKLKHMVLDKMH
Sbjct: 967  PSGHADKVEAISETLVRHGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMH 1026

Query: 557  ARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCR 378
            AR  GPRVM+TRQPTEGRSR+GGLR+GEMERDCLIAYGASMLI+ERLM+SSDPFEVQVCR
Sbjct: 1027 ARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIFERLMLSSDPFEVQVCR 1086

Query: 377  KCGLLGYYNFKLKTANCSTCKNGDNISTMKLPYACKLLFQELQAMNIVPRLKLTEA 210
             CGLLGYYN KLKT  CSTCK+GD+IS MKLPYACKLLFQELQ+MN+VPRLKLTEA
Sbjct: 1087 VCGLLGYYNHKLKTGICSTCKSGDHISKMKLPYACKLLFQELQSMNVVPRLKLTEA 1142


>ref|XP_012459628.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Gossypium
            raimondii] gi|763808128|gb|KJB75030.1| hypothetical
            protein B456_012G019600 [Gossypium raimondii]
          Length = 1158

 Score = 1871 bits (4847), Expect = 0.0
 Identities = 926/1157 (80%), Positives = 1024/1157 (88%), Gaps = 3/1157 (0%)
 Frame = -2

Query: 3671 MGVKEEDSALLN--DLQEQGLKIDKQSLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFN 3498
            MG+K+ED    N  +L    + +DKQ LAAP+KSAVDKFQLLPEFLKVRGLVKQHLDSFN
Sbjct: 1    MGLKQEDILNKNSKNLNVSEIPVDKQKLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFN 60

Query: 3497 YFLRTQIKKIVRANDLITSRVDPSIYLRYKDVRIGEPSIIIDGVTEKLTPHKCRLADLTY 3318
            YF+ T IKKIVRAND I S +DPSIYLR+KDVRIGEPS+ +DG+TEK+ PH CRL+++TY
Sbjct: 61   YFVNTGIKKIVRANDRIVSDIDPSIYLRFKDVRIGEPSMTVDGITEKINPHACRLSEMTY 120

Query: 3317 AAPIYVNIEYITGSHGSKTTQMKRDVIIGRMPIMLRSCCCVLYGKDEEELARCGECPLDP 3138
            AAPI VNIEYI GSHG KT   K D++IGRMPIMLRSCCCVL GKDE ELAR GECPLDP
Sbjct: 121  AAPILVNIEYIQGSHGQKTRLEKNDLVIGRMPIMLRSCCCVLQGKDEAELARLGECPLDP 180

Query: 3137 GGYFVIKGTEKVILIQEQLSKNRIIIDTDKKNCVQASVTSSTEATKSKTVIKMEKEKIYL 2958
            GGYFVIKGTEKVILIQEQLSKNRIIID DKK  + ASVTSS+EATKSKTVI+MEKEKIYL
Sbjct: 181  GGYFVIKGTEKVILIQEQLSKNRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIYL 240

Query: 2957 YLNQFTSKVPIMMVMKAMGMESDQEVVQMIGRDPRYSELLLPSIEDCAKEAVYTQYQALE 2778
             LNQF  K+PIM+VMKAMGMESDQEVVQM+GRDPR+S LLLPSIE+CA   +YT+ QAL 
Sbjct: 241  LLNQFVKKIPIMVVMKAMGMESDQEVVQMLGRDPRFSALLLPSIEECAGIGIYTKEQALA 300

Query: 2777 YLEQKVKKLPYSNALIEKEGRALGILRDIFLANILVQQDNFRPKCIYVAVMLRRMMEAIL 2598
            YL+ K K+  Y+++  +++GRA  ILRD+F+AN+ V+ +NFRPKC+YVAVMLRRMMEAIL
Sbjct: 301  YLDTKAKRPLYASSASDQDGRAFCILRDVFIANVPVRCNNFRPKCLYVAVMLRRMMEAIL 360

Query: 2597 NKDAMDDKDYAGNKRXXXXXXXXXXXXXXXFKTMNDEARKTIDTILAKPSRSSRFDISQF 2418
            NKDAMDDKDY GNKR               FKT   + +K+ID++L+K SRSS  D SQF
Sbjct: 361  NKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTTLAQVKKSIDSVLSKTSRSSALDPSQF 420

Query: 2417 IVK-DSITVGLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKVSPQFEKSRK 2241
            + + + IT GLERTLSTGN+D++RFRMHRKGMTQV+ARLS+IGTLG MTKVSPQFEKSRK
Sbjct: 421  LRRMEFITTGLERTLSTGNFDIQRFRMHRKGMTQVLARLSFIGTLGFMTKVSPQFEKSRK 480

Query: 2240 VSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEAPLVSLCYSLGVEDLE 2061
            VSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDE PLVSLCY LGVEDLE
Sbjct: 481  VSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLVSLCYCLGVEDLE 540

Query: 2060 LLSGEELHMPNSYLIILNGLILGKHRRPQWFANAMRKLRRAGKIGEFVSIFVNEKQRCVY 1881
            LLSGEELH PNS+L++LNGLILGKHRRPQ FANA+RKLRRAGK+GEFVS+FVNEKQRCVY
Sbjct: 541  LLSGEELHTPNSFLVMLNGLILGKHRRPQHFANALRKLRRAGKVGEFVSVFVNEKQRCVY 600

Query: 1880 IASDGGRVCRPLVIADKGVPRIKEHHMKELRDGVRTFNSFLKDGLIEYLDVNEENNALIA 1701
            IASDGGRVCRPLVIADKG+ RIKEHHMKEL DGVRTF+ FL DGLIEYLDVNEENNALIA
Sbjct: 601  IASDGGRVCRPLVIADKGISRIKEHHMKELLDGVRTFDDFLSDGLIEYLDVNEENNALIA 660

Query: 1700 LYEENAKEGTTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNELTR 1521
            LYE  A   TTHIEIEPFTILGV AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYN+L R
Sbjct: 661  LYEGEATPETTHIEIEPFTILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCR 720

Query: 1520 MDTLIYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDR 1341
            MDTL+YLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAV+SYSGYDIEDAIVMNKSSLDR
Sbjct: 721  MDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVISYSGYDIEDAIVMNKSSLDR 780

Query: 1340 GFGRCIVMKKMAAISQKYENGTSDRIIRPQREGYEAERMQILDDDGLAAPGEIIRPHDIY 1161
            GFGRCIVMKK + + QKYENG +DRI+RPQR G  +E+M ILDDDG+A+PGEIIRP+DI 
Sbjct: 781  GFGRCIVMKKSSNVIQKYENGATDRILRPQRTGPGSEKMLILDDDGIASPGEIIRPNDIL 840

Query: 1160 INKESPTITRGPVTSPMGLPDSAYKPSRQTYKGPEGETAVVDRVSLCSDKNSNLCIKFMI 981
            +NKE P  TRG   S   LPDSAYKP RQ+YKGPEGE+ V+DRVSL +D+N NL IKF+I
Sbjct: 841  LNKEVPIHTRGTRVSSDSLPDSAYKPVRQSYKGPEGESCVMDRVSLSTDRNGNLSIKFLI 900

Query: 980  RHTRRPEVGDKFSSRHGQKGVCGTIVQQEDLPFSERGICPDLIMNPHGFPSRMTVGKMIE 801
            RHTRRPE+GDKFSSRHGQKGVCG I+QQED PFSERGICPDLIMNPHGFPSRMTVGKMIE
Sbjct: 901  RHTRRPELGDKFSSRHGQKGVCGIIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIE 960

Query: 800  LLGSKAGVSSGRFHYGSAFGEPSGHADRVEAISETLVKHGFSYSGKDFIYSGITGEPLQA 621
            LLG KAGVS GRFHYGSAFGEPSGHAD+VE ISETLVKHGF Y+GKDFIYSGITG PLQA
Sbjct: 961  LLGGKAGVSCGRFHYGSAFGEPSGHADKVETISETLVKHGFCYNGKDFIYSGITGCPLQA 1020

Query: 620  YIFMGPIYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGA 441
            YIFMGPIYYQKLKHMVLDKMHARG+GPRVM+TRQPTEGR+R GGLRVGEMERDCLIAYGA
Sbjct: 1021 YIFMGPIYYQKLKHMVLDKMHARGNGPRVMLTRQPTEGRARKGGLRVGEMERDCLIAYGA 1080

Query: 440  SMLIYERLMISSDPFEVQVCRKCGLLGYYNFKLKTANCSTCKNGDNISTMKLPYACKLLF 261
            SMLI+ERLM+SSDPFEVQVCRKCGLLGYY+ KLKT  CS+CKNGD++STM+LPYACKLL 
Sbjct: 1081 SMLIFERLMVSSDPFEVQVCRKCGLLGYYSHKLKTGICSSCKNGDDVSTMQLPYACKLLI 1140

Query: 260  QELQAMNIVPRLKLTEA 210
            QELQ+MNIVPRLKL EA
Sbjct: 1141 QELQSMNIVPRLKLAEA 1157


>gb|KJB75029.1| hypothetical protein B456_012G019600 [Gossypium raimondii]
          Length = 1159

 Score = 1866 bits (4833), Expect = 0.0
 Identities = 925/1158 (79%), Positives = 1024/1158 (88%), Gaps = 4/1158 (0%)
 Frame = -2

Query: 3671 MGVKEEDSALLN--DLQEQGLKIDKQSLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFN 3498
            MG+K+ED    N  +L    + +DKQ LAAP+KSAVDKFQLLPEFLKVRGLVKQHLDSFN
Sbjct: 1    MGLKQEDILNKNSKNLNVSEIPVDKQKLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFN 60

Query: 3497 YFLRTQIKKIVRANDLITSRVDPSIYLRYKDVRIGEPSIIIDGVTEKLTPHKCRLADLTY 3318
            YF+ T IKKIVRAND I S +DPSIYLR+KDVRIGEPS+ +DG+TEK+ PH CRL+++TY
Sbjct: 61   YFVNTGIKKIVRANDRIVSDIDPSIYLRFKDVRIGEPSMTVDGITEKINPHACRLSEMTY 120

Query: 3317 AAPIYVNIEYITGSHGSKTTQMKRDVIIGRMPIMLRSCCCVLYGKDEEELARCGECPLDP 3138
            AAPI VNIEYI GSHG KT   K D++IGRMPIMLRSCCCVL GKDE ELAR GECPLDP
Sbjct: 121  AAPILVNIEYIQGSHGQKTRLEKNDLVIGRMPIMLRSCCCVLQGKDEAELARLGECPLDP 180

Query: 3137 GGYFVIKGTEKVILIQEQLSKNRIIIDTDKKNCVQASVTSSTEATKSKTVIKMEKEKIYL 2958
            GGYFVIKGTEKVILIQEQLSKNRIIID DKK  + ASVTSS+EATKSKTVI+MEKEKIYL
Sbjct: 181  GGYFVIKGTEKVILIQEQLSKNRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIYL 240

Query: 2957 YLNQFTSKVPIMMVMKAMGMESDQEVVQMIGRDPRYSELLLPSIEDCAKEAVYTQYQALE 2778
             LNQF  K+PIM+VMKAMGMESDQEVVQM+GRDPR+S LLLPSIE+CA   +YT+ QAL 
Sbjct: 241  LLNQFVKKIPIMVVMKAMGMESDQEVVQMLGRDPRFSALLLPSIEECAGIGIYTKEQALA 300

Query: 2777 YLEQKVKKLPYSNALIEKEGRALGILRDIFLANILVQQDNFRPKCIYVAVMLRRMMEAIL 2598
            YL+ K K+  Y+++  +++GRA  ILRD+F+AN+ V+ +NFRPKC+YVAVMLRRMMEAIL
Sbjct: 301  YLDTKAKRPLYASSASDQDGRAFCILRDVFIANVPVRCNNFRPKCLYVAVMLRRMMEAIL 360

Query: 2597 NKDAMDDKDYAGNKRXXXXXXXXXXXXXXXFKTMNDEARKTIDTILAKPSRSSRFDISQF 2418
            NKDAMDDKDY GNKR               FKT   + +K+ID++L+K SRSS  D SQF
Sbjct: 361  NKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTTLAQVKKSIDSVLSKTSRSSALDPSQF 420

Query: 2417 IVK-DSITVGLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKVSPQFEKSRK 2241
            + + + IT GLERTLSTGN+D++RFRMHRKGMTQV+ARLS+IGTLG MTKVSPQFEKSRK
Sbjct: 421  LRRMEFITTGLERTLSTGNFDIQRFRMHRKGMTQVLARLSFIGTLGFMTKVSPQFEKSRK 480

Query: 2240 VSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEAPLVSLCYSLGVEDLE 2061
            VSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDE PLVSLCY LGVEDLE
Sbjct: 481  VSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLVSLCYCLGVEDLE 540

Query: 2060 LLSGEELHMPNSYLIILNGLILGKHRRPQWFANAMRKLRRAGKIGEFVSIFVNEKQRCVY 1881
            LLSGEELH PNS+L++LNGLILGKHRRPQ FANA+RKLRRAGK+GEFVS+FVNEKQRCVY
Sbjct: 541  LLSGEELHTPNSFLVMLNGLILGKHRRPQHFANALRKLRRAGKVGEFVSVFVNEKQRCVY 600

Query: 1880 IASDGGRVCRPLVIADKGVPRIKEHHMKELRDGVRTFNSFLKDGLIEYLDVNEENNALIA 1701
            IASDGGRVCRPLVIADKG+ RIKEHHMKEL DGVRTF+ FL DGLIEYLDVNEENNALIA
Sbjct: 601  IASDGGRVCRPLVIADKGISRIKEHHMKELLDGVRTFDDFLSDGLIEYLDVNEENNALIA 660

Query: 1700 LYEENAKEGTTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNELTR 1521
            LYE  A   TTHIEIEPFTILGV AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYN+L R
Sbjct: 661  LYEGEATPETTHIEIEPFTILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCR 720

Query: 1520 MDTLIYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDR 1341
            MDTL+YLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAV+SYSGYDIEDAIVMNKSSLDR
Sbjct: 721  MDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVISYSGYDIEDAIVMNKSSLDR 780

Query: 1340 GFGRCIVMKKMAA-ISQKYENGTSDRIIRPQREGYEAERMQILDDDGLAAPGEIIRPHDI 1164
            GFGRCIVMK  ++ + QKYENG +DRI+RPQR G  +E+M ILDDDG+A+PGEIIRP+DI
Sbjct: 781  GFGRCIVMKNRSSNVIQKYENGATDRILRPQRTGPGSEKMLILDDDGIASPGEIIRPNDI 840

Query: 1163 YINKESPTITRGPVTSPMGLPDSAYKPSRQTYKGPEGETAVVDRVSLCSDKNSNLCIKFM 984
             +NKE P  TRG   S   LPDSAYKP RQ+YKGPEGE+ V+DRVSL +D+N NL IKF+
Sbjct: 841  LLNKEVPIHTRGTRVSSDSLPDSAYKPVRQSYKGPEGESCVMDRVSLSTDRNGNLSIKFL 900

Query: 983  IRHTRRPEVGDKFSSRHGQKGVCGTIVQQEDLPFSERGICPDLIMNPHGFPSRMTVGKMI 804
            IRHTRRPE+GDKFSSRHGQKGVCG I+QQED PFSERGICPDLIMNPHGFPSRMTVGKMI
Sbjct: 901  IRHTRRPELGDKFSSRHGQKGVCGIIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMI 960

Query: 803  ELLGSKAGVSSGRFHYGSAFGEPSGHADRVEAISETLVKHGFSYSGKDFIYSGITGEPLQ 624
            ELLG KAGVS GRFHYGSAFGEPSGHAD+VE ISETLVKHGF Y+GKDFIYSGITG PLQ
Sbjct: 961  ELLGGKAGVSCGRFHYGSAFGEPSGHADKVETISETLVKHGFCYNGKDFIYSGITGCPLQ 1020

Query: 623  AYIFMGPIYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYG 444
            AYIFMGPIYYQKLKHMVLDKMHARG+GPRVM+TRQPTEGR+R GGLRVGEMERDCLIAYG
Sbjct: 1021 AYIFMGPIYYQKLKHMVLDKMHARGNGPRVMLTRQPTEGRARKGGLRVGEMERDCLIAYG 1080

Query: 443  ASMLIYERLMISSDPFEVQVCRKCGLLGYYNFKLKTANCSTCKNGDNISTMKLPYACKLL 264
            ASMLI+ERLM+SSDPFEVQVCRKCGLLGYY+ KLKT  CS+CKNGD++STM+LPYACKLL
Sbjct: 1081 ASMLIFERLMVSSDPFEVQVCRKCGLLGYYSHKLKTGICSSCKNGDDVSTMQLPYACKLL 1140

Query: 263  FQELQAMNIVPRLKLTEA 210
             QELQ+MNIVPRLKL EA
Sbjct: 1141 IQELQSMNIVPRLKLAEA 1158


>ref|XP_010043725.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2 [Eucalyptus
            grandis]
          Length = 1152

 Score = 1857 bits (4810), Expect = 0.0
 Identities = 919/1144 (80%), Positives = 1009/1144 (88%), Gaps = 10/1144 (0%)
 Frame = -2

Query: 3611 IDKQSLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFLRTQIKKIVRANDLITSRVD 3432
            +D + LAAP+KSAVDKFQL+PEFLKVRGLVKQHLDSFNYF  T+IKKIVRAND I S VD
Sbjct: 12   VDYRKLAAPIKSAVDKFQLVPEFLKVRGLVKQHLDSFNYFANTEIKKIVRANDKIVSSVD 71

Query: 3431 PSIYLRYKDVRIGEPSIIIDGVTEKLTPHKCRLADLTYAAPIYVNIEYITGSHGSKTTQM 3252
            P++Y+R+KDVRIG P+  ++G+ E L+P KCRL D TYAAP+ V++EY  GSHG  +   
Sbjct: 72   PNLYVRFKDVRIGNPTEALEGIVEDLSPQKCRLTDKTYAAPVLVDVEYTKGSHGGYSLLE 131

Query: 3251 KRDVIIGRMPIMLRSCCCVLYGKDEEELARCGECPLDPGGYFVIKGTEKVILIQEQLSKN 3072
            K DV I RMPIMLRSCCCVL+ KDE+ELAR GECPLDPGGYFVIKGTEKVILIQEQLSKN
Sbjct: 132  KNDVTIARMPIMLRSCCCVLFRKDEDELARLGECPLDPGGYFVIKGTEKVILIQEQLSKN 191

Query: 3071 RIIIDTDKKNCVQASVTSSTEATKSKTVIKMEKEKIYLYLNQFTSKVPIMMVMKAMGMES 2892
            RIIIDTDKK  + ASVTSSTEATKSKTV+ MEK K+YL LNQF   +PIM+VMKAM MES
Sbjct: 192  RIIIDTDKKGNINASVTSSTEATKSKTVVVMEKGKMYLQLNQFAKNIPIMIVMKAMRMES 251

Query: 2891 DQEVVQMIGRDPRYSELLLPSIEDCAKEAVYTQYQALEYLEQKVKKLPYSNALIEKEGRA 2712
            DQEVVQMIGRDPRYS LLL SIE+CA  +++TQ QALE+LE K+KKLPY+N    KEGRA
Sbjct: 252  DQEVVQMIGRDPRYSALLLQSIEECASLSIFTQQQALEFLEGKLKKLPYANMSTGKEGRA 311

Query: 2711 LGILRDIFLANILVQQDNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYAGNKRXXXXXXX 2532
            + ILRD+FLAN+ V ++NFRPKCIYVAVMLRRMMEAILNKDAMDDKDY GNKR       
Sbjct: 312  MSILRDVFLANVRVIKNNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRLELSGQL 371

Query: 2531 XXXXXXXXFKTMNDEARKTIDTILAKPSRSSRFDISQFIVKDSITVGLERTLSTGNWDVK 2352
                    FKTM  E +K  D +L+K SRSS+ D+S  +VKD IT GLER LSTGNWDVK
Sbjct: 372  ISLLFEDLFKTMISEVQKQADNVLSKRSRSSQLDLSMLLVKDIITQGLERALSTGNWDVK 431

Query: 2351 RFRMHRKGMTQVVARLSYIGTLGHMTKVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 2172
            RFRMHRKGMTQV+ARLS+IGTLGH+T++SPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG
Sbjct: 432  RFRMHRKGMTQVLARLSFIGTLGHVTRISPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 491

Query: 2171 EACGLVKNLALMTHVTTDEDEAPLVSLCYSLGVEDLELLSGEELHMPNSYLIILNGLILG 1992
            EACGLVKNLALMTHVTTD++E PL++LCY LGVEDLELLSGEELH PNS+LII NGLILG
Sbjct: 492  EACGLVKNLALMTHVTTDQEEGPLIALCYCLGVEDLELLSGEELHTPNSFLIIFNGLILG 551

Query: 1991 KHRRPQWFANAMRKLRRAGKIGEFVSIFVNEKQRCVYIASDGGRVCRPLVIADKGVPRIK 1812
            KHRRPQ FAN MRKLRR G+IGEFVS+FVNEKQ CVYIASDGGRVCRPLVIADKG+ RIK
Sbjct: 552  KHRRPQRFANTMRKLRRIGRIGEFVSVFVNEKQCCVYIASDGGRVCRPLVIADKGISRIK 611

Query: 1811 EHHMKELRDGVRTFNSFLKDGLIEYLDVNEENNALIALYEENAKEGTTHIEIEPFTILGV 1632
            EHHMK L DG RTF+ FL++GL+EYLDVNEENNALIALYE++A   TTHIEIEPFTILGV
Sbjct: 612  EHHMKGLLDGARTFDDFLREGLVEYLDVNEENNALIALYEQDATPETTHIEIEPFTILGV 671

Query: 1631 CAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNELTRMDTLIYLLVYPQRPLLTTRTIEL 1452
            CAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYN+L RMDTL+YLLVYPQRPLLTTRTIEL
Sbjct: 672  CAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLLRMDTLLYLLVYPQRPLLTTRTIEL 731

Query: 1451 VGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKMAAISQKYENGTS 1272
             GYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKK +A++QKYENGTS
Sbjct: 732  TGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKYSAVNQKYENGTS 791

Query: 1271 DRIIRPQR--------EGYEAERMQILDDDGLAAPGEIIRPHDIYINKESPTITRGPVTS 1116
            DRI+RP R        E  + ERMQILD+DG+AAPGEIIRP+D+YINKESP IT+G   +
Sbjct: 792  DRILRPPRKDDRNKKGENPDWERMQILDNDGIAAPGEIIRPNDVYINKESPIITKG---N 848

Query: 1115 PM--GLPDSAYKPSRQTYKGPEGETAVVDRVSLCSDKNSNLCIKFMIRHTRRPEVGDKFS 942
            P   GL DS YKPSRQT+KG EGE+ VVDRV+L SDKN NL IKFMIRHTRRPEVGDKFS
Sbjct: 849  PKLGGLKDSDYKPSRQTFKGAEGESCVVDRVTLSSDKNYNLSIKFMIRHTRRPEVGDKFS 908

Query: 941  SRHGQKGVCGTIVQQEDLPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSSGRF 762
            SRHGQKGVCGTIVQQED PFSE GICPDLIMNPHGFPSRMTVGKMIELLG KAGVS GRF
Sbjct: 909  SRHGQKGVCGTIVQQEDFPFSEHGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRF 968

Query: 761  HYGSAFGEPSGHADRVEAISETLVKHGFSYSGKDFIYSGITGEPLQAYIFMGPIYYQKLK 582
            HYGSAFGEPSGHADRVEAISETLVKHGFSY+GKDF+YSGITG PLQAYIFMGPIYYQKLK
Sbjct: 969  HYGSAFGEPSGHADRVEAISETLVKHGFSYNGKDFLYSGITGCPLQAYIFMGPIYYQKLK 1028

Query: 581  HMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSD 402
            HMVLDKMHARGSGPRVM+TRQPTEGR+RNGGLRVGEMERDCLIAYGASMLIYERLM+SSD
Sbjct: 1029 HMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYERLMLSSD 1088

Query: 401  PFEVQVCRKCGLLGYYNFKLKTANCSTCKNGDNISTMKLPYACKLLFQELQAMNIVPRLK 222
            PFEVQVCR CGLLGYYN+KLKT  CS+CKNGDNISTMKLPYACKLL QELQ+MNIVPRL+
Sbjct: 1089 PFEVQVCRACGLLGYYNYKLKTGICSSCKNGDNISTMKLPYACKLLIQELQSMNIVPRLR 1148

Query: 221  LTEA 210
            L ++
Sbjct: 1149 LADS 1152


>ref|XP_011003287.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 isoform X2
            [Populus euphratica]
          Length = 1150

 Score = 1853 bits (4800), Expect = 0.0
 Identities = 914/1135 (80%), Positives = 1002/1135 (88%), Gaps = 1/1135 (0%)
 Frame = -2

Query: 3611 IDKQS-LAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFLRTQIKKIVRANDLITSRV 3435
            IDKQ   AAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYF+   IKKIVRAND I S V
Sbjct: 19   IDKQKHAAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFINIGIKKIVRANDRIVSTV 78

Query: 3434 DPSIYLRYKDVRIGEPSIIIDGVTEKLTPHKCRLADLTYAAPIYVNIEYITGSHGSKTTQ 3255
            DPS+YLR+ DV+IG+PS+++D ++E++TPH CRL+D TYAAPI+VNIEYI+GSHG K   
Sbjct: 79   DPSLYLRFTDVKIGKPSMVVDAISEQITPHMCRLSDTTYAAPIWVNIEYISGSHGRKEKM 138

Query: 3254 MKRDVIIGRMPIMLRSCCCVLYGKDEEELARCGECPLDPGGYFVIKGTEKVILIQEQLSK 3075
            +K DV+IGRMPIMLRSCCCVL GK+E ELAR GECPLDPGGYFV+KGTEKVILIQEQLSK
Sbjct: 139  IKNDVVIGRMPIMLRSCCCVLSGKNEAELARLGECPLDPGGYFVVKGTEKVILIQEQLSK 198

Query: 3074 NRIIIDTDKKNCVQASVTSSTEATKSKTVIKMEKEKIYLYLNQFTSKVPIMMVMKAMGME 2895
            NRIIID DKK  + ASVTSSTEATKSKTVI MEKEK+YL LNQF  K+PIM+VMKAMGME
Sbjct: 199  NRIIIDNDKKGNINASVTSSTEATKSKTVILMEKEKMYLCLNQFAKKIPIMVVMKAMGME 258

Query: 2894 SDQEVVQMIGRDPRYSELLLPSIEDCAKEAVYTQYQALEYLEQKVKKLPYSNALIEKEGR 2715
            SDQEVVQM+GRDPRYS LLLPSIE+CA   VYT+ QALEYLE  VK+  YS++  EKE R
Sbjct: 259  SDQEVVQMVGRDPRYSALLLPSIEECASHGVYTREQALEYLEAMVKRSTYSSSSTEKENR 318

Query: 2714 ALGILRDIFLANILVQQDNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYAGNKRXXXXXX 2535
            AL ILRD+F+AN+ V+++NFRPKCIYVAVMLRRMMEA+LNKDAMDDKDY GNKR      
Sbjct: 319  ALAILRDVFIANVPVRKNNFRPKCIYVAVMLRRMMEALLNKDAMDDKDYVGNKRLELSGQ 378

Query: 2534 XXXXXXXXXFKTMNDEARKTIDTILAKPSRSSRFDISQFIVKDSITVGLERTLSTGNWDV 2355
                     FKTM  E +K  D +L K +RSSRFD SQ+IV+DSIT GLER LSTGNWDV
Sbjct: 379  LISLLFEDLFKTMITEVQKIADALLVKQNRSSRFDFSQYIVRDSITNGLERALSTGNWDV 438

Query: 2354 KRFRMHRKGMTQVVARLSYIGTLGHMTKVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPE 2175
            KRFRM+RKG+TQV+ RLSY+ +LGHMT++SPQFEKSRKVSGPRALQPSQWGMLCPCDTPE
Sbjct: 439  KRFRMNRKGVTQVLVRLSYMASLGHMTRISPQFEKSRKVSGPRALQPSQWGMLCPCDTPE 498

Query: 2174 GEACGLVKNLALMTHVTTDEDEAPLVSLCYSLGVEDLELLSGEELHMPNSYLIILNGLIL 1995
            GEACGLVKNLALMTHVTTDE+E+PL+SLC  LGVEDLELLSGEELH PNS+L+I NGLIL
Sbjct: 499  GEACGLVKNLALMTHVTTDEEESPLISLCKCLGVEDLELLSGEELHTPNSFLVIFNGLIL 558

Query: 1994 GKHRRPQWFANAMRKLRRAGKIGEFVSIFVNEKQRCVYIASDGGRVCRPLVIADKGVPRI 1815
            GKHRRP  FANAMRKLRRAGKIGEFVS+FVNEKQR VYIASDGGRVCRPLVIADKGV RI
Sbjct: 559  GKHRRPHQFANAMRKLRRAGKIGEFVSVFVNEKQRAVYIASDGGRVCRPLVIADKGVSRI 618

Query: 1814 KEHHMKELRDGVRTFNSFLKDGLIEYLDVNEENNALIALYEENAKEGTTHIEIEPFTILG 1635
            KEHHM+EL DG RTF+ FL +GLIEYLDVNEENNALIALYE  A   TTHIEIEPFTILG
Sbjct: 619  KEHHMRELMDGARTFDDFLHEGLIEYLDVNEENNALIALYEWEATPETTHIEIEPFTILG 678

Query: 1634 VCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNELTRMDTLIYLLVYPQRPLLTTRTIE 1455
            V AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYN+L RMD+L+YLLVYPQRPLLTTRTIE
Sbjct: 679  VVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLGRMDSLLYLLVYPQRPLLTTRTIE 738

Query: 1454 LVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKMAAISQKYENGT 1275
            LVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIV+KK    +QKYENG 
Sbjct: 739  LVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVLKKYTCTNQKYENGA 798

Query: 1274 SDRIIRPQREGYEAERMQILDDDGLAAPGEIIRPHDIYINKESPTITRGPVTSPMGLPDS 1095
            SDRI+RP++     ER ++LDDDGLAAPGEIIR  DIYINKESP  TRGP+ S   L D 
Sbjct: 799  SDRILRPRK---NEERERVLDDDGLAAPGEIIRHGDIYINKESPIETRGPLKSAAALADV 855

Query: 1094 AYKPSRQTYKGPEGETAVVDRVSLCSDKNSNLCIKFMIRHTRRPEVGDKFSSRHGQKGVC 915
             Y+P  Q +KG EGE+ VVDRV+LCSDKN+NLCIK+ IRHTRRPEVGDKFSSRHGQKGVC
Sbjct: 856  KYRPCAQIFKGTEGESCVVDRVALCSDKNNNLCIKYKIRHTRRPEVGDKFSSRHGQKGVC 915

Query: 914  GTIVQQEDLPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSSGRFHYGSAFGEP 735
            GTI+QQED PFSERGICPDLIMNPHGFPSRMTVGKMIELLG KAGVS GRFHYGSAFGEP
Sbjct: 916  GTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEP 975

Query: 734  SGHADRVEAISETLVKHGFSYSGKDFIYSGITGEPLQAYIFMGPIYYQKLKHMVLDKMHA 555
            SGHADRVEAISETLVKHGFSY+GKDFIYSGITG PLQAYIFMGPIYYQKLKHMVLDKMHA
Sbjct: 976  SGHADRVEAISETLVKHGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHA 1035

Query: 554  RGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCRK 375
            RGSGPRVM+TRQPT+GR+RNGGLRVGEME+DCL+AYG SML+YERLM+SSD FE QVCR 
Sbjct: 1036 RGSGPRVMLTRQPTDGRARNGGLRVGEMEKDCLVAYGTSMLLYERLMVSSDQFEAQVCRA 1095

Query: 374  CGLLGYYNFKLKTANCSTCKNGDNISTMKLPYACKLLFQELQAMNIVPRLKLTEA 210
            CGLLGYYN KLK A C+TCKNGD +STMKLPYACKLL QELQ+MNIVPRL+L EA
Sbjct: 1096 CGLLGYYNQKLKAAMCTTCKNGDKVSTMKLPYACKLLIQELQSMNIVPRLRLAEA 1150


>ref|XP_004141655.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Cucumis
            sativus]
          Length = 1158

 Score = 1851 bits (4794), Expect = 0.0
 Identities = 917/1136 (80%), Positives = 1006/1136 (88%), Gaps = 2/1136 (0%)
 Frame = -2

Query: 3611 IDKQSLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFLRTQIKKIVRANDLITSRVD 3432
            IDKQ +  P+KSAVDKFQLLPEFLKVRGLVKQHLDSFNYF+ T+IKKIV+AND I S  D
Sbjct: 26   IDKQFIGLPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTEIKKIVKANDRIESSTD 85

Query: 3431 PSIYLRYKDVRIGEPSIIIDGVTEKLTPHKCRLADLTYAAPIYVNIEYITGSHGSKTTQM 3252
            PSIYLR+ DVRIGEPS+ ++ V+E + PH CRL+DLTYAAPI V+IEYI  SH  K  + 
Sbjct: 86   PSIYLRFLDVRIGEPSVTVNAVSETINPHMCRLSDLTYAAPILVDIEYIEESHAQKAPRE 145

Query: 3251 KRDVIIGRMPIMLRSCCCVLYGKDEEELARCGECPLDPGGYFVIKGTEKVILIQEQLSKN 3072
            K+DV+IGRMPIMLRS CCVL+GKDE ELAR GECPLDPGGYF+IKGTEKV+LIQEQLSKN
Sbjct: 146  KKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECPLDPGGYFIIKGTEKVVLIQEQLSKN 205

Query: 3071 RIIIDTDKKNCVQASVTSSTEATKSKTVIKMEKEKIYLYLNQFTS-KVPIMMVMKAMGME 2895
            RIIIDTDKK  + ASVTSSTEATKSKTVIKME EKIYL LN FT+ K+PIM+V+KAMGME
Sbjct: 206  RIIIDTDKKGNINASVTSSTEATKSKTVIKMENEKIYLQLNIFTTPKIPIMVVLKAMGME 265

Query: 2894 SDQEVVQMIGRDPRYSELLLPSIEDCAKEAVYTQYQALEYLEQKVKKLPYSNALIEKEGR 2715
            S QEVVQM+GRDPRY  LLLPSIE+CAKE +YTQ QALEYLE KVKK  +++A  EKEGR
Sbjct: 266  SIQEVVQMVGRDPRYGALLLPSIEECAKEKIYTQEQALEYLETKVKKFQFASAPPEKEGR 325

Query: 2714 ALGILRDIFLANILVQQDNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYAGNKRXXXXXX 2535
            ALGILRD+FLAN+ V ++NF PKCIYVAVM+RRMM+AIL+KDAMDDKDY GNKR      
Sbjct: 326  ALGILRDVFLANVPVYKNNFHPKCIYVAVMMRRMMDAILSKDAMDDKDYVGNKRLELSGQ 385

Query: 2534 XXXXXXXXXFKTMNDEARKTIDTILAKPSRSSRFDISQFIVKDSITVGLERTLSTGNWDV 2355
                     FKTM  E +KTID +L K SRSSRFD SQ +  + I+ GLERTLSTGNWDV
Sbjct: 386  LISLLFEDLFKTMVSEVKKTIDKLLGKHSRSSRFDFSQHLNSNIISFGLERTLSTGNWDV 445

Query: 2354 KRFRMHRKGMTQVVARLSYIGTLGHMTKVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPE 2175
            KRFRMHRKGM+QV+ARLS+I T+GH+T+VSPQFEKSRKVSGPRALQPSQWGMLCPCDTPE
Sbjct: 446  KRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPE 505

Query: 2174 GEACGLVKNLALMTHVTTDEDEAPLVSLCYSLGVEDLELLSGEELHMPNSYLIILNGLIL 1995
            GEACGLVKNLALMTHVTTD++E PL+SLCY LGVEDLELLS EELH PNS+L+I NG IL
Sbjct: 506  GEACGLVKNLALMTHVTTDQEEGPLISLCYCLGVEDLELLSAEELHTPNSFLVIFNGRIL 565

Query: 1994 GKHRRPQWFANAMRKLRRAGKIGEFVSIFVNEKQRCVYIASDGGRVCRPLVIADKGVPRI 1815
            GKHRRPQ+FA  MR LRRAGKIGEFVS+FVNEKQ CVYIASDGGRVCRPLVIADKGV RI
Sbjct: 566  GKHRRPQYFATGMRMLRRAGKIGEFVSVFVNEKQHCVYIASDGGRVCRPLVIADKGVSRI 625

Query: 1814 KEHHMKELRDGVRTFNSFLKDGLIEYLDVNEENNALIALYEENAKEGTTHIEIEPFTILG 1635
            KE+HMKEL DGVRTF+ FL+DGLIEYLDVNEENNALIALYE  A   TTHIEIEPFTILG
Sbjct: 626  KEYHMKELSDGVRTFDDFLRDGLIEYLDVNEENNALIALYEGEATPETTHIEIEPFTILG 685

Query: 1634 VCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNELTRMDTLIYLLVYPQRPLLTTRTIE 1455
            V AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYN+L RMDTL+YLLVYPQRPLLTT+TIE
Sbjct: 686  VVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDTLLYLLVYPQRPLLTTKTIE 745

Query: 1454 LVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKMAAISQKYENGT 1275
            LVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV KK ++++QKYEN T
Sbjct: 746  LVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVFKKYSSVNQKYENNT 805

Query: 1274 SDRIIRPQREGYEAERMQILDDDGLAAPGEIIRPHDIYINKESPTITRGPVTSPM-GLPD 1098
            +DRI+RP R       MQILDDDGLAAPGEIIRP+DIY+NK+SP IT+G   SP+ G+PD
Sbjct: 806  ADRIVRPNRNEDFTGNMQILDDDGLAAPGEIIRPNDIYVNKQSPIITKG---SPLPGIPD 862

Query: 1097 SAYKPSRQTYKGPEGETAVVDRVSLCSDKNSNLCIKFMIRHTRRPEVGDKFSSRHGQKGV 918
            +AY+P RQ +KG EGE  VVDRV+L +DKN  LCIKF+IR TRRPE+GDKFSSRHGQKGV
Sbjct: 863  NAYRPCRQIFKGSEGEPTVVDRVALSTDKNDCLCIKFLIRQTRRPELGDKFSSRHGQKGV 922

Query: 917  CGTIVQQEDLPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSSGRFHYGSAFGE 738
            CGTIVQQED PFSERGICPDLIMNPHGFPSRMTVGKMIELLG KAGVS GRFHYGSAFGE
Sbjct: 923  CGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGE 982

Query: 737  PSGHADRVEAISETLVKHGFSYSGKDFIYSGITGEPLQAYIFMGPIYYQKLKHMVLDKMH 558
            PSGHAD+V+AISETL+K GFSY+GKDF+YSGITG PLQAYIFMGPIYYQKLKHMVLDKMH
Sbjct: 983  PSGHADKVDAISETLIKRGFSYNGKDFLYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMH 1042

Query: 557  ARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCR 378
            ARGSGPRVM+TRQPTEGR+RNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCR
Sbjct: 1043 ARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCR 1102

Query: 377  KCGLLGYYNFKLKTANCSTCKNGDNISTMKLPYACKLLFQELQAMNIVPRLKLTEA 210
             CGLLGYYN KLKT  CS+CKNGDNISTMKLPYACKLL QELQ+MNIVPRLKL EA
Sbjct: 1103 VCGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLAEA 1158


>ref|XP_011003286.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 isoform X1
            [Populus euphratica]
          Length = 1151

 Score = 1848 bits (4788), Expect = 0.0
 Identities = 914/1136 (80%), Positives = 1002/1136 (88%), Gaps = 2/1136 (0%)
 Frame = -2

Query: 3611 IDKQS-LAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFLRTQIKKIVRANDLITSRV 3435
            IDKQ   AAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYF+   IKKIVRAND I S V
Sbjct: 19   IDKQKHAAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFINIGIKKIVRANDRIVSTV 78

Query: 3434 DPSIYLRYKDVRIGEPSIIIDGVTEKLTPHKCRLADLTYAAPIYVNIEYITGSHGSKTTQ 3255
            DPS+YLR+ DV+IG+PS+++D ++E++TPH CRL+D TYAAPI+VNIEYI+GSHG K   
Sbjct: 79   DPSLYLRFTDVKIGKPSMVVDAISEQITPHMCRLSDTTYAAPIWVNIEYISGSHGRKEKM 138

Query: 3254 MKRDVIIGRMPIMLRSCCCVLYGKDEEELARCGECPLDPGGYFVIKGTEKVILIQEQLSK 3075
            +K DV+IGRMPIMLRSCCCVL GK+E ELAR GECPLDPGGYFV+KGTEKVILIQEQLSK
Sbjct: 139  IKNDVVIGRMPIMLRSCCCVLSGKNEAELARLGECPLDPGGYFVVKGTEKVILIQEQLSK 198

Query: 3074 NRIIIDTDKKNCVQASVTSSTEATKSKTVIKMEKEKIYLYLNQFTSKVPIMMVMKAMGME 2895
            NRIIID DKK  + ASVTSSTEATKSKTVI MEKEK+YL LNQF  K+PIM+VMKAMGME
Sbjct: 199  NRIIIDNDKKGNINASVTSSTEATKSKTVILMEKEKMYLCLNQFAKKIPIMVVMKAMGME 258

Query: 2894 SDQEVVQMIGRDPRYSELLLPSIEDCAKEAVYTQYQALEYLEQKVKKLPYSNALIEK-EG 2718
            SDQEVVQM+GRDPRYS LLLPSIE+CA   VYT+ QALEYLE  VK+  YS++  EK E 
Sbjct: 259  SDQEVVQMVGRDPRYSALLLPSIEECASHGVYTREQALEYLEAMVKRSTYSSSSTEKQEN 318

Query: 2717 RALGILRDIFLANILVQQDNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYAGNKRXXXXX 2538
            RAL ILRD+F+AN+ V+++NFRPKCIYVAVMLRRMMEA+LNKDAMDDKDY GNKR     
Sbjct: 319  RALAILRDVFIANVPVRKNNFRPKCIYVAVMLRRMMEALLNKDAMDDKDYVGNKRLELSG 378

Query: 2537 XXXXXXXXXXFKTMNDEARKTIDTILAKPSRSSRFDISQFIVKDSITVGLERTLSTGNWD 2358
                      FKTM  E +K  D +L K +RSSRFD SQ+IV+DSIT GLER LSTGNWD
Sbjct: 379  QLISLLFEDLFKTMITEVQKIADALLVKQNRSSRFDFSQYIVRDSITNGLERALSTGNWD 438

Query: 2357 VKRFRMHRKGMTQVVARLSYIGTLGHMTKVSPQFEKSRKVSGPRALQPSQWGMLCPCDTP 2178
            VKRFRM+RKG+TQV+ RLSY+ +LGHMT++SPQFEKSRKVSGPRALQPSQWGMLCPCDTP
Sbjct: 439  VKRFRMNRKGVTQVLVRLSYMASLGHMTRISPQFEKSRKVSGPRALQPSQWGMLCPCDTP 498

Query: 2177 EGEACGLVKNLALMTHVTTDEDEAPLVSLCYSLGVEDLELLSGEELHMPNSYLIILNGLI 1998
            EGEACGLVKNLALMTHVTTDE+E+PL+SLC  LGVEDLELLSGEELH PNS+L+I NGLI
Sbjct: 499  EGEACGLVKNLALMTHVTTDEEESPLISLCKCLGVEDLELLSGEELHTPNSFLVIFNGLI 558

Query: 1997 LGKHRRPQWFANAMRKLRRAGKIGEFVSIFVNEKQRCVYIASDGGRVCRPLVIADKGVPR 1818
            LGKHRRP  FANAMRKLRRAGKIGEFVS+FVNEKQR VYIASDGGRVCRPLVIADKGV R
Sbjct: 559  LGKHRRPHQFANAMRKLRRAGKIGEFVSVFVNEKQRAVYIASDGGRVCRPLVIADKGVSR 618

Query: 1817 IKEHHMKELRDGVRTFNSFLKDGLIEYLDVNEENNALIALYEENAKEGTTHIEIEPFTIL 1638
            IKEHHM+EL DG RTF+ FL +GLIEYLDVNEENNALIALYE  A   TTHIEIEPFTIL
Sbjct: 619  IKEHHMRELMDGARTFDDFLHEGLIEYLDVNEENNALIALYEWEATPETTHIEIEPFTIL 678

Query: 1637 GVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNELTRMDTLIYLLVYPQRPLLTTRTI 1458
            GV AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYN+L RMD+L+YLLVYPQRPLLTTRTI
Sbjct: 679  GVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLGRMDSLLYLLVYPQRPLLTTRTI 738

Query: 1457 ELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKMAAISQKYENG 1278
            ELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIV+KK    +QKYENG
Sbjct: 739  ELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVLKKYTCTNQKYENG 798

Query: 1277 TSDRIIRPQREGYEAERMQILDDDGLAAPGEIIRPHDIYINKESPTITRGPVTSPMGLPD 1098
             SDRI+RP++     ER ++LDDDGLAAPGEIIR  DIYINKESP  TRGP+ S   L D
Sbjct: 799  ASDRILRPRK---NEERERVLDDDGLAAPGEIIRHGDIYINKESPIETRGPLKSAAALAD 855

Query: 1097 SAYKPSRQTYKGPEGETAVVDRVSLCSDKNSNLCIKFMIRHTRRPEVGDKFSSRHGQKGV 918
              Y+P  Q +KG EGE+ VVDRV+LCSDKN+NLCIK+ IRHTRRPEVGDKFSSRHGQKGV
Sbjct: 856  VKYRPCAQIFKGTEGESCVVDRVALCSDKNNNLCIKYKIRHTRRPEVGDKFSSRHGQKGV 915

Query: 917  CGTIVQQEDLPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSSGRFHYGSAFGE 738
            CGTI+QQED PFSERGICPDLIMNPHGFPSRMTVGKMIELLG KAGVS GRFHYGSAFGE
Sbjct: 916  CGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGE 975

Query: 737  PSGHADRVEAISETLVKHGFSYSGKDFIYSGITGEPLQAYIFMGPIYYQKLKHMVLDKMH 558
            PSGHADRVEAISETLVKHGFSY+GKDFIYSGITG PLQAYIFMGPIYYQKLKHMVLDKMH
Sbjct: 976  PSGHADRVEAISETLVKHGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMH 1035

Query: 557  ARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCR 378
            ARGSGPRVM+TRQPT+GR+RNGGLRVGEME+DCL+AYG SML+YERLM+SSD FE QVCR
Sbjct: 1036 ARGSGPRVMLTRQPTDGRARNGGLRVGEMEKDCLVAYGTSMLLYERLMVSSDQFEAQVCR 1095

Query: 377  KCGLLGYYNFKLKTANCSTCKNGDNISTMKLPYACKLLFQELQAMNIVPRLKLTEA 210
             CGLLGYYN KLK A C+TCKNGD +STMKLPYACKLL QELQ+MNIVPRL+L EA
Sbjct: 1096 ACGLLGYYNQKLKAAMCTTCKNGDKVSTMKLPYACKLLIQELQSMNIVPRLRLAEA 1151


>ref|XP_008462447.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Cucumis
            melo]
          Length = 1158

 Score = 1847 bits (4783), Expect = 0.0
 Identities = 914/1136 (80%), Positives = 1005/1136 (88%), Gaps = 2/1136 (0%)
 Frame = -2

Query: 3611 IDKQSLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFLRTQIKKIVRANDLITSRVD 3432
            IDKQ +  P+KSAVDKFQLLPEFLKVRGLVKQHLDSFNYF+ T+IKKIV+AND I S  D
Sbjct: 26   IDKQFIGLPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTEIKKIVKANDRIESSTD 85

Query: 3431 PSIYLRYKDVRIGEPSIIIDGVTEKLTPHKCRLADLTYAAPIYVNIEYITGSHGSKTTQM 3252
            PSIYLR+ DVRIGEPS+ ++ V+E + PH CRL+DLTYAAPI V+IEYI  SH  K  + 
Sbjct: 86   PSIYLRFLDVRIGEPSVTVNAVSETINPHMCRLSDLTYAAPILVDIEYIEESHAQKAPRE 145

Query: 3251 KRDVIIGRMPIMLRSCCCVLYGKDEEELARCGECPLDPGGYFVIKGTEKVILIQEQLSKN 3072
            K+DV+IGRMPIMLRS CCVL+GKDE ELAR GECPLDPGGYF+IKGTEKV+LIQEQLSKN
Sbjct: 146  KKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECPLDPGGYFIIKGTEKVVLIQEQLSKN 205

Query: 3071 RIIIDTDKKNCVQASVTSSTEATKSKTVIKMEKEKIYLYLNQFTS-KVPIMMVMKAMGME 2895
            RIIIDTDKK  + ASVTSSTEATKSKTVIKME EKIYL LN FT+ K+PIM+V+KAMGME
Sbjct: 206  RIIIDTDKKGNINASVTSSTEATKSKTVIKMENEKIYLQLNIFTTPKIPIMVVLKAMGME 265

Query: 2894 SDQEVVQMIGRDPRYSELLLPSIEDCAKEAVYTQYQALEYLEQKVKKLPYSNALIEKEGR 2715
            S QEVVQM+GRDPRY  LLLPSIE+CAKE +YTQ QALEYLE KVKK  +++A  EKEGR
Sbjct: 266  SVQEVVQMVGRDPRYGALLLPSIEECAKEKIYTQEQALEYLETKVKKFQFASAPPEKEGR 325

Query: 2714 ALGILRDIFLANILVQQDNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYAGNKRXXXXXX 2535
            ALGILRD+FLAN+ V ++NF PKCIYVAVM+RRMM+AIL+KDAMDDKDY GNKR      
Sbjct: 326  ALGILRDVFLANVPVYKNNFHPKCIYVAVMMRRMMDAILSKDAMDDKDYVGNKRLELSGQ 385

Query: 2534 XXXXXXXXXFKTMNDEARKTIDTILAKPSRSSRFDISQFIVKDSITVGLERTLSTGNWDV 2355
                     FKTM  E +KTID +L K SRSSRFD SQ +  + I+ GLERTLSTGNWDV
Sbjct: 386  LISLLFEDLFKTMVSEVKKTIDKLLGKHSRSSRFDFSQHLNSNIISFGLERTLSTGNWDV 445

Query: 2354 KRFRMHRKGMTQVVARLSYIGTLGHMTKVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPE 2175
            KRFRMHRKGM+QV+ARLS+I T+GH+T+VSPQFEKSRKVSGPRALQPSQWGMLCPCDTPE
Sbjct: 446  KRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPE 505

Query: 2174 GEACGLVKNLALMTHVTTDEDEAPLVSLCYSLGVEDLELLSGEELHMPNSYLIILNGLIL 1995
            GEACGLVKNLALMTHVTTD++E PL+SLCY LGVEDLELLS EELH PNS+L+I NG IL
Sbjct: 506  GEACGLVKNLALMTHVTTDQEEGPLISLCYCLGVEDLELLSAEELHTPNSFLVIFNGRIL 565

Query: 1994 GKHRRPQWFANAMRKLRRAGKIGEFVSIFVNEKQRCVYIASDGGRVCRPLVIADKGVPRI 1815
            GKHRRPQ+FA  MR LRRAGKIGEFVS+FVNEKQ CVYIASDGGRVCRPLVIADKGV RI
Sbjct: 566  GKHRRPQYFATGMRMLRRAGKIGEFVSVFVNEKQHCVYIASDGGRVCRPLVIADKGVSRI 625

Query: 1814 KEHHMKELRDGVRTFNSFLKDGLIEYLDVNEENNALIALYEENAKEGTTHIEIEPFTILG 1635
            +E+HMKEL DGVRTF+ FL+DGLIEYLDVNEENNALIALYE  A   TTHIEIEP TILG
Sbjct: 626  REYHMKELSDGVRTFDDFLRDGLIEYLDVNEENNALIALYEGEATPETTHIEIEPLTILG 685

Query: 1634 VCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNELTRMDTLIYLLVYPQRPLLTTRTIE 1455
            V AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYN+L RMDTL+YLLVYPQRPLLTT+TIE
Sbjct: 686  VVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDTLLYLLVYPQRPLLTTKTIE 745

Query: 1454 LVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKMAAISQKYENGT 1275
            LVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV KK ++++QKYEN T
Sbjct: 746  LVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVFKKYSSVNQKYENNT 805

Query: 1274 SDRIIRPQREGYEAERMQILDDDGLAAPGEIIRPHDIYINKESPTITRGPVTSPM-GLPD 1098
            +DRI+RP R       MQILDDDGLAAPGEIIRP+D+Y+NK+SP IT+G   SP+ G+PD
Sbjct: 806  ADRIVRPNRNEDFTGNMQILDDDGLAAPGEIIRPNDVYVNKQSPIITKG---SPLPGIPD 862

Query: 1097 SAYKPSRQTYKGPEGETAVVDRVSLCSDKNSNLCIKFMIRHTRRPEVGDKFSSRHGQKGV 918
            SAY+P RQ +KG EGE  VVDRV+L +DKN  LCIKF+IR TRRPE+GDKFSSRHGQKGV
Sbjct: 863  SAYRPCRQIFKGSEGEPTVVDRVALSTDKNDCLCIKFLIRQTRRPELGDKFSSRHGQKGV 922

Query: 917  CGTIVQQEDLPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSSGRFHYGSAFGE 738
            CGTIVQQED PFSERGICPDLIMNPHGFPSRMTVGKMIELLG KAGVS GRFHYGSAFGE
Sbjct: 923  CGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGE 982

Query: 737  PSGHADRVEAISETLVKHGFSYSGKDFIYSGITGEPLQAYIFMGPIYYQKLKHMVLDKMH 558
            PSGHAD+V+AISETL++ GFSY+GKDF+YSGITG PLQAYIFMGPIYYQKLKHMVLDKMH
Sbjct: 983  PSGHADKVDAISETLIERGFSYNGKDFLYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMH 1042

Query: 557  ARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCR 378
            ARGSGPRVM+TRQPTEGR+RNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCR
Sbjct: 1043 ARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCR 1102

Query: 377  KCGLLGYYNFKLKTANCSTCKNGDNISTMKLPYACKLLFQELQAMNIVPRLKLTEA 210
             CGLLGYYN KLKT  CS+CKNGDNISTMKLPYACKLL QELQ+MNIVPRLKL EA
Sbjct: 1103 VCGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLAEA 1158