BLASTX nr result

ID: Forsythia23_contig00014519 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia23_contig00014519
         (1336 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_619549.1| Inclusion body matrix protein [Figwort mosaic v...    65   2e-07
ref|NP_659398.1| hypothetical protein [Mirabilis mosaic virus] g...    56   2e-06
ref|YP_006732335.1| inclusion body matrix protein [Dahlia mosaic...    57   2e-06
ref|YP_001931962.1| inclusion body/transactivation factor [Lamiu...    60   4e-06

>ref|NP_619549.1| Inclusion body matrix protein [Figwort mosaic virus]
            gi|124052|sp|P09524.1|IBMP_FMVD RecName:
            Full=Transactivator/viroplasmin protein; Short=Tav;
            AltName: Full=Inclusion body matrix protein [Figwort
            mosaic virus (STRAIN DXS)] gi|58814|emb|CAA29528.1|
            unnamed protein product [Figwort mosaic virus]
          Length = 512

 Score = 64.7 bits (156), Expect = 2e-07
 Identities = 43/145 (29%), Positives = 73/145 (50%), Gaps = 3/145 (2%)
 Frame = -2

Query: 1332 DLEEIKVIDNSLFQSIKDFCKYVIKDPDLQMIFKINSTIPFWDKDNILVKVYHHVQIKTV 1153
            +L+E+K     + ++IK+F K V+   D  +  KI S+IP W   +   + YH +QI   
Sbjct: 301  NLQELKWFPEGIVKAIKNFRKKVLNAKDAAIFIKIFSSIPDW-VQSTRYEPYHFIQIGI- 358

Query: 1152 QEAFLDRPIEGQTTCVNELII---DEWRALSYQRILTGLKTFNKDSKIKINHFSKFILMT 982
              A   + +     C  E  +   ++ R  S Q I   L+  N++S IK+N+ S   +M 
Sbjct: 359  --AKTKKELPSSKVCKEEFSVQSLNKVRVQSLQTISQKLQEINEESSIKVNYCSSTCIMV 416

Query: 981  SKTRSVITTEGIKILCNFEKNFYNL 907
            SK +   +TE +K++  FE N  N+
Sbjct: 417  SKFQKKTSTEDLKLVGIFESNLVNI 441


>ref|NP_659398.1| hypothetical protein [Mirabilis mosaic virus]
            gi|21427197|gb|AAM53129.1| ORFVI [Mirabilis mosaic virus]
          Length = 536

 Score = 55.8 bits (133), Expect(2) = 2e-06
 Identities = 40/137 (29%), Positives = 69/137 (50%), Gaps = 1/137 (0%)
 Frame = -2

Query: 1332 DLEEIKVIDNSLFQSIKDFCKYVIKDPDLQMIFKINSTIPFWDKDNILVKVYHHVQIKTV 1153
            +L+EIK   +   +++K F   + K  D  +  ++ S++P W+K+    + YH ++I   
Sbjct: 330  NLQEIKEFPSEFKKAVKTFRSKIAKAKDANIFIRVTSSLPDWEKEEDY-QGYHFLEIGLA 388

Query: 1152 QEAFLDRPIEGQTTCVN-ELIIDEWRALSYQRILTGLKTFNKDSKIKINHFSKFILMTSK 976
            QE    RP E      N    I + R      ILT +   ++ SK KIN+  + +L+TS 
Sbjct: 389  QEREF-RPSERMEDSENLHQQIIQVRINGLINILTAMGKIDEKSKTKINYAHQHVLITSY 447

Query: 975  TRSVITTEGIKILCNFE 925
              + I++  I IL +FE
Sbjct: 448  CGTPISSTDINILSSFE 464



 Score = 25.0 bits (53), Expect(2) = 2e-06
 Identities = 13/47 (27%), Positives = 18/47 (38%)
 Frame = -3

Query: 875 LCKALKSSLGKYHACQWCGNTKKDLDISQIESDNSKVGETDSHSQSE 735
           LC+ LK  +   H C+ C        IS+  S       + S  Q E
Sbjct: 482 LCQKLKKMMPDSHLCEACEAGPSTKKISEASSSGPSTHSSISEQQDE 528


>ref|YP_006732335.1| inclusion body matrix protein [Dahlia mosaic virus]
            gi|32351197|gb|AAP75616.1| inclusion body matrix protein
            [Dahlia mosaic virus] gi|404435875|gb|AFR69284.1|
            inclusion body matrix protein [Dahlia mosaic virus]
          Length = 504

 Score = 56.6 bits (135), Expect(2) = 2e-06
 Identities = 39/152 (25%), Positives = 77/152 (50%), Gaps = 3/152 (1%)
 Frame = -2

Query: 1332 DLEEIKVIDNSLFQSIKDFCKYVIKDPDLQMIFKINSTIPFWDKDNILVKVYHHVQIKTV 1153
            +L+EI        +++K F   +    D  +  +  ST+P W++++   + YH V+I   
Sbjct: 296  NLQEIGRFPEGFKKAVKKFRSKIAAAKDAPIFIQCTSTLPDWEEEHSY-QAYHLVEIGLS 354

Query: 1152 QEAFLDRPIEGQTTCVNELIIDEWRALSYQRILTGLKTFNKDSKIKINHFSKFILMTSKT 973
            +    + P E + +      + + R   + RIL   ++ N ++KIKIN+  + +L+TS  
Sbjct: 355  KNREFNPPQEMKDSGDLLYQLAQVRTNGFTRILQKTQSINGETKIKINYSHERVLITSHY 414

Query: 972  RSVITTEGIKILCNFEKNFYN---LPNTPTKL 886
             + I+ + + IL +FE++  N   +  T TKL
Sbjct: 415  GATISRQDVSILSSFEESIINNDVMVGTSTKL 446



 Score = 24.3 bits (51), Expect(2) = 2e-06
 Identities = 16/52 (30%), Positives = 22/52 (42%)
 Frame = -3

Query: 875 LCKALKSSLGKYHACQWCGNTKKDLDISQIESDNSKVGETDSHSQSE*KESS 720
           LCK LK  L   H C  C         +   ++ S    +DS S +E K+ S
Sbjct: 448 LCKQLKKLLADNHNCSACAGG------ASTSNNTSFTACSDSSSNNEEKDVS 493


>ref|YP_001931962.1| inclusion body/transactivation factor [Lamium leaf distortion virus]
            gi|172041758|gb|ACB69768.1| inclusion
            body/transactivation factor [Lamium leaf distortion
            virus]
          Length = 517

 Score = 60.1 bits (144), Expect = 4e-06
 Identities = 43/173 (24%), Positives = 85/173 (49%), Gaps = 5/173 (2%)
 Frame = -2

Query: 1332 DLEEIKVIDNSLFQSIKDFCKYVIKDPDLQMIFKINSTIPFWDKDNILVK-VYHHVQIKT 1156
            +L EI ++   + +++K F +  IKDP  ++  K +STIP W K+   V   +HH+ +  
Sbjct: 326  NLLEISLLPKEIRRNVKHFRRKCIKDPSKKIYLKFSSTIPRWGKEGEQVYWPHHHITMGV 385

Query: 1155 VQEAFLDRPIEGQTTCVNELIIDEWRALSYQRILTGLKTFNKDSKIKINHFSKFILMTSK 976
              E    +P       +    ++E      Q+ +  +  F+K+ K  +N     +L+TSK
Sbjct: 386  RSEEEQYQPSRQMEATLEVQDLEELAVQKIQQFIEKMFEFSKEDKTFVNLIWNRVLITSK 445

Query: 975  TRSVITTEGIKILCNFE---KNFYNL-PNTPTKL*RTAVQSTQVKSRKISCMS 829
            +   ++T  ++++  F+   KN Y+  P+ P        +S + KS + SC++
Sbjct: 446  SFKPLSTSHVELILLFQKRLKNHYDFGPHHP-----LICKSIEKKSVEYSCLN 493


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