BLASTX nr result

ID: Forsythia23_contig00013860 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia23_contig00013860
         (546 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011072001.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop...    98   2e-18
ref|XP_012855627.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop...    82   1e-13
ref|XP_009795960.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop...    65   1e-08
ref|XP_009629671.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop...    59   1e-06
ref|XP_004236291.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop...    59   1e-06
ref|XP_009777467.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...    58   2e-06
ref|XP_009592488.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...    56   8e-06

>ref|XP_011072001.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Sesamum
           indicum]
          Length = 319

 Score = 98.2 bits (243), Expect = 2e-18
 Identities = 63/138 (45%), Positives = 70/138 (50%), Gaps = 16/138 (11%)
 Frame = -3

Query: 367 KPIAMAANGCLISVPSLFTKAKAVYSHSTISIPLKPV-----------XXXXXXXXXXXX 221
           KP+ MA NGCL S PSLF  +KA YSH  + IP KPV                       
Sbjct: 10  KPMLMATNGCLTSTPSLFATSKASYSHRYLPIPFKPVKFQLCCSYSSSRSFPALFSLKKK 69

Query: 220 XXXLRFSVIAALQEENNPVLLEEQET-----QGNFNWDNQXXXXXXXXXXXXXXXXXEAA 56
              LR SV+AA Q+ENNPV+  EQE      QGNF WD                   EA 
Sbjct: 70  ESVLRVSVVAAQQQENNPVVFAEQEEGEQEFQGNFTWD----ASDNEVEGGESDGVVEAV 125

Query: 55  GDAGESDGYVEPPEEAKV 2
           GDAG+SDGYVEPPEEAKV
Sbjct: 126 GDAGDSDGYVEPPEEAKV 143


>ref|XP_012855627.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like
           [Erythranthe guttatus] gi|604302661|gb|EYU22218.1|
           hypothetical protein MIMGU_mgv1a010790mg [Erythranthe
           guttata]
          Length = 301

 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 55/137 (40%), Positives = 65/137 (47%), Gaps = 13/137 (9%)
 Frame = -3

Query: 373 ATKPIAMAANGCLISVPSLFTKAKAVYSHSTISIPLKPV-----------XXXXXXXXXX 227
           A KP +MA NGC  SVPSLFT ++A YSH  +SI  KPV                     
Sbjct: 8   ALKPASMATNGCFTSVPSLFTTSRASYSHPNLSIRFKPVKFQLNCSYSSSISLPTFSSLK 67

Query: 226 XXXXXLRFSVIAALQEENNPVLLEEQET--QGNFNWDNQXXXXXXXXXXXXXXXXXEAAG 53
                +R S+++ALQEE NPVL+EEQE   QGNFNW                      A 
Sbjct: 68  KKETLIRVSIVSALQEEGNPVLVEEQEEGFQGNFNW---------------------GAA 106

Query: 52  DAGESDGYVEPPEEAKV 2
              E+D   EP EEAKV
Sbjct: 107 SGTENDVVSEPSEEAKV 123


>ref|XP_009795960.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Nicotiana
           sylvestris]
          Length = 289

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 6/133 (4%)
 Frame = -3

Query: 382 MSCA----TKPIAMAANGCLISVPSLFTKAKAVYSHSTISIPLKPVXXXXXXXXXXXXXX 215
           MSCA    TKP++MA NGCLIS+P  FT  K++ S+  +S  LKP+              
Sbjct: 1   MSCAIKPLTKPLSMATNGCLISLPPFFTTTKSISSYPFLSTQLKPISLSSSLPTLLSLNK 60

Query: 214 XLRF--SVIAALQEENNPVLLEEQETQGNFNWDNQXXXXXXXXXXXXXXXXXEAAGDAGE 41
                 + ++ L E++N ++L++QE  G+F                         G+AGE
Sbjct: 61  RTTQFPTFVSVLSEDDNTLVLDDQEQGGDF---------------------PSFVGEAGE 99

Query: 40  SDGYVEPPEEAKV 2
           ++ Y EP E+AK+
Sbjct: 100 TEEYQEPSEDAKL 112


>ref|XP_009629671.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Nicotiana
           tomentosiformis]
          Length = 291

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 4/127 (3%)
 Frame = -3

Query: 370 TKPIAMAANGCLISVPSLFTKAKAVYSHSTISIPLKPVXXXXXXXXXXXXXXXLRF--SV 197
           TKP++MA NGCLIS+P  FT  K++ S+  +S PLKP+                    + 
Sbjct: 9   TKPLSMATNGCLISLPPFFTPTKSISSYPFLSTPLKPISLSSSFSSLLSLKKKSTQFPTF 68

Query: 196 IAALQEENNPVLLEEQETQGNFNWDNQXXXXXXXXXXXXXXXXXEAAGDAG--ESDGYVE 23
           ++ L E++N ++L++QE  G+F                         G+ G  E++ Y E
Sbjct: 69  VSVLSEDDNTLVLDDQEQGGDF---------------------PSFVGETGETETEEYQE 107

Query: 22  PPEEAKV 2
           P E+AK+
Sbjct: 108 PSEDAKL 114


>ref|XP_004236291.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Solanum
           lycopersicum]
          Length = 296

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 49/139 (35%), Positives = 63/139 (45%), Gaps = 12/139 (8%)
 Frame = -3

Query: 382 MSCATKPI----AMAANGCLISVPSLFTKAKAVYSHSTISIPLKPVXXXXXXXXXXXXXX 215
           MS  TKP+    +MA N CLIS+P  FT  K   S S IS PLKP+              
Sbjct: 1   MSSLTKPLIKNLSMATNSCLISLPPFFTTTK---SMSFISTPLKPISLSSSLSLKKTTTQ 57

Query: 214 XLRF-SVIAALQEENNPVLLEEQETQGNFNWDNQXXXXXXXXXXXXXXXXXEAAGDAGES 38
                SV+AALQ++++ V LE++E  G                         + GDAGES
Sbjct: 58  FPSIVSVVAALQDDDSSVGLEDKEQGGE-----------------ALSFDFASVGDAGES 100

Query: 37  D-------GYVEPPEEAKV 2
           D        Y EPPE+AK+
Sbjct: 101 DEAEAEAEEYQEPPEDAKL 119


>ref|XP_009777467.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Nicotiana
           sylvestris] gi|133248|sp|P19683.1|ROC4_NICSY RecName:
           Full=31 kDa ribonucleoprotein, chloroplastic; Flags:
           Precursor [Nicotiana sylvestris]
           gi|19741|emb|CAA40364.1| 31kD chloroplast
           ribonucleoprotein [Nicotiana sylvestris]
           gi|19756|emb|CAA37885.1| unnamed protein product
           [Nicotiana sylvestris]
          Length = 315

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 51/146 (34%), Positives = 72/146 (49%), Gaps = 19/146 (13%)
 Frame = -3

Query: 382 MSCATKPI----AMAANGCLISVPSLF---TKAKAVYSHSTISIPLKPVXXXXXXXXXXX 224
           MSCATKPI    +MA N CLIS+P LF   TK+K+ +++  +S  LKP+           
Sbjct: 1   MSCATKPIIKPSSMATNSCLISLPPLFATTTKSKS-FAYPYLSNTLKPIKLLHLSCTYSP 59

Query: 223 XXXXLRFSV-IAALQEENNPVLL--EEQETQGNFNWDNQXXXXXXXXXXXXXXXXXEAAG 53
                +    ++ALQEE N ++L  + QE+   FN++                   EA G
Sbjct: 60  CILSPKKKTSVSALQEEENTLILDGQGQESGDLFNFE-------PSGEETEEEGFVEAVG 112

Query: 52  DAGESD---------GYVEPPEEAKV 2
           DAGESD          + EPPE+AK+
Sbjct: 113 DAGESDEVEADEEEEEFQEPPEDAKL 138


>ref|XP_009592488.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Nicotiana
           tomentosiformis]
          Length = 319

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 52/150 (34%), Positives = 72/150 (48%), Gaps = 23/150 (15%)
 Frame = -3

Query: 382 MSCATKPI----AMAANGCLISVPSLF---TKAKAVYSHSTISIPLKPVXXXXXXXXXXX 224
           MSCA KPI    +MA N CLIS+P LF   TK+K+ +S+  +S  LKP+           
Sbjct: 1   MSCAIKPIIKPSSMATNSCLISLPPLFATTTKSKS-FSYPHLSNTLKPIKLLHLSCSYSP 59

Query: 223 XXXXLRFSV-----IAALQEENNPVLL--EEQETQGNFNWDNQXXXXXXXXXXXXXXXXX 65
                  S+     ++ALQEE N ++L  +EQE+   FN++                   
Sbjct: 60  SSLPFILSLKKKTSVSALQEEENTLILDGQEQESGDLFNFE-------ASGEETEEEGFV 112

Query: 64  EAAGDAGESD---------GYVEPPEEAKV 2
           EA  DAGESD          + EPPE+AK+
Sbjct: 113 EAVEDAGESDEVEAEEEEEEFQEPPEDAKL 142


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