BLASTX nr result

ID: Forsythia23_contig00013411 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia23_contig00013411
         (482 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010316923.1| PREDICTED: pentatricopeptide repeat-containi...    60   6e-07
ref|XP_004233109.1| PREDICTED: pentatricopeptide repeat-containi...    60   6e-07
ref|XP_012849284.1| PREDICTED: pentatricopeptide repeat-containi...    59   1e-06
gb|EYU27564.1| hypothetical protein MIMGU_mgv1a019698mg [Erythra...    59   1e-06
ref|XP_006365554.1| PREDICTED: pentatricopeptide repeat-containi...    59   2e-06

>ref|XP_010316923.1| PREDICTED: pentatricopeptide repeat-containing protein At3g20730
           isoform X2 [Solanum lycopersicum]
          Length = 578

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 29/76 (38%), Positives = 49/76 (64%)
 Frame = +1

Query: 253 LANKSHHEAVSDIYTMMPQLSSLKSTVESLCDLKKLREALMLILSQPLETYHYCLSSKVL 432
           + N+++   V+ + + +P+   LKS++ESLC+ K+L EAL L    P+E   Y + S ++
Sbjct: 1   MMNRTYRNVVNWL-SPIPKFRPLKSSIESLCNAKRLTEALRLAFDNPIEA-DYTIYSNII 58

Query: 433 QLCTELKSRKSGHLIH 480
           QLC +LK+ K G L+H
Sbjct: 59  QLCIDLKAHKQGRLVH 74


>ref|XP_004233109.1| PREDICTED: pentatricopeptide repeat-containing protein At3g20730
           isoform X1 [Solanum lycopersicum]
           gi|723675739|ref|XP_010316922.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g20730
           isoform X1 [Solanum lycopersicum]
          Length = 614

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 29/76 (38%), Positives = 49/76 (64%)
 Frame = +1

Query: 253 LANKSHHEAVSDIYTMMPQLSSLKSTVESLCDLKKLREALMLILSQPLETYHYCLSSKVL 432
           + N+++   V+ + + +P+   LKS++ESLC+ K+L EAL L    P+E   Y + S ++
Sbjct: 1   MMNRTYRNVVNWL-SPIPKFRPLKSSIESLCNAKRLTEALRLAFDNPIEA-DYTIYSNII 58

Query: 433 QLCTELKSRKSGHLIH 480
           QLC +LK+ K G L+H
Sbjct: 59  QLCIDLKAHKQGRLVH 74


>ref|XP_012849284.1| PREDICTED: pentatricopeptide repeat-containing protein At3g20730
           [Erythranthe guttatus]
          Length = 586

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 29/57 (50%), Positives = 39/57 (68%)
 Frame = +1

Query: 310 LSSLKSTVESLCDLKKLREALMLILSQPLETYHYCLSSKVLQLCTELKSRKSGHLIH 480
           L+ L   V+SLC  +KL EA+ LI S+ LE   Y + SK+L+LCT+L SRK G L+H
Sbjct: 5   LTPLNCLVDSLCHSRKLGEAVRLIASRTLEPEQYSVYSKILRLCTDLNSRKCGQLVH 61


>gb|EYU27564.1| hypothetical protein MIMGU_mgv1a019698mg [Erythranthe guttata]
          Length = 384

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 29/57 (50%), Positives = 39/57 (68%)
 Frame = +1

Query: 310 LSSLKSTVESLCDLKKLREALMLILSQPLETYHYCLSSKVLQLCTELKSRKSGHLIH 480
           L+ L   V+SLC  +KL EA+ LI S+ LE   Y + SK+L+LCT+L SRK G L+H
Sbjct: 5   LTPLNCLVDSLCHSRKLGEAVRLIASRTLEPEQYSVYSKILRLCTDLNSRKCGQLVH 61


>ref|XP_006365554.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g20730-like [Solanum tuberosum]
          Length = 614

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 29/73 (39%), Positives = 44/73 (60%)
 Frame = +1

Query: 262 KSHHEAVSDIYTMMPQLSSLKSTVESLCDLKKLREALMLILSQPLETYHYCLSSKVLQLC 441
           K  +  V +  ++  Q   LKS++ESLC+ K+L EAL L    P+E   Y + S ++QLC
Sbjct: 3   KRTYRNVVNWLSLTSQFPPLKSSIESLCNAKRLTEALRLAFDNPIEA-DYTIYSNIIQLC 61

Query: 442 TELKSRKSGHLIH 480
            +LK+ K G L+H
Sbjct: 62  IDLKAHKQGRLVH 74


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