BLASTX nr result
ID: Forsythia23_contig00013142
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia23_contig00013142
(434 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|WP_027596145.1| DNA-binding protein [Pseudomonas sp. LAIL14H... 119 1e-24
ref|WP_008100414.1| MULTISPECIES: cold-shock protein [Pseudomona... 119 1e-24
ref|WP_011533204.1| cold-shock protein [Pseudomonas entomophila]... 119 1e-24
ref|WP_016392649.1| cold-shock protein [Pseudomonas plecoglossic... 117 4e-24
ref|WP_009394041.1| cold-shock protein [Pseudomonas putida] gi|4... 115 9e-24
ref|WP_030724054.1| hypothetical protein [Streptomyces sp. NRRL ... 115 1e-23
ref|WP_023379795.1| MULTISPECIES: cold-shock protein [Pseudomona... 115 1e-23
ref|WP_039757645.1| DNA-binding protein [Pseudomonas fluorescens... 115 2e-23
emb|CCE31589.1| uncharacterized protein CPUR_05442 [Claviceps pu... 115 2e-23
ref|WP_042126302.1| DNA-binding protein [Pseudomonas japonica] 114 2e-23
ref|WP_038413369.1| DNA-binding protein [Pseudomonas cremoricolo... 114 2e-23
ref|WP_023047412.1| cold-shock protein [Pseudomonas putida] gi|5... 114 2e-23
ref|WP_032631434.1| DNA-binding protein [Pseudomonas syringae] g... 113 4e-23
ref|WP_003250656.1| MULTISPECIES: cold-shock protein CspA [Pseud... 113 4e-23
ref|WP_017132437.1| cold-shock protein [Pseudomonas agarici] 113 4e-23
ref|WP_012313861.1| MULTISPECIES: cold-shock protein [Pseudomona... 113 4e-23
gb|EFQ62339.1| cold shock protein (beta-ribbon, CspA family) [Ps... 113 6e-23
ref|WP_016499620.1| cold-shock protein [Pseudomonas putida] gi|5... 113 6e-23
gb|AFY20585.1| cold shock protein CapA [Pseudomonas sp. UW4] 113 6e-23
ref|WP_007905882.1| MULTISPECIES: cold-shock protein [Pseudomona... 113 6e-23
>ref|WP_027596145.1| DNA-binding protein [Pseudomonas sp. LAIL14HWK12:I7]
Length = 70
Score = 119 bits (297), Expect = 1e-24
Identities = 54/67 (80%), Positives = 62/67 (92%)
Frame = -3
Query: 417 TERQNGTVKWFNDEKGYGFITPENGSADLFVHFRAIEKDGFKSLKEGEAVTFVAEQGQKG 238
+ RQNGTVKWFNDEKGYGFITP++G DLFVHF+AIE DGFKSLKEG+AV+FVAE+GQKG
Sbjct: 2 SNRQNGTVKWFNDEKGYGFITPQSGGDDLFVHFKAIESDGFKSLKEGQAVSFVAEKGQKG 61
Query: 237 MQASSVR 217
MQA+ VR
Sbjct: 62 MQAAQVR 68
>ref|WP_008100414.1| MULTISPECIES: cold-shock protein [Pseudomonas]
gi|398246672|gb|EJN32153.1| cold shock protein
[Pseudomonas sp. GM84] gi|511104612|gb|EPB97495.1| cold
shock protein CapA [Pseudomonas plecoglossicida NB2011]
Length = 70
Score = 119 bits (297), Expect = 1e-24
Identities = 55/67 (82%), Positives = 60/67 (89%)
Frame = -3
Query: 417 TERQNGTVKWFNDEKGYGFITPENGSADLFVHFRAIEKDGFKSLKEGEAVTFVAEQGQKG 238
+ RQNGTVKWFNDEKGYGFITP G DLFVHF+AIE DGFKSLKEG+AVTFVAE+GQKG
Sbjct: 2 SNRQNGTVKWFNDEKGYGFITPAGGGDDLFVHFKAIESDGFKSLKEGQAVTFVAERGQKG 61
Query: 237 MQASSVR 217
MQA+ VR
Sbjct: 62 MQAAQVR 68
>ref|WP_011533204.1| cold-shock protein [Pseudomonas entomophila]
gi|95110091|emb|CAK14796.1| cold shock protein CapA
[Pseudomonas entomophila L48]
Length = 70
Score = 119 bits (297), Expect = 1e-24
Identities = 55/67 (82%), Positives = 60/67 (89%)
Frame = -3
Query: 417 TERQNGTVKWFNDEKGYGFITPENGSADLFVHFRAIEKDGFKSLKEGEAVTFVAEQGQKG 238
+ RQNGTVKWFNDEKGYGFITP G DLFVHF+AIE DGFKSLKEG+AVTFVAE+GQKG
Sbjct: 2 SNRQNGTVKWFNDEKGYGFITPAGGGDDLFVHFKAIESDGFKSLKEGQAVTFVAEKGQKG 61
Query: 237 MQASSVR 217
MQA+ VR
Sbjct: 62 MQAAQVR 68
>ref|WP_016392649.1| cold-shock protein [Pseudomonas plecoglossicida]
gi|511103541|gb|EPB96454.1| cold shock protein CapA
[Pseudomonas plecoglossicida NB2011]
Length = 70
Score = 117 bits (292), Expect = 4e-24
Identities = 53/66 (80%), Positives = 60/66 (90%)
Frame = -3
Query: 414 ERQNGTVKWFNDEKGYGFITPENGSADLFVHFRAIEKDGFKSLKEGEAVTFVAEQGQKGM 235
+RQNGTVKWFNDEKG+GFITP+ G DLFVHF+AIE DGFKSLKEG+ VTFVAE+GQKGM
Sbjct: 3 DRQNGTVKWFNDEKGFGFITPDGGGDDLFVHFKAIESDGFKSLKEGQKVTFVAEKGQKGM 62
Query: 234 QASSVR 217
QA+ VR
Sbjct: 63 QAAQVR 68
>ref|WP_009394041.1| cold-shock protein [Pseudomonas putida] gi|428765179|gb|EKX87292.1|
cold-shock DNA-binding domain-containing protein
[Pseudomonas putida CSV86]
Length = 71
Score = 115 bits (289), Expect = 9e-24
Identities = 53/67 (79%), Positives = 59/67 (88%)
Frame = -3
Query: 417 TERQNGTVKWFNDEKGYGFITPENGSADLFVHFRAIEKDGFKSLKEGEAVTFVAEQGQKG 238
+ RQNGTVKWFNDEKGYGFITP G DLFVHF+AIE DGFKSLKEG+ V+FVAE+GQKG
Sbjct: 2 SNRQNGTVKWFNDEKGYGFITPAGGGDDLFVHFKAIESDGFKSLKEGQTVSFVAEKGQKG 61
Query: 237 MQASSVR 217
MQA+ VR
Sbjct: 62 MQAAQVR 68
>ref|WP_030724054.1| hypothetical protein [Streptomyces sp. NRRL F-2580]
Length = 70
Score = 115 bits (288), Expect = 1e-23
Identities = 52/67 (77%), Positives = 62/67 (92%)
Frame = -3
Query: 417 TERQNGTVKWFNDEKGYGFITPENGSADLFVHFRAIEKDGFKSLKEGEAVTFVAEQGQKG 238
++RQ GTVKWFNDEKG+GFITP++G DLFVHF+AIE +GFKSLKEG+AVTFVAE+GQKG
Sbjct: 2 SDRQTGTVKWFNDEKGFGFITPDSGGDDLFVHFKAIESNGFKSLKEGQAVTFVAERGQKG 61
Query: 237 MQASSVR 217
MQA+ VR
Sbjct: 62 MQAAQVR 68
>ref|WP_023379795.1| MULTISPECIES: cold-shock protein [Pseudomonas]
gi|556074240|gb|AGZ34573.1| cold shock protein capA
[Pseudomonas sp. VLB120]
Length = 70
Score = 115 bits (288), Expect = 1e-23
Identities = 53/67 (79%), Positives = 59/67 (88%)
Frame = -3
Query: 417 TERQNGTVKWFNDEKGYGFITPENGSADLFVHFRAIEKDGFKSLKEGEAVTFVAEQGQKG 238
+ RQNGTVKWFNDEKGYGFITP G DLFVHF+AIE DGFKSLKEG+ V+FVAE+GQKG
Sbjct: 2 SNRQNGTVKWFNDEKGYGFITPAGGGDDLFVHFKAIETDGFKSLKEGQTVSFVAERGQKG 61
Query: 237 MQASSVR 217
MQA+ VR
Sbjct: 62 MQAAQVR 68
>ref|WP_039757645.1| DNA-binding protein [Pseudomonas fluorescens]
gi|747118439|gb|KIF64996.1| DNA-binding protein
[Pseudomonas fluorescens]
Length = 73
Score = 115 bits (287), Expect = 2e-23
Identities = 52/71 (73%), Positives = 63/71 (88%)
Frame = -3
Query: 429 MDASTERQNGTVKWFNDEKGYGFITPENGSADLFVHFRAIEKDGFKSLKEGEAVTFVAEQ 250
M + +R+NGTVKWFNDEKG+GFITP+ G DLFVHF+AIE +GFKSLKEG+AV+F+AEQ
Sbjct: 1 MRITGQRENGTVKWFNDEKGFGFITPQVGGDDLFVHFKAIESEGFKSLKEGQAVSFIAEQ 60
Query: 249 GQKGMQASSVR 217
GQKG+QAS VR
Sbjct: 61 GQKGLQASQVR 71
>emb|CCE31589.1| uncharacterized protein CPUR_05442 [Claviceps purpurea 20.1]
Length = 223
Score = 115 bits (287), Expect = 2e-23
Identities = 54/70 (77%), Positives = 60/70 (85%)
Frame = -3
Query: 426 DASTERQNGTVKWFNDEKGYGFITPENGSADLFVHFRAIEKDGFKSLKEGEAVTFVAEQG 247
D +RQ G VKWFNDEKGYGFITP +G ADLFVHFRAIE GFK+LKEG+AV+FVAEQG
Sbjct: 3 DQQGDRQAGVVKWFNDEKGYGFITPADGGADLFVHFRAIEVQGFKALKEGQAVSFVAEQG 62
Query: 246 QKGMQASSVR 217
QKGMQA+ VR
Sbjct: 63 QKGMQAAQVR 72
>ref|WP_042126302.1| DNA-binding protein [Pseudomonas japonica]
Length = 70
Score = 114 bits (286), Expect = 2e-23
Identities = 52/67 (77%), Positives = 59/67 (88%)
Frame = -3
Query: 417 TERQNGTVKWFNDEKGYGFITPENGSADLFVHFRAIEKDGFKSLKEGEAVTFVAEQGQKG 238
+ RQ GTVKWFNDEKGYGFITP+ G DLFVHF+AIE DGFKSLKEG+ V+FVAE+GQKG
Sbjct: 2 SNRQTGTVKWFNDEKGYGFITPQGGGDDLFVHFKAIESDGFKSLKEGQTVSFVAEKGQKG 61
Query: 237 MQASSVR 217
MQA+ VR
Sbjct: 62 MQAAQVR 68
>ref|WP_038413369.1| DNA-binding protein [Pseudomonas cremoricolorata]
gi|691227450|gb|AIR90734.1| DNA-binding protein
[Pseudomonas cremoricolorata]
Length = 70
Score = 114 bits (286), Expect = 2e-23
Identities = 52/67 (77%), Positives = 59/67 (88%)
Frame = -3
Query: 417 TERQNGTVKWFNDEKGYGFITPENGSADLFVHFRAIEKDGFKSLKEGEAVTFVAEQGQKG 238
+ RQ GTVKWFNDEKGYGFITP+ G DLFVHF+AIE DGFKSLKEG+ V+FVAE+GQKG
Sbjct: 2 SNRQTGTVKWFNDEKGYGFITPQGGGDDLFVHFKAIESDGFKSLKEGQTVSFVAERGQKG 61
Query: 237 MQASSVR 217
MQA+ VR
Sbjct: 62 MQAAQVR 68
>ref|WP_023047412.1| cold-shock protein [Pseudomonas putida] gi|551053579|gb|ERT19307.1|
DNA-binding protein [Pseudomonas putida SJ3]
Length = 70
Score = 114 bits (286), Expect = 2e-23
Identities = 52/67 (77%), Positives = 60/67 (89%)
Frame = -3
Query: 417 TERQNGTVKWFNDEKGYGFITPENGSADLFVHFRAIEKDGFKSLKEGEAVTFVAEQGQKG 238
+ RQNGTVKWFNDEKG+GFITPE G DLFVHF+AIE +GFKSLKEG+ V+FVAE+GQKG
Sbjct: 2 SNRQNGTVKWFNDEKGFGFITPEGGGDDLFVHFKAIESEGFKSLKEGQKVSFVAEKGQKG 61
Query: 237 MQASSVR 217
MQA+ VR
Sbjct: 62 MQAAQVR 68
>ref|WP_032631434.1| DNA-binding protein [Pseudomonas syringae]
gi|670188515|gb|KFE51314.1| DNA-binding protein
[Pseudomonas syringae] gi|873536091|gb|KMT57089.1|
DNA-binding protein [Pseudomonas sp. KG01]
Length = 70
Score = 113 bits (283), Expect = 4e-23
Identities = 51/67 (76%), Positives = 60/67 (89%)
Frame = -3
Query: 417 TERQNGTVKWFNDEKGYGFITPENGSADLFVHFRAIEKDGFKSLKEGEAVTFVAEQGQKG 238
+ RQ+GTVKWFNDEKG+GFITP+ G DLFVHF+AIE DGFKSLKEG+ V+FVAE+GQKG
Sbjct: 2 SNRQSGTVKWFNDEKGFGFITPQGGGDDLFVHFKAIESDGFKSLKEGQTVSFVAEKGQKG 61
Query: 237 MQASSVR 217
MQA+ VR
Sbjct: 62 MQAAQVR 68
>ref|WP_003250656.1| MULTISPECIES: cold-shock protein CspA [Pseudomonas]
gi|26989186|ref|NP_744611.1| cold shock protein CspA
[Pseudomonas putida KT2440]
gi|24984025|gb|AAN68075.1|AE016439_10 cold shock protein
CspA [Pseudomonas putida KT2440]
gi|63034352|gb|AAY28469.1| cold shock protein A-2
[Pseudomonas putida DOT-T1E] gi|148512493|gb|ABQ79353.1|
cold-shock DNA-binding protein family [Pseudomonas
putida F1] gi|313499448|gb|ADR60814.1| Cold shock
protein capa, fragment-related protein [Pseudomonas
putida BIRD-1] gi|324098053|gb|EGB96198.1| DNA-binding
protein [Pseudomonas sp. TJI-51]
gi|338837790|gb|AEJ12595.1| cold shock protein CspA
[Pseudomonas putida S16] gi|388558129|gb|AFK67270.1|
cold shock protein CspA [Pseudomonas putida ND6]
gi|397332900|gb|AFO49259.1| cold shock protein capA
[Pseudomonas putida DOT-T1E] gi|402211223|gb|EJT82702.1|
cold shock protein CspA [Pseudomonas putida S11]
gi|430792712|gb|AGA72907.1| cold shock protein CspA
[Pseudomonas putida HB3267] gi|471349606|gb|EMR47567.1|
cold shock protein CspA [Pseudomonas putida LS46]
gi|480586613|gb|ENY79456.1| cold shock protein CspA
[Pseudomonas putida TRO1] gi|544279115|gb|ERL01681.1|
cold-shock protein [Pseudomonas putida LF54]
gi|562740707|gb|ESW37903.1| cold-shock protein
[Pseudomonas taiwanensis SJ9]
gi|567349795|gb|AHC81992.1| cold-shock protein
[Pseudomonas monteilii SB3078]
gi|567357381|gb|AHC87369.1| cold-shock protein
[Pseudomonas monteilii SB3101]
gi|568239240|gb|AHD13962.1| cold-shock protein
[Pseudomonas sp. FGI182] gi|635294056|gb|AHZ76798.1|
cold shock protein CspA [Pseudomonas putida]
gi|694932620|gb|KGK25065.1| DNA-binding protein
[Pseudomonas plecoglossicida]
gi|734578240|gb|AJA15454.1| DNA-binding protein
[Pseudomonas putida S12] gi|742786976|gb|KIC79447.1|
DNA-binding protein [Pseudomonas sp. C5pp]
gi|752311846|gb|AJG14455.1| cold shock protein CspA
[Pseudomonas plecoglossicida]
gi|761893385|gb|KIY40739.1| DNA-binding protein
[Pseudomonas sp. 10-1B] gi|816873524|gb|KKO17133.1|
DNA-binding protein [Pseudomonas putida KG-4]
gi|881608189|gb|KMU95055.1| DNA-binding protein
[Pseudomonas putida]
Length = 70
Score = 113 bits (283), Expect = 4e-23
Identities = 52/67 (77%), Positives = 58/67 (86%)
Frame = -3
Query: 417 TERQNGTVKWFNDEKGYGFITPENGSADLFVHFRAIEKDGFKSLKEGEAVTFVAEQGQKG 238
+ RQ GTVKWFNDEKGYGFITP G DLFVHF+AIE DGFKSLKEG+ V+FVAE+GQKG
Sbjct: 2 SNRQQGTVKWFNDEKGYGFITPAGGGDDLFVHFKAIESDGFKSLKEGQTVSFVAERGQKG 61
Query: 237 MQASSVR 217
MQA+ VR
Sbjct: 62 MQAAQVR 68
>ref|WP_017132437.1| cold-shock protein [Pseudomonas agarici]
Length = 70
Score = 113 bits (283), Expect = 4e-23
Identities = 51/67 (76%), Positives = 60/67 (89%)
Frame = -3
Query: 417 TERQNGTVKWFNDEKGYGFITPENGSADLFVHFRAIEKDGFKSLKEGEAVTFVAEQGQKG 238
+ RQ GTVKWFNDEKG+GFITP+ G DLFVHF+AIE DGFKSLKEG++V+FVAE+GQKG
Sbjct: 2 SNRQTGTVKWFNDEKGFGFITPQGGGDDLFVHFKAIESDGFKSLKEGQSVSFVAEKGQKG 61
Query: 237 MQASSVR 217
MQA+ VR
Sbjct: 62 MQAAQVR 68
>ref|WP_012313861.1| MULTISPECIES: cold-shock protein [Pseudomonas]
gi|169759152|gb|ACA72468.1| cold-shock DNA-binding
domain protein [Pseudomonas putida W619]
gi|730588110|gb|AIZ32493.1| DNA-binding protein
[Pseudomonas parafulva] gi|733474817|gb|KHL75230.1|
DNA-binding protein [Pseudomonas putida]
Length = 70
Score = 113 bits (283), Expect = 4e-23
Identities = 52/67 (77%), Positives = 58/67 (86%)
Frame = -3
Query: 417 TERQNGTVKWFNDEKGYGFITPENGSADLFVHFRAIEKDGFKSLKEGEAVTFVAEQGQKG 238
+ RQ GTVKWFNDEKGYGFITP G DLFVHF+AIE DGFKSLKEG+ V+FVAE+GQKG
Sbjct: 2 SNRQQGTVKWFNDEKGYGFITPAGGGDDLFVHFKAIESDGFKSLKEGQTVSFVAEKGQKG 61
Query: 237 MQASSVR 217
MQA+ VR
Sbjct: 62 MQAAQVR 68
>gb|EFQ62339.1| cold shock protein (beta-ribbon, CspA family) [Pseudomonas
fluorescens WH6]
Length = 91
Score = 113 bits (282), Expect = 6e-23
Identities = 51/67 (76%), Positives = 59/67 (88%)
Frame = -3
Query: 417 TERQNGTVKWFNDEKGYGFITPENGSADLFVHFRAIEKDGFKSLKEGEAVTFVAEQGQKG 238
+ RQ GTVKWFNDEKG+GFITP+ G DLFVHF+AIE DGFKSLKEG+ V+FVAE+GQKG
Sbjct: 23 SNRQTGTVKWFNDEKGFGFITPQGGGDDLFVHFKAIESDGFKSLKEGQTVSFVAEKGQKG 82
Query: 237 MQASSVR 217
MQA+ VR
Sbjct: 83 MQAAQVR 89
>ref|WP_016499620.1| cold-shock protein [Pseudomonas putida]
gi|512383550|dbj|BAN54400.1| putative cold shock protein
[Pseudomonas putida NBRC 14164]
gi|764073786|gb|AJQ47218.1| DNA-binding protein
[Pseudomonas putida S13.1.2]
Length = 70
Score = 113 bits (282), Expect = 6e-23
Identities = 51/67 (76%), Positives = 60/67 (89%)
Frame = -3
Query: 417 TERQNGTVKWFNDEKGYGFITPENGSADLFVHFRAIEKDGFKSLKEGEAVTFVAEQGQKG 238
+ RQ+GTVKWFNDEKG+GFITP+ G DLFVHF+AIE DGFKSLKEG+ V+FVAE+GQKG
Sbjct: 2 SNRQSGTVKWFNDEKGFGFITPDGGGDDLFVHFKAIESDGFKSLKEGQKVSFVAEKGQKG 61
Query: 237 MQASSVR 217
MQA+ VR
Sbjct: 62 MQAAQVR 68
>gb|AFY20585.1| cold shock protein CapA [Pseudomonas sp. UW4]
Length = 91
Score = 113 bits (282), Expect = 6e-23
Identities = 51/67 (76%), Positives = 59/67 (88%)
Frame = -3
Query: 417 TERQNGTVKWFNDEKGYGFITPENGSADLFVHFRAIEKDGFKSLKEGEAVTFVAEQGQKG 238
+ RQ GTVKWFNDEKG+GFITP+ G DLFVHF+AIE DGFKSLKEG+ V+FVAE+GQKG
Sbjct: 23 SNRQTGTVKWFNDEKGFGFITPQGGGDDLFVHFKAIESDGFKSLKEGQTVSFVAEKGQKG 82
Query: 237 MQASSVR 217
MQA+ VR
Sbjct: 83 MQAAQVR 89
>ref|WP_007905882.1| MULTISPECIES: cold-shock protein [Pseudomonas]
gi|398105513|gb|EJL95604.1| cold shock protein
[Pseudomonas sp. GM102] gi|398181324|gb|EJM68894.1| cold
shock protein [Pseudomonas sp. GM50]
gi|515437211|gb|EPJ85431.1| cold shock protein capa
[Pseudomonas sp. CFII68] gi|515439410|gb|EPJ87598.1|
cold shock protein capa [Pseudomonas sp. CFII64]
gi|567643860|gb|ETK19241.1| cold shock protein CapA
[Pseudomonas sp. FH4] gi|576706324|gb|EUB72761.1|
cold-shock DNA-binding domain protein [Pseudomonas sp.
GM41(2012)] gi|633675765|gb|KDD65365.1| cold-shock
protein [Pseudomonas mandelii PD30]
gi|635290011|gb|AHZ72756.1| cold shock protein capa
[Pseudomonas mandelii JR-1] gi|666086062|gb|AIG01982.1|
DNA-binding protein [Pseudomonas fluorescens]
gi|691204613|gb|KGF65607.1| DNA-binding protein
[Pseudomonas lutea] gi|799194688|gb|KJZ39655.1|
DNA-binding protein [Pseudomonas fluorescens]
gi|799196692|gb|KJZ41637.1| DNA-binding protein
[Pseudomonas fluorescens] gi|799215894|gb|KJZ60398.1|
DNA-binding protein [Pseudomonas fluorescens]
gi|856774992|gb|KMM93384.1| DNA-binding protein
[Pseudomonas lini]
Length = 70
Score = 113 bits (282), Expect = 6e-23
Identities = 51/67 (76%), Positives = 59/67 (88%)
Frame = -3
Query: 417 TERQNGTVKWFNDEKGYGFITPENGSADLFVHFRAIEKDGFKSLKEGEAVTFVAEQGQKG 238
+ RQ GTVKWFNDEKG+GFITP+ G DLFVHF+AIE DGFKSLKEG+ V+FVAE+GQKG
Sbjct: 2 SNRQTGTVKWFNDEKGFGFITPQGGGDDLFVHFKAIESDGFKSLKEGQTVSFVAEKGQKG 61
Query: 237 MQASSVR 217
MQA+ VR
Sbjct: 62 MQAAQVR 68