BLASTX nr result
ID: Forsythia23_contig00012962
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Forsythia23_contig00012962 (329 letters) Database: ./nr 69,698,275 sequences; 24,982,196,650 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CDP11022.1| unnamed protein product [Coffea canephora] 61 3e-07 ref|XP_011075302.1| PREDICTED: photosystem II stability/assembly... 58 2e-06 ref|XP_011075300.1| PREDICTED: photosystem II stability/assembly... 58 2e-06 ref|XP_009613611.1| PREDICTED: photosystem II stability/assembly... 57 6e-06 >emb|CDP11022.1| unnamed protein product [Coffea canephora] Length = 411 Score = 60.8 bits (146), Expect = 3e-07 Identities = 30/45 (66%), Positives = 36/45 (80%) Frame = -2 Query: 136 SAVAISLSPFVGGGKNGSALAAEEPLSEWERVFLPIDPGVVLLDI 2 +A A++ S F+ GG N + AAEE LSEWERV+LPIDPGVVLLDI Sbjct: 65 AAAAVTASGFLIGGGNKAFAAAEEGLSEWERVYLPIDPGVVLLDI 109 >ref|XP_011075302.1| PREDICTED: photosystem II stability/assembly factor HCF136, chloroplastic isoform X2 [Sesamum indicum] Length = 346 Score = 58.2 bits (139), Expect = 2e-06 Identities = 30/45 (66%), Positives = 34/45 (75%) Frame = -2 Query: 136 SAVAISLSPFVGGGKNGSALAAEEPLSEWERVFLPIDPGVVLLDI 2 +A A+SLSP ALAA+EPLSEWER +LPIDPGVVLLDI Sbjct: 62 AAAAVSLSPL-----GSKALAADEPLSEWERGYLPIDPGVVLLDI 101 >ref|XP_011075300.1| PREDICTED: photosystem II stability/assembly factor HCF136, chloroplastic isoform X1 [Sesamum indicum] gi|747057952|ref|XP_011075301.1| PREDICTED: photosystem II stability/assembly factor HCF136, chloroplastic isoform X1 [Sesamum indicum] Length = 403 Score = 58.2 bits (139), Expect = 2e-06 Identities = 30/45 (66%), Positives = 34/45 (75%) Frame = -2 Query: 136 SAVAISLSPFVGGGKNGSALAAEEPLSEWERVFLPIDPGVVLLDI 2 +A A+SLSP ALAA+EPLSEWER +LPIDPGVVLLDI Sbjct: 62 AAAAVSLSPL-----GSKALAADEPLSEWERGYLPIDPGVVLLDI 101 >ref|XP_009613611.1| PREDICTED: photosystem II stability/assembly factor HCF136, chloroplastic [Nicotiana tomentosiformis] gi|697119327|ref|XP_009613612.1| PREDICTED: photosystem II stability/assembly factor HCF136, chloroplastic [Nicotiana tomentosiformis] Length = 399 Score = 56.6 bits (135), Expect = 6e-06 Identities = 29/46 (63%), Positives = 35/46 (76%), Gaps = 1/46 (2%) Frame = -2 Query: 136 SAVAISLSPFVGGGKNGSALAAEE-PLSEWERVFLPIDPGVVLLDI 2 +A AI+L P +G G + A+E PLSEWERV+LPIDPGVVLLDI Sbjct: 52 TAAAIALPPLLGAGISPIPAKADEVPLSEWERVYLPIDPGVVLLDI 97