BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia23_contig00011295
         (2001 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010258902.1| PREDICTED: CCR4-NOT transcription complex su...   634   0.0  
ref|XP_010258908.1| PREDICTED: CCR4-NOT transcription complex su...   634   0.0  
ref|XP_010258901.1| PREDICTED: CCR4-NOT transcription complex su...   634   0.0  
ref|XP_010258903.1| PREDICTED: CCR4-NOT transcription complex su...   634   0.0  
ref|XP_010258906.1| PREDICTED: CCR4-NOT transcription complex su...   634   0.0  
ref|XP_010258905.1| PREDICTED: CCR4-NOT transcription complex su...   634   0.0  
ref|XP_010258907.1| PREDICTED: CCR4-NOT transcription complex su...   634   0.0  
ref|XP_012489728.1| PREDICTED: CCR4-NOT transcription complex su...   608   0.0  
ref|XP_012489727.1| PREDICTED: CCR4-NOT transcription complex su...   608   0.0  
ref|XP_012489729.1| PREDICTED: CCR4-NOT transcription complex su...   608   0.0  
ref|XP_012489730.1| PREDICTED: CCR4-NOT transcription complex su...   608   0.0  
gb|KJB41042.1| hypothetical protein B456_007G0881001, partial [G...   608   0.0  
gb|KJB41046.1| hypothetical protein B456_007G0881001, partial [G...   608   0.0  
ref|XP_012083636.1| PREDICTED: CCR4-NOT transcription complex su...   610   0.0  
ref|XP_009348858.1| PREDICTED: CCR4-NOT transcription complex su...   609   0.0  
ref|XP_009348857.1| PREDICTED: CCR4-NOT transcription complex su...   609   0.0  
ref|XP_009348859.1| PREDICTED: CCR4-NOT transcription complex su...   609   0.0  
ref|XP_010258904.1| PREDICTED: CCR4-NOT transcription complex su...   634   0.0  
ref|XP_006445335.1| hypothetical protein CICLE_v10018430mg [Citr...   598   0.0  
ref|XP_006445333.1| hypothetical protein CICLE_v10018430mg [Citr...   598   0.0  

>ref|XP_010258902.1| PREDICTED: CCR4-NOT transcription complex subunit 1 isoform X2
            [Nelumbo nucifera]
          Length = 2452

 Score =  634 bits (1634), Expect(2) = 0.0
 Identities = 312/382 (81%), Positives = 337/382 (88%), Gaps = 4/382 (1%)
 Frame = -2

Query: 1259 F*VLTALANAFHALQPLKIPGFSFAWLELISHRGFMPKLLTANAQKGWPYFQRLLVDLFQ 1080
            F VLTA ANAFHALQPLK+PGFSFAWLEL+SHR +MPKLLT N QKGWP+ QRLLVDLF+
Sbjct: 2071 FQVLTAFANAFHALQPLKVPGFSFAWLELVSHRSYMPKLLTLNLQKGWPFVQRLLVDLFK 2130

Query: 1079 FMEPFLRNAELGESVQFLYKGTLRVLLVLLHDFPEFLCDYHFSFCDVIPPSCIQMRSIIL 900
            F+EP+LRNAELGE V FLYKGTLRVLLVLLHDFPEFLCDYHFSFCDVIPPSCIQMR++IL
Sbjct: 2131 FLEPYLRNAELGEPVHFLYKGTLRVLLVLLHDFPEFLCDYHFSFCDVIPPSCIQMRNVIL 2190

Query: 899  SAFPRNMRLPDPSTPNLKIDLLAEINQAPHILSEVDAALKAKQIKGDVDEYLKTRQQGXX 720
            SAFPRNMRLPDPSTPNLKIDLLAEI+Q+P ILSEVD ALK K +KGD+DEYLKTRQQG  
Sbjct: 2191 SAFPRNMRLPDPSTPNLKIDLLAEISQSPRILSEVDTALKGKLMKGDIDEYLKTRQQGSS 2250

Query: 719  XXXXXXXXXXXXXSDAAHAGTRYNVPLINSLVLYVGMQAIQQLQARAPQ-HSQSI---AS 552
                          +AA AGTRYNVPLINSLVLYVGMQAIQQLQA+ P  H+  +   AS
Sbjct: 2251 FLAELKQRLLLSQGEAAQAGTRYNVPLINSLVLYVGMQAIQQLQAKTPSPHAPPMAQGAS 2310

Query: 551  MTLFLVSAALDIFQTMIMDLDSEGRYLFLNAVANQLRYPNNHTHYFSFILLYLFAETNQE 372
            M +FLV AA+DIFQT+I DLD+EGRYLFLNAVANQLRYPNNHTHYFSF+LLYLFAETNQE
Sbjct: 2311 MDIFLVGAAMDIFQTLIADLDTEGRYLFLNAVANQLRYPNNHTHYFSFVLLYLFAETNQE 2370

Query: 371  IIQEQITRVLLERLVVNRPHPWGLLITFIELIKNPRYNFWSRSFTRCAPEIEKLFESVSR 192
            IIQEQITRVLLERL+VNRPHPWGLLITFIELIKNPRYNFW+RSFTRCAPEIEKLFESVSR
Sbjct: 2371 IIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPRYNFWNRSFTRCAPEIEKLFESVSR 2430

Query: 191  SCGGPKPADDGVGSGGIPDNMH 126
            SCGGPKP DD + SGGI DN H
Sbjct: 2431 SCGGPKPLDDAMVSGGISDNAH 2452



 Score =  313 bits (803), Expect(2) = 0.0
 Identities = 163/246 (66%), Positives = 188/246 (76%), Gaps = 1/246 (0%)
 Frame = -1

Query: 2001 ELHNLVDALAKLAARPGSPESLQQLVEIAKNPSGNSAALSGLSVGKDDNNTSSSDEKATG 1822
            ELHNLVDALAKLA RPGSPESLQQLVEIA+NP+ NSAALSGL+VGKDD    S D+K   
Sbjct: 1835 ELHNLVDALAKLAMRPGSPESLQQLVEIARNPASNSAALSGLAVGKDDKARQSRDKKVPS 1894

Query: 1821 VTGVS-REDYTEAELVEPDPAAFREQVSALFVEWYQICELPGANDSACARYVLHLQQRGL 1645
               +S REDY  AE    DPA FREQVS LF EWY+ICELPG ND+A   Y+  LQQ GL
Sbjct: 1895 GRSMSGREDYNNAESAA-DPAGFREQVSVLFAEWYRICELPGTNDAAYTHYISQLQQNGL 1953

Query: 1644 LKGDDTSDRFFLLLMEISVSHCLSSEVINSGPSQSHQGQPLSFLAIDIYAKLVFSILKFC 1465
            LK DD SDRFF +L E+SV+HCLSSE + S      Q Q LSF+AID+YAKLV  I K+C
Sbjct: 1954 LKADDMSDRFFRILTELSVAHCLSSESLQS----PQQLQHLSFIAIDMYAKLVVLIFKYC 2009

Query: 1464 SIDEGSGKLSLLPKVLAVIVKFIQKDADEKRTSFNPRPYFRIFINWILDLCFLDPVFDGA 1285
             +D+GS KL LLPK+LAV V+ IQKDA+EK+ SFNPRPYFR+FINW+LDL   DP+ DG+
Sbjct: 2010 VVDQGSSKLLLLPKILAVTVRVIQKDAEEKKASFNPRPYFRLFINWLLDLGSPDPLLDGS 2069

Query: 1284 NFQFLT 1267
            NFQ LT
Sbjct: 2070 NFQVLT 2075


>ref|XP_010258908.1| PREDICTED: CCR4-NOT transcription complex subunit 1 isoform X8
            [Nelumbo nucifera]
          Length = 2437

 Score =  634 bits (1634), Expect(2) = 0.0
 Identities = 312/382 (81%), Positives = 337/382 (88%), Gaps = 4/382 (1%)
 Frame = -2

Query: 1259 F*VLTALANAFHALQPLKIPGFSFAWLELISHRGFMPKLLTANAQKGWPYFQRLLVDLFQ 1080
            F VLTA ANAFHALQPLK+PGFSFAWLEL+SHR +MPKLLT N QKGWP+ QRLLVDLF+
Sbjct: 2056 FQVLTAFANAFHALQPLKVPGFSFAWLELVSHRSYMPKLLTLNLQKGWPFVQRLLVDLFK 2115

Query: 1079 FMEPFLRNAELGESVQFLYKGTLRVLLVLLHDFPEFLCDYHFSFCDVIPPSCIQMRSIIL 900
            F+EP+LRNAELGE V FLYKGTLRVLLVLLHDFPEFLCDYHFSFCDVIPPSCIQMR++IL
Sbjct: 2116 FLEPYLRNAELGEPVHFLYKGTLRVLLVLLHDFPEFLCDYHFSFCDVIPPSCIQMRNVIL 2175

Query: 899  SAFPRNMRLPDPSTPNLKIDLLAEINQAPHILSEVDAALKAKQIKGDVDEYLKTRQQGXX 720
            SAFPRNMRLPDPSTPNLKIDLLAEI+Q+P ILSEVD ALK K +KGD+DEYLKTRQQG  
Sbjct: 2176 SAFPRNMRLPDPSTPNLKIDLLAEISQSPRILSEVDTALKGKLMKGDIDEYLKTRQQGSS 2235

Query: 719  XXXXXXXXXXXXXSDAAHAGTRYNVPLINSLVLYVGMQAIQQLQARAPQ-HSQSI---AS 552
                          +AA AGTRYNVPLINSLVLYVGMQAIQQLQA+ P  H+  +   AS
Sbjct: 2236 FLAELKQRLLLSQGEAAQAGTRYNVPLINSLVLYVGMQAIQQLQAKTPSPHAPPMAQGAS 2295

Query: 551  MTLFLVSAALDIFQTMIMDLDSEGRYLFLNAVANQLRYPNNHTHYFSFILLYLFAETNQE 372
            M +FLV AA+DIFQT+I DLD+EGRYLFLNAVANQLRYPNNHTHYFSF+LLYLFAETNQE
Sbjct: 2296 MDIFLVGAAMDIFQTLIADLDTEGRYLFLNAVANQLRYPNNHTHYFSFVLLYLFAETNQE 2355

Query: 371  IIQEQITRVLLERLVVNRPHPWGLLITFIELIKNPRYNFWSRSFTRCAPEIEKLFESVSR 192
            IIQEQITRVLLERL+VNRPHPWGLLITFIELIKNPRYNFW+RSFTRCAPEIEKLFESVSR
Sbjct: 2356 IIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPRYNFWNRSFTRCAPEIEKLFESVSR 2415

Query: 191  SCGGPKPADDGVGSGGIPDNMH 126
            SCGGPKP DD + SGGI DN H
Sbjct: 2416 SCGGPKPLDDAMVSGGISDNAH 2437



 Score =  313 bits (803), Expect(2) = 0.0
 Identities = 163/246 (66%), Positives = 188/246 (76%), Gaps = 1/246 (0%)
 Frame = -1

Query: 2001 ELHNLVDALAKLAARPGSPESLQQLVEIAKNPSGNSAALSGLSVGKDDNNTSSSDEKATG 1822
            ELHNLVDALAKLA RPGSPESLQQLVEIA+NP+ NSAALSGL+VGKDD    S D+K   
Sbjct: 1820 ELHNLVDALAKLAMRPGSPESLQQLVEIARNPASNSAALSGLAVGKDDKARQSRDKKVPS 1879

Query: 1821 VTGVS-REDYTEAELVEPDPAAFREQVSALFVEWYQICELPGANDSACARYVLHLQQRGL 1645
               +S REDY  AE    DPA FREQVS LF EWY+ICELPG ND+A   Y+  LQQ GL
Sbjct: 1880 GRSMSGREDYNNAESAA-DPAGFREQVSVLFAEWYRICELPGTNDAAYTHYISQLQQNGL 1938

Query: 1644 LKGDDTSDRFFLLLMEISVSHCLSSEVINSGPSQSHQGQPLSFLAIDIYAKLVFSILKFC 1465
            LK DD SDRFF +L E+SV+HCLSSE + S      Q Q LSF+AID+YAKLV  I K+C
Sbjct: 1939 LKADDMSDRFFRILTELSVAHCLSSESLQS----PQQLQHLSFIAIDMYAKLVVLIFKYC 1994

Query: 1464 SIDEGSGKLSLLPKVLAVIVKFIQKDADEKRTSFNPRPYFRIFINWILDLCFLDPVFDGA 1285
             +D+GS KL LLPK+LAV V+ IQKDA+EK+ SFNPRPYFR+FINW+LDL   DP+ DG+
Sbjct: 1995 VVDQGSSKLLLLPKILAVTVRVIQKDAEEKKASFNPRPYFRLFINWLLDLGSPDPLLDGS 2054

Query: 1284 NFQFLT 1267
            NFQ LT
Sbjct: 2055 NFQVLT 2060


>ref|XP_010258901.1| PREDICTED: CCR4-NOT transcription complex subunit 1 isoform X1
            [Nelumbo nucifera]
          Length = 2454

 Score =  634 bits (1634), Expect(2) = 0.0
 Identities = 312/382 (81%), Positives = 337/382 (88%), Gaps = 4/382 (1%)
 Frame = -2

Query: 1259 F*VLTALANAFHALQPLKIPGFSFAWLELISHRGFMPKLLTANAQKGWPYFQRLLVDLFQ 1080
            F VLTA ANAFHALQPLK+PGFSFAWLEL+SHR +MPKLLT N QKGWP+ QRLLVDLF+
Sbjct: 2073 FQVLTAFANAFHALQPLKVPGFSFAWLELVSHRSYMPKLLTLNLQKGWPFVQRLLVDLFK 2132

Query: 1079 FMEPFLRNAELGESVQFLYKGTLRVLLVLLHDFPEFLCDYHFSFCDVIPPSCIQMRSIIL 900
            F+EP+LRNAELGE V FLYKGTLRVLLVLLHDFPEFLCDYHFSFCDVIPPSCIQMR++IL
Sbjct: 2133 FLEPYLRNAELGEPVHFLYKGTLRVLLVLLHDFPEFLCDYHFSFCDVIPPSCIQMRNVIL 2192

Query: 899  SAFPRNMRLPDPSTPNLKIDLLAEINQAPHILSEVDAALKAKQIKGDVDEYLKTRQQGXX 720
            SAFPRNMRLPDPSTPNLKIDLLAEI+Q+P ILSEVD ALK K +KGD+DEYLKTRQQG  
Sbjct: 2193 SAFPRNMRLPDPSTPNLKIDLLAEISQSPRILSEVDTALKGKLMKGDIDEYLKTRQQGSS 2252

Query: 719  XXXXXXXXXXXXXSDAAHAGTRYNVPLINSLVLYVGMQAIQQLQARAPQ-HSQSI---AS 552
                          +AA AGTRYNVPLINSLVLYVGMQAIQQLQA+ P  H+  +   AS
Sbjct: 2253 FLAELKQRLLLSQGEAAQAGTRYNVPLINSLVLYVGMQAIQQLQAKTPSPHAPPMAQGAS 2312

Query: 551  MTLFLVSAALDIFQTMIMDLDSEGRYLFLNAVANQLRYPNNHTHYFSFILLYLFAETNQE 372
            M +FLV AA+DIFQT+I DLD+EGRYLFLNAVANQLRYPNNHTHYFSF+LLYLFAETNQE
Sbjct: 2313 MDIFLVGAAMDIFQTLIADLDTEGRYLFLNAVANQLRYPNNHTHYFSFVLLYLFAETNQE 2372

Query: 371  IIQEQITRVLLERLVVNRPHPWGLLITFIELIKNPRYNFWSRSFTRCAPEIEKLFESVSR 192
            IIQEQITRVLLERL+VNRPHPWGLLITFIELIKNPRYNFW+RSFTRCAPEIEKLFESVSR
Sbjct: 2373 IIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPRYNFWNRSFTRCAPEIEKLFESVSR 2432

Query: 191  SCGGPKPADDGVGSGGIPDNMH 126
            SCGGPKP DD + SGGI DN H
Sbjct: 2433 SCGGPKPLDDAMVSGGISDNAH 2454



 Score =  308 bits (790), Expect(2) = 0.0
 Identities = 163/248 (65%), Positives = 188/248 (75%), Gaps = 3/248 (1%)
 Frame = -1

Query: 2001 ELHNLVDALAK--LAARPGSPESLQQLVEIAKNPSGNSAALSGLSVGKDDNNTSSSDEKA 1828
            ELHNLVDALAK  LA RPGSPESLQQLVEIA+NP+ NSAALSGL+VGKDD    S D+K 
Sbjct: 1835 ELHNLVDALAKFQLAMRPGSPESLQQLVEIARNPASNSAALSGLAVGKDDKARQSRDKKV 1894

Query: 1827 TGVTGVS-REDYTEAELVEPDPAAFREQVSALFVEWYQICELPGANDSACARYVLHLQQR 1651
                 +S REDY  AE    DPA FREQVS LF EWY+ICELPG ND+A   Y+  LQQ 
Sbjct: 1895 PSGRSMSGREDYNNAESAA-DPAGFREQVSVLFAEWYRICELPGTNDAAYTHYISQLQQN 1953

Query: 1650 GLLKGDDTSDRFFLLLMEISVSHCLSSEVINSGPSQSHQGQPLSFLAIDIYAKLVFSILK 1471
            GLLK DD SDRFF +L E+SV+HCLSSE + S      Q Q LSF+AID+YAKLV  I K
Sbjct: 1954 GLLKADDMSDRFFRILTELSVAHCLSSESLQS----PQQLQHLSFIAIDMYAKLVVLIFK 2009

Query: 1470 FCSIDEGSGKLSLLPKVLAVIVKFIQKDADEKRTSFNPRPYFRIFINWILDLCFLDPVFD 1291
            +C +D+GS KL LLPK+LAV V+ IQKDA+EK+ SFNPRPYFR+FINW+LDL   DP+ D
Sbjct: 2010 YCVVDQGSSKLLLLPKILAVTVRVIQKDAEEKKASFNPRPYFRLFINWLLDLGSPDPLLD 2069

Query: 1290 GANFQFLT 1267
            G+NFQ LT
Sbjct: 2070 GSNFQVLT 2077


>ref|XP_010258903.1| PREDICTED: CCR4-NOT transcription complex subunit 1 isoform X3
            [Nelumbo nucifera]
          Length = 2451

 Score =  634 bits (1634), Expect(2) = 0.0
 Identities = 312/382 (81%), Positives = 337/382 (88%), Gaps = 4/382 (1%)
 Frame = -2

Query: 1259 F*VLTALANAFHALQPLKIPGFSFAWLELISHRGFMPKLLTANAQKGWPYFQRLLVDLFQ 1080
            F VLTA ANAFHALQPLK+PGFSFAWLEL+SHR +MPKLLT N QKGWP+ QRLLVDLF+
Sbjct: 2070 FQVLTAFANAFHALQPLKVPGFSFAWLELVSHRSYMPKLLTLNLQKGWPFVQRLLVDLFK 2129

Query: 1079 FMEPFLRNAELGESVQFLYKGTLRVLLVLLHDFPEFLCDYHFSFCDVIPPSCIQMRSIIL 900
            F+EP+LRNAELGE V FLYKGTLRVLLVLLHDFPEFLCDYHFSFCDVIPPSCIQMR++IL
Sbjct: 2130 FLEPYLRNAELGEPVHFLYKGTLRVLLVLLHDFPEFLCDYHFSFCDVIPPSCIQMRNVIL 2189

Query: 899  SAFPRNMRLPDPSTPNLKIDLLAEINQAPHILSEVDAALKAKQIKGDVDEYLKTRQQGXX 720
            SAFPRNMRLPDPSTPNLKIDLLAEI+Q+P ILSEVD ALK K +KGD+DEYLKTRQQG  
Sbjct: 2190 SAFPRNMRLPDPSTPNLKIDLLAEISQSPRILSEVDTALKGKLMKGDIDEYLKTRQQGSS 2249

Query: 719  XXXXXXXXXXXXXSDAAHAGTRYNVPLINSLVLYVGMQAIQQLQARAPQ-HSQSI---AS 552
                          +AA AGTRYNVPLINSLVLYVGMQAIQQLQA+ P  H+  +   AS
Sbjct: 2250 FLAELKQRLLLSQGEAAQAGTRYNVPLINSLVLYVGMQAIQQLQAKTPSPHAPPMAQGAS 2309

Query: 551  MTLFLVSAALDIFQTMIMDLDSEGRYLFLNAVANQLRYPNNHTHYFSFILLYLFAETNQE 372
            M +FLV AA+DIFQT+I DLD+EGRYLFLNAVANQLRYPNNHTHYFSF+LLYLFAETNQE
Sbjct: 2310 MDIFLVGAAMDIFQTLIADLDTEGRYLFLNAVANQLRYPNNHTHYFSFVLLYLFAETNQE 2369

Query: 371  IIQEQITRVLLERLVVNRPHPWGLLITFIELIKNPRYNFWSRSFTRCAPEIEKLFESVSR 192
            IIQEQITRVLLERL+VNRPHPWGLLITFIELIKNPRYNFW+RSFTRCAPEIEKLFESVSR
Sbjct: 2370 IIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPRYNFWNRSFTRCAPEIEKLFESVSR 2429

Query: 191  SCGGPKPADDGVGSGGIPDNMH 126
            SCGGPKP DD + SGGI DN H
Sbjct: 2430 SCGGPKPLDDAMVSGGISDNAH 2451



 Score =  308 bits (790), Expect(2) = 0.0
 Identities = 163/248 (65%), Positives = 188/248 (75%), Gaps = 3/248 (1%)
 Frame = -1

Query: 2001 ELHNLVDALAK--LAARPGSPESLQQLVEIAKNPSGNSAALSGLSVGKDDNNTSSSDEKA 1828
            ELHNLVDALAK  LA RPGSPESLQQLVEIA+NP+ NSAALSGL+VGKDD    S D+K 
Sbjct: 1832 ELHNLVDALAKFQLAMRPGSPESLQQLVEIARNPASNSAALSGLAVGKDDKARQSRDKKV 1891

Query: 1827 TGVTGVS-REDYTEAELVEPDPAAFREQVSALFVEWYQICELPGANDSACARYVLHLQQR 1651
                 +S REDY  AE    DPA FREQVS LF EWY+ICELPG ND+A   Y+  LQQ 
Sbjct: 1892 PSGRSMSGREDYNNAESAA-DPAGFREQVSVLFAEWYRICELPGTNDAAYTHYISQLQQN 1950

Query: 1650 GLLKGDDTSDRFFLLLMEISVSHCLSSEVINSGPSQSHQGQPLSFLAIDIYAKLVFSILK 1471
            GLLK DD SDRFF +L E+SV+HCLSSE + S      Q Q LSF+AID+YAKLV  I K
Sbjct: 1951 GLLKADDMSDRFFRILTELSVAHCLSSESLQS----PQQLQHLSFIAIDMYAKLVVLIFK 2006

Query: 1470 FCSIDEGSGKLSLLPKVLAVIVKFIQKDADEKRTSFNPRPYFRIFINWILDLCFLDPVFD 1291
            +C +D+GS KL LLPK+LAV V+ IQKDA+EK+ SFNPRPYFR+FINW+LDL   DP+ D
Sbjct: 2007 YCVVDQGSSKLLLLPKILAVTVRVIQKDAEEKKASFNPRPYFRLFINWLLDLGSPDPLLD 2066

Query: 1290 GANFQFLT 1267
            G+NFQ LT
Sbjct: 2067 GSNFQVLT 2074


>ref|XP_010258906.1| PREDICTED: CCR4-NOT transcription complex subunit 1 isoform X6
            [Nelumbo nucifera]
          Length = 2446

 Score =  634 bits (1634), Expect(2) = 0.0
 Identities = 312/382 (81%), Positives = 337/382 (88%), Gaps = 4/382 (1%)
 Frame = -2

Query: 1259 F*VLTALANAFHALQPLKIPGFSFAWLELISHRGFMPKLLTANAQKGWPYFQRLLVDLFQ 1080
            F VLTA ANAFHALQPLK+PGFSFAWLEL+SHR +MPKLLT N QKGWP+ QRLLVDLF+
Sbjct: 2065 FQVLTAFANAFHALQPLKVPGFSFAWLELVSHRSYMPKLLTLNLQKGWPFVQRLLVDLFK 2124

Query: 1079 FMEPFLRNAELGESVQFLYKGTLRVLLVLLHDFPEFLCDYHFSFCDVIPPSCIQMRSIIL 900
            F+EP+LRNAELGE V FLYKGTLRVLLVLLHDFPEFLCDYHFSFCDVIPPSCIQMR++IL
Sbjct: 2125 FLEPYLRNAELGEPVHFLYKGTLRVLLVLLHDFPEFLCDYHFSFCDVIPPSCIQMRNVIL 2184

Query: 899  SAFPRNMRLPDPSTPNLKIDLLAEINQAPHILSEVDAALKAKQIKGDVDEYLKTRQQGXX 720
            SAFPRNMRLPDPSTPNLKIDLLAEI+Q+P ILSEVD ALK K +KGD+DEYLKTRQQG  
Sbjct: 2185 SAFPRNMRLPDPSTPNLKIDLLAEISQSPRILSEVDTALKGKLMKGDIDEYLKTRQQGSS 2244

Query: 719  XXXXXXXXXXXXXSDAAHAGTRYNVPLINSLVLYVGMQAIQQLQARAPQ-HSQSI---AS 552
                          +AA AGTRYNVPLINSLVLYVGMQAIQQLQA+ P  H+  +   AS
Sbjct: 2245 FLAELKQRLLLSQGEAAQAGTRYNVPLINSLVLYVGMQAIQQLQAKTPSPHAPPMAQGAS 2304

Query: 551  MTLFLVSAALDIFQTMIMDLDSEGRYLFLNAVANQLRYPNNHTHYFSFILLYLFAETNQE 372
            M +FLV AA+DIFQT+I DLD+EGRYLFLNAVANQLRYPNNHTHYFSF+LLYLFAETNQE
Sbjct: 2305 MDIFLVGAAMDIFQTLIADLDTEGRYLFLNAVANQLRYPNNHTHYFSFVLLYLFAETNQE 2364

Query: 371  IIQEQITRVLLERLVVNRPHPWGLLITFIELIKNPRYNFWSRSFTRCAPEIEKLFESVSR 192
            IIQEQITRVLLERL+VNRPHPWGLLITFIELIKNPRYNFW+RSFTRCAPEIEKLFESVSR
Sbjct: 2365 IIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPRYNFWNRSFTRCAPEIEKLFESVSR 2424

Query: 191  SCGGPKPADDGVGSGGIPDNMH 126
            SCGGPKP DD + SGGI DN H
Sbjct: 2425 SCGGPKPLDDAMVSGGISDNAH 2446



 Score =  308 bits (790), Expect(2) = 0.0
 Identities = 163/248 (65%), Positives = 188/248 (75%), Gaps = 3/248 (1%)
 Frame = -1

Query: 2001 ELHNLVDALAK--LAARPGSPESLQQLVEIAKNPSGNSAALSGLSVGKDDNNTSSSDEKA 1828
            ELHNLVDALAK  LA RPGSPESLQQLVEIA+NP+ NSAALSGL+VGKDD    S D+K 
Sbjct: 1827 ELHNLVDALAKFQLAMRPGSPESLQQLVEIARNPASNSAALSGLAVGKDDKARQSRDKKV 1886

Query: 1827 TGVTGVS-REDYTEAELVEPDPAAFREQVSALFVEWYQICELPGANDSACARYVLHLQQR 1651
                 +S REDY  AE    DPA FREQVS LF EWY+ICELPG ND+A   Y+  LQQ 
Sbjct: 1887 PSGRSMSGREDYNNAESAA-DPAGFREQVSVLFAEWYRICELPGTNDAAYTHYISQLQQN 1945

Query: 1650 GLLKGDDTSDRFFLLLMEISVSHCLSSEVINSGPSQSHQGQPLSFLAIDIYAKLVFSILK 1471
            GLLK DD SDRFF +L E+SV+HCLSSE + S      Q Q LSF+AID+YAKLV  I K
Sbjct: 1946 GLLKADDMSDRFFRILTELSVAHCLSSESLQS----PQQLQHLSFIAIDMYAKLVVLIFK 2001

Query: 1470 FCSIDEGSGKLSLLPKVLAVIVKFIQKDADEKRTSFNPRPYFRIFINWILDLCFLDPVFD 1291
            +C +D+GS KL LLPK+LAV V+ IQKDA+EK+ SFNPRPYFR+FINW+LDL   DP+ D
Sbjct: 2002 YCVVDQGSSKLLLLPKILAVTVRVIQKDAEEKKASFNPRPYFRLFINWLLDLGSPDPLLD 2061

Query: 1290 GANFQFLT 1267
            G+NFQ LT
Sbjct: 2062 GSNFQVLT 2069


>ref|XP_010258905.1| PREDICTED: CCR4-NOT transcription complex subunit 1 isoform X5
            [Nelumbo nucifera]
          Length = 2447

 Score =  634 bits (1634), Expect(2) = 0.0
 Identities = 312/382 (81%), Positives = 337/382 (88%), Gaps = 4/382 (1%)
 Frame = -2

Query: 1259 F*VLTALANAFHALQPLKIPGFSFAWLELISHRGFMPKLLTANAQKGWPYFQRLLVDLFQ 1080
            F VLTA ANAFHALQPLK+PGFSFAWLEL+SHR +MPKLLT N QKGWP+ QRLLVDLF+
Sbjct: 2066 FQVLTAFANAFHALQPLKVPGFSFAWLELVSHRSYMPKLLTLNLQKGWPFVQRLLVDLFK 2125

Query: 1079 FMEPFLRNAELGESVQFLYKGTLRVLLVLLHDFPEFLCDYHFSFCDVIPPSCIQMRSIIL 900
            F+EP+LRNAELGE V FLYKGTLRVLLVLLHDFPEFLCDYHFSFCDVIPPSCIQMR++IL
Sbjct: 2126 FLEPYLRNAELGEPVHFLYKGTLRVLLVLLHDFPEFLCDYHFSFCDVIPPSCIQMRNVIL 2185

Query: 899  SAFPRNMRLPDPSTPNLKIDLLAEINQAPHILSEVDAALKAKQIKGDVDEYLKTRQQGXX 720
            SAFPRNMRLPDPSTPNLKIDLLAEI+Q+P ILSEVD ALK K +KGD+DEYLKTRQQG  
Sbjct: 2186 SAFPRNMRLPDPSTPNLKIDLLAEISQSPRILSEVDTALKGKLMKGDIDEYLKTRQQGSS 2245

Query: 719  XXXXXXXXXXXXXSDAAHAGTRYNVPLINSLVLYVGMQAIQQLQARAPQ-HSQSI---AS 552
                          +AA AGTRYNVPLINSLVLYVGMQAIQQLQA+ P  H+  +   AS
Sbjct: 2246 FLAELKQRLLLSQGEAAQAGTRYNVPLINSLVLYVGMQAIQQLQAKTPSPHAPPMAQGAS 2305

Query: 551  MTLFLVSAALDIFQTMIMDLDSEGRYLFLNAVANQLRYPNNHTHYFSFILLYLFAETNQE 372
            M +FLV AA+DIFQT+I DLD+EGRYLFLNAVANQLRYPNNHTHYFSF+LLYLFAETNQE
Sbjct: 2306 MDIFLVGAAMDIFQTLIADLDTEGRYLFLNAVANQLRYPNNHTHYFSFVLLYLFAETNQE 2365

Query: 371  IIQEQITRVLLERLVVNRPHPWGLLITFIELIKNPRYNFWSRSFTRCAPEIEKLFESVSR 192
            IIQEQITRVLLERL+VNRPHPWGLLITFIELIKNPRYNFW+RSFTRCAPEIEKLFESVSR
Sbjct: 2366 IIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPRYNFWNRSFTRCAPEIEKLFESVSR 2425

Query: 191  SCGGPKPADDGVGSGGIPDNMH 126
            SCGGPKP DD + SGGI DN H
Sbjct: 2426 SCGGPKPLDDAMVSGGISDNAH 2447



 Score =  308 bits (790), Expect(2) = 0.0
 Identities = 163/248 (65%), Positives = 188/248 (75%), Gaps = 3/248 (1%)
 Frame = -1

Query: 2001 ELHNLVDALAK--LAARPGSPESLQQLVEIAKNPSGNSAALSGLSVGKDDNNTSSSDEKA 1828
            ELHNLVDALAK  LA RPGSPESLQQLVEIA+NP+ NSAALSGL+VGKDD    S D+K 
Sbjct: 1828 ELHNLVDALAKFQLAMRPGSPESLQQLVEIARNPASNSAALSGLAVGKDDKARQSRDKKV 1887

Query: 1827 TGVTGVS-REDYTEAELVEPDPAAFREQVSALFVEWYQICELPGANDSACARYVLHLQQR 1651
                 +S REDY  AE    DPA FREQVS LF EWY+ICELPG ND+A   Y+  LQQ 
Sbjct: 1888 PSGRSMSGREDYNNAESAA-DPAGFREQVSVLFAEWYRICELPGTNDAAYTHYISQLQQN 1946

Query: 1650 GLLKGDDTSDRFFLLLMEISVSHCLSSEVINSGPSQSHQGQPLSFLAIDIYAKLVFSILK 1471
            GLLK DD SDRFF +L E+SV+HCLSSE + S      Q Q LSF+AID+YAKLV  I K
Sbjct: 1947 GLLKADDMSDRFFRILTELSVAHCLSSESLQS----PQQLQHLSFIAIDMYAKLVVLIFK 2002

Query: 1470 FCSIDEGSGKLSLLPKVLAVIVKFIQKDADEKRTSFNPRPYFRIFINWILDLCFLDPVFD 1291
            +C +D+GS KL LLPK+LAV V+ IQKDA+EK+ SFNPRPYFR+FINW+LDL   DP+ D
Sbjct: 2003 YCVVDQGSSKLLLLPKILAVTVRVIQKDAEEKKASFNPRPYFRLFINWLLDLGSPDPLLD 2062

Query: 1290 GANFQFLT 1267
            G+NFQ LT
Sbjct: 2063 GSNFQVLT 2070


>ref|XP_010258907.1| PREDICTED: CCR4-NOT transcription complex subunit 1 isoform X7
            [Nelumbo nucifera]
          Length = 2439

 Score =  634 bits (1634), Expect(2) = 0.0
 Identities = 312/382 (81%), Positives = 337/382 (88%), Gaps = 4/382 (1%)
 Frame = -2

Query: 1259 F*VLTALANAFHALQPLKIPGFSFAWLELISHRGFMPKLLTANAQKGWPYFQRLLVDLFQ 1080
            F VLTA ANAFHALQPLK+PGFSFAWLEL+SHR +MPKLLT N QKGWP+ QRLLVDLF+
Sbjct: 2058 FQVLTAFANAFHALQPLKVPGFSFAWLELVSHRSYMPKLLTLNLQKGWPFVQRLLVDLFK 2117

Query: 1079 FMEPFLRNAELGESVQFLYKGTLRVLLVLLHDFPEFLCDYHFSFCDVIPPSCIQMRSIIL 900
            F+EP+LRNAELGE V FLYKGTLRVLLVLLHDFPEFLCDYHFSFCDVIPPSCIQMR++IL
Sbjct: 2118 FLEPYLRNAELGEPVHFLYKGTLRVLLVLLHDFPEFLCDYHFSFCDVIPPSCIQMRNVIL 2177

Query: 899  SAFPRNMRLPDPSTPNLKIDLLAEINQAPHILSEVDAALKAKQIKGDVDEYLKTRQQGXX 720
            SAFPRNMRLPDPSTPNLKIDLLAEI+Q+P ILSEVD ALK K +KGD+DEYLKTRQQG  
Sbjct: 2178 SAFPRNMRLPDPSTPNLKIDLLAEISQSPRILSEVDTALKGKLMKGDIDEYLKTRQQGSS 2237

Query: 719  XXXXXXXXXXXXXSDAAHAGTRYNVPLINSLVLYVGMQAIQQLQARAPQ-HSQSI---AS 552
                          +AA AGTRYNVPLINSLVLYVGMQAIQQLQA+ P  H+  +   AS
Sbjct: 2238 FLAELKQRLLLSQGEAAQAGTRYNVPLINSLVLYVGMQAIQQLQAKTPSPHAPPMAQGAS 2297

Query: 551  MTLFLVSAALDIFQTMIMDLDSEGRYLFLNAVANQLRYPNNHTHYFSFILLYLFAETNQE 372
            M +FLV AA+DIFQT+I DLD+EGRYLFLNAVANQLRYPNNHTHYFSF+LLYLFAETNQE
Sbjct: 2298 MDIFLVGAAMDIFQTLIADLDTEGRYLFLNAVANQLRYPNNHTHYFSFVLLYLFAETNQE 2357

Query: 371  IIQEQITRVLLERLVVNRPHPWGLLITFIELIKNPRYNFWSRSFTRCAPEIEKLFESVSR 192
            IIQEQITRVLLERL+VNRPHPWGLLITFIELIKNPRYNFW+RSFTRCAPEIEKLFESVSR
Sbjct: 2358 IIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPRYNFWNRSFTRCAPEIEKLFESVSR 2417

Query: 191  SCGGPKPADDGVGSGGIPDNMH 126
            SCGGPKP DD + SGGI DN H
Sbjct: 2418 SCGGPKPLDDAMVSGGISDNAH 2439



 Score =  308 bits (790), Expect(2) = 0.0
 Identities = 163/248 (65%), Positives = 188/248 (75%), Gaps = 3/248 (1%)
 Frame = -1

Query: 2001 ELHNLVDALAK--LAARPGSPESLQQLVEIAKNPSGNSAALSGLSVGKDDNNTSSSDEKA 1828
            ELHNLVDALAK  LA RPGSPESLQQLVEIA+NP+ NSAALSGL+VGKDD    S D+K 
Sbjct: 1820 ELHNLVDALAKFQLAMRPGSPESLQQLVEIARNPASNSAALSGLAVGKDDKARQSRDKKV 1879

Query: 1827 TGVTGVS-REDYTEAELVEPDPAAFREQVSALFVEWYQICELPGANDSACARYVLHLQQR 1651
                 +S REDY  AE    DPA FREQVS LF EWY+ICELPG ND+A   Y+  LQQ 
Sbjct: 1880 PSGRSMSGREDYNNAESAA-DPAGFREQVSVLFAEWYRICELPGTNDAAYTHYISQLQQN 1938

Query: 1650 GLLKGDDTSDRFFLLLMEISVSHCLSSEVINSGPSQSHQGQPLSFLAIDIYAKLVFSILK 1471
            GLLK DD SDRFF +L E+SV+HCLSSE + S      Q Q LSF+AID+YAKLV  I K
Sbjct: 1939 GLLKADDMSDRFFRILTELSVAHCLSSESLQS----PQQLQHLSFIAIDMYAKLVVLIFK 1994

Query: 1470 FCSIDEGSGKLSLLPKVLAVIVKFIQKDADEKRTSFNPRPYFRIFINWILDLCFLDPVFD 1291
            +C +D+GS KL LLPK+LAV V+ IQKDA+EK+ SFNPRPYFR+FINW+LDL   DP+ D
Sbjct: 1995 YCVVDQGSSKLLLLPKILAVTVRVIQKDAEEKKASFNPRPYFRLFINWLLDLGSPDPLLD 2054

Query: 1290 GANFQFLT 1267
            G+NFQ LT
Sbjct: 2055 GSNFQVLT 2062


>ref|XP_012489728.1| PREDICTED: CCR4-NOT transcription complex subunit 1-like isoform X2
            [Gossypium raimondii]
          Length = 2413

 Score =  608 bits (1569), Expect(2) = 0.0
 Identities = 307/382 (80%), Positives = 329/382 (86%), Gaps = 4/382 (1%)
 Frame = -2

Query: 1259 F*VLTALANAFHALQPLKIPGFSFAWLELISHRGFMPKLLTANAQKGWPYFQRLLVDLFQ 1080
            F +LTA ANAFHAL PLK+P FSFAWLEL+SHR FMPKLLT N QKGWPY QRLLVDL Q
Sbjct: 2033 FQILTAFANAFHALHPLKVPAFSFAWLELVSHRSFMPKLLTWNGQKGWPYIQRLLVDLLQ 2092

Query: 1079 FMEPFLRNAELGESVQFLYKGTLRVLLVLLHDFPEFLCDYHFSFCDVIPPSCIQMRSIIL 900
            F+EPFLRNAELG  V FLYKGTLRVLLVLLHDFPEFLCD HF+FCDVIPPSCIQMR+IIL
Sbjct: 2093 FLEPFLRNAELGVPVHFLYKGTLRVLLVLLHDFPEFLCDCHFTFCDVIPPSCIQMRNIIL 2152

Query: 899  SAFPRNMRLPDPSTPNLKIDLLAEINQAPHILSEVDAALKAKQIKGDVDEYLKTRQQ-GX 723
            SAFPRNMRLPDPSTPNLKIDLL EI + P ILSEVDAALKAKQ+K DVDEYLK R Q G 
Sbjct: 2153 SAFPRNMRLPDPSTPNLKIDLLPEIREPPRILSEVDAALKAKQMKADVDEYLKMRPQGGS 2212

Query: 722  XXXXXXXXXXXXXXSDAAHAGTRYNVPLINSLVLYVGMQAIQQLQARAPQHSQSIAS--- 552
                          S+AA AGTRYNVPLINSLVLYVGMQAIQQLQ+R P H+QS AS   
Sbjct: 2213 TFLTELKQRLLLSPSEAASAGTRYNVPLINSLVLYVGMQAIQQLQSRVP-HAQSAASTAP 2271

Query: 551  MTLFLVSAALDIFQTMIMDLDSEGRYLFLNAVANQLRYPNNHTHYFSFILLYLFAETNQE 372
            M++FLVSAALDIFQT+I DLD+EGRYLFLNA+ANQLRYPNNHTHYFSFILLYLFAE NQE
Sbjct: 2272 MSVFLVSAALDIFQTLIADLDTEGRYLFLNAIANQLRYPNNHTHYFSFILLYLFAEANQE 2331

Query: 371  IIQEQITRVLLERLVVNRPHPWGLLITFIELIKNPRYNFWSRSFTRCAPEIEKLFESVSR 192
            IIQEQITRVLLERL+VN+PHPWGLLITFIELIKNPRYNFW+RSF RCAPEIEKLFESV+R
Sbjct: 2332 IIQEQITRVLLERLIVNKPHPWGLLITFIELIKNPRYNFWNRSFIRCAPEIEKLFESVAR 2391

Query: 191  SCGGPKPADDGVGSGGIPDNMH 126
            SCGG KP DD + SG + DN H
Sbjct: 2392 SCGGLKPVDDSIVSGWVSDNAH 2413



 Score =  325 bits (832), Expect(2) = 0.0
 Identities = 159/246 (64%), Positives = 194/246 (78%), Gaps = 1/246 (0%)
 Frame = -1

Query: 2001 ELHNLVDALAKLAARPGSPESLQQLVEIAKNPSGNSAALSGLSVGKDDNNTSSSDEKATG 1822
            ELHNLVDALAK+A++PGS ESLQ L+E+  NPS + A LS  S+GK+D    S D+KA G
Sbjct: 1792 ELHNLVDALAKVASKPGSSESLQHLIEMIGNPSASMAVLSSASIGKEDKTRQSRDKKAPG 1851

Query: 1821 VTGVSREDYTEAELVEPDPAAFREQVSALFVEWYQICELPGANDSACARYVLHLQQRGLL 1642
             T  SRED +  E +EPDPA F+EQVS LF EWYQICELPGAND  C  Y++ L Q GLL
Sbjct: 1852 HTPASREDNSNIEALEPDPAGFKEQVSMLFAEWYQICELPGANDGPCNHYIVQLHQNGLL 1911

Query: 1641 KGDDTSDRFFLLLMEISVSHCLSSEVINSGPSQS-HQGQPLSFLAIDIYAKLVFSILKFC 1465
            KGDDT++RFF ++ME+SV+HCLSSEV+NSG  QS  Q Q LSFLAIDIYAKLV SILKFC
Sbjct: 1912 KGDDTTERFFRIIMELSVAHCLSSEVMNSGTLQSPQQVQTLSFLAIDIYAKLVVSILKFC 1971

Query: 1464 SIDEGSGKLSLLPKVLAVIVKFIQKDADEKRTSFNPRPYFRIFINWILDLCFLDPVFDGA 1285
             +++GS KL L+ K+L V V+ IQK+A++++ +FNPRPYFR+FINW+LDL  LDPV DGA
Sbjct: 1972 PVEQGSSKLFLMSKILTVTVRLIQKEAEDRKAAFNPRPYFRLFINWLLDLGSLDPVPDGA 2031

Query: 1284 NFQFLT 1267
            NFQ LT
Sbjct: 2032 NFQILT 2037


>ref|XP_012489727.1| PREDICTED: CCR4-NOT transcription complex subunit 1-like isoform X1
            [Gossypium raimondii]
          Length = 2414

 Score =  608 bits (1569), Expect(2) = 0.0
 Identities = 307/382 (80%), Positives = 329/382 (86%), Gaps = 4/382 (1%)
 Frame = -2

Query: 1259 F*VLTALANAFHALQPLKIPGFSFAWLELISHRGFMPKLLTANAQKGWPYFQRLLVDLFQ 1080
            F +LTA ANAFHAL PLK+P FSFAWLEL+SHR FMPKLLT N QKGWPY QRLLVDL Q
Sbjct: 2034 FQILTAFANAFHALHPLKVPAFSFAWLELVSHRSFMPKLLTWNGQKGWPYIQRLLVDLLQ 2093

Query: 1079 FMEPFLRNAELGESVQFLYKGTLRVLLVLLHDFPEFLCDYHFSFCDVIPPSCIQMRSIIL 900
            F+EPFLRNAELG  V FLYKGTLRVLLVLLHDFPEFLCD HF+FCDVIPPSCIQMR+IIL
Sbjct: 2094 FLEPFLRNAELGVPVHFLYKGTLRVLLVLLHDFPEFLCDCHFTFCDVIPPSCIQMRNIIL 2153

Query: 899  SAFPRNMRLPDPSTPNLKIDLLAEINQAPHILSEVDAALKAKQIKGDVDEYLKTRQQ-GX 723
            SAFPRNMRLPDPSTPNLKIDLL EI + P ILSEVDAALKAKQ+K DVDEYLK R Q G 
Sbjct: 2154 SAFPRNMRLPDPSTPNLKIDLLPEIREPPRILSEVDAALKAKQMKADVDEYLKMRPQGGS 2213

Query: 722  XXXXXXXXXXXXXXSDAAHAGTRYNVPLINSLVLYVGMQAIQQLQARAPQHSQSIAS--- 552
                          S+AA AGTRYNVPLINSLVLYVGMQAIQQLQ+R P H+QS AS   
Sbjct: 2214 TFLTELKQRLLLSPSEAASAGTRYNVPLINSLVLYVGMQAIQQLQSRVP-HAQSAASTAP 2272

Query: 551  MTLFLVSAALDIFQTMIMDLDSEGRYLFLNAVANQLRYPNNHTHYFSFILLYLFAETNQE 372
            M++FLVSAALDIFQT+I DLD+EGRYLFLNA+ANQLRYPNNHTHYFSFILLYLFAE NQE
Sbjct: 2273 MSVFLVSAALDIFQTLIADLDTEGRYLFLNAIANQLRYPNNHTHYFSFILLYLFAEANQE 2332

Query: 371  IIQEQITRVLLERLVVNRPHPWGLLITFIELIKNPRYNFWSRSFTRCAPEIEKLFESVSR 192
            IIQEQITRVLLERL+VN+PHPWGLLITFIELIKNPRYNFW+RSF RCAPEIEKLFESV+R
Sbjct: 2333 IIQEQITRVLLERLIVNKPHPWGLLITFIELIKNPRYNFWNRSFIRCAPEIEKLFESVAR 2392

Query: 191  SCGGPKPADDGVGSGGIPDNMH 126
            SCGG KP DD + SG + DN H
Sbjct: 2393 SCGGLKPVDDSIVSGWVSDNAH 2414



 Score =  325 bits (832), Expect(2) = 0.0
 Identities = 159/246 (64%), Positives = 194/246 (78%), Gaps = 1/246 (0%)
 Frame = -1

Query: 2001 ELHNLVDALAKLAARPGSPESLQQLVEIAKNPSGNSAALSGLSVGKDDNNTSSSDEKATG 1822
            ELHNLVDALAK+A++PGS ESLQ L+E+  NPS + A LS  S+GK+D    S D+KA G
Sbjct: 1793 ELHNLVDALAKVASKPGSSESLQHLIEMIGNPSASMAVLSSASIGKEDKTRQSRDKKAPG 1852

Query: 1821 VTGVSREDYTEAELVEPDPAAFREQVSALFVEWYQICELPGANDSACARYVLHLQQRGLL 1642
             T  SRED +  E +EPDPA F+EQVS LF EWYQICELPGAND  C  Y++ L Q GLL
Sbjct: 1853 HTPASREDNSNIEALEPDPAGFKEQVSMLFAEWYQICELPGANDGPCNHYIVQLHQNGLL 1912

Query: 1641 KGDDTSDRFFLLLMEISVSHCLSSEVINSGPSQS-HQGQPLSFLAIDIYAKLVFSILKFC 1465
            KGDDT++RFF ++ME+SV+HCLSSEV+NSG  QS  Q Q LSFLAIDIYAKLV SILKFC
Sbjct: 1913 KGDDTTERFFRIIMELSVAHCLSSEVMNSGTLQSPQQVQTLSFLAIDIYAKLVVSILKFC 1972

Query: 1464 SIDEGSGKLSLLPKVLAVIVKFIQKDADEKRTSFNPRPYFRIFINWILDLCFLDPVFDGA 1285
             +++GS KL L+ K+L V V+ IQK+A++++ +FNPRPYFR+FINW+LDL  LDPV DGA
Sbjct: 1973 PVEQGSSKLFLMSKILTVTVRLIQKEAEDRKAAFNPRPYFRLFINWLLDLGSLDPVPDGA 2032

Query: 1284 NFQFLT 1267
            NFQ LT
Sbjct: 2033 NFQILT 2038


>ref|XP_012489729.1| PREDICTED: CCR4-NOT transcription complex subunit 1-like isoform X3
            [Gossypium raimondii]
          Length = 2407

 Score =  608 bits (1569), Expect(2) = 0.0
 Identities = 307/382 (80%), Positives = 329/382 (86%), Gaps = 4/382 (1%)
 Frame = -2

Query: 1259 F*VLTALANAFHALQPLKIPGFSFAWLELISHRGFMPKLLTANAQKGWPYFQRLLVDLFQ 1080
            F +LTA ANAFHAL PLK+P FSFAWLEL+SHR FMPKLLT N QKGWPY QRLLVDL Q
Sbjct: 2027 FQILTAFANAFHALHPLKVPAFSFAWLELVSHRSFMPKLLTWNGQKGWPYIQRLLVDLLQ 2086

Query: 1079 FMEPFLRNAELGESVQFLYKGTLRVLLVLLHDFPEFLCDYHFSFCDVIPPSCIQMRSIIL 900
            F+EPFLRNAELG  V FLYKGTLRVLLVLLHDFPEFLCD HF+FCDVIPPSCIQMR+IIL
Sbjct: 2087 FLEPFLRNAELGVPVHFLYKGTLRVLLVLLHDFPEFLCDCHFTFCDVIPPSCIQMRNIIL 2146

Query: 899  SAFPRNMRLPDPSTPNLKIDLLAEINQAPHILSEVDAALKAKQIKGDVDEYLKTRQQ-GX 723
            SAFPRNMRLPDPSTPNLKIDLL EI + P ILSEVDAALKAKQ+K DVDEYLK R Q G 
Sbjct: 2147 SAFPRNMRLPDPSTPNLKIDLLPEIREPPRILSEVDAALKAKQMKADVDEYLKMRPQGGS 2206

Query: 722  XXXXXXXXXXXXXXSDAAHAGTRYNVPLINSLVLYVGMQAIQQLQARAPQHSQSIAS--- 552
                          S+AA AGTRYNVPLINSLVLYVGMQAIQQLQ+R P H+QS AS   
Sbjct: 2207 TFLTELKQRLLLSPSEAASAGTRYNVPLINSLVLYVGMQAIQQLQSRVP-HAQSAASTAP 2265

Query: 551  MTLFLVSAALDIFQTMIMDLDSEGRYLFLNAVANQLRYPNNHTHYFSFILLYLFAETNQE 372
            M++FLVSAALDIFQT+I DLD+EGRYLFLNA+ANQLRYPNNHTHYFSFILLYLFAE NQE
Sbjct: 2266 MSVFLVSAALDIFQTLIADLDTEGRYLFLNAIANQLRYPNNHTHYFSFILLYLFAEANQE 2325

Query: 371  IIQEQITRVLLERLVVNRPHPWGLLITFIELIKNPRYNFWSRSFTRCAPEIEKLFESVSR 192
            IIQEQITRVLLERL+VN+PHPWGLLITFIELIKNPRYNFW+RSF RCAPEIEKLFESV+R
Sbjct: 2326 IIQEQITRVLLERLIVNKPHPWGLLITFIELIKNPRYNFWNRSFIRCAPEIEKLFESVAR 2385

Query: 191  SCGGPKPADDGVGSGGIPDNMH 126
            SCGG KP DD + SG + DN H
Sbjct: 2386 SCGGLKPVDDSIVSGWVSDNAH 2407



 Score =  325 bits (832), Expect(2) = 0.0
 Identities = 159/246 (64%), Positives = 194/246 (78%), Gaps = 1/246 (0%)
 Frame = -1

Query: 2001 ELHNLVDALAKLAARPGSPESLQQLVEIAKNPSGNSAALSGLSVGKDDNNTSSSDEKATG 1822
            ELHNLVDALAK+A++PGS ESLQ L+E+  NPS + A LS  S+GK+D    S D+KA G
Sbjct: 1786 ELHNLVDALAKVASKPGSSESLQHLIEMIGNPSASMAVLSSASIGKEDKTRQSRDKKAPG 1845

Query: 1821 VTGVSREDYTEAELVEPDPAAFREQVSALFVEWYQICELPGANDSACARYVLHLQQRGLL 1642
             T  SRED +  E +EPDPA F+EQVS LF EWYQICELPGAND  C  Y++ L Q GLL
Sbjct: 1846 HTPASREDNSNIEALEPDPAGFKEQVSMLFAEWYQICELPGANDGPCNHYIVQLHQNGLL 1905

Query: 1641 KGDDTSDRFFLLLMEISVSHCLSSEVINSGPSQS-HQGQPLSFLAIDIYAKLVFSILKFC 1465
            KGDDT++RFF ++ME+SV+HCLSSEV+NSG  QS  Q Q LSFLAIDIYAKLV SILKFC
Sbjct: 1906 KGDDTTERFFRIIMELSVAHCLSSEVMNSGTLQSPQQVQTLSFLAIDIYAKLVVSILKFC 1965

Query: 1464 SIDEGSGKLSLLPKVLAVIVKFIQKDADEKRTSFNPRPYFRIFINWILDLCFLDPVFDGA 1285
             +++GS KL L+ K+L V V+ IQK+A++++ +FNPRPYFR+FINW+LDL  LDPV DGA
Sbjct: 1966 PVEQGSSKLFLMSKILTVTVRLIQKEAEDRKAAFNPRPYFRLFINWLLDLGSLDPVPDGA 2025

Query: 1284 NFQFLT 1267
            NFQ LT
Sbjct: 2026 NFQILT 2031


>ref|XP_012489730.1| PREDICTED: CCR4-NOT transcription complex subunit 1-like isoform X4
            [Gossypium raimondii]
          Length = 2338

 Score =  608 bits (1569), Expect(2) = 0.0
 Identities = 307/382 (80%), Positives = 329/382 (86%), Gaps = 4/382 (1%)
 Frame = -2

Query: 1259 F*VLTALANAFHALQPLKIPGFSFAWLELISHRGFMPKLLTANAQKGWPYFQRLLVDLFQ 1080
            F +LTA ANAFHAL PLK+P FSFAWLEL+SHR FMPKLLT N QKGWPY QRLLVDL Q
Sbjct: 1958 FQILTAFANAFHALHPLKVPAFSFAWLELVSHRSFMPKLLTWNGQKGWPYIQRLLVDLLQ 2017

Query: 1079 FMEPFLRNAELGESVQFLYKGTLRVLLVLLHDFPEFLCDYHFSFCDVIPPSCIQMRSIIL 900
            F+EPFLRNAELG  V FLYKGTLRVLLVLLHDFPEFLCD HF+FCDVIPPSCIQMR+IIL
Sbjct: 2018 FLEPFLRNAELGVPVHFLYKGTLRVLLVLLHDFPEFLCDCHFTFCDVIPPSCIQMRNIIL 2077

Query: 899  SAFPRNMRLPDPSTPNLKIDLLAEINQAPHILSEVDAALKAKQIKGDVDEYLKTRQQ-GX 723
            SAFPRNMRLPDPSTPNLKIDLL EI + P ILSEVDAALKAKQ+K DVDEYLK R Q G 
Sbjct: 2078 SAFPRNMRLPDPSTPNLKIDLLPEIREPPRILSEVDAALKAKQMKADVDEYLKMRPQGGS 2137

Query: 722  XXXXXXXXXXXXXXSDAAHAGTRYNVPLINSLVLYVGMQAIQQLQARAPQHSQSIAS--- 552
                          S+AA AGTRYNVPLINSLVLYVGMQAIQQLQ+R P H+QS AS   
Sbjct: 2138 TFLTELKQRLLLSPSEAASAGTRYNVPLINSLVLYVGMQAIQQLQSRVP-HAQSAASTAP 2196

Query: 551  MTLFLVSAALDIFQTMIMDLDSEGRYLFLNAVANQLRYPNNHTHYFSFILLYLFAETNQE 372
            M++FLVSAALDIFQT+I DLD+EGRYLFLNA+ANQLRYPNNHTHYFSFILLYLFAE NQE
Sbjct: 2197 MSVFLVSAALDIFQTLIADLDTEGRYLFLNAIANQLRYPNNHTHYFSFILLYLFAEANQE 2256

Query: 371  IIQEQITRVLLERLVVNRPHPWGLLITFIELIKNPRYNFWSRSFTRCAPEIEKLFESVSR 192
            IIQEQITRVLLERL+VN+PHPWGLLITFIELIKNPRYNFW+RSF RCAPEIEKLFESV+R
Sbjct: 2257 IIQEQITRVLLERLIVNKPHPWGLLITFIELIKNPRYNFWNRSFIRCAPEIEKLFESVAR 2316

Query: 191  SCGGPKPADDGVGSGGIPDNMH 126
            SCGG KP DD + SG + DN H
Sbjct: 2317 SCGGLKPVDDSIVSGWVSDNAH 2338



 Score =  325 bits (832), Expect(2) = 0.0
 Identities = 159/246 (64%), Positives = 194/246 (78%), Gaps = 1/246 (0%)
 Frame = -1

Query: 2001 ELHNLVDALAKLAARPGSPESLQQLVEIAKNPSGNSAALSGLSVGKDDNNTSSSDEKATG 1822
            ELHNLVDALAK+A++PGS ESLQ L+E+  NPS + A LS  S+GK+D    S D+KA G
Sbjct: 1717 ELHNLVDALAKVASKPGSSESLQHLIEMIGNPSASMAVLSSASIGKEDKTRQSRDKKAPG 1776

Query: 1821 VTGVSREDYTEAELVEPDPAAFREQVSALFVEWYQICELPGANDSACARYVLHLQQRGLL 1642
             T  SRED +  E +EPDPA F+EQVS LF EWYQICELPGAND  C  Y++ L Q GLL
Sbjct: 1777 HTPASREDNSNIEALEPDPAGFKEQVSMLFAEWYQICELPGANDGPCNHYIVQLHQNGLL 1836

Query: 1641 KGDDTSDRFFLLLMEISVSHCLSSEVINSGPSQS-HQGQPLSFLAIDIYAKLVFSILKFC 1465
            KGDDT++RFF ++ME+SV+HCLSSEV+NSG  QS  Q Q LSFLAIDIYAKLV SILKFC
Sbjct: 1837 KGDDTTERFFRIIMELSVAHCLSSEVMNSGTLQSPQQVQTLSFLAIDIYAKLVVSILKFC 1896

Query: 1464 SIDEGSGKLSLLPKVLAVIVKFIQKDADEKRTSFNPRPYFRIFINWILDLCFLDPVFDGA 1285
             +++GS KL L+ K+L V V+ IQK+A++++ +FNPRPYFR+FINW+LDL  LDPV DGA
Sbjct: 1897 PVEQGSSKLFLMSKILTVTVRLIQKEAEDRKAAFNPRPYFRLFINWLLDLGSLDPVPDGA 1956

Query: 1284 NFQFLT 1267
            NFQ LT
Sbjct: 1957 NFQILT 1962


>gb|KJB41042.1| hypothetical protein B456_007G0881001, partial [Gossypium raimondii]
            gi|763773920|gb|KJB41043.1| hypothetical protein
            B456_007G0881001, partial [Gossypium raimondii]
            gi|763773922|gb|KJB41045.1| hypothetical protein
            B456_007G0881001, partial [Gossypium raimondii]
          Length = 1795

 Score =  608 bits (1569), Expect(2) = 0.0
 Identities = 307/382 (80%), Positives = 329/382 (86%), Gaps = 4/382 (1%)
 Frame = -2

Query: 1259 F*VLTALANAFHALQPLKIPGFSFAWLELISHRGFMPKLLTANAQKGWPYFQRLLVDLFQ 1080
            F +LTA ANAFHAL PLK+P FSFAWLEL+SHR FMPKLLT N QKGWPY QRLLVDL Q
Sbjct: 1415 FQILTAFANAFHALHPLKVPAFSFAWLELVSHRSFMPKLLTWNGQKGWPYIQRLLVDLLQ 1474

Query: 1079 FMEPFLRNAELGESVQFLYKGTLRVLLVLLHDFPEFLCDYHFSFCDVIPPSCIQMRSIIL 900
            F+EPFLRNAELG  V FLYKGTLRVLLVLLHDFPEFLCD HF+FCDVIPPSCIQMR+IIL
Sbjct: 1475 FLEPFLRNAELGVPVHFLYKGTLRVLLVLLHDFPEFLCDCHFTFCDVIPPSCIQMRNIIL 1534

Query: 899  SAFPRNMRLPDPSTPNLKIDLLAEINQAPHILSEVDAALKAKQIKGDVDEYLKTRQQ-GX 723
            SAFPRNMRLPDPSTPNLKIDLL EI + P ILSEVDAALKAKQ+K DVDEYLK R Q G 
Sbjct: 1535 SAFPRNMRLPDPSTPNLKIDLLPEIREPPRILSEVDAALKAKQMKADVDEYLKMRPQGGS 1594

Query: 722  XXXXXXXXXXXXXXSDAAHAGTRYNVPLINSLVLYVGMQAIQQLQARAPQHSQSIAS--- 552
                          S+AA AGTRYNVPLINSLVLYVGMQAIQQLQ+R P H+QS AS   
Sbjct: 1595 TFLTELKQRLLLSPSEAASAGTRYNVPLINSLVLYVGMQAIQQLQSRVP-HAQSAASTAP 1653

Query: 551  MTLFLVSAALDIFQTMIMDLDSEGRYLFLNAVANQLRYPNNHTHYFSFILLYLFAETNQE 372
            M++FLVSAALDIFQT+I DLD+EGRYLFLNA+ANQLRYPNNHTHYFSFILLYLFAE NQE
Sbjct: 1654 MSVFLVSAALDIFQTLIADLDTEGRYLFLNAIANQLRYPNNHTHYFSFILLYLFAEANQE 1713

Query: 371  IIQEQITRVLLERLVVNRPHPWGLLITFIELIKNPRYNFWSRSFTRCAPEIEKLFESVSR 192
            IIQEQITRVLLERL+VN+PHPWGLLITFIELIKNPRYNFW+RSF RCAPEIEKLFESV+R
Sbjct: 1714 IIQEQITRVLLERLIVNKPHPWGLLITFIELIKNPRYNFWNRSFIRCAPEIEKLFESVAR 1773

Query: 191  SCGGPKPADDGVGSGGIPDNMH 126
            SCGG KP DD + SG + DN H
Sbjct: 1774 SCGGLKPVDDSIVSGWVSDNAH 1795



 Score =  325 bits (832), Expect(2) = 0.0
 Identities = 159/246 (64%), Positives = 194/246 (78%), Gaps = 1/246 (0%)
 Frame = -1

Query: 2001 ELHNLVDALAKLAARPGSPESLQQLVEIAKNPSGNSAALSGLSVGKDDNNTSSSDEKATG 1822
            ELHNLVDALAK+A++PGS ESLQ L+E+  NPS + A LS  S+GK+D    S D+KA G
Sbjct: 1174 ELHNLVDALAKVASKPGSSESLQHLIEMIGNPSASMAVLSSASIGKEDKTRQSRDKKAPG 1233

Query: 1821 VTGVSREDYTEAELVEPDPAAFREQVSALFVEWYQICELPGANDSACARYVLHLQQRGLL 1642
             T  SRED +  E +EPDPA F+EQVS LF EWYQICELPGAND  C  Y++ L Q GLL
Sbjct: 1234 HTPASREDNSNIEALEPDPAGFKEQVSMLFAEWYQICELPGANDGPCNHYIVQLHQNGLL 1293

Query: 1641 KGDDTSDRFFLLLMEISVSHCLSSEVINSGPSQS-HQGQPLSFLAIDIYAKLVFSILKFC 1465
            KGDDT++RFF ++ME+SV+HCLSSEV+NSG  QS  Q Q LSFLAIDIYAKLV SILKFC
Sbjct: 1294 KGDDTTERFFRIIMELSVAHCLSSEVMNSGTLQSPQQVQTLSFLAIDIYAKLVVSILKFC 1353

Query: 1464 SIDEGSGKLSLLPKVLAVIVKFIQKDADEKRTSFNPRPYFRIFINWILDLCFLDPVFDGA 1285
             +++GS KL L+ K+L V V+ IQK+A++++ +FNPRPYFR+FINW+LDL  LDPV DGA
Sbjct: 1354 PVEQGSSKLFLMSKILTVTVRLIQKEAEDRKAAFNPRPYFRLFINWLLDLGSLDPVPDGA 1413

Query: 1284 NFQFLT 1267
            NFQ LT
Sbjct: 1414 NFQILT 1419


>gb|KJB41046.1| hypothetical protein B456_007G0881001, partial [Gossypium raimondii]
          Length = 1788

 Score =  608 bits (1569), Expect(2) = 0.0
 Identities = 307/382 (80%), Positives = 329/382 (86%), Gaps = 4/382 (1%)
 Frame = -2

Query: 1259 F*VLTALANAFHALQPLKIPGFSFAWLELISHRGFMPKLLTANAQKGWPYFQRLLVDLFQ 1080
            F +LTA ANAFHAL PLK+P FSFAWLEL+SHR FMPKLLT N QKGWPY QRLLVDL Q
Sbjct: 1408 FQILTAFANAFHALHPLKVPAFSFAWLELVSHRSFMPKLLTWNGQKGWPYIQRLLVDLLQ 1467

Query: 1079 FMEPFLRNAELGESVQFLYKGTLRVLLVLLHDFPEFLCDYHFSFCDVIPPSCIQMRSIIL 900
            F+EPFLRNAELG  V FLYKGTLRVLLVLLHDFPEFLCD HF+FCDVIPPSCIQMR+IIL
Sbjct: 1468 FLEPFLRNAELGVPVHFLYKGTLRVLLVLLHDFPEFLCDCHFTFCDVIPPSCIQMRNIIL 1527

Query: 899  SAFPRNMRLPDPSTPNLKIDLLAEINQAPHILSEVDAALKAKQIKGDVDEYLKTRQQ-GX 723
            SAFPRNMRLPDPSTPNLKIDLL EI + P ILSEVDAALKAKQ+K DVDEYLK R Q G 
Sbjct: 1528 SAFPRNMRLPDPSTPNLKIDLLPEIREPPRILSEVDAALKAKQMKADVDEYLKMRPQGGS 1587

Query: 722  XXXXXXXXXXXXXXSDAAHAGTRYNVPLINSLVLYVGMQAIQQLQARAPQHSQSIAS--- 552
                          S+AA AGTRYNVPLINSLVLYVGMQAIQQLQ+R P H+QS AS   
Sbjct: 1588 TFLTELKQRLLLSPSEAASAGTRYNVPLINSLVLYVGMQAIQQLQSRVP-HAQSAASTAP 1646

Query: 551  MTLFLVSAALDIFQTMIMDLDSEGRYLFLNAVANQLRYPNNHTHYFSFILLYLFAETNQE 372
            M++FLVSAALDIFQT+I DLD+EGRYLFLNA+ANQLRYPNNHTHYFSFILLYLFAE NQE
Sbjct: 1647 MSVFLVSAALDIFQTLIADLDTEGRYLFLNAIANQLRYPNNHTHYFSFILLYLFAEANQE 1706

Query: 371  IIQEQITRVLLERLVVNRPHPWGLLITFIELIKNPRYNFWSRSFTRCAPEIEKLFESVSR 192
            IIQEQITRVLLERL+VN+PHPWGLLITFIELIKNPRYNFW+RSF RCAPEIEKLFESV+R
Sbjct: 1707 IIQEQITRVLLERLIVNKPHPWGLLITFIELIKNPRYNFWNRSFIRCAPEIEKLFESVAR 1766

Query: 191  SCGGPKPADDGVGSGGIPDNMH 126
            SCGG KP DD + SG + DN H
Sbjct: 1767 SCGGLKPVDDSIVSGWVSDNAH 1788



 Score =  325 bits (832), Expect(2) = 0.0
 Identities = 159/246 (64%), Positives = 194/246 (78%), Gaps = 1/246 (0%)
 Frame = -1

Query: 2001 ELHNLVDALAKLAARPGSPESLQQLVEIAKNPSGNSAALSGLSVGKDDNNTSSSDEKATG 1822
            ELHNLVDALAK+A++PGS ESLQ L+E+  NPS + A LS  S+GK+D    S D+KA G
Sbjct: 1167 ELHNLVDALAKVASKPGSSESLQHLIEMIGNPSASMAVLSSASIGKEDKTRQSRDKKAPG 1226

Query: 1821 VTGVSREDYTEAELVEPDPAAFREQVSALFVEWYQICELPGANDSACARYVLHLQQRGLL 1642
             T  SRED +  E +EPDPA F+EQVS LF EWYQICELPGAND  C  Y++ L Q GLL
Sbjct: 1227 HTPASREDNSNIEALEPDPAGFKEQVSMLFAEWYQICELPGANDGPCNHYIVQLHQNGLL 1286

Query: 1641 KGDDTSDRFFLLLMEISVSHCLSSEVINSGPSQS-HQGQPLSFLAIDIYAKLVFSILKFC 1465
            KGDDT++RFF ++ME+SV+HCLSSEV+NSG  QS  Q Q LSFLAIDIYAKLV SILKFC
Sbjct: 1287 KGDDTTERFFRIIMELSVAHCLSSEVMNSGTLQSPQQVQTLSFLAIDIYAKLVVSILKFC 1346

Query: 1464 SIDEGSGKLSLLPKVLAVIVKFIQKDADEKRTSFNPRPYFRIFINWILDLCFLDPVFDGA 1285
             +++GS KL L+ K+L V V+ IQK+A++++ +FNPRPYFR+FINW+LDL  LDPV DGA
Sbjct: 1347 PVEQGSSKLFLMSKILTVTVRLIQKEAEDRKAAFNPRPYFRLFINWLLDLGSLDPVPDGA 1406

Query: 1284 NFQFLT 1267
            NFQ LT
Sbjct: 1407 NFQILT 1412


>ref|XP_012083636.1| PREDICTED: CCR4-NOT transcription complex subunit 1 [Jatropha curcas]
          Length = 2420

 Score =  610 bits (1572), Expect(2) = 0.0
 Identities = 302/382 (79%), Positives = 329/382 (86%), Gaps = 3/382 (0%)
 Frame = -2

Query: 1262 IF*VLTALANAFHALQPLKIPGFSFAWLELISHRGFMPKLLTANAQKGWPYFQRLLVDLF 1083
            IF +LTA A AFH LQPLK+P FSFAWLEL+SHR FMPKLL  NAQKGWPY QRLLVDLF
Sbjct: 2040 IFQILTAFAGAFHNLQPLKVPAFSFAWLELVSHRSFMPKLLMGNAQKGWPYIQRLLVDLF 2099

Query: 1082 QFMEPFLRNAELGESVQFLYKGTLRVLLVLLHDFPEFLCDYHFSFCDVIPPSCIQMRSII 903
            QF+EPFLR+AELG  V FLYKGTLRVLLVLLHDFPEFLCDYHF+FCDVIPPSCIQMR+II
Sbjct: 2100 QFLEPFLRSAELGMPVHFLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNII 2159

Query: 902  LSAFPRNMRLPDPSTPNLKIDLLAEINQAPHILSEVDAALKAKQIKGDVDEYLKTRQQGX 723
            LSAFPRNMRLPDPSTPNLKIDLL EI +APHILSEVDAALK KQ+K DVDEYLKTRQQG 
Sbjct: 2160 LSAFPRNMRLPDPSTPNLKIDLLPEIREAPHILSEVDAALKLKQMKADVDEYLKTRQQGS 2219

Query: 722  XXXXXXXXXXXXXXSDAAHAGTRYNVPLINSLVLYVGMQAIQQLQARAPQHSQS---IAS 552
                           +AA AGTRYNVPLINSLVLY GMQAIQQLQAR P H+QS    A 
Sbjct: 2220 SFLTELKQRLLLSPGEAASAGTRYNVPLINSLVLYAGMQAIQQLQARTP-HAQSTGNTAP 2278

Query: 551  MTLFLVSAALDIFQTMIMDLDSEGRYLFLNAVANQLRYPNNHTHYFSFILLYLFAETNQE 372
            + + LV AALDI+QT+I++LD+EGRYLFLNAVANQLRYPNNHTHYFSF+LLYLFAE+NQE
Sbjct: 2279 LAVLLVDAALDIYQTLILELDTEGRYLFLNAVANQLRYPNNHTHYFSFVLLYLFAESNQE 2338

Query: 371  IIQEQITRVLLERLVVNRPHPWGLLITFIELIKNPRYNFWSRSFTRCAPEIEKLFESVSR 192
            IIQEQITRVLLERL+VNRPHPWGLLITFIELIKNPRYNFW+RSF RCAPEIEKLFESV+R
Sbjct: 2339 IIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPRYNFWNRSFIRCAPEIEKLFESVAR 2398

Query: 191  SCGGPKPADDGVGSGGIPDNMH 126
            SCGG KP D+ + SG + +  H
Sbjct: 2399 SCGGLKPMDESMVSGWVSEGTH 2420



 Score =  320 bits (821), Expect(2) = 0.0
 Identities = 162/247 (65%), Positives = 194/247 (78%), Gaps = 2/247 (0%)
 Frame = -1

Query: 2001 ELHNLVDALAKLAARPGSPESLQQLVEIAKNP-SGNSAALSGLSVGKDDNNTSSSDEKAT 1825
            ELHNLVDALAK AA+PGSPESLQQL+EI +NP + NSAAL+  +  K+D    S D+KA 
Sbjct: 1802 ELHNLVDALAKFAAKPGSPESLQQLIEIVRNPVAANSAALTDFTSVKEDKTRQSRDKKAA 1861

Query: 1824 GVTGVSREDYTEAELVEPDPAAFREQVSALFVEWYQICELPGANDSACARYVLHLQQRGL 1645
              +  +REDY+  + VEPDP  FREQVS LF EWY+ICELPGAND+ C  Y+L L Q GL
Sbjct: 1862 SQSIANREDYSNLDSVEPDPVGFREQVSMLFAEWYRICELPGANDAGCTHYILQLHQNGL 1921

Query: 1644 LKGDDTSDRFFLLLMEISVSHCLSSEVINSGPSQS-HQGQPLSFLAIDIYAKLVFSILKF 1468
            LKGDD +DRFF +L E+SV+HCLSSEVI+SG  QS  QGQ LSFLAIDIYAKLVFSILK 
Sbjct: 1922 LKGDDMTDRFFRILTELSVAHCLSSEVISSGALQSPQQGQSLSFLAIDIYAKLVFSILK- 1980

Query: 1467 CSIDEGSGKLSLLPKVLAVIVKFIQKDADEKRTSFNPRPYFRIFINWILDLCFLDPVFDG 1288
              +++GS +  LL K+LAV V+FIQKD++EK+TSFNPRPYFR+F+NW+LDL   DPV DG
Sbjct: 1981 --VEQGSSRFFLLSKILAVTVRFIQKDSEEKKTSFNPRPYFRLFVNWLLDLVSSDPVIDG 2038

Query: 1287 ANFQFLT 1267
            A FQ LT
Sbjct: 2039 AIFQILT 2045


>ref|XP_009348858.1| PREDICTED: CCR4-NOT transcription complex subunit 1-like isoform X2
            [Pyrus x bretschneideri]
          Length = 2393

 Score =  609 bits (1571), Expect(2) = 0.0
 Identities = 303/381 (79%), Positives = 333/381 (87%), Gaps = 3/381 (0%)
 Frame = -2

Query: 1259 F*VLTALANAFHALQPLKIPGFSFAWLELISHRGFMPKLLTANAQKGWPYFQRLLVDLFQ 1080
            F +LTA ANAFH LQPLK+P FSFAWLEL+SHR FMPK+L  N QKGWPY QRLLV LFQ
Sbjct: 2014 FQILTAFANAFHVLQPLKVPTFSFAWLELVSHRSFMPKMLVGNGQKGWPYVQRLLVHLFQ 2073

Query: 1079 FMEPFLRNAELGESVQFLYKGTLRVLLVLLHDFPEFLCDYHFSFCDVIPPSCIQMRSIIL 900
            FMEPFLRNAELG  V F+YKGTLRVLLVLLHDFPEFLCDYHF+FCDVIPPSCIQMR+IIL
Sbjct: 2074 FMEPFLRNAELGVPVHFMYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIIL 2133

Query: 899  SAFPRNMRLPDPSTPNLKIDLLAEINQAPHILSEVDAALKAKQIKGDVDEYLKTRQQGXX 720
            SAFPRNMRLPDPSTPNLKIDLLAEI+Q+P ILSEVDAALKAKQ+K DVDEYLKTRQQG  
Sbjct: 2134 SAFPRNMRLPDPSTPNLKIDLLAEISQSPRILSEVDAALKAKQMKADVDEYLKTRQQGSS 2193

Query: 719  XXXXXXXXXXXXXSDAAHAGTRYNVPLINSLVLYVGMQAIQQLQARAPQHSQSIAS--MT 546
                         S+AA AGTRYNVPLINSLVLYVGMQAIQQLQAR P H+QS  +  +T
Sbjct: 2194 FLTELKQKLLLLPSEAASAGTRYNVPLINSLVLYVGMQAIQQLQARTP-HAQSTQTVPLT 2252

Query: 545  LFLVSAALDIFQTMIMDLDSEGRYLFLNAVANQLRYPNNHTHYFSFILLYLFAETNQ-EI 369
            ++LV AALDIFQT+I+DLD+EGRYLFLNA+ANQLRYPN HTHYFSFI+LYLFAE+NQ EI
Sbjct: 2253 VYLVGAALDIFQTLIVDLDTEGRYLFLNAIANQLRYPNTHTHYFSFIVLYLFAESNQHEI 2312

Query: 368  IQEQITRVLLERLVVNRPHPWGLLITFIELIKNPRYNFWSRSFTRCAPEIEKLFESVSRS 189
            IQEQITRVLLERL+VNRPHPWGLLITFIELIKNPRY FW+R+F RCAPEIEKLFESVSRS
Sbjct: 2313 IQEQITRVLLERLIVNRPHPWGLLITFIELIKNPRYQFWNRAFIRCAPEIEKLFESVSRS 2372

Query: 188  CGGPKPADDGVGSGGIPDNMH 126
            CGGPKP D+ + SG + ++ H
Sbjct: 2373 CGGPKPVDESMVSGWVSESAH 2393



 Score =  318 bits (816), Expect(2) = 0.0
 Identities = 165/246 (67%), Positives = 191/246 (77%), Gaps = 1/246 (0%)
 Frame = -1

Query: 2001 ELHNLVDALAKLAARPGSPESLQQLVEIAKNPSGNSAALSGLSVGKDDNNTSSSDEKATG 1822
            ELHNLVDALAKLAA+PGSPESLQQLVE+ KNP+    A S ++VGK+D    S D+KA+ 
Sbjct: 1779 ELHNLVDALAKLAAKPGSPESLQQLVEMVKNPAYILGAPSAINVGKEDKARISKDKKASV 1838

Query: 1821 VTGVSREDYTEAELVEPDPAAFREQVSALFVEWYQICELPGANDSACARYVLHLQQRGLL 1642
             + VS+ED++  E VEPDPA FREQVS LF EWYQICELPGAND+ CA ++L L Q GLL
Sbjct: 1839 HSPVSKEDFSNVESVEPDPAGFREQVSMLFAEWYQICELPGANDATCAHFILQLHQNGLL 1898

Query: 1641 KGDDTSDRFFLLLMEISVSHCLSSE-VINSGPSQSHQGQPLSFLAIDIYAKLVFSILKFC 1465
            KGDD +DRFF +L E+SV+HCLSSE  I S P    Q Q LSFLAIDIYAKLVF ILK  
Sbjct: 1899 KGDDMTDRFFRVLTELSVAHCLSSERTIPSSPQAPQQVQNLSFLAIDIYAKLVFLILK-- 1956

Query: 1464 SIDEGSGKLSLLPKVLAVIVKFIQKDADEKRTSFNPRPYFRIFINWILDLCFLDPVFDGA 1285
                GS KL LL K+L V V+FIQKDA+EK+TSFNPRPYFR+F+NW+LDL  LDPV DGA
Sbjct: 1957 ----GSSKLFLLSKILGVTVRFIQKDAEEKKTSFNPRPYFRLFVNWLLDLGSLDPVIDGA 2012

Query: 1284 NFQFLT 1267
            NFQ LT
Sbjct: 2013 NFQILT 2018


>ref|XP_009348857.1| PREDICTED: CCR4-NOT transcription complex subunit 1-like isoform X1
            [Pyrus x bretschneideri]
          Length = 2394

 Score =  609 bits (1571), Expect(2) = 0.0
 Identities = 303/381 (79%), Positives = 333/381 (87%), Gaps = 3/381 (0%)
 Frame = -2

Query: 1259 F*VLTALANAFHALQPLKIPGFSFAWLELISHRGFMPKLLTANAQKGWPYFQRLLVDLFQ 1080
            F +LTA ANAFH LQPLK+P FSFAWLEL+SHR FMPK+L  N QKGWPY QRLLV LFQ
Sbjct: 2015 FQILTAFANAFHVLQPLKVPTFSFAWLELVSHRSFMPKMLVGNGQKGWPYVQRLLVHLFQ 2074

Query: 1079 FMEPFLRNAELGESVQFLYKGTLRVLLVLLHDFPEFLCDYHFSFCDVIPPSCIQMRSIIL 900
            FMEPFLRNAELG  V F+YKGTLRVLLVLLHDFPEFLCDYHF+FCDVIPPSCIQMR+IIL
Sbjct: 2075 FMEPFLRNAELGVPVHFMYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIIL 2134

Query: 899  SAFPRNMRLPDPSTPNLKIDLLAEINQAPHILSEVDAALKAKQIKGDVDEYLKTRQQGXX 720
            SAFPRNMRLPDPSTPNLKIDLLAEI+Q+P ILSEVDAALKAKQ+K DVDEYLKTRQQG  
Sbjct: 2135 SAFPRNMRLPDPSTPNLKIDLLAEISQSPRILSEVDAALKAKQMKADVDEYLKTRQQGSS 2194

Query: 719  XXXXXXXXXXXXXSDAAHAGTRYNVPLINSLVLYVGMQAIQQLQARAPQHSQSIAS--MT 546
                         S+AA AGTRYNVPLINSLVLYVGMQAIQQLQAR P H+QS  +  +T
Sbjct: 2195 FLTELKQKLLLLPSEAASAGTRYNVPLINSLVLYVGMQAIQQLQARTP-HAQSTQTVPLT 2253

Query: 545  LFLVSAALDIFQTMIMDLDSEGRYLFLNAVANQLRYPNNHTHYFSFILLYLFAETNQ-EI 369
            ++LV AALDIFQT+I+DLD+EGRYLFLNA+ANQLRYPN HTHYFSFI+LYLFAE+NQ EI
Sbjct: 2254 VYLVGAALDIFQTLIVDLDTEGRYLFLNAIANQLRYPNTHTHYFSFIVLYLFAESNQHEI 2313

Query: 368  IQEQITRVLLERLVVNRPHPWGLLITFIELIKNPRYNFWSRSFTRCAPEIEKLFESVSRS 189
            IQEQITRVLLERL+VNRPHPWGLLITFIELIKNPRY FW+R+F RCAPEIEKLFESVSRS
Sbjct: 2314 IQEQITRVLLERLIVNRPHPWGLLITFIELIKNPRYQFWNRAFIRCAPEIEKLFESVSRS 2373

Query: 188  CGGPKPADDGVGSGGIPDNMH 126
            CGGPKP D+ + SG + ++ H
Sbjct: 2374 CGGPKPVDESMVSGWVSESAH 2394



 Score =  318 bits (816), Expect(2) = 0.0
 Identities = 165/246 (67%), Positives = 191/246 (77%), Gaps = 1/246 (0%)
 Frame = -1

Query: 2001 ELHNLVDALAKLAARPGSPESLQQLVEIAKNPSGNSAALSGLSVGKDDNNTSSSDEKATG 1822
            ELHNLVDALAKLAA+PGSPESLQQLVE+ KNP+    A S ++VGK+D    S D+KA+ 
Sbjct: 1780 ELHNLVDALAKLAAKPGSPESLQQLVEMVKNPAYILGAPSAINVGKEDKARISKDKKASV 1839

Query: 1821 VTGVSREDYTEAELVEPDPAAFREQVSALFVEWYQICELPGANDSACARYVLHLQQRGLL 1642
             + VS+ED++  E VEPDPA FREQVS LF EWYQICELPGAND+ CA ++L L Q GLL
Sbjct: 1840 HSPVSKEDFSNVESVEPDPAGFREQVSMLFAEWYQICELPGANDATCAHFILQLHQNGLL 1899

Query: 1641 KGDDTSDRFFLLLMEISVSHCLSSE-VINSGPSQSHQGQPLSFLAIDIYAKLVFSILKFC 1465
            KGDD +DRFF +L E+SV+HCLSSE  I S P    Q Q LSFLAIDIYAKLVF ILK  
Sbjct: 1900 KGDDMTDRFFRVLTELSVAHCLSSERTIPSSPQAPQQVQNLSFLAIDIYAKLVFLILK-- 1957

Query: 1464 SIDEGSGKLSLLPKVLAVIVKFIQKDADEKRTSFNPRPYFRIFINWILDLCFLDPVFDGA 1285
                GS KL LL K+L V V+FIQKDA+EK+TSFNPRPYFR+F+NW+LDL  LDPV DGA
Sbjct: 1958 ----GSSKLFLLSKILGVTVRFIQKDAEEKKTSFNPRPYFRLFVNWLLDLGSLDPVIDGA 2013

Query: 1284 NFQFLT 1267
            NFQ LT
Sbjct: 2014 NFQILT 2019


>ref|XP_009348859.1| PREDICTED: CCR4-NOT transcription complex subunit 1-like isoform X3
            [Pyrus x bretschneideri]
          Length = 2382

 Score =  609 bits (1571), Expect(2) = 0.0
 Identities = 303/381 (79%), Positives = 333/381 (87%), Gaps = 3/381 (0%)
 Frame = -2

Query: 1259 F*VLTALANAFHALQPLKIPGFSFAWLELISHRGFMPKLLTANAQKGWPYFQRLLVDLFQ 1080
            F +LTA ANAFH LQPLK+P FSFAWLEL+SHR FMPK+L  N QKGWPY QRLLV LFQ
Sbjct: 2003 FQILTAFANAFHVLQPLKVPTFSFAWLELVSHRSFMPKMLVGNGQKGWPYVQRLLVHLFQ 2062

Query: 1079 FMEPFLRNAELGESVQFLYKGTLRVLLVLLHDFPEFLCDYHFSFCDVIPPSCIQMRSIIL 900
            FMEPFLRNAELG  V F+YKGTLRVLLVLLHDFPEFLCDYHF+FCDVIPPSCIQMR+IIL
Sbjct: 2063 FMEPFLRNAELGVPVHFMYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIIL 2122

Query: 899  SAFPRNMRLPDPSTPNLKIDLLAEINQAPHILSEVDAALKAKQIKGDVDEYLKTRQQGXX 720
            SAFPRNMRLPDPSTPNLKIDLLAEI+Q+P ILSEVDAALKAKQ+K DVDEYLKTRQQG  
Sbjct: 2123 SAFPRNMRLPDPSTPNLKIDLLAEISQSPRILSEVDAALKAKQMKADVDEYLKTRQQGSS 2182

Query: 719  XXXXXXXXXXXXXSDAAHAGTRYNVPLINSLVLYVGMQAIQQLQARAPQHSQSIAS--MT 546
                         S+AA AGTRYNVPLINSLVLYVGMQAIQQLQAR P H+QS  +  +T
Sbjct: 2183 FLTELKQKLLLLPSEAASAGTRYNVPLINSLVLYVGMQAIQQLQARTP-HAQSTQTVPLT 2241

Query: 545  LFLVSAALDIFQTMIMDLDSEGRYLFLNAVANQLRYPNNHTHYFSFILLYLFAETNQ-EI 369
            ++LV AALDIFQT+I+DLD+EGRYLFLNA+ANQLRYPN HTHYFSFI+LYLFAE+NQ EI
Sbjct: 2242 VYLVGAALDIFQTLIVDLDTEGRYLFLNAIANQLRYPNTHTHYFSFIVLYLFAESNQHEI 2301

Query: 368  IQEQITRVLLERLVVNRPHPWGLLITFIELIKNPRYNFWSRSFTRCAPEIEKLFESVSRS 189
            IQEQITRVLLERL+VNRPHPWGLLITFIELIKNPRY FW+R+F RCAPEIEKLFESVSRS
Sbjct: 2302 IQEQITRVLLERLIVNRPHPWGLLITFIELIKNPRYQFWNRAFIRCAPEIEKLFESVSRS 2361

Query: 188  CGGPKPADDGVGSGGIPDNMH 126
            CGGPKP D+ + SG + ++ H
Sbjct: 2362 CGGPKPVDESMVSGWVSESAH 2382



 Score =  318 bits (816), Expect(2) = 0.0
 Identities = 165/246 (67%), Positives = 191/246 (77%), Gaps = 1/246 (0%)
 Frame = -1

Query: 2001 ELHNLVDALAKLAARPGSPESLQQLVEIAKNPSGNSAALSGLSVGKDDNNTSSSDEKATG 1822
            ELHNLVDALAKLAA+PGSPESLQQLVE+ KNP+    A S ++VGK+D    S D+KA+ 
Sbjct: 1768 ELHNLVDALAKLAAKPGSPESLQQLVEMVKNPAYILGAPSAINVGKEDKARISKDKKASV 1827

Query: 1821 VTGVSREDYTEAELVEPDPAAFREQVSALFVEWYQICELPGANDSACARYVLHLQQRGLL 1642
             + VS+ED++  E VEPDPA FREQVS LF EWYQICELPGAND+ CA ++L L Q GLL
Sbjct: 1828 HSPVSKEDFSNVESVEPDPAGFREQVSMLFAEWYQICELPGANDATCAHFILQLHQNGLL 1887

Query: 1641 KGDDTSDRFFLLLMEISVSHCLSSE-VINSGPSQSHQGQPLSFLAIDIYAKLVFSILKFC 1465
            KGDD +DRFF +L E+SV+HCLSSE  I S P    Q Q LSFLAIDIYAKLVF ILK  
Sbjct: 1888 KGDDMTDRFFRVLTELSVAHCLSSERTIPSSPQAPQQVQNLSFLAIDIYAKLVFLILK-- 1945

Query: 1464 SIDEGSGKLSLLPKVLAVIVKFIQKDADEKRTSFNPRPYFRIFINWILDLCFLDPVFDGA 1285
                GS KL LL K+L V V+FIQKDA+EK+TSFNPRPYFR+F+NW+LDL  LDPV DGA
Sbjct: 1946 ----GSSKLFLLSKILGVTVRFIQKDAEEKKTSFNPRPYFRLFVNWLLDLGSLDPVIDGA 2001

Query: 1284 NFQFLT 1267
            NFQ LT
Sbjct: 2002 NFQILT 2007


>ref|XP_010258904.1| PREDICTED: CCR4-NOT transcription complex subunit 1 isoform X4
            [Nelumbo nucifera]
          Length = 2448

 Score =  634 bits (1634), Expect(2) = 0.0
 Identities = 312/382 (81%), Positives = 337/382 (88%), Gaps = 4/382 (1%)
 Frame = -2

Query: 1259 F*VLTALANAFHALQPLKIPGFSFAWLELISHRGFMPKLLTANAQKGWPYFQRLLVDLFQ 1080
            F VLTA ANAFHALQPLK+PGFSFAWLEL+SHR +MPKLLT N QKGWP+ QRLLVDLF+
Sbjct: 2067 FQVLTAFANAFHALQPLKVPGFSFAWLELVSHRSYMPKLLTLNLQKGWPFVQRLLVDLFK 2126

Query: 1079 FMEPFLRNAELGESVQFLYKGTLRVLLVLLHDFPEFLCDYHFSFCDVIPPSCIQMRSIIL 900
            F+EP+LRNAELGE V FLYKGTLRVLLVLLHDFPEFLCDYHFSFCDVIPPSCIQMR++IL
Sbjct: 2127 FLEPYLRNAELGEPVHFLYKGTLRVLLVLLHDFPEFLCDYHFSFCDVIPPSCIQMRNVIL 2186

Query: 899  SAFPRNMRLPDPSTPNLKIDLLAEINQAPHILSEVDAALKAKQIKGDVDEYLKTRQQGXX 720
            SAFPRNMRLPDPSTPNLKIDLLAEI+Q+P ILSEVD ALK K +KGD+DEYLKTRQQG  
Sbjct: 2187 SAFPRNMRLPDPSTPNLKIDLLAEISQSPRILSEVDTALKGKLMKGDIDEYLKTRQQGSS 2246

Query: 719  XXXXXXXXXXXXXSDAAHAGTRYNVPLINSLVLYVGMQAIQQLQARAPQ-HSQSI---AS 552
                          +AA AGTRYNVPLINSLVLYVGMQAIQQLQA+ P  H+  +   AS
Sbjct: 2247 FLAELKQRLLLSQGEAAQAGTRYNVPLINSLVLYVGMQAIQQLQAKTPSPHAPPMAQGAS 2306

Query: 551  MTLFLVSAALDIFQTMIMDLDSEGRYLFLNAVANQLRYPNNHTHYFSFILLYLFAETNQE 372
            M +FLV AA+DIFQT+I DLD+EGRYLFLNAVANQLRYPNNHTHYFSF+LLYLFAETNQE
Sbjct: 2307 MDIFLVGAAMDIFQTLIADLDTEGRYLFLNAVANQLRYPNNHTHYFSFVLLYLFAETNQE 2366

Query: 371  IIQEQITRVLLERLVVNRPHPWGLLITFIELIKNPRYNFWSRSFTRCAPEIEKLFESVSR 192
            IIQEQITRVLLERL+VNRPHPWGLLITFIELIKNPRYNFW+RSFTRCAPEIEKLFESVSR
Sbjct: 2367 IIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPRYNFWNRSFTRCAPEIEKLFESVSR 2426

Query: 191  SCGGPKPADDGVGSGGIPDNMH 126
            SCGGPKP DD + SGGI DN H
Sbjct: 2427 SCGGPKPLDDAMVSGGISDNAH 2448



 Score =  294 bits (752), Expect(2) = 0.0
 Identities = 161/248 (64%), Positives = 183/248 (73%), Gaps = 3/248 (1%)
 Frame = -1

Query: 2001 ELHNLVDALAK--LAARPGSPESLQQLVEIAKNPSGNSAALSGLSVGKDDNNTSSSDEKA 1828
            ELHNLVDALAK  LA RPGSPESLQQLVEIA+NP+ NSAALSGL+VGKDD    S D+K 
Sbjct: 1835 ELHNLVDALAKFQLAMRPGSPESLQQLVEIARNPASNSAALSGLAVGKDDKARQSRDKKV 1894

Query: 1827 TGVTGVS-REDYTEAELVEPDPAAFREQVSALFVEWYQICELPGANDSACARYVLHLQQR 1651
                 +S REDY  AE    DPA FREQVS LF EWY+ICELPG ND+A   Y+  LQQ 
Sbjct: 1895 PSGRSMSGREDYNNAESAA-DPAGFREQVSVLFAEWYRICELPGTNDAAYTHYISQLQQN 1953

Query: 1650 GLLKGDDTSDRFFLLLMEISVSHCLSSEVINSGPSQSHQGQPLSFLAIDIYAKLVFSILK 1471
            GLLK DD SDRFF +L E+SV+HCLSSE + S      Q Q LSF+AID+YAKLV  I K
Sbjct: 1954 GLLKADDMSDRFFRILTELSVAHCLSSESLQS----PQQLQHLSFIAIDMYAKLVVLIFK 2009

Query: 1470 FCSIDEGSGKLSLLPKVLAVIVKFIQKDADEKRTSFNPRPYFRIFINWILDLCFLDPVFD 1291
                  GS KL LLPK+LAV V+ IQKDA+EK+ SFNPRPYFR+FINW+LDL   DP+ D
Sbjct: 2010 ------GSSKLLLLPKILAVTVRVIQKDAEEKKASFNPRPYFRLFINWLLDLGSPDPLLD 2063

Query: 1290 GANFQFLT 1267
            G+NFQ LT
Sbjct: 2064 GSNFQVLT 2071


>ref|XP_006445335.1| hypothetical protein CICLE_v10018430mg [Citrus clementina]
            gi|568875529|ref|XP_006490845.1| PREDICTED: CCR4-NOT
            transcription complex subunit 1-like isoform X1 [Citrus
            sinensis] gi|557547597|gb|ESR58575.1| hypothetical
            protein CICLE_v10018430mg [Citrus clementina]
          Length = 2425

 Score =  598 bits (1542), Expect(2) = 0.0
 Identities = 296/381 (77%), Positives = 323/381 (84%), Gaps = 3/381 (0%)
 Frame = -2

Query: 1259 F*VLTALANAFHALQPLKIPGFSFAWLELISHRGFMPKLLTANAQKGWPYFQRLLVDLFQ 1080
            F +L+A ANAFH LQPLK+P FSFAWLEL+SHR FMPKLL  N QKGWPY QRLLV+L Q
Sbjct: 2046 FQILSAFANAFHVLQPLKVPAFSFAWLELVSHRSFMPKLLIGNGQKGWPYIQRLLVNLLQ 2105

Query: 1079 FMEPFLRNAELGESVQFLYKGTLRVLLVLLHDFPEFLCDYHFSFCDVIPPSCIQMRSIIL 900
            F+EPFLRNAELG  V+FLYKGTLRVLLVLLHDFPEFLCDYHF+FCDVIPPSCIQMR+IIL
Sbjct: 2106 FLEPFLRNAELGVPVRFLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIIL 2165

Query: 899  SAFPRNMRLPDPSTPNLKIDLLAEINQAPHILSEVDAALKAKQIKGDVDEYLKTRQQGXX 720
            SAFPRNMRLPDPSTPNLKIDLL EI   P I SEVDAAL+AKQ++ DVD+YLKT Q G  
Sbjct: 2166 SAFPRNMRLPDPSTPNLKIDLLPEIRDPPRIFSEVDAALRAKQMRADVDDYLKTGQPGSS 2225

Query: 719  XXXXXXXXXXXXXSDAAHAGTRYNVPLINSLVLYVGMQAIQQLQARAPQHSQSI---ASM 549
                         S+AA AGTRYNVPLINSLVLYVGMQAI QLQ R   H+QS    +S+
Sbjct: 2226 FLSELKQKLLLPPSEAASAGTRYNVPLINSLVLYVGMQAIHQLQTRT-SHAQSTGNNSSL 2284

Query: 548  TLFLVSAALDIFQTMIMDLDSEGRYLFLNAVANQLRYPNNHTHYFSFILLYLFAETNQEI 369
            T FLVSAALDIFQT+I DLD+EGRYLFLNA ANQLRYPNNHTHYFSF+LLYL+AE NQEI
Sbjct: 2285 TAFLVSAALDIFQTLIQDLDTEGRYLFLNAAANQLRYPNNHTHYFSFVLLYLYAEANQEI 2344

Query: 368  IQEQITRVLLERLVVNRPHPWGLLITFIELIKNPRYNFWSRSFTRCAPEIEKLFESVSRS 189
            IQEQITRVL ERL+VNRPHPWGLLITFIELIKNPRYNFW++SF RCAPEIEKLFESV+RS
Sbjct: 2345 IQEQITRVLFERLIVNRPHPWGLLITFIELIKNPRYNFWNQSFIRCAPEIEKLFESVARS 2404

Query: 188  CGGPKPADDGVGSGGIPDNMH 126
            CGG KP DD + SG +PDN H
Sbjct: 2405 CGGLKPVDDSMVSGWVPDNTH 2425



 Score =  329 bits (844), Expect(2) = 0.0
 Identities = 164/246 (66%), Positives = 191/246 (77%), Gaps = 1/246 (0%)
 Frame = -1

Query: 2001 ELHNLVDALAKLAARPGSPESLQQLVEIAKNPSGNSAALSGLSVGKDDNNTSSSDEKATG 1822
            ELHNLVDALAKLAA+PGSPESLQQL+EI +NP+ N+ A SG +  KDD    S D+KA  
Sbjct: 1805 ELHNLVDALAKLAAKPGSPESLQQLIEIVRNPAANANASSGATTAKDDKARQSKDKKAHS 1864

Query: 1821 VTGVSREDYTEAELVEPDPAAFREQVSALFVEWYQICELPGANDSACARYVLHLQQRGLL 1642
             T  +REDY   E V+PDP  F EQVS LF EWYQICELPG+ND+AC RYVL L Q GLL
Sbjct: 1865 HTTANREDYNIPESVDPDPVGFPEQVSMLFAEWYQICELPGSNDAACTRYVLQLHQNGLL 1924

Query: 1641 KGDDTSDRFFLLLMEISVSHCLSSEVINSGPSQS-HQGQPLSFLAIDIYAKLVFSILKFC 1465
            KGDD +DRFF  L E+SV+HCLSSEVIN G  QS  Q Q LSFLAIDIYAKL+ SILK C
Sbjct: 1925 KGDDMTDRFFRRLTEVSVAHCLSSEVINPGTLQSPQQSQSLSFLAIDIYAKLMLSILKCC 1984

Query: 1464 SIDEGSGKLSLLPKVLAVIVKFIQKDADEKRTSFNPRPYFRIFINWILDLCFLDPVFDGA 1285
             +++GS K+ LL K+L V VKFI KDA+EK+ SFNPRPYFR+FINW+LD+  LDPV DG+
Sbjct: 1985 PVEQGSSKIFLLSKILTVTVKFILKDAEEKKASFNPRPYFRLFINWLLDMSSLDPVADGS 2044

Query: 1284 NFQFLT 1267
            NFQ L+
Sbjct: 2045 NFQILS 2050


>ref|XP_006445333.1| hypothetical protein CICLE_v10018430mg [Citrus clementina]
            gi|568875531|ref|XP_006490846.1| PREDICTED: CCR4-NOT
            transcription complex subunit 1-like isoform X2 [Citrus
            sinensis] gi|557547595|gb|ESR58573.1| hypothetical
            protein CICLE_v10018430mg [Citrus clementina]
          Length = 2421

 Score =  598 bits (1542), Expect(2) = 0.0
 Identities = 296/381 (77%), Positives = 323/381 (84%), Gaps = 3/381 (0%)
 Frame = -2

Query: 1259 F*VLTALANAFHALQPLKIPGFSFAWLELISHRGFMPKLLTANAQKGWPYFQRLLVDLFQ 1080
            F +L+A ANAFH LQPLK+P FSFAWLEL+SHR FMPKLL  N QKGWPY QRLLV+L Q
Sbjct: 2042 FQILSAFANAFHVLQPLKVPAFSFAWLELVSHRSFMPKLLIGNGQKGWPYIQRLLVNLLQ 2101

Query: 1079 FMEPFLRNAELGESVQFLYKGTLRVLLVLLHDFPEFLCDYHFSFCDVIPPSCIQMRSIIL 900
            F+EPFLRNAELG  V+FLYKGTLRVLLVLLHDFPEFLCDYHF+FCDVIPPSCIQMR+IIL
Sbjct: 2102 FLEPFLRNAELGVPVRFLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIIL 2161

Query: 899  SAFPRNMRLPDPSTPNLKIDLLAEINQAPHILSEVDAALKAKQIKGDVDEYLKTRQQGXX 720
            SAFPRNMRLPDPSTPNLKIDLL EI   P I SEVDAAL+AKQ++ DVD+YLKT Q G  
Sbjct: 2162 SAFPRNMRLPDPSTPNLKIDLLPEIRDPPRIFSEVDAALRAKQMRADVDDYLKTGQPGSS 2221

Query: 719  XXXXXXXXXXXXXSDAAHAGTRYNVPLINSLVLYVGMQAIQQLQARAPQHSQSI---ASM 549
                         S+AA AGTRYNVPLINSLVLYVGMQAI QLQ R   H+QS    +S+
Sbjct: 2222 FLSELKQKLLLPPSEAASAGTRYNVPLINSLVLYVGMQAIHQLQTRT-SHAQSTGNNSSL 2280

Query: 548  TLFLVSAALDIFQTMIMDLDSEGRYLFLNAVANQLRYPNNHTHYFSFILLYLFAETNQEI 369
            T FLVSAALDIFQT+I DLD+EGRYLFLNA ANQLRYPNNHTHYFSF+LLYL+AE NQEI
Sbjct: 2281 TAFLVSAALDIFQTLIQDLDTEGRYLFLNAAANQLRYPNNHTHYFSFVLLYLYAEANQEI 2340

Query: 368  IQEQITRVLLERLVVNRPHPWGLLITFIELIKNPRYNFWSRSFTRCAPEIEKLFESVSRS 189
            IQEQITRVL ERL+VNRPHPWGLLITFIELIKNPRYNFW++SF RCAPEIEKLFESV+RS
Sbjct: 2341 IQEQITRVLFERLIVNRPHPWGLLITFIELIKNPRYNFWNQSFIRCAPEIEKLFESVARS 2400

Query: 188  CGGPKPADDGVGSGGIPDNMH 126
            CGG KP DD + SG +PDN H
Sbjct: 2401 CGGLKPVDDSMVSGWVPDNTH 2421



 Score =  329 bits (844), Expect(2) = 0.0
 Identities = 164/246 (66%), Positives = 191/246 (77%), Gaps = 1/246 (0%)
 Frame = -1

Query: 2001 ELHNLVDALAKLAARPGSPESLQQLVEIAKNPSGNSAALSGLSVGKDDNNTSSSDEKATG 1822
            ELHNLVDALAKLAA+PGSPESLQQL+EI +NP+ N+ A SG +  KDD    S D+KA  
Sbjct: 1801 ELHNLVDALAKLAAKPGSPESLQQLIEIVRNPAANANASSGATTAKDDKARQSKDKKAHS 1860

Query: 1821 VTGVSREDYTEAELVEPDPAAFREQVSALFVEWYQICELPGANDSACARYVLHLQQRGLL 1642
             T  +REDY   E V+PDP  F EQVS LF EWYQICELPG+ND+AC RYVL L Q GLL
Sbjct: 1861 HTTANREDYNIPESVDPDPVGFPEQVSMLFAEWYQICELPGSNDAACTRYVLQLHQNGLL 1920

Query: 1641 KGDDTSDRFFLLLMEISVSHCLSSEVINSGPSQS-HQGQPLSFLAIDIYAKLVFSILKFC 1465
            KGDD +DRFF  L E+SV+HCLSSEVIN G  QS  Q Q LSFLAIDIYAKL+ SILK C
Sbjct: 1921 KGDDMTDRFFRRLTEVSVAHCLSSEVINPGTLQSPQQSQSLSFLAIDIYAKLMLSILKCC 1980

Query: 1464 SIDEGSGKLSLLPKVLAVIVKFIQKDADEKRTSFNPRPYFRIFINWILDLCFLDPVFDGA 1285
             +++GS K+ LL K+L V VKFI KDA+EK+ SFNPRPYFR+FINW+LD+  LDPV DG+
Sbjct: 1981 PVEQGSSKIFLLSKILTVTVKFILKDAEEKKASFNPRPYFRLFINWLLDMSSLDPVADGS 2040

Query: 1284 NFQFLT 1267
            NFQ L+
Sbjct: 2041 NFQILS 2046