BLASTX nr result

ID: Forsythia23_contig00010002 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia23_contig00010002
         (366 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006380481.1| hypothetical protein POPTR_0007s07020g [Popu...    59   1e-06
gb|KJB11834.1| hypothetical protein B456_002G039200 [Gossypium r...    57   5e-06
gb|KHF97894.1| Root meristem growth factor 9 -like protein [Goss...    56   8e-06
ref|XP_006382935.1| hypothetical protein POPTR_0005s08920g [Popu...    56   8e-06

>ref|XP_006380481.1| hypothetical protein POPTR_0007s07020g [Populus trichocarpa]
           gi|550334303|gb|ERP58278.1| hypothetical protein
           POPTR_0007s07020g [Populus trichocarpa]
          Length = 75

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 31/78 (39%), Positives = 43/78 (55%)
 Frame = -1

Query: 360 MATLPTKHIXXXXXXXFCFVSTCSQARRLKMENPQLTTTNTENGNGILGTKQEIPVPDIE 181
           MA +   H+        CFVSTC++AR L+  +        +N    +   +E  +PD+E
Sbjct: 1   MAKISRNHLVLVAFFLLCFVSTCARARTLREASNHGAEKKDQND---MFPSKENGLPDVE 57

Query: 180 DLAVMDYTPARKKTPIHN 127
           +L  MDYTPARKK PIHN
Sbjct: 58  ELVGMDYTPARKKPPIHN 75


>gb|KJB11834.1| hypothetical protein B456_002G039200 [Gossypium raimondii]
          Length = 73

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 32/83 (38%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
 Frame = -1

Query: 360 MATLPTKHIXXXXXXXFCFVSTCSQARRLKME-----NPQLTTTNTENGNGILGTKQEIP 196
           MA +P KH+        CF+ST   AR L  E     + ++ TT  E G           
Sbjct: 1   MARVPCKHVLLIVFIFLCFISTTPIARSLPSEMKKGLDDRVVTTENEGG----------A 50

Query: 195 VPDIEDLAVMDYTPARKKTPIHN 127
            PD+++L  MDYTPAR+K PIHN
Sbjct: 51  PPDVDELEAMDYTPARRKPPIHN 73


>gb|KHF97894.1| Root meristem growth factor 9 -like protein [Gossypium arboreum]
          Length = 73

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 32/83 (38%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
 Frame = -1

Query: 360 MATLPTKHIXXXXXXXFCFVSTCSQARRLKME-----NPQLTTTNTENGNGILGTKQEIP 196
           MA +P KH+        CF+ST   AR L  E     + ++ TT  E G           
Sbjct: 1   MARVPCKHVLLIVFIFLCFISTTPIARSLPSEMKKGLDDRVVTTENEGG----------A 50

Query: 195 VPDIEDLAVMDYTPARKKTPIHN 127
            PD+++L  MDYTPAR+K PIHN
Sbjct: 51  PPDVDELESMDYTPARRKPPIHN 73


>ref|XP_006382935.1| hypothetical protein POPTR_0005s08920g [Populus trichocarpa]
           gi|550338439|gb|ERP60732.1| hypothetical protein
           POPTR_0005s08920g [Populus trichocarpa]
          Length = 75

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 31/78 (39%), Positives = 41/78 (52%)
 Frame = -1

Query: 360 MATLPTKHIXXXXXXXFCFVSTCSQARRLKMENPQLTTTNTENGNGILGTKQEIPVPDIE 181
           MA +   H+        CFVSTC++AR L+  N         N    L   +E  + D++
Sbjct: 1   MAKISRNHLVLVAFFLLCFVSTCARARTLREVNNHEVEKKDHNN---LFPSKENGLHDVD 57

Query: 180 DLAVMDYTPARKKTPIHN 127
           +LA MDYTPA KK PIHN
Sbjct: 58  ELAGMDYTPASKKPPIHN 75


Top