BLASTX nr result
ID: Forsythia23_contig00008474
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia23_contig00008474
(774 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_012841243.1| PREDICTED: DNA-directed RNA polymerases II a... 236 2e-59
ref|XP_011097502.1| PREDICTED: DNA-directed RNA polymerases II a... 233 7e-59
ref|XP_011014255.1| PREDICTED: DNA-directed RNA polymerases II a... 233 1e-58
ref|XP_006381734.1| DNA-directed RNA polymerase family protein [... 233 1e-58
emb|CDP10286.1| unnamed protein product [Coffea canephora] 229 1e-57
ref|XP_009135802.1| PREDICTED: DNA-directed RNA polymerases II a... 228 2e-57
ref|XP_010511250.1| PREDICTED: DNA-directed RNA polymerases II a... 228 3e-57
ref|XP_010047920.1| PREDICTED: DNA-directed RNA polymerases II a... 228 3e-57
ref|XP_006298572.1| hypothetical protein CARUB_v10014656mg [Caps... 228 3e-57
ref|XP_002885498.1| ATRPABC24.3 [Arabidopsis lyrata subsp. lyrat... 228 3e-57
emb|CBI28035.3| unnamed protein product [Vitis vinifera] 228 4e-57
ref|XP_006451215.1| hypothetical protein CICLE_v10009504mg [Citr... 228 4e-57
ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases II a... 228 4e-57
ref|XP_010107375.1| DNA-directed RNA polymerases I, II, and III ... 227 7e-57
ref|XP_006406183.1| hypothetical protein EUTSA_v10021534mg [Eutr... 227 7e-57
ref|NP_188871.1| DNA-directed RNA polymerase NRPB5 [Arabidopsis ... 227 7e-57
ref|XP_012477196.1| PREDICTED: DNA-directed RNA polymerases II a... 226 1e-56
ref|XP_009775519.1| PREDICTED: DNA-directed RNA polymerases II a... 226 1e-56
ref|XP_009758424.1| PREDICTED: DNA-directed RNA polymerases II a... 226 1e-56
ref|XP_009606888.1| PREDICTED: DNA-directed RNA polymerases II a... 226 1e-56
>ref|XP_012841243.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Erythranthe guttatus] gi|848881798|ref|XP_012841244.1|
PREDICTED: DNA-directed RNA polymerases II and IV
subunit 5A [Erythranthe guttatus]
gi|604328677|gb|EYU34199.1| hypothetical protein
MIMGU_mgv1a013932mg [Erythranthe guttata]
Length = 206
Score = 236 bits (601), Expect = 2e-59
Identities = 117/135 (86%), Positives = 122/135 (90%)
Frame = -3
Query: 772 FPEEAKVGVKTMKTYTNRMKDENVHRAILVVQQNLTPFARTCISEISTKFHLEVFQEAEL 593
FPEE KVGVKTMKTYTNRMK+E VHRA+L+VQQNLTPFARTCISEISTKFHLEVFQEAE+
Sbjct: 72 FPEEPKVGVKTMKTYTNRMKEEGVHRAVLIVQQNLTPFARTCISEISTKFHLEVFQEAEM 131
Query: 592 LVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQITDPIARYYGLKRGHVVKIIR 413
L+NIKEHVLVPEHQ ERYTVKETQLPRIQITDPIARYYGLKRGHVVKIIR
Sbjct: 132 LINIKEHVLVPEHQVLTPEEKKTLLERYTVKETQLPRIQITDPIARYYGLKRGHVVKIIR 191
Query: 412 PSETAGRYVTYRYVV 368
PSETAGRYVTYRYVV
Sbjct: 192 PSETAGRYVTYRYVV 206
>ref|XP_011097502.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Sesamum indicum] gi|747046072|ref|XP_011097515.1|
PREDICTED: DNA-directed RNA polymerases II and IV
subunit 5A [Sesamum indicum]
Length = 206
Score = 233 bits (595), Expect = 7e-59
Identities = 119/135 (88%), Positives = 121/135 (89%)
Frame = -3
Query: 772 FPEEAKVGVKTMKTYTNRMKDENVHRAILVVQQNLTPFARTCISEISTKFHLEVFQEAEL 593
FPEE KVGVKTMKTYTNRMK+E VHRAILVVQQNLTPFARTCISEISTKFHLEVFQEAEL
Sbjct: 72 FPEEQKVGVKTMKTYTNRMKEEGVHRAILVVQQNLTPFARTCISEISTKFHLEVFQEAEL 131
Query: 592 LVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQITDPIARYYGLKRGHVVKIIR 413
LVNIKEHVLVP+HQ ERYTVKETQLPRIQITDPIARYYGLKRG VVKIIR
Sbjct: 132 LVNIKEHVLVPQHQVLTPEEKKTLLERYTVKETQLPRIQITDPIARYYGLKRGQVVKIIR 191
Query: 412 PSETAGRYVTYRYVV 368
PSETAGRYVTYRYVV
Sbjct: 192 PSETAGRYVTYRYVV 206
>ref|XP_011014255.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Populus euphratica]
Length = 206
Score = 233 bits (594), Expect = 1e-58
Identities = 119/135 (88%), Positives = 121/135 (89%)
Frame = -3
Query: 772 FPEEAKVGVKTMKTYTNRMKDENVHRAILVVQQNLTPFARTCISEISTKFHLEVFQEAEL 593
FPEEAKVGVKTMKTYTNRMK ENV RAILVVQQNLTPFARTCI+EISTKFHLEVFQEAEL
Sbjct: 72 FPEEAKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTKFHLEVFQEAEL 131
Query: 592 LVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQITDPIARYYGLKRGHVVKIIR 413
LVNIKEHVLVPEHQ ERYTVKETQLPRIQITDPIARYYGLKRG VVKIIR
Sbjct: 132 LVNIKEHVLVPEHQVLSNEEKKTLLERYTVKETQLPRIQITDPIARYYGLKRGQVVKIIR 191
Query: 412 PSETAGRYVTYRYVV 368
PSETAGRYVTYRYV+
Sbjct: 192 PSETAGRYVTYRYVI 206
>ref|XP_006381734.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|550336487|gb|ERP59531.1| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 206
Score = 233 bits (594), Expect = 1e-58
Identities = 119/135 (88%), Positives = 121/135 (89%)
Frame = -3
Query: 772 FPEEAKVGVKTMKTYTNRMKDENVHRAILVVQQNLTPFARTCISEISTKFHLEVFQEAEL 593
FPEEAKVGVKTMKTYTNRMK ENV RAILVVQQNLTPFARTCI+EISTKFHLEVFQEAEL
Sbjct: 72 FPEEAKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTKFHLEVFQEAEL 131
Query: 592 LVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQITDPIARYYGLKRGHVVKIIR 413
LVNIKEHVLVPEHQ ERYTVKETQLPRIQITDPIARYYGLKRG VVKIIR
Sbjct: 132 LVNIKEHVLVPEHQVLSNEEKKTLLERYTVKETQLPRIQITDPIARYYGLKRGQVVKIIR 191
Query: 412 PSETAGRYVTYRYVV 368
PSETAGRYVTYRYV+
Sbjct: 192 PSETAGRYVTYRYVI 206
>emb|CDP10286.1| unnamed protein product [Coffea canephora]
Length = 206
Score = 229 bits (585), Expect = 1e-57
Identities = 118/135 (87%), Positives = 120/135 (88%)
Frame = -3
Query: 772 FPEEAKVGVKTMKTYTNRMKDENVHRAILVVQQNLTPFARTCISEISTKFHLEVFQEAEL 593
FPEE KVGVKTMKTYTNRMK+ENV RAILVVQQNLTPFARTCISEISTKFHLEVFQEAEL
Sbjct: 72 FPEEPKVGVKTMKTYTNRMKNENVFRAILVVQQNLTPFARTCISEISTKFHLEVFQEAEL 131
Query: 592 LVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQITDPIARYYGLKRGHVVKIIR 413
LVNIK HVLVPEHQ ERYTVKETQLPRIQITDPIARYYGLKRG VVKIIR
Sbjct: 132 LVNIKNHVLVPEHQLLTPEEKKTLLERYTVKETQLPRIQITDPIARYYGLKRGQVVKIIR 191
Query: 412 PSETAGRYVTYRYVV 368
PSETAGRYVTYR+VV
Sbjct: 192 PSETAGRYVTYRFVV 206
>ref|XP_009135802.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Brassica rapa] gi|674897358|emb|CDY35542.1|
BnaA05g16440D [Brassica napus]
gi|674908831|emb|CDY24303.1| BnaC03g42760D [Brassica
napus] gi|674940287|emb|CDX92939.1| BnaA03g36610D
[Brassica napus]
Length = 206
Score = 228 bits (582), Expect = 2e-57
Identities = 115/135 (85%), Positives = 121/135 (89%)
Frame = -3
Query: 772 FPEEAKVGVKTMKTYTNRMKDENVHRAILVVQQNLTPFARTCISEISTKFHLEVFQEAEL 593
FP+EAKVGVKTMK YTNRMK ENV+RAILVVQQNLTPFARTCISEIS+KFHLEVFQEAE+
Sbjct: 72 FPDEAKVGVKTMKVYTNRMKSENVYRAILVVQQNLTPFARTCISEISSKFHLEVFQEAEM 131
Query: 592 LVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQITDPIARYYGLKRGHVVKIIR 413
LVNIKEHVLVPEHQ ERYTVKETQLPRIQ+TDPIARY+GLKRG VVKIIR
Sbjct: 132 LVNIKEHVLVPEHQVLTTEEKKTLLERYTVKETQLPRIQVTDPIARYFGLKRGQVVKIIR 191
Query: 412 PSETAGRYVTYRYVV 368
PSETAGRYVTYRYVV
Sbjct: 192 PSETAGRYVTYRYVV 206
>ref|XP_010511250.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Camelina sativa] gi|727586940|ref|XP_010466511.1|
PREDICTED: DNA-directed RNA polymerases II and IV
subunit 5A [Camelina sativa]
gi|727634336|ref|XP_010488256.1| PREDICTED: DNA-directed
RNA polymerases II and IV subunit 5A [Camelina sativa]
Length = 205
Score = 228 bits (581), Expect = 3e-57
Identities = 115/135 (85%), Positives = 121/135 (89%)
Frame = -3
Query: 772 FPEEAKVGVKTMKTYTNRMKDENVHRAILVVQQNLTPFARTCISEISTKFHLEVFQEAEL 593
FP+EAKVGVKTMK YTNRMK ENV+RAILVVQQNLTPFARTCISEIS+KFHLEVFQEAE+
Sbjct: 71 FPDEAKVGVKTMKMYTNRMKSENVYRAILVVQQNLTPFARTCISEISSKFHLEVFQEAEM 130
Query: 592 LVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQITDPIARYYGLKRGHVVKIIR 413
LVNIKEHVLVPEHQ ERYTVKETQLPRIQ+TDPIARY+GLKRG VVKIIR
Sbjct: 131 LVNIKEHVLVPEHQVLTTEEKKTLLERYTVKETQLPRIQVTDPIARYFGLKRGQVVKIIR 190
Query: 412 PSETAGRYVTYRYVV 368
PSETAGRYVTYRYVV
Sbjct: 191 PSETAGRYVTYRYVV 205
>ref|XP_010047920.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Eucalyptus grandis] gi|629115273|gb|KCW79948.1|
hypothetical protein EUGRSUZ_C01278 [Eucalyptus grandis]
Length = 220
Score = 228 bits (581), Expect = 3e-57
Identities = 115/135 (85%), Positives = 118/135 (87%)
Frame = -3
Query: 772 FPEEAKVGVKTMKTYTNRMKDENVHRAILVVQQNLTPFARTCISEISTKFHLEVFQEAEL 593
FPEEAKVGVKTMKTYT RM ENV RAIL VQQNLTPFARTCISEISTKFHLEVFQEAEL
Sbjct: 86 FPEEAKVGVKTMKTYTTRMNSENVFRAILAVQQNLTPFARTCISEISTKFHLEVFQEAEL 145
Query: 592 LVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQITDPIARYYGLKRGHVVKIIR 413
LVNIKEHVLVPEHQ +RYTVKETQLPRIQ+TDP+ARYYGLKRG VVKIIR
Sbjct: 146 LVNIKEHVLVPEHQVLANEEKKTLLQRYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIR 205
Query: 412 PSETAGRYVTYRYVV 368
PSETAGRYVTYRYVV
Sbjct: 206 PSETAGRYVTYRYVV 220
>ref|XP_006298572.1| hypothetical protein CARUB_v10014656mg [Capsella rubella]
gi|482567281|gb|EOA31470.1| hypothetical protein
CARUB_v10014656mg [Capsella rubella]
Length = 205
Score = 228 bits (581), Expect = 3e-57
Identities = 115/135 (85%), Positives = 121/135 (89%)
Frame = -3
Query: 772 FPEEAKVGVKTMKTYTNRMKDENVHRAILVVQQNLTPFARTCISEISTKFHLEVFQEAEL 593
FP+EAKVGVKTMK YTNRMK ENV+RAILVVQQNLTPFARTCISEIS+KFHLEVFQEAE+
Sbjct: 71 FPDEAKVGVKTMKMYTNRMKSENVYRAILVVQQNLTPFARTCISEISSKFHLEVFQEAEM 130
Query: 592 LVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQITDPIARYYGLKRGHVVKIIR 413
LVNIKEHVLVPEHQ ERYTVKETQLPRIQ+TDPIARY+GLKRG VVKIIR
Sbjct: 131 LVNIKEHVLVPEHQVLTSEEKKTLLERYTVKETQLPRIQVTDPIARYFGLKRGQVVKIIR 190
Query: 412 PSETAGRYVTYRYVV 368
PSETAGRYVTYRYVV
Sbjct: 191 PSETAGRYVTYRYVV 205
>ref|XP_002885498.1| ATRPABC24.3 [Arabidopsis lyrata subsp. lyrata]
gi|297331338|gb|EFH61757.1| ATRPABC24.3 [Arabidopsis
lyrata subsp. lyrata]
Length = 205
Score = 228 bits (581), Expect = 3e-57
Identities = 115/135 (85%), Positives = 121/135 (89%)
Frame = -3
Query: 772 FPEEAKVGVKTMKTYTNRMKDENVHRAILVVQQNLTPFARTCISEISTKFHLEVFQEAEL 593
FP+EAKVGVKTMK YTNRMK ENV+RAILVVQQNLTPFARTCISEIS+KFHLEVFQEAE+
Sbjct: 71 FPDEAKVGVKTMKMYTNRMKSENVYRAILVVQQNLTPFARTCISEISSKFHLEVFQEAEM 130
Query: 592 LVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQITDPIARYYGLKRGHVVKIIR 413
LVNIKEHVLVPEHQ ERYTVKETQLPRIQ+TDPIARY+GLKRG VVKIIR
Sbjct: 131 LVNIKEHVLVPEHQVLTTEEKKTLLERYTVKETQLPRIQVTDPIARYFGLKRGQVVKIIR 190
Query: 412 PSETAGRYVTYRYVV 368
PSETAGRYVTYRYVV
Sbjct: 191 PSETAGRYVTYRYVV 205
>emb|CBI28035.3| unnamed protein product [Vitis vinifera]
Length = 186
Score = 228 bits (580), Expect = 4e-57
Identities = 115/135 (85%), Positives = 120/135 (88%)
Frame = -3
Query: 772 FPEEAKVGVKTMKTYTNRMKDENVHRAILVVQQNLTPFARTCISEISTKFHLEVFQEAEL 593
FPEE KVGVKTMKTYTNRMK ENV RAILVVQQNLTPFARTCI+EISTKFHLEVFQEAEL
Sbjct: 52 FPEEQKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTKFHLEVFQEAEL 111
Query: 592 LVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQITDPIARYYGLKRGHVVKIIR 413
LVNIKEHVLVPEHQ ERYTVKETQLPRIQ++DPIARY+GLKRG VVKIIR
Sbjct: 112 LVNIKEHVLVPEHQVLTSEEKKTLLERYTVKETQLPRIQVSDPIARYFGLKRGQVVKIIR 171
Query: 412 PSETAGRYVTYRYVV 368
PSETAGRY+TYRYVV
Sbjct: 172 PSETAGRYITYRYVV 186
>ref|XP_006451215.1| hypothetical protein CICLE_v10009504mg [Citrus clementina]
gi|567918420|ref|XP_006451216.1| hypothetical protein
CICLE_v10009504mg [Citrus clementina]
gi|568843556|ref|XP_006475670.1| PREDICTED: DNA-directed
RNA polymerases II and IV subunit 5A-like isoform X1
[Citrus sinensis] gi|568843558|ref|XP_006475671.1|
PREDICTED: DNA-directed RNA polymerases II and IV
subunit 5A-like isoform X2 [Citrus sinensis]
gi|568843560|ref|XP_006475672.1| PREDICTED: DNA-directed
RNA polymerases II and IV subunit 5A-like isoform X3
[Citrus sinensis] gi|557554441|gb|ESR64455.1|
hypothetical protein CICLE_v10009504mg [Citrus
clementina] gi|557554442|gb|ESR64456.1| hypothetical
protein CICLE_v10009504mg [Citrus clementina]
Length = 206
Score = 228 bits (580), Expect = 4e-57
Identities = 115/135 (85%), Positives = 118/135 (87%)
Frame = -3
Query: 772 FPEEAKVGVKTMKTYTNRMKDENVHRAILVVQQNLTPFARTCISEISTKFHLEVFQEAEL 593
FP+E KVGVKTMKTYTNRMK ENV RAILVVQQNLTPFARTCI EIS KFHLEVFQEAEL
Sbjct: 72 FPDEQKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCIQEISAKFHLEVFQEAEL 131
Query: 592 LVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQITDPIARYYGLKRGHVVKIIR 413
LVNIKEHVLVPEHQ +RYTVKETQLPRIQ+TDPIARYYGLKRG VVKIIR
Sbjct: 132 LVNIKEHVLVPEHQVLTNEEKKTLLKRYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIR 191
Query: 412 PSETAGRYVTYRYVV 368
PSETAGRYVTYRYVV
Sbjct: 192 PSETAGRYVTYRYVV 206
>ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A [Vitis
vinifera] gi|225445172|ref|XP_002284110.1| PREDICTED:
DNA-directed RNA polymerases II and IV subunit 5A [Vitis
vinifera]
Length = 206
Score = 228 bits (580), Expect = 4e-57
Identities = 115/135 (85%), Positives = 120/135 (88%)
Frame = -3
Query: 772 FPEEAKVGVKTMKTYTNRMKDENVHRAILVVQQNLTPFARTCISEISTKFHLEVFQEAEL 593
FPEE KVGVKTMKTYTNRMK ENV RAILVVQQNLTPFARTCI+EISTKFHLEVFQEAEL
Sbjct: 72 FPEEQKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTKFHLEVFQEAEL 131
Query: 592 LVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQITDPIARYYGLKRGHVVKIIR 413
LVNIKEHVLVPEHQ ERYTVKETQLPRIQ++DPIARY+GLKRG VVKIIR
Sbjct: 132 LVNIKEHVLVPEHQVLTSEEKKTLLERYTVKETQLPRIQVSDPIARYFGLKRGQVVKIIR 191
Query: 412 PSETAGRYVTYRYVV 368
PSETAGRY+TYRYVV
Sbjct: 192 PSETAGRYITYRYVV 206
>ref|XP_010107375.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Morus
notabilis] gi|587928674|gb|EXC15864.1| DNA-directed RNA
polymerases I, II, and III subunit RPABC1 [Morus
notabilis]
Length = 253
Score = 227 bits (578), Expect = 7e-57
Identities = 115/134 (85%), Positives = 118/134 (88%)
Frame = -3
Query: 772 FPEEAKVGVKTMKTYTNRMKDENVHRAILVVQQNLTPFARTCISEISTKFHLEVFQEAEL 593
FPEE KVGVKTMKTY NRMK ENV RA+LVVQQNLTPFARTCISEISTKFHLEVFQEAEL
Sbjct: 72 FPEEQKVGVKTMKTYINRMKSENVLRAVLVVQQNLTPFARTCISEISTKFHLEVFQEAEL 131
Query: 592 LVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQITDPIARYYGLKRGHVVKIIR 413
LVNIKEHVLVPEHQ ERYTVKETQLPRIQ+TDPIARYYGLKRG VVKIIR
Sbjct: 132 LVNIKEHVLVPEHQVLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIR 191
Query: 412 PSETAGRYVTYRYV 371
PSETAGRY+TYRYV
Sbjct: 192 PSETAGRYITYRYV 205
>ref|XP_006406183.1| hypothetical protein EUTSA_v10021534mg [Eutrema salsugineum]
gi|557107329|gb|ESQ47636.1| hypothetical protein
EUTSA_v10021534mg [Eutrema salsugineum]
Length = 206
Score = 227 bits (578), Expect = 7e-57
Identities = 115/135 (85%), Positives = 120/135 (88%)
Frame = -3
Query: 772 FPEEAKVGVKTMKTYTNRMKDENVHRAILVVQQNLTPFARTCISEISTKFHLEVFQEAEL 593
FP+EAKVGVKTMK YTNRMK ENV RAILVVQQNLTPFARTCISEIS+KFHLEVFQEAE+
Sbjct: 72 FPDEAKVGVKTMKMYTNRMKSENVFRAILVVQQNLTPFARTCISEISSKFHLEVFQEAEM 131
Query: 592 LVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQITDPIARYYGLKRGHVVKIIR 413
LVNIKEHVLVPEHQ ERYTVKETQLPRIQ+TDPIARY+GLKRG VVKIIR
Sbjct: 132 LVNIKEHVLVPEHQVLTTEEKKTLLERYTVKETQLPRIQVTDPIARYFGLKRGQVVKIIR 191
Query: 412 PSETAGRYVTYRYVV 368
PSETAGRYVTYRYVV
Sbjct: 192 PSETAGRYVTYRYVV 206
>ref|NP_188871.1| DNA-directed RNA polymerase NRPB5 [Arabidopsis thaliana]
gi|75275037|sp|O81098.1|RPB5A_ARATH RecName:
Full=DNA-directed RNA polymerases II and IV subunit 5A;
Short=RPB5a; AltName: Full=DNA-directed RNA polymerase
II subunit E; AltName: Full=RNA polymerase I, II and III
24.3 kDa subunit; Short=AtRPB24.3
gi|13899113|gb|AAK48978.1|AF370551_1 RNA polymerase I,
II and III 24.3 kDa subunit [Arabidopsis thaliana]
gi|15724322|gb|AAL06554.1|AF412101_1 AT3g22320/MCB17_5
[Arabidopsis thaliana] gi|3372233|gb|AAC28253.1| RNA
polymerase I, II and III 24.3 kDa subunit [Arabidopsis
thaliana] gi|9293866|dbj|BAB01769.1| RNA polymerase I,
II and III 24.3 kDa subunit [Arabidopsis thaliana]
gi|21554280|gb|AAM63355.1| RNA polymerase I, II and III
24.3 kDa subunit [Arabidopsis thaliana]
gi|25083949|gb|AAN72141.1| RNA polymerase I, II and III
24.3 kDa subunit [Arabidopsis thaliana]
gi|332643100|gb|AEE76621.1| DNA-directed RNA polymerase
NRPB5 [Arabidopsis thaliana]
Length = 205
Score = 227 bits (578), Expect = 7e-57
Identities = 115/135 (85%), Positives = 120/135 (88%)
Frame = -3
Query: 772 FPEEAKVGVKTMKTYTNRMKDENVHRAILVVQQNLTPFARTCISEISTKFHLEVFQEAEL 593
FP+EAKVGVKTMK YTNRMK ENV RAILVVQQNLTPFARTCISEIS+KFHLEVFQEAE+
Sbjct: 71 FPDEAKVGVKTMKMYTNRMKSENVFRAILVVQQNLTPFARTCISEISSKFHLEVFQEAEM 130
Query: 592 LVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQITDPIARYYGLKRGHVVKIIR 413
LVNIKEHVLVPEHQ ERYTVKETQLPRIQ+TDPIARY+GLKRG VVKIIR
Sbjct: 131 LVNIKEHVLVPEHQVLTTEEKKTLLERYTVKETQLPRIQVTDPIARYFGLKRGQVVKIIR 190
Query: 412 PSETAGRYVTYRYVV 368
PSETAGRYVTYRYVV
Sbjct: 191 PSETAGRYVTYRYVV 205
>ref|XP_012477196.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Gossypium raimondii] gi|823154631|ref|XP_012477197.1|
PREDICTED: DNA-directed RNA polymerases II and IV
subunit 5A [Gossypium raimondii]
gi|728836967|gb|KHG16410.1| dna-directed rna polymerases
i, ii, and iii subunit rpabc1 [Gossypium arboreum]
gi|763759819|gb|KJB27150.1| hypothetical protein
B456_004G280900 [Gossypium raimondii]
gi|763759820|gb|KJB27151.1| hypothetical protein
B456_004G280900 [Gossypium raimondii]
gi|763759821|gb|KJB27152.1| hypothetical protein
B456_004G280900 [Gossypium raimondii]
Length = 206
Score = 226 bits (576), Expect = 1e-56
Identities = 112/135 (82%), Positives = 119/135 (88%)
Frame = -3
Query: 772 FPEEAKVGVKTMKTYTNRMKDENVHRAILVVQQNLTPFARTCISEISTKFHLEVFQEAEL 593
FPEEAKVGVKTMKTYTNRMK ENV RAILVVQQNLTPFARTCI+EIS+KFHLEVFQEAEL
Sbjct: 72 FPEEAKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISSKFHLEVFQEAEL 131
Query: 592 LVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQITDPIARYYGLKRGHVVKIIR 413
LVN+KEH LVPEHQ RYTVKETQLPRIQ++DPIARY+GLKRG VVKIIR
Sbjct: 132 LVNVKEHALVPEHQVLTNEEKKTLLHRYTVKETQLPRIQVSDPIARYFGLKRGQVVKIIR 191
Query: 412 PSETAGRYVTYRYVV 368
PSETAGRY+TYRYVV
Sbjct: 192 PSETAGRYITYRYVV 206
>ref|XP_009775519.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Nicotiana sylvestris] gi|698573867|ref|XP_009775520.1|
PREDICTED: DNA-directed RNA polymerases II and IV
subunit 5A-like [Nicotiana sylvestris]
Length = 206
Score = 226 bits (576), Expect = 1e-56
Identities = 116/135 (85%), Positives = 119/135 (88%)
Frame = -3
Query: 772 FPEEAKVGVKTMKTYTNRMKDENVHRAILVVQQNLTPFARTCISEISTKFHLEVFQEAEL 593
FPEEAKVGVKTMKTYT RMK E+V +AILVVQQNLTPFARTCISEISTKFHLEVFQEAEL
Sbjct: 72 FPEEAKVGVKTMKTYTERMKKEDVFQAILVVQQNLTPFARTCISEISTKFHLEVFQEAEL 131
Query: 592 LVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQITDPIARYYGLKRGHVVKIIR 413
LVNIK HVLVPEHQ ERYTVKETQLPRIQITDPIARYYGLKRG VVKIIR
Sbjct: 132 LVNIKNHVLVPEHQPLTPEEKKTLLERYTVKETQLPRIQITDPIARYYGLKRGQVVKIIR 191
Query: 412 PSETAGRYVTYRYVV 368
PSETAGRY+TYRYVV
Sbjct: 192 PSETAGRYITYRYVV 206
>ref|XP_009758424.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
isoform X1 [Nicotiana sylvestris]
gi|698523238|ref|XP_009758425.1| PREDICTED: DNA-directed
RNA polymerases II and IV subunit 5A-like isoform X1
[Nicotiana sylvestris]
Length = 206
Score = 226 bits (576), Expect = 1e-56
Identities = 116/135 (85%), Positives = 119/135 (88%)
Frame = -3
Query: 772 FPEEAKVGVKTMKTYTNRMKDENVHRAILVVQQNLTPFARTCISEISTKFHLEVFQEAEL 593
FPEEAKVGVKTMKTYT RMK E+V +AILVVQQNLTPFARTCISEISTKFHLEVFQEAEL
Sbjct: 72 FPEEAKVGVKTMKTYTERMKKEDVFQAILVVQQNLTPFARTCISEISTKFHLEVFQEAEL 131
Query: 592 LVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQITDPIARYYGLKRGHVVKIIR 413
LVNIK HVLVPEHQ ERYTVKETQLPRIQITDPIARYYGLKRG VVKIIR
Sbjct: 132 LVNIKNHVLVPEHQPLTPEEKKTLLERYTVKETQLPRIQITDPIARYYGLKRGQVVKIIR 191
Query: 412 PSETAGRYVTYRYVV 368
PSETAGRY+TYRYVV
Sbjct: 192 PSETAGRYITYRYVV 206
>ref|XP_009606888.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
isoform X1 [Nicotiana tomentosiformis]
gi|697106108|ref|XP_009606889.1| PREDICTED: DNA-directed
RNA polymerases II and IV subunit 5A-like isoform X1
[Nicotiana tomentosiformis]
gi|697106110|ref|XP_009606890.1| PREDICTED: DNA-directed
RNA polymerases II and IV subunit 5A-like isoform X1
[Nicotiana tomentosiformis]
gi|697106112|ref|XP_009606891.1| PREDICTED: DNA-directed
RNA polymerases II and IV subunit 5A-like isoform X1
[Nicotiana tomentosiformis]
Length = 206
Score = 226 bits (576), Expect = 1e-56
Identities = 116/135 (85%), Positives = 119/135 (88%)
Frame = -3
Query: 772 FPEEAKVGVKTMKTYTNRMKDENVHRAILVVQQNLTPFARTCISEISTKFHLEVFQEAEL 593
FPEEAKVGVKTMKTYT RMK E+V +AILVVQQNLTPFARTCISEISTKFHLEVFQEAEL
Sbjct: 72 FPEEAKVGVKTMKTYTERMKKEDVFQAILVVQQNLTPFARTCISEISTKFHLEVFQEAEL 131
Query: 592 LVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQITDPIARYYGLKRGHVVKIIR 413
LVNIK HVLVPEHQ ERYTVKETQLPRIQITDPIARYYGLKRG VVKIIR
Sbjct: 132 LVNIKNHVLVPEHQPLTPEEKKTLLERYTVKETQLPRIQITDPIARYYGLKRGQVVKIIR 191
Query: 412 PSETAGRYVTYRYVV 368
PSETAGRY+TYRYVV
Sbjct: 192 PSETAGRYITYRYVV 206