BLASTX nr result

ID: Forsythia23_contig00008470 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia23_contig00008470
         (992 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009618133.1| PREDICTED: E3 ubiquitin-protein ligase UPL3 ...    63   3e-07
emb|CDO96920.1| unnamed protein product [Coffea canephora]             63   3e-07
ref|XP_006359694.1| PREDICTED: E3 ubiquitin-protein ligase UPL3-...    63   4e-07
ref|XP_009771655.1| PREDICTED: E3 ubiquitin-protein ligase UPL3-...    62   5e-07
ref|XP_011088599.1| PREDICTED: E3 ubiquitin-protein ligase UPL3 ...    62   8e-07
ref|XP_004231037.1| PREDICTED: E3 ubiquitin-protein ligase UPL3 ...    61   1e-06

>ref|XP_009618133.1| PREDICTED: E3 ubiquitin-protein ligase UPL3 [Nicotiana
           tomentosiformis]
          Length = 1895

 Score = 63.2 bits (152), Expect = 3e-07
 Identities = 46/85 (54%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
 Frame = -2

Query: 244 SSTLMDPTPEASALSASTTRGRRGKNPXXXXXXXXXXXXXXKGKEKEHESRVRD----RD 77
           SST MD T E+S    S TR RRGKNP               GKEKEHE RVRD    RD
Sbjct: 68  SSTPMDSTNESSG---SGTRTRRGKNPSHGSDKDNNNLDK--GKEKEHEVRVRDKNRDRD 122

Query: 76  RETERSSGLNIDSHVGXXXXXDSEG 2
           RE ERS GLNIDS  G     DSEG
Sbjct: 123 REAERSLGLNIDSGGGEDDDNDSEG 147


>emb|CDO96920.1| unnamed protein product [Coffea canephora]
          Length = 1911

 Score = 63.2 bits (152), Expect = 3e-07
 Identities = 46/92 (50%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
 Frame = -2

Query: 259 KDSVVSSTLMDPTPEASALSASTTRGRRGKNPXXXXXXXXXXXXXXKGKEKEHESRV--- 89
           KDS+ SST MD T E+S    S TR RRGKNP               GKEKEHE RV   
Sbjct: 67  KDSLASSTPMDSTNESSG---SGTRSRRGKNPSHASDKDNSDK----GKEKEHEVRVRER 119

Query: 88  ---RDRDRETERSSGLNIDSHVGXXXXXDSEG 2
              R+RDR+ ERS GLNIDS        DSEG
Sbjct: 120 ERERERDRDAERSLGLNIDSGGCDDDDNDSEG 151


>ref|XP_006359694.1| PREDICTED: E3 ubiquitin-protein ligase UPL3-like [Solanum
           tuberosum]
          Length = 1895

 Score = 62.8 bits (151), Expect = 4e-07
 Identities = 46/89 (51%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
 Frame = -2

Query: 259 KDSVVSSTLMDPTPEASALSASTTRGRRGKNPXXXXXXXXXXXXXXKGKEKEHESRVRD- 83
           +DS+ SST MD T E+S    S +R RRGKNP               GKEKEHE RVRD 
Sbjct: 65  QDSLASSTPMDSTHESSG---SASRNRRGKNPSHGSDKDNLDK----GKEKEHEVRVRDR 117

Query: 82  -RDRETERSSGLNIDS-HVGXXXXXDSEG 2
            RDRE ER  GLNIDS   G     DSEG
Sbjct: 118 ERDREAERILGLNIDSGGAGEDDDNDSEG 146


>ref|XP_009771655.1| PREDICTED: E3 ubiquitin-protein ligase UPL3-like [Nicotiana
           sylvestris]
          Length = 1897

 Score = 62.4 bits (150), Expect = 5e-07
 Identities = 46/87 (52%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
 Frame = -2

Query: 244 SSTLMDPTPEASALSASTTRGRRGKNPXXXXXXXXXXXXXXKGKEKEHESRVRD------ 83
           SST MD T E+S    S TR RRGKNP               GKEKEHE RVRD      
Sbjct: 68  SSTPMDSTNESSG---SGTRTRRGKNPSHGSDKDNNNLDK--GKEKEHEVRVRDKNRDRD 122

Query: 82  RDRETERSSGLNIDSHVGXXXXXDSEG 2
           RDRE ERS GLNIDS  G     DSEG
Sbjct: 123 RDREAERSLGLNIDSGGGEDDDNDSEG 149


>ref|XP_011088599.1| PREDICTED: E3 ubiquitin-protein ligase UPL3 [Sesamum indicum]
           gi|747082547|ref|XP_011088600.1| PREDICTED: E3
           ubiquitin-protein ligase UPL3 [Sesamum indicum]
          Length = 1890

 Score = 61.6 bits (148), Expect = 8e-07
 Identities = 39/80 (48%), Positives = 40/80 (50%)
 Frame = -2

Query: 241 STLMDPTPEASALSASTTRGRRGKNPXXXXXXXXXXXXXXKGKEKEHESRVRDRDRETER 62
           ST MDP  E S  SASTTRGRRGKNP                 +K  E     R RETER
Sbjct: 54  STSMDPALEPSTASASTTRGRRGKNPSGAQNWDHNNKKENTNLDKGKEKEPEIRHRETER 113

Query: 61  SSGLNIDSHVGXXXXXDSEG 2
           S GLNIDS        DSEG
Sbjct: 114 SLGLNIDSLEADYEDNDSEG 133


>ref|XP_004231037.1| PREDICTED: E3 ubiquitin-protein ligase UPL3 [Solanum lycopersicum]
           gi|723666356|ref|XP_010315379.1| PREDICTED: E3
           ubiquitin-protein ligase UPL3 [Solanum lycopersicum]
          Length = 1893

 Score = 61.2 bits (147), Expect = 1e-06
 Identities = 40/76 (52%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
 Frame = -2

Query: 259 KDSVVSSTLMDPTPEASALSASTTRGRRGKNPXXXXXXXXXXXXXXKGKEKEHESRVRD- 83
           +DS+ SST MD T E+S    S +R RRGKNP               GKEKEHE RVRD 
Sbjct: 65  QDSLASSTPMDSTNESSG---SASRNRRGKNPSHGSDRDNLDK----GKEKEHEVRVRDK 117

Query: 82  -RDRETERSSGLNIDS 38
            RDR+ ER  GLNIDS
Sbjct: 118 ERDRDAERILGLNIDS 133


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