BLASTX nr result
ID: Forsythia23_contig00008097
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia23_contig00008097
(486 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011082507.1| PREDICTED: U1 small nuclear ribonucleoprotei... 184 3e-44
ref|XP_009763219.1| PREDICTED: U1 small nuclear ribonucleoprotei... 173 5e-41
ref|XP_009604448.1| PREDICTED: U1 small nuclear ribonucleoprotei... 172 6e-41
ref|XP_006362977.1| PREDICTED: U1 small nuclear ribonucleoprotei... 171 2e-40
ref|NP_001234106.1| U1 small nuclear ribonucleoprotein C-like [S... 168 1e-39
emb|CDP03560.1| unnamed protein product [Coffea canephora] 156 4e-36
ref|XP_012833427.1| PREDICTED: U1 small nuclear ribonucleoprotei... 153 4e-35
ref|XP_012836623.1| PREDICTED: U1 small nuclear ribonucleoprotei... 153 4e-35
ref|XP_002270246.1| PREDICTED: U1 small nuclear ribonucleoprotei... 135 1e-29
ref|XP_011039992.1| PREDICTED: U1 small nuclear ribonucleoprotei... 133 5e-29
ref|XP_012070589.1| PREDICTED: U1 small nuclear ribonucleoprotei... 133 5e-29
ref|XP_007010252.1| C2H2 and C2HC zinc fingers superfamily prote... 133 5e-29
ref|XP_002304170.1| proline-rich family protein [Populus trichoc... 132 7e-29
ref|XP_012490469.1| PREDICTED: U1 small nuclear ribonucleoprotei... 132 9e-29
ref|XP_010269034.1| PREDICTED: U1 small nuclear ribonucleoprotei... 131 2e-28
ref|XP_010265587.1| PREDICTED: U1 small nuclear ribonucleoprotei... 130 3e-28
ref|XP_010044039.1| PREDICTED: U1 small nuclear ribonucleoprotei... 129 1e-27
ref|XP_008451425.1| PREDICTED: U1 small nuclear ribonucleoprotei... 129 1e-27
gb|KCW86043.1| hypothetical protein EUGRSUZ_B02749 [Eucalyptus g... 129 1e-27
ref|XP_006444209.1| hypothetical protein CICLE_v10022350mg [Citr... 128 1e-27
>ref|XP_011082507.1| PREDICTED: U1 small nuclear ribonucleoprotein C [Sesamum indicum]
Length = 194
Score = 184 bits (466), Expect = 3e-44
Identities = 100/167 (59%), Positives = 111/167 (66%), Gaps = 7/167 (4%)
Frame = -3
Query: 484 SVRKQHNAGYKHKANVRTYYQQYEAQLNQSLIDQKVKEHLGAFRPPVAPYPQMRPGLPIL 305
SVRKQHNAGYKHKANVR+YYQQYEAQLNQSLIDQKVKEHLGAFRPPVAPY Q+RPGLP+L
Sbjct: 19 SVRKQHNAGYKHKANVRSYYQQYEAQLNQSLIDQKVKEHLGAFRPPVAPYNQLRPGLPVL 78
Query: 304 PTPMP---IPGAQF-PGFRPPVLPRPMSGAPGYM---TXXXXXXXXXXXXXXXXXANGLQ 146
PTP+P PGA PG RPPVLPRP+ GAPGY NGLQ
Sbjct: 79 PTPIPGQLPPGAPLVPGIRPPVLPRPIPGAPGYAPAPPGMPQMAPPPGAPGMPGQMNGLQ 138
Query: 145 XXXXXXXXXXXXXXXXPTSGGAPLMFTPQMYQGNAPVPTSGGGDGSN 5
P + GAP MF P +YQG+ +P+SGGGDG+N
Sbjct: 139 RPMTGPPPMVPGSAGTPNT-GAPPMFAPPVYQGSVSLPSSGGGDGTN 184
>ref|XP_009763219.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Nicotiana
sylvestris]
Length = 196
Score = 173 bits (438), Expect = 5e-41
Identities = 90/170 (52%), Positives = 102/170 (60%), Gaps = 9/170 (5%)
Frame = -3
Query: 484 SVRKQHNAGYKHKANVRTYYQQYEAQLNQSLIDQKVKEHLGAFRPPVAPYPQMRPGLPIL 305
SVRKQHNAGYKHK NVRTYYQQ+EAQLNQSLIDQKVKEHLGAFRP P+PQ+RPGLP+L
Sbjct: 19 SVRKQHNAGYKHKGNVRTYYQQFEAQLNQSLIDQKVKEHLGAFRPVGLPFPQLRPGLPVL 78
Query: 304 PTP---------MPIPGAQFPGFRPPVLPRPMSGAPGYMTXXXXXXXXXXXXXXXXXANG 152
PTP MP PG RPPVLPRPM G PGY N
Sbjct: 79 PTPQMPMGGNPQMPAGSQWVPGMRPPVLPRPMPGVPGYAPPPMPQMLAPPGAPMPGQFNN 138
Query: 151 LQXXXXXXXXXXXXXXXXPTSGGAPLMFTPQMYQGNAPVPTSGGGDGSNM 2
+Q ++GG P MF P +YQG+ VP +GGGD S++
Sbjct: 139 MQRPGAPPGAIPGSVGMPASTGGPP-MFAPPVYQGSIAVPANGGGDSSSI 187
>ref|XP_009604448.1| PREDICTED: U1 small nuclear ribonucleoprotein C
{ECO:0000255|HAMAP-Rule:MF_03153}-like [Nicotiana
tomentosiformis]
Length = 196
Score = 172 bits (437), Expect = 6e-41
Identities = 92/170 (54%), Positives = 105/170 (61%), Gaps = 9/170 (5%)
Frame = -3
Query: 484 SVRKQHNAGYKHKANVRTYYQQYEAQLNQSLIDQKVKEHLGAFRPPVAPYPQMRPGLPIL 305
SVRKQHNAGYKHK NVRTYYQQ+EAQLNQSLIDQKVKEHLGAFRP P+PQ+RPGLP+L
Sbjct: 19 SVRKQHNAGYKHKGNVRTYYQQFEAQLNQSLIDQKVKEHLGAFRPVGLPFPQLRPGLPVL 78
Query: 304 PTP-MP------IPGAQ--FPGFRPPVLPRPMSGAPGYMTXXXXXXXXXXXXXXXXXANG 152
PTP MP +PG PG RPPVLPRPM G PGY N
Sbjct: 79 PTPQMPMGGNPQMPGGSQWVPGMRPPVLPRPMPGVPGYAPPPMPQMLAPPGAPMPGQVNN 138
Query: 151 LQXXXXXXXXXXXXXXXXPTSGGAPLMFTPQMYQGNAPVPTSGGGDGSNM 2
+Q ++GG P MF P +YQG+ VP +GGGD S++
Sbjct: 139 MQRPGAPPGAIPGSVGMPASTGGPP-MFAPPVYQGSTTVPANGGGDSSSI 187
>ref|XP_006362977.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like isoform X1
[Solanum tuberosum] gi|565394667|ref|XP_006362978.1|
PREDICTED: U1 small nuclear ribonucleoprotein C-like
isoform X2 [Solanum tuberosum]
Length = 197
Score = 171 bits (432), Expect = 2e-40
Identities = 91/170 (53%), Positives = 105/170 (61%), Gaps = 9/170 (5%)
Frame = -3
Query: 484 SVRKQHNAGYKHKANVRTYYQQYEAQLNQSLIDQKVKEHLGAFRPPVAPYPQMRPGLPIL 305
SVRKQHNAGYKHK NVRTYYQQ+EAQLNQSLIDQKVKEHLGAFRP P+PQ+RPGLP L
Sbjct: 19 SVRKQHNAGYKHKGNVRTYYQQFEAQLNQSLIDQKVKEHLGAFRPVGLPFPQLRPGLPGL 78
Query: 304 PTP-MPIP-------GAQF-PGFRPPVLPRPMSGAPGYMTXXXXXXXXXXXXXXXXXANG 152
PTP M +P GAQ+ PG RPP+LPRPM G PGY N
Sbjct: 79 PTPQMQMPGNPQMPAGAQWVPGMRPPMLPRPMPGLPGYAPPPMPQMLAPPGAPMPGQVNN 138
Query: 151 LQXXXXXXXXXXXXXXXXPTSGGAPLMFTPQMYQGNAPVPTSGGGDGSNM 2
+Q +GG P+ P +YQG+ VPT+GGGD S++
Sbjct: 139 MQRPVGPPSAVPGSMGMPAPTGGPPMFAPPPVYQGSTTVPTNGGGDNSSI 188
>ref|NP_001234106.1| U1 small nuclear ribonucleoprotein C-like [Solanum lycopersicum]
gi|723703518|ref|XP_010321699.1| PREDICTED: U1 small
nuclear ribonucleoprotein C-like isoform X1 [Solanum
lycopersicum] gi|62751087|dbj|BAD95791.1| similar to u1
small nuclear ribonucleoprotein C [Solanum lycopersicum]
Length = 197
Score = 168 bits (425), Expect = 1e-39
Identities = 91/169 (53%), Positives = 103/169 (60%), Gaps = 9/169 (5%)
Frame = -3
Query: 484 SVRKQHNAGYKHKANVRTYYQQYEAQLNQSLIDQKVKEHLGAFRPPVAPYPQMRPGLPIL 305
SVRKQHNAGYKHK NVRTYYQQ+EAQLNQSLIDQKVKEHLGAFRP P+PQ+RPGLP L
Sbjct: 19 SVRKQHNAGYKHKGNVRTYYQQFEAQLNQSLIDQKVKEHLGAFRPVGLPFPQLRPGLPGL 78
Query: 304 PT-PMPIP-------GAQF-PGFRPPVLPRPMSGAPGYMTXXXXXXXXXXXXXXXXXANG 152
PT PM +P GAQ+ PG RPPVLPRPM G PGY N
Sbjct: 79 PTPPMQMPGNPQMPAGAQWVPGMRPPVLPRPMPGLPGYAPPPMPQMLAPPGAPMPGQVNN 138
Query: 151 LQXXXXXXXXXXXXXXXXPTSGGAPLMFTPQMYQGNAPVPTSGGGDGSN 5
+Q +GG P+ P +YQG+ VPT+GG D S+
Sbjct: 139 MQRPAGPPSAVPGSMGMPAPTGGPPMFAPPPVYQGSTTVPTTGGVDNSS 187
>emb|CDP03560.1| unnamed protein product [Coffea canephora]
Length = 269
Score = 156 bits (395), Expect = 4e-36
Identities = 93/187 (49%), Positives = 107/187 (57%), Gaps = 26/187 (13%)
Frame = -3
Query: 484 SVRKQHNAGYKHKANVRTYYQQYEAQLNQSLIDQKVKEHLGAFRPPVAPYPQMRPGLPIL 305
SVRKQHNAGYKHKANVR+YYQQYEAQLNQSLIDQKVKEHLGA+RP PYP +RPG+P+L
Sbjct: 79 SVRKQHNAGYKHKANVRSYYQQYEAQLNQSLIDQKVKEHLGAYRPVGPPYP-LRPGIPVL 137
Query: 304 PT-----------------PMPIPGAQ--------FPGFR-PPVLPRPMSGAPGYMTXXX 203
PT P+P+PG+ PG R PPVLPRP+ APGY
Sbjct: 138 PTPQMPMPMPMPMPMPMPLPVPVPGSASLPGSAPLIPGIRPPPVLPRPVPSAPGY---SM 194
Query: 202 XXXXXXXXXXXXXXANGLQXXXXXXXXXXXXXXXXPTSGGAPLMFTPQMYQGNAPVPTSG 23
NG+ P S GAP MFTP +YQGN VPT+G
Sbjct: 195 SQMVTPPTAPLPSQLNGIPRPLTAPPPVVPSSAGMPASSGAPPMFTP-VYQGNMAVPTTG 253
Query: 22 GGDGSNM 2
G+ S+M
Sbjct: 254 SGESSDM 260
>ref|XP_012833427.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Erythranthe
guttatus] gi|604341386|gb|EYU40704.1| hypothetical
protein MIMGU_mgv1a020156mg [Erythranthe guttata]
Length = 190
Score = 153 bits (387), Expect = 4e-35
Identities = 91/167 (54%), Positives = 97/167 (58%), Gaps = 6/167 (3%)
Frame = -3
Query: 484 SVRKQHNAGYKHKANVRTYYQQYEAQLNQSLIDQKVKEHLGAFRPP--VAPYP-QMRPGL 314
SVRKQHNAGYKHKANVRTYYQQYEAQLNQSLIDQKVKEHLGAFRPP VA P QMRPGL
Sbjct: 19 SVRKQHNAGYKHKANVRTYYQQYEAQLNQSLIDQKVKEHLGAFRPPPGVAYNPIQMRPGL 78
Query: 313 PILPTPMPIPGAQFP---GFRPPVLPRPMSGAPGYMTXXXXXXXXXXXXXXXXXANGLQX 143
PMP+PG Q+P FRPPVLPRP GY NGLQ
Sbjct: 79 ----MPMPLPG-QYPLGMQFRPPVLPRPPGAPGGYAPPQMPQMVLPPGAPMPGQMNGLQR 133
Query: 142 XXXXXXXXXXXXXXXPTSGGAPLMFTPQMYQGNAPVPTSGGGDGSNM 2
P+ P MYQGN +PTSGG D S++
Sbjct: 134 PGGLPPPPPMIPGMPSGGAPPPMFAPPPMYQGNVSLPTSGGSDSSSI 180
>ref|XP_012836623.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Erythranthe
guttatus] gi|604333797|gb|EYU38107.1| hypothetical
protein MIMGU_mgv1a014416mg [Erythranthe guttata]
Length = 190
Score = 153 bits (387), Expect = 4e-35
Identities = 91/167 (54%), Positives = 97/167 (58%), Gaps = 6/167 (3%)
Frame = -3
Query: 484 SVRKQHNAGYKHKANVRTYYQQYEAQLNQSLIDQKVKEHLGAFRPP--VAPYP-QMRPGL 314
SVRKQHNAGYKHKANVRTYYQQYEAQLNQSLIDQKVKEHLGAFRPP VA P QMRPGL
Sbjct: 19 SVRKQHNAGYKHKANVRTYYQQYEAQLNQSLIDQKVKEHLGAFRPPPGVAYNPIQMRPGL 78
Query: 313 PILPTPMPIPGAQFP---GFRPPVLPRPMSGAPGYMTXXXXXXXXXXXXXXXXXANGLQX 143
PMP+PG Q+P FRPPVLPRP GY NGLQ
Sbjct: 79 ----MPMPLPG-QYPLGMQFRPPVLPRPPGAPGGYAPPQMPQMVLPPGAPMPGQMNGLQR 133
Query: 142 XXXXXXXXXXXXXXXPTSGGAPLMFTPQMYQGNAPVPTSGGGDGSNM 2
P+ P MYQGN +PTSGG D S++
Sbjct: 134 PGGLPPPPPMIPGMPSGGAPPPMFAPPPMYQGNVSLPTSGGSDSSSI 180
>ref|XP_002270246.1| PREDICTED: U1 small nuclear ribonucleoprotein C [Vitis vinifera]
gi|363805533|sp|F6HQ26.1|RU1C_VITVI RecName: Full=U1
small nuclear ribonucleoprotein C; Short=U1 snRNP C;
Short=U1-C; Short=U1C
Length = 213
Score = 135 bits (340), Expect = 1e-29
Identities = 87/186 (46%), Positives = 98/186 (52%), Gaps = 25/186 (13%)
Frame = -3
Query: 484 SVRKQHNAGYKHKANVRTYYQQYEAQLNQSLIDQKVKEHLG---AFRPPVAPYPQ----- 329
SVRKQHNAGYKHKANVR+YYQQ+E Q QSLIDQ++KEHLG AF+ A Y Q
Sbjct: 19 SVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQTAAFQQVGAAYNQHLVSF 78
Query: 328 ----MRPGLPILPTP-MPIPGAQ--------FPGFRPPVLPRPMSGAPGYMTXXXXXXXX 188
RP LP+LPTP MP+ G+ PG RPPVLPRP+ GAPGYM
Sbjct: 79 PGNPPRPRLPVLPTPGMPVAGSAPLPMNSPLVPGMRPPVLPRPVPGAPGYMPAPGMPSMM 138
Query: 187 XXXXXXXXXANGL----QXXXXXXXXXXXXXXXXPTSGGAPLMFTPQMYQGNAPVPTSGG 20
L + PTSGGAP M T MYQ N PTSGG
Sbjct: 139 APPGAPSMPMPPLNSLPRPPTMNVPPAVPGSTSTPTSGGAPSMMTQPMYQANPAGPTSGG 198
Query: 19 GDGSNM 2
D N+
Sbjct: 199 FDSFNI 204
>ref|XP_011039992.1| PREDICTED: U1 small nuclear ribonucleoprotein C [Populus
euphratica]
Length = 202
Score = 133 bits (334), Expect = 5e-29
Identities = 85/175 (48%), Positives = 94/175 (53%), Gaps = 14/175 (8%)
Frame = -3
Query: 484 SVRKQHNAGYKHKANVRTYYQQYEAQLNQSLIDQKVKEHLG---AFRPPVAPYPQ----M 326
SVRKQHNAGYKHKANVR YYQQ+E Q QS+IDQ++KEHLG AF+ A Y Q
Sbjct: 19 SVRKQHNAGYKHKANVRIYYQQFEEQQTQSIIDQRIKEHLGQTAAFQQVGAAYNQHLMVQ 78
Query: 325 RPGLPILPTP-MPIPGAQ---FPGFRPPVLPRPMSGAPGYMT--XXXXXXXXXXXXXXXX 164
RP LP+LPTP MPI G FPG RPPVLPRPM GAPGYM
Sbjct: 79 RPRLPVLPTPVMPIGGNNAQLFPGMRPPVLPRPMPGAPGYMNPPMMPPMMAPPGAPSLPG 138
Query: 163 XANGL-QXXXXXXXXXXXXXXXXPTSGGAPLMFTPQMYQGNAPVPTSGGGDGSNM 2
NG+ + PT G P M P YQ N TSGG D N+
Sbjct: 139 QMNGVPRPPTMIAQPTVPGSTAAPTPSGPPSMVPPVTYQANQAATTSGGFDSFNV 193
>ref|XP_012070589.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Jatropha
curcas] gi|802585732|ref|XP_012070590.1| PREDICTED: U1
small nuclear ribonucleoprotein C-like [Jatropha curcas]
gi|643732248|gb|KDP39407.1| hypothetical protein
JCGZ_03689 [Jatropha curcas]
Length = 207
Score = 133 bits (334), Expect = 5e-29
Identities = 87/180 (48%), Positives = 95/180 (52%), Gaps = 20/180 (11%)
Frame = -3
Query: 484 SVRKQHNAGYKHKANVRTYYQQYEAQLNQSLIDQKVKEHLG---AFRPPVAPYPQ----M 326
SVRKQHNAGYKHKANVRTYYQQ+E Q QSLIDQ++KEHLG AF+ A Y Q
Sbjct: 19 SVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQTAAFQQVGAAYNQHLLAQ 78
Query: 325 RPGLPILPTP-MPIPG--------AQFPGFRPPVLPRPMSGAPGYM--TXXXXXXXXXXX 179
RP LP+LPTP MPI G A PG RPPVLPRP+ GAPGYM
Sbjct: 79 RPRLPVLPTPVMPIAGNGQLPMNTALLPGIRPPVLPRPVPGAPGYMPGQVMQPIMAPPGA 138
Query: 178 XXXXXXANGL--QXXXXXXXXXXXXXXXXPTSGGAPLMFTPQMYQGNAPVPTSGGGDGSN 5
ANG+ S G P + P YQ N VPTSGG D N
Sbjct: 139 PSIPGQANGMPRPPMMMPPTSVPGSTAVPAPSSGTPSIVPPPNYQPNPAVPTSGGFDSFN 198
>ref|XP_007010252.1| C2H2 and C2HC zinc fingers superfamily protein isoform 1 [Theobroma
cacao] gi|508727165|gb|EOY19062.1| C2H2 and C2HC zinc
fingers superfamily protein isoform 1 [Theobroma cacao]
Length = 208
Score = 133 bits (334), Expect = 5e-29
Identities = 84/180 (46%), Positives = 94/180 (52%), Gaps = 20/180 (11%)
Frame = -3
Query: 484 SVRKQHNAGYKHKANVRTYYQQYEAQLNQSLIDQKVKEHLG---AFRPPVAPYPQ----M 326
SVRKQHNAGYKHKANVRTYYQQ+E Q QSLIDQ++KEHLG AF+ A + Q
Sbjct: 19 SVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAFNQHLMAQ 78
Query: 325 RPGLPILPTP-MPIPGA--------QFPGFRPPVLPRPMSGAPGYM--TXXXXXXXXXXX 179
RP LP+LPTP MPIPGA PG RPPVLPRP+ G PGY+
Sbjct: 79 RPRLPVLPTPVMPIPGAAPLPMNQPMVPGIRPPVLPRPLPGPPGYVPAPGMPPMVAPPGA 138
Query: 178 XXXXXXANGL--QXXXXXXXXXXXXXXXXPTSGGAPLMFTPQMYQGNAPVPTSGGGDGSN 5
NG+ +S AP M TP YQ N PT GG D N
Sbjct: 139 PSLPGQINGVPRPPTLAPLTTVPGTATTPTSSNAAPTMVTPASYQTNPAAPTGGGFDNFN 198
>ref|XP_002304170.1| proline-rich family protein [Populus trichocarpa]
gi|222841602|gb|EEE79149.1| proline-rich family protein
[Populus trichocarpa]
Length = 202
Score = 132 bits (333), Expect = 7e-29
Identities = 85/175 (48%), Positives = 94/175 (53%), Gaps = 14/175 (8%)
Frame = -3
Query: 484 SVRKQHNAGYKHKANVRTYYQQYEAQLNQSLIDQKVKEHLG---AFRPPVAPYPQ----M 326
SVRKQHNAGYKHKANVR YYQQ+E Q QS+IDQ++KEHLG AF+ A Y Q
Sbjct: 19 SVRKQHNAGYKHKANVRIYYQQFEEQQTQSIIDQRIKEHLGQTAAFQQVGAAYNQHLMVQ 78
Query: 325 RPGLPILPTP-MPIPGAQ---FPGFRPPVLPRPMSGAPGYMT--XXXXXXXXXXXXXXXX 164
RP LP+LPTP MPI G FPG RPPVLPRPM GAPGYM
Sbjct: 79 RPRLPVLPTPVMPIGGNNAPLFPGMRPPVLPRPMPGAPGYMNPPMMPPMMAPPGAPSLPG 138
Query: 163 XANGL-QXXXXXXXXXXXXXXXXPTSGGAPLMFTPQMYQGNAPVPTSGGGDGSNM 2
NG+ + PT G P M P YQ N TSGG D N+
Sbjct: 139 QMNGIPRPPTMIAQPNVPGSTAAPTPSGPPSMGPPVTYQANQAATTSGGFDSFNV 193
>ref|XP_012490469.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like isoform X1
[Gossypium raimondii] gi|823188311|ref|XP_012490470.1|
PREDICTED: U1 small nuclear ribonucleoprotein C-like
isoform X1 [Gossypium raimondii]
gi|823188316|ref|XP_012490471.1| PREDICTED: U1 small
nuclear ribonucleoprotein C-like isoform X1 [Gossypium
raimondii] gi|823188319|ref|XP_012490472.1| PREDICTED:
U1 small nuclear ribonucleoprotein C-like isoform X1
[Gossypium raimondii] gi|823188322|ref|XP_012490473.1|
PREDICTED: U1 small nuclear ribonucleoprotein C-like
isoform X1 [Gossypium raimondii]
gi|763774816|gb|KJB41939.1| hypothetical protein
B456_007G132200 [Gossypium raimondii]
gi|763774817|gb|KJB41940.1| hypothetical protein
B456_007G132200 [Gossypium raimondii]
gi|763774818|gb|KJB41941.1| hypothetical protein
B456_007G132200 [Gossypium raimondii]
gi|763774819|gb|KJB41942.1| hypothetical protein
B456_007G132200 [Gossypium raimondii]
gi|763774821|gb|KJB41944.1| hypothetical protein
B456_007G132200 [Gossypium raimondii]
Length = 208
Score = 132 bits (332), Expect = 9e-29
Identities = 86/180 (47%), Positives = 95/180 (52%), Gaps = 20/180 (11%)
Frame = -3
Query: 484 SVRKQHNAGYKHKANVRTYYQQYEAQLNQSLIDQKVKEHLG---AFRPPVAPYPQ----M 326
SVRKQHNAGYKHKANVRTYYQQ+E Q QSLIDQ++KEHLG AF A + Q
Sbjct: 19 SVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFHQVGAAFNQHLMAQ 78
Query: 325 RPGLPILPTP-MPIP-GA-------QFPGFRPPVLPRPMSGAPGY--MTXXXXXXXXXXX 179
RP LP+LPTP MPIP GA PG RPPVLPRP+ GAPGY +
Sbjct: 79 RPRLPVLPTPVMPIPRGAPLPINQPMVPGIRPPVLPRPVPGAPGYVPVPGMPPTVAPPGA 138
Query: 178 XXXXXXANGL--QXXXXXXXXXXXXXXXXPTSGGAPLMFTPQMYQGNAPVPTSGGGDGSN 5
NGL +S AP M TP +YQ N P SGG D N
Sbjct: 139 PSFPGQINGLPQPPTLAPPSTVTVTATTPTSSNAAPTMATPALYQSNPAAPASGGFDNFN 198
>ref|XP_010269034.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Nelumbo
nucifera]
Length = 241
Score = 131 bits (329), Expect = 2e-28
Identities = 85/184 (46%), Positives = 96/184 (52%), Gaps = 24/184 (13%)
Frame = -3
Query: 484 SVRKQHNAGYKHKANVRTYYQQYEAQLNQSLIDQKVKEHLG---AFRPPVAPYPQ----- 329
SVRKQHNAGYKHKANVR+YYQQ+E Q QSLIDQ++KEHLG AF+ A Y Q
Sbjct: 19 SVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQTAAFQQVGAAYNQHLTSF 78
Query: 328 ----MRPGLPILPTPM------PIPGAQ--FPGFRPPVLPRPMSGAPGY-MTXXXXXXXX 188
RP LPILPTP+ +PG PG RPPVLPRP++G PGY +
Sbjct: 79 PANPQRPRLPILPTPVLPTGAPQVPGTSLLIPGIRPPVLPRPVAGPPGYAVAPSMPSVLG 138
Query: 187 XXXXXXXXXANGL---QXXXXXXXXXXXXXXXXPTSGGAPLMFTPQMYQGNAPVPTSGGG 17
NGL PTS GAP M TP +YQ N TSGG
Sbjct: 139 PSGTPLPMPVNGLPRPPTINAPTTVPGGTAAPAPTSNGAPSMVTPAIYQANPTTATSGGF 198
Query: 16 DGSN 5
D N
Sbjct: 199 DSFN 202
>ref|XP_010265587.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like isoform X2
[Nelumbo nucifera] gi|720030675|ref|XP_010265588.1|
PREDICTED: U1 small nuclear ribonucleoprotein C-like
isoform X2 [Nelumbo nucifera]
Length = 237
Score = 130 bits (328), Expect = 3e-28
Identities = 85/182 (46%), Positives = 96/182 (52%), Gaps = 22/182 (12%)
Frame = -3
Query: 484 SVRKQHNAGYKHKANVRTYYQQYEAQLNQSLIDQKVKEHLG---AFRPPVAPYPQ----- 329
SVR QH+AGYKHKANVR+YYQQ+E Q QSLIDQ++KEHLG AF+ A Y Q
Sbjct: 19 SVRNQHSAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQTAAFQQVGAAYNQHLASF 78
Query: 328 ----MRPGLPILPTPM------PIPGAQ--FPGFRPPVLPRPMSGAPGY-MTXXXXXXXX 188
RP LPILPTP+ +PG PG RPPVLPRP++GAPGY
Sbjct: 79 QANPQRPRLPILPTPILPTGAPQVPGTSSLVPGIRPPVLPRPVAGAPGYAAAPSMPSVFG 138
Query: 187 XXXXXXXXXANGL-QXXXXXXXXXXXXXXXXPTSGGAPLMFTPQMYQGNAPVPTSGGGDG 11
NGL + PTS GAP M TP MYQ N TSGG D
Sbjct: 139 PSGTPLPMQVNGLPRPPTINSPTTVPGGTAAPTSNGAPSMVTPVMYQANPTTATSGGFDS 198
Query: 10 SN 5
N
Sbjct: 199 FN 200
>ref|XP_010044039.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Eucalyptus
grandis]
Length = 201
Score = 129 bits (323), Expect = 1e-27
Identities = 83/173 (47%), Positives = 90/173 (52%), Gaps = 13/173 (7%)
Frame = -3
Query: 484 SVRKQHNAGYKHKANVRTYYQQYEAQLNQSLIDQKVKEHLG---AFRPPVAPYPQ----M 326
SVRKQHNAGYKHKANVR YYQQ+E Q QSLIDQ++KEHLG AF+ A Y Q
Sbjct: 19 SVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLMAQ 78
Query: 325 RPGLPILPTPMPIPGAQF---PGFRPPVLPRPMSGAPGYM-TXXXXXXXXXXXXXXXXXA 158
RP LPILPTPM G PG RPPVLPRP GAPGY+
Sbjct: 79 RPRLPILPTPMMPMGPNMQLAPGMRPPVLPRPPPGAPGYIPPPGMPAMAPAPGAPSMPQM 138
Query: 157 NGL--QXXXXXXXXXXXXXXXXPTSGGAPLMFTPQMYQGNAPVPTSGGGDGSN 5
NG+ +SG AP M P YQ N PTSGG D N
Sbjct: 139 NGMPRPPTLNVPPSGPGSALNLTSSGSAPSMVPPPAYQMNPAGPTSGGFDNFN 191
>ref|XP_008451425.1| PREDICTED: U1 small nuclear ribonucleoprotein C [Cucumis melo]
Length = 197
Score = 129 bits (323), Expect = 1e-27
Identities = 78/167 (46%), Positives = 91/167 (54%), Gaps = 10/167 (5%)
Frame = -3
Query: 484 SVRKQHNAGYKHKANVRTYYQQYEAQLNQSLIDQKVKEHLG---AFRPPVAPYPQ----M 326
SVRKQHNAGYKHKANVR+YYQQ+E Q QSLIDQ++KEHLG AF+ A + Q
Sbjct: 19 SVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAFNQHLLGQ 78
Query: 325 RPGLPILPTPMPIPGAQ---FPGFRPPVLPRPMSGAPGYMTXXXXXXXXXXXXXXXXXAN 155
RP LP+LPTP+ IPGA PG RPPVLPRP+ GAPGY+
Sbjct: 79 RPRLPVLPTPV-IPGAAPGLMPGIRPPVLPRPIPGAPGYLPTPTMPPMMAPPGAPIPGQV 137
Query: 154 GLQXXXXXXXXXXXXXXXXPTSGGAPLMFTPQMYQGNAPVPTSGGGD 14
+ ++ GAPL P YQ N P SGG D
Sbjct: 138 NIPSRPPPPAPIPGSAPQPSSTNGAPLA-APSTYQANPAAPGSGGYD 183
>gb|KCW86043.1| hypothetical protein EUGRSUZ_B02749 [Eucalyptus grandis]
Length = 242
Score = 129 bits (323), Expect = 1e-27
Identities = 83/173 (47%), Positives = 90/173 (52%), Gaps = 13/173 (7%)
Frame = -3
Query: 484 SVRKQHNAGYKHKANVRTYYQQYEAQLNQSLIDQKVKEHLG---AFRPPVAPYPQ----M 326
SVRKQHNAGYKHKANVR YYQQ+E Q QSLIDQ++KEHLG AF+ A Y Q
Sbjct: 60 SVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLMAQ 119
Query: 325 RPGLPILPTPMPIPGAQF---PGFRPPVLPRPMSGAPGYM-TXXXXXXXXXXXXXXXXXA 158
RP LPILPTPM G PG RPPVLPRP GAPGY+
Sbjct: 120 RPRLPILPTPMMPMGPNMQLAPGMRPPVLPRPPPGAPGYIPPPGMPAMAPAPGAPSMPQM 179
Query: 157 NGL--QXXXXXXXXXXXXXXXXPTSGGAPLMFTPQMYQGNAPVPTSGGGDGSN 5
NG+ +SG AP M P YQ N PTSGG D N
Sbjct: 180 NGMPRPPTLNVPPSGPGSALNLTSSGSAPSMVPPPAYQMNPAGPTSGGFDNFN 232
>ref|XP_006444209.1| hypothetical protein CICLE_v10022350mg [Citrus clementina]
gi|568852371|ref|XP_006479851.1| PREDICTED: U1 small
nuclear ribonucleoprotein C-like [Citrus sinensis]
gi|557546471|gb|ESR57449.1| hypothetical protein
CICLE_v10022350mg [Citrus clementina]
gi|641868734|gb|KDO87418.1| hypothetical protein
CISIN_1g029190mg [Citrus sinensis]
gi|641868735|gb|KDO87419.1| hypothetical protein
CISIN_1g029190mg [Citrus sinensis]
Length = 197
Score = 128 bits (322), Expect = 1e-27
Identities = 81/168 (48%), Positives = 92/168 (54%), Gaps = 14/168 (8%)
Frame = -3
Query: 484 SVRKQHNAGYKHKANVRTYYQQYEAQLNQSLIDQKVKEHLG---AFRPPVAPYPQ----M 326
SVRKQHNAGYKHKANVR+YYQQ+E Q QSLIDQ++KEHLG AF+ A Y Q
Sbjct: 19 SVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQTAAFQQVGAAYNQHLLAQ 78
Query: 325 RPGLPILPTP-MPIPGAQ--FPGFRPPVLPRPMSGAPGYMT--XXXXXXXXXXXXXXXXX 161
RP LP+LPTP MP+ G+ PG RPPVLPRP PGY++
Sbjct: 79 RPRLPVLPTPVMPMTGSAPLVPGMRPPVLPRPGPSPPGYVSAPGMPPMMAPPGAPSAPGQ 138
Query: 160 ANGL--QXXXXXXXXXXXXXXXXPTSGGAPLMFTPQMYQGNAPVPTSG 23
NG +S GAP M TPQ YQ N VPTSG
Sbjct: 139 LNGFPRPPAVMNPTAVSGSAAPPASSSGAPSMATPQTYQANPTVPTSG 186