BLASTX nr result
ID: Forsythia23_contig00007504
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia23_contig00007504
(336 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011090278.1| PREDICTED: DNA-directed RNA polymerase II su... 100 4e-19
ref|XP_011088997.1| PREDICTED: DNA-directed RNA polymerase II su... 100 4e-19
gb|KDO59899.1| hypothetical protein CISIN_1g0325681mg, partial [... 100 4e-19
gb|KDO37892.1| hypothetical protein CISIN_1g0424881mg, partial [... 100 4e-19
ref|XP_006428010.1| hypothetical protein CICLE_v10026735mg [Citr... 100 4e-19
ref|XP_006428009.1| hypothetical protein CICLE_v10026735mg [Citr... 100 4e-19
gb|KJB71267.1| hypothetical protein B456_011G113800 [Gossypium r... 100 6e-19
ref|XP_012487157.1| PREDICTED: DNA-directed RNA polymerase II su... 100 6e-19
gb|KHG11711.1| DNA-directed RNA polymerase II subunit RPB4 [Goss... 100 6e-19
ref|XP_007048135.1| RNA polymerase II, Rpb4, core protein isofor... 100 6e-19
ref|XP_012089384.1| PREDICTED: DNA-directed RNA polymerase II su... 99 8e-19
gb|KDP23744.1| hypothetical protein JCGZ_23577 [Jatropha curcas] 99 8e-19
ref|XP_002307132.1| hypothetical protein POPTR_0005s08690g [Popu... 99 8e-19
ref|XP_012838496.1| PREDICTED: DNA-directed RNA polymerase II su... 99 8e-19
ref|XP_002282413.1| PREDICTED: DNA-directed RNA polymerase II su... 99 8e-19
ref|XP_007134240.1| hypothetical protein PHAVU_010G030200g [Phas... 97 3e-18
ref|XP_004509486.1| PREDICTED: DNA-directed RNA polymerase II su... 97 3e-18
gb|AFK35928.1| unknown [Lotus japonicus] 97 3e-18
ref|XP_003626908.1| DNA-directed RNA polymerase II subunit RPB4 ... 97 3e-18
ref|XP_003626907.1| DNA-directed RNA polymerase II subunit RPB4 ... 97 3e-18
>ref|XP_011090278.1| PREDICTED: DNA-directed RNA polymerase II subunit 4-like [Sesamum
indicum]
Length = 138
Score = 100 bits (249), Expect = 4e-19
Identities = 49/52 (94%), Positives = 51/52 (98%)
Frame = -3
Query: 334 AEFELSVLGNLCPETVEEALAMVPSIKTRGRAHDDDAIEKMLNDLSLIKKFE 179
AEFEL VLGNLCPETVEEA+AMVPSIKTRGRAHDD+AIEKMLNDLSLIKKFE
Sbjct: 87 AEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHDDEAIEKMLNDLSLIKKFE 138
>ref|XP_011088997.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Sesamum
indicum] gi|747083277|ref|XP_011088998.1| PREDICTED:
DNA-directed RNA polymerase II subunit 4 [Sesamum
indicum]
Length = 138
Score = 100 bits (249), Expect = 4e-19
Identities = 49/52 (94%), Positives = 51/52 (98%)
Frame = -3
Query: 334 AEFELSVLGNLCPETVEEALAMVPSIKTRGRAHDDDAIEKMLNDLSLIKKFE 179
AEFEL VLGNLCPETVEEA+AMVPSIKTRGRAHDD+AIEKMLNDLSLIKKFE
Sbjct: 87 AEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHDDEAIEKMLNDLSLIKKFE 138
>gb|KDO59899.1| hypothetical protein CISIN_1g0325681mg, partial [Citrus sinensis]
Length = 59
Score = 100 bits (249), Expect = 4e-19
Identities = 49/52 (94%), Positives = 51/52 (98%)
Frame = -3
Query: 334 AEFELSVLGNLCPETVEEALAMVPSIKTRGRAHDDDAIEKMLNDLSLIKKFE 179
AEFEL VLGNLCPETVEEA+AMVPSIKTRGRAHDD+AIEKMLNDLSLIKKFE
Sbjct: 8 AEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHDDEAIEKMLNDLSLIKKFE 59
>gb|KDO37892.1| hypothetical protein CISIN_1g0424881mg, partial [Citrus sinensis]
Length = 61
Score = 100 bits (249), Expect = 4e-19
Identities = 49/52 (94%), Positives = 51/52 (98%)
Frame = -3
Query: 334 AEFELSVLGNLCPETVEEALAMVPSIKTRGRAHDDDAIEKMLNDLSLIKKFE 179
AEFEL VLGNLCPETVEEA+AMVPSIKTRGRAHDD+AIEKMLNDLSLIKKFE
Sbjct: 10 AEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHDDEAIEKMLNDLSLIKKFE 61
>ref|XP_006428010.1| hypothetical protein CICLE_v10026735mg [Citrus clementina]
gi|568884040|ref|XP_006494738.1| PREDICTED: DNA-directed
RNA polymerase II subunit 4-like isoform X2 [Citrus
sinensis] gi|557530000|gb|ESR41250.1| hypothetical
protein CICLE_v10026735mg [Citrus clementina]
Length = 138
Score = 100 bits (249), Expect = 4e-19
Identities = 49/52 (94%), Positives = 51/52 (98%)
Frame = -3
Query: 334 AEFELSVLGNLCPETVEEALAMVPSIKTRGRAHDDDAIEKMLNDLSLIKKFE 179
AEFEL VLGNLCPETVEEA+AMVPSIKTRGRAHDD+AIEKMLNDLSLIKKFE
Sbjct: 87 AEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHDDEAIEKMLNDLSLIKKFE 138
>ref|XP_006428009.1| hypothetical protein CICLE_v10026735mg [Citrus clementina]
gi|557529999|gb|ESR41249.1| hypothetical protein
CICLE_v10026735mg [Citrus clementina]
Length = 114
Score = 100 bits (249), Expect = 4e-19
Identities = 49/52 (94%), Positives = 51/52 (98%)
Frame = -3
Query: 334 AEFELSVLGNLCPETVEEALAMVPSIKTRGRAHDDDAIEKMLNDLSLIKKFE 179
AEFEL VLGNLCPETVEEA+AMVPSIKTRGRAHDD+AIEKMLNDLSLIKKFE
Sbjct: 63 AEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHDDEAIEKMLNDLSLIKKFE 114
>gb|KJB71267.1| hypothetical protein B456_011G113800 [Gossypium raimondii]
Length = 134
Score = 99.8 bits (247), Expect = 6e-19
Identities = 48/52 (92%), Positives = 51/52 (98%)
Frame = -3
Query: 334 AEFELSVLGNLCPETVEEALAMVPSIKTRGRAHDDDAIEKMLNDLSLIKKFE 179
AEFEL VLGNLCPETVEEA+AMVPSIKT+GRAHDDDAIE+MLNDLSLIKKFE
Sbjct: 83 AEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHDDDAIERMLNDLSLIKKFE 134
>ref|XP_012487157.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Gossypium
raimondii] gi|823248799|ref|XP_012457051.1| PREDICTED:
DNA-directed RNA polymerase II subunit 4 [Gossypium
raimondii] gi|763770918|gb|KJB38133.1| hypothetical
protein B456_006G238100 [Gossypium raimondii]
gi|763804330|gb|KJB71268.1| hypothetical protein
B456_011G113800 [Gossypium raimondii]
gi|763804331|gb|KJB71269.1| hypothetical protein
B456_011G113800 [Gossypium raimondii]
Length = 138
Score = 99.8 bits (247), Expect = 6e-19
Identities = 48/52 (92%), Positives = 51/52 (98%)
Frame = -3
Query: 334 AEFELSVLGNLCPETVEEALAMVPSIKTRGRAHDDDAIEKMLNDLSLIKKFE 179
AEFEL VLGNLCPETVEEA+AMVPSIKT+GRAHDDDAIE+MLNDLSLIKKFE
Sbjct: 87 AEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHDDDAIERMLNDLSLIKKFE 138
>gb|KHG11711.1| DNA-directed RNA polymerase II subunit RPB4 [Gossypium arboreum]
Length = 135
Score = 99.8 bits (247), Expect = 6e-19
Identities = 48/52 (92%), Positives = 51/52 (98%)
Frame = -3
Query: 334 AEFELSVLGNLCPETVEEALAMVPSIKTRGRAHDDDAIEKMLNDLSLIKKFE 179
AEFEL VLGNLCPETVEEA+AMVPSIKT+GRAHDDDAIE+MLNDLSLIKKFE
Sbjct: 84 AEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHDDDAIERMLNDLSLIKKFE 135
>ref|XP_007048135.1| RNA polymerase II, Rpb4, core protein isoform 1 [Theobroma cacao]
gi|590707933|ref|XP_007048136.1| RNA polymerase II,
Rpb4, core protein isoform 1 [Theobroma cacao]
gi|508700396|gb|EOX92292.1| RNA polymerase II, Rpb4,
core protein isoform 1 [Theobroma cacao]
gi|508700397|gb|EOX92293.1| RNA polymerase II, Rpb4,
core protein isoform 1 [Theobroma cacao]
Length = 138
Score = 99.8 bits (247), Expect = 6e-19
Identities = 48/52 (92%), Positives = 51/52 (98%)
Frame = -3
Query: 334 AEFELSVLGNLCPETVEEALAMVPSIKTRGRAHDDDAIEKMLNDLSLIKKFE 179
AEFEL VLGNLCPETVEEA+AMVPSIKT+GRAHDDDAIE+MLNDLSLIKKFE
Sbjct: 87 AEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHDDDAIERMLNDLSLIKKFE 138
>ref|XP_012089384.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Jatropha
curcas]
Length = 138
Score = 99.4 bits (246), Expect = 8e-19
Identities = 48/52 (92%), Positives = 51/52 (98%)
Frame = -3
Query: 334 AEFELSVLGNLCPETVEEALAMVPSIKTRGRAHDDDAIEKMLNDLSLIKKFE 179
AEFEL VLGNLCPETVEEA+AMVPSIKT+GRAHDD+AIEKMLNDLSLIKKFE
Sbjct: 87 AEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHDDEAIEKMLNDLSLIKKFE 138
>gb|KDP23744.1| hypothetical protein JCGZ_23577 [Jatropha curcas]
Length = 164
Score = 99.4 bits (246), Expect = 8e-19
Identities = 48/52 (92%), Positives = 51/52 (98%)
Frame = -3
Query: 334 AEFELSVLGNLCPETVEEALAMVPSIKTRGRAHDDDAIEKMLNDLSLIKKFE 179
AEFEL VLGNLCPETVEEA+AMVPSIKT+GRAHDD+AIEKMLNDLSLIKKFE
Sbjct: 113 AEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHDDEAIEKMLNDLSLIKKFE 164
>ref|XP_002307132.1| hypothetical protein POPTR_0005s08690g [Populus trichocarpa]
gi|224096326|ref|XP_002310604.1| hypothetical protein
POPTR_0007s06660g [Populus trichocarpa]
gi|743823365|ref|XP_011021942.1| PREDICTED: DNA-directed
RNA polymerase II subunit 4 [Populus euphratica]
gi|743823373|ref|XP_011021944.1| PREDICTED: DNA-directed
RNA polymerase II subunit 4 [Populus euphratica]
gi|743837931|ref|XP_011025594.1| PREDICTED: DNA-directed
RNA polymerase II subunit 4 [Populus euphratica]
gi|222853507|gb|EEE91054.1| hypothetical protein
POPTR_0007s06660g [Populus trichocarpa]
gi|222856581|gb|EEE94128.1| hypothetical protein
POPTR_0005s08690g [Populus trichocarpa]
Length = 138
Score = 99.4 bits (246), Expect = 8e-19
Identities = 48/52 (92%), Positives = 51/52 (98%)
Frame = -3
Query: 334 AEFELSVLGNLCPETVEEALAMVPSIKTRGRAHDDDAIEKMLNDLSLIKKFE 179
AEFEL VLGNLCPETVEEA+AMVPSIKT+GRAHDD+AIEKMLNDLSLIKKFE
Sbjct: 87 AEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHDDEAIEKMLNDLSLIKKFE 138
>ref|XP_012838496.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Erythranthe
guttatus] gi|604331155|gb|EYU36013.1| hypothetical
protein MIMGU_mgv1a015994mg [Erythranthe guttata]
Length = 138
Score = 99.4 bits (246), Expect = 8e-19
Identities = 48/52 (92%), Positives = 51/52 (98%)
Frame = -3
Query: 334 AEFELSVLGNLCPETVEEALAMVPSIKTRGRAHDDDAIEKMLNDLSLIKKFE 179
AEFEL VLGNLCPETVEEA+AMVPSIKTRGRAHDD+AIE+MLNDLSLIKKFE
Sbjct: 87 AEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHDDEAIERMLNDLSLIKKFE 138
>ref|XP_002282413.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Vitis
vinifera] gi|731409111|ref|XP_010657077.1| PREDICTED:
DNA-directed RNA polymerase II subunit 4 [Vitis
vinifera] gi|147856183|emb|CAN80281.1| hypothetical
protein VITISV_017448 [Vitis vinifera]
gi|302143481|emb|CBI22042.3| unnamed protein product
[Vitis vinifera]
Length = 138
Score = 99.4 bits (246), Expect = 8e-19
Identities = 48/52 (92%), Positives = 51/52 (98%)
Frame = -3
Query: 334 AEFELSVLGNLCPETVEEALAMVPSIKTRGRAHDDDAIEKMLNDLSLIKKFE 179
AEFEL VLGNLCPETVEEA+AMVPSIKT+GRAHDD+AIEKMLNDLSLIKKFE
Sbjct: 87 AEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHDDEAIEKMLNDLSLIKKFE 138
>ref|XP_007134240.1| hypothetical protein PHAVU_010G030200g [Phaseolus vulgaris]
gi|561007285|gb|ESW06234.1| hypothetical protein
PHAVU_010G030200g [Phaseolus vulgaris]
Length = 138
Score = 97.4 bits (241), Expect = 3e-18
Identities = 48/52 (92%), Positives = 50/52 (96%)
Frame = -3
Query: 334 AEFELSVLGNLCPETVEEALAMVPSIKTRGRAHDDDAIEKMLNDLSLIKKFE 179
AEFEL VLGNLCPETVEEA+AMVPSIKTRGRA DD+AIEKMLNDLSLIKKFE
Sbjct: 87 AEFELCVLGNLCPETVEEAIAMVPSIKTRGRAQDDEAIEKMLNDLSLIKKFE 138
>ref|XP_004509486.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Cicer
arietinum] gi|502155876|ref|XP_004510223.1| PREDICTED:
DNA-directed RNA polymerase II subunit 4 [Cicer
arietinum]
Length = 138
Score = 97.4 bits (241), Expect = 3e-18
Identities = 48/52 (92%), Positives = 50/52 (96%)
Frame = -3
Query: 334 AEFELSVLGNLCPETVEEALAMVPSIKTRGRAHDDDAIEKMLNDLSLIKKFE 179
AEFEL VLGNLCPETVEEA+AMVPSIKTRGRA DD+AIEKMLNDLSLIKKFE
Sbjct: 87 AEFELCVLGNLCPETVEEAIAMVPSIKTRGRAQDDEAIEKMLNDLSLIKKFE 138
>gb|AFK35928.1| unknown [Lotus japonicus]
Length = 138
Score = 97.4 bits (241), Expect = 3e-18
Identities = 48/52 (92%), Positives = 50/52 (96%)
Frame = -3
Query: 334 AEFELSVLGNLCPETVEEALAMVPSIKTRGRAHDDDAIEKMLNDLSLIKKFE 179
AEFEL VLGNLCPETVEEA+AMVPSIKTRGRA DD+AIEKMLNDLSLIKKFE
Sbjct: 87 AEFELCVLGNLCPETVEEAIAMVPSIKTRGRAQDDEAIEKMLNDLSLIKKFE 138
>ref|XP_003626908.1| DNA-directed RNA polymerase II subunit RPB4 [Medicago truncatula]
Length = 114
Score = 97.4 bits (241), Expect = 3e-18
Identities = 48/52 (92%), Positives = 50/52 (96%)
Frame = -3
Query: 334 AEFELSVLGNLCPETVEEALAMVPSIKTRGRAHDDDAIEKMLNDLSLIKKFE 179
AEFEL VLGNLCPETVEEA+AMVPSIKTRGRA DD+AIEKMLNDLSLIKKFE
Sbjct: 63 AEFELCVLGNLCPETVEEAIAMVPSIKTRGRAQDDEAIEKMLNDLSLIKKFE 114
>ref|XP_003626907.1| DNA-directed RNA polymerase II subunit RPB4 [Medicago truncatula]
gi|355520929|gb|AET01383.1| RNA polymerase II, Rpb4,
core protein [Medicago truncatula]
gi|388497296|gb|AFK36714.1| unknown [Medicago
truncatula]
Length = 138
Score = 97.4 bits (241), Expect = 3e-18
Identities = 48/52 (92%), Positives = 50/52 (96%)
Frame = -3
Query: 334 AEFELSVLGNLCPETVEEALAMVPSIKTRGRAHDDDAIEKMLNDLSLIKKFE 179
AEFEL VLGNLCPETVEEA+AMVPSIKTRGRA DD+AIEKMLNDLSLIKKFE
Sbjct: 87 AEFELCVLGNLCPETVEEAIAMVPSIKTRGRAQDDEAIEKMLNDLSLIKKFE 138