BLASTX nr result
ID: Forsythia23_contig00006009
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia23_contig00006009
(652 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011071167.1| PREDICTED: cleavage and polyadenylation spec... 254 4e-65
ref|XP_012845456.1| PREDICTED: cleavage and polyadenylation spec... 222 2e-55
emb|CDP13267.1| unnamed protein product [Coffea canephora] 211 3e-52
ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation spec... 206 7e-51
ref|XP_009619090.1| PREDICTED: cleavage and polyadenylation spec... 203 6e-50
ref|XP_009780918.1| PREDICTED: cleavage and polyadenylation spec... 198 2e-48
ref|XP_010320954.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and... 181 4e-43
ref|XP_010650880.1| PREDICTED: cleavage and polyadenylation spec... 179 9e-43
ref|XP_002282072.3| PREDICTED: cleavage and polyadenylation spec... 179 9e-43
ref|XP_008221952.1| PREDICTED: cleavage and polyadenylation spec... 177 4e-42
ref|XP_007044909.1| RNA-binding family protein isoform 6 [Theobr... 177 6e-42
ref|XP_007044908.1| RNA-binding family protein isoform 5, partia... 177 6e-42
ref|XP_007044907.1| RNA-binding family protein isoform 4 [Theobr... 177 6e-42
ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobr... 177 6e-42
ref|XP_008389755.1| PREDICTED: RNA-binding protein FUS-like [Mal... 176 1e-41
ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation spec... 173 8e-41
ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citr... 172 1e-40
ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation spec... 172 1e-40
ref|XP_010251347.1| PREDICTED: RNA-binding motif protein, X chro... 171 3e-40
ref|XP_012085540.1| PREDICTED: cleavage and polyadenylation spec... 170 5e-40
>ref|XP_011071167.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6 [Sesamum indicum]
Length = 643
Score = 254 bits (648), Expect = 4e-65
Identities = 129/204 (63%), Positives = 150/204 (73%)
Frame = -1
Query: 613 DPMADEQLDFGDEEFGGSQRMQYHQGGAIPALAEEEMLGEDDEYDDLYNDVNVGESFLQL 434
DP+ EQLD+GDEE+ GSQ+MQYHQGGAIPALAEEEM+GE+DEYDDLYNDVNVGE FLQ+
Sbjct: 2 DPVTGEQLDYGDEEYAGSQKMQYHQGGAIPALAEEEMIGEEDEYDDLYNDVNVGEGFLQM 61
Query: 433 QRSEVQMPSDGANKGGLQAPNPNAPETRAEAIGSQEVRVSGVENGGSYTPLGVQFHVQKS 254
QRSE QMPS G GG Q N P RAEAI QEV + V + G+Y P GVQF QK+
Sbjct: 62 QRSEAQMPS-GVGNGGFQGSKSNVPGIRAEAIAPQEVTNARVTSEGNYLPTGVQFPEQKT 120
Query: 253 VLPADREPEQNFDASQRGKLPDMAHNSQAGNLGFQGSMSMPQKNAPGPINISGKIVGDST 74
PA P Q DASQRG+LP+M HNSQ G+LG+QGS+SMPQK A +N KIVG+
Sbjct: 121 AFPAAGGPAQTVDASQRGRLPEMVHNSQPGHLGYQGSVSMPQKTAADRMNKPEKIVGEPA 180
Query: 73 PLTNPNVGSSRGVPQIIPPNTVNS 2
P NPN+GSS+G PQ IP +NS
Sbjct: 181 PSPNPNMGSSKGGPQ-IPTTMMNS 203
>ref|XP_012845456.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6 [Erythranthe guttatus] gi|604319404|gb|EYU30596.1|
hypothetical protein MIMGU_mgv1a002773mg [Erythranthe
guttata]
Length = 639
Score = 222 bits (565), Expect = 2e-55
Identities = 120/204 (58%), Positives = 143/204 (70%)
Frame = -1
Query: 613 DPMADEQLDFGDEEFGGSQRMQYHQGGAIPALAEEEMLGEDDEYDDLYNDVNVGESFLQL 434
DP+ DEQLD+GDEE+GG+Q+MQYH GGAIPALAE+EM+G+DDEYDDLYNDVNVGE F+Q+
Sbjct: 2 DPVTDEQLDYGDEEYGGNQKMQYHHGGAIPALAEDEMIGDDDEYDDLYNDVNVGEGFMQM 61
Query: 433 QRSEVQMPSDGANKGGLQAPNPNAPETRAEAIGSQEVRVSGVENGGSYTPLGVQFHVQKS 254
QRSE PS N + N AP TRAEAI SQEV V N GSY P GVQ QK+
Sbjct: 62 QRSEAPPPSAVGNNSFSISKN-TAPGTRAEAIASQEVNNGRVGNEGSYAPNGVQLSDQKN 120
Query: 253 VLPADREPEQNFDASQRGKLPDMAHNSQAGNLGFQGSMSMPQKNAPGPINISGKIVGDST 74
L A P Q DASQR +LP++A++SQA +LG+QGS M K A +N S IVG+
Sbjct: 121 NLTAVGGPAQPVDASQRVRLPEVANSSQAAHLGYQGSEIMLHKTATDRMNNSENIVGEPA 180
Query: 73 PLTNPNVGSSRGVPQIIPPNTVNS 2
L PN GSS+GVPQ P N +NS
Sbjct: 181 SLVYPNTGSSKGVPQ-APSNLMNS 203
>emb|CDP13267.1| unnamed protein product [Coffea canephora]
Length = 655
Score = 211 bits (537), Expect = 3e-52
Identities = 112/209 (53%), Positives = 141/209 (67%), Gaps = 5/209 (2%)
Frame = -1
Query: 613 DPMADEQLDFGDEEFGGSQRMQYHQGGAIPALAEEEMLGEDDEYDDLYNDVNVGESFLQL 434
DP DEQLDFGDEE+GGSQ+MQYH+GGAIPALAE+EM+ EDDEYDDLYNDVNVGE FLQ+
Sbjct: 2 DPGGDEQLDFGDEEYGGSQKMQYHRGGAIPALAEDEMINEDDEYDDLYNDVNVGEGFLQM 61
Query: 433 ---QRSEVQMPSDGANKGGLQAPNPNAPETRAEAIGSQEVRVSGVENGGSYTPLGVQFHV 263
QRSE G GG AP + + RAE + +Q V + G YT GV+F
Sbjct: 62 QQQQRSETPRAPLGVGNGGFPAPRASVQDPRAETVVTQGVNIPRSATEGKYTNSGVRFPD 121
Query: 262 QKSVLPADREPEQNFDASQRGKLPDMAHNSQAGNLGFQGSM--SMPQKNAPGPINISGKI 89
QKS L +D DASQ+G+ P++ HNSQAGNLG+QGSM +M QK +++SGK+
Sbjct: 122 QKSGLASDVGALPGTDASQKGRAPEIIHNSQAGNLGYQGSMAVAMSQKVGVESLDMSGKV 181
Query: 88 VGDSTPLTNPNVGSSRGVPQIIPPNTVNS 2
G+ PL NP G+ R +PQ +P N ++S
Sbjct: 182 TGEPGPLLNPVAGAPRVIPQ-VPANHMSS 209
>ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Solanum tuberosum]
gi|565349616|ref|XP_006341787.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit CG7185-like
isoform X2 [Solanum tuberosum]
Length = 648
Score = 206 bits (525), Expect = 7e-51
Identities = 109/206 (52%), Positives = 135/206 (65%), Gaps = 2/206 (0%)
Frame = -1
Query: 613 DPMADEQLDFGDEEFGGSQRMQYHQGGAIPALAEEEMLGEDDEYDDLYNDVNVGESFLQL 434
DP ADEQLD+GDEE+GGS +MQYH G IPALAE+EM+GEDDEYDDLYNDVN+GE FLQL
Sbjct: 2 DPTADEQLDYGDEEYGGSHKMQYHGSGTIPALAEDEMMGEDDEYDDLYNDVNIGEGFLQL 61
Query: 433 QRSEVQMPSDGANKGGLQAPNPNAPETRAEAIGSQEVRVSGVENGGSYTPLGVQFHVQKS 254
QRSEV +PS A G QA + P +RA +GS+E ++ G+ G Y VQF QK
Sbjct: 62 QRSEVPVPSVDAGNGNFQAQKDSFPASRAGGLGSEEAKIPGIATEGKYAGTEVQFPQQKG 121
Query: 253 VLPADREPEQNFDASQRGK--LPDMAHNSQAGNLGFQGSMSMPQKNAPGPINISGKIVGD 80
+RE E+ DA+Q+ + M NSQAGN G+QGSM MPQK P+ + K +
Sbjct: 122 EPVVERETERPADAAQKARPSAITMTLNSQAGNSGYQGSMPMPQKIGADPMAMPEKNASE 181
Query: 79 STPLTNPNVGSSRGVPQIIPPNTVNS 2
+TPL N V R VP +P N +NS
Sbjct: 182 ATPLMNSVVPGPRVVPH-MPTNQLNS 206
>ref|XP_009619090.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6 [Nicotiana tomentosiformis]
Length = 648
Score = 203 bits (517), Expect = 6e-50
Identities = 108/206 (52%), Positives = 136/206 (66%), Gaps = 2/206 (0%)
Frame = -1
Query: 613 DPMADEQLDFGDEEFGGSQRMQYHQGGAIPALAEEEMLGEDDEYDDLYNDVNVGESFLQL 434
DP ADEQLD+GDEE+GGS +MQYH GG IPALAE+EM+GEDDEYDDLYNDVNVGE FLQL
Sbjct: 2 DPTADEQLDYGDEEYGGSHKMQYHGGGTIPALAEDEMMGEDDEYDDLYNDVNVGEGFLQL 61
Query: 433 QRSEVQMPSDGANKGGLQAPNPNAPETRAEAIGSQEVRVSGVENGGSYTPLGVQFHVQKS 254
QRSE +P A G + + P+ +A+ IGS E ++ GV G Y V+F QKS
Sbjct: 62 QRSEAPVPPVDAGNGSFRDQKASFPDAKADGIGSDEAKIPGVATEGKYAGTEVRFPEQKS 121
Query: 253 VLPADREPEQNFDASQRGKLPDM--AHNSQAGNLGFQGSMSMPQKNAPGPINISGKIVGD 80
A+R E+ DA+Q+G+ M +SQ GN G+QGS+ QK PIN+ K +
Sbjct: 122 GPVAERGTERPADAAQKGRPLAMMLTGDSQMGNSGYQGSIPTTQKIGADPINMPEKNANE 181
Query: 79 STPLTNPNVGSSRGVPQIIPPNTVNS 2
+TPL N VG SR VPQ +P N ++S
Sbjct: 182 ATPLVNSGVGGSRVVPQ-MPTNQLSS 206
>ref|XP_009780918.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6 [Nicotiana sylvestris]
Length = 648
Score = 198 bits (504), Expect = 2e-48
Identities = 106/206 (51%), Positives = 133/206 (64%), Gaps = 2/206 (0%)
Frame = -1
Query: 613 DPMADEQLDFGDEEFGGSQRMQYHQGGAIPALAEEEMLGEDDEYDDLYNDVNVGESFLQL 434
DP ADEQLD+GDEE+GGS +MQYH GG IPALAE+EM+GEDDEYDDLYNDVNVGE FLQL
Sbjct: 2 DPTADEQLDYGDEEYGGSHKMQYHGGGTIPALAEDEMMGEDDEYDDLYNDVNVGEGFLQL 61
Query: 433 QRSEVQMPSDGANKGGLQAPNPNAPETRAEAIGSQEVRVSGVENGGSYTPLGVQFHVQKS 254
QRSE +P A Q + P+ +A+ IGS E ++ GV G Y V+F QKS
Sbjct: 62 QRSEAPVPPVDAGNVSFQDQKASFPDAKADGIGSDEAKIPGVATEGKYAGTEVRFPEQKS 121
Query: 253 VLPADREPEQNFDASQRGKLPDM--AHNSQAGNLGFQGSMSMPQKNAPGPINISGKIVGD 80
+R E+ DA+Q+G+ M +SQ GN G+QGS+ QK PIN+ K +
Sbjct: 122 GPVVERGTERPADAAQKGRPLAMMLTRDSQVGNSGYQGSIQTTQKIGADPINMPEKNANE 181
Query: 79 STPLTNPNVGSSRGVPQIIPPNTVNS 2
+TPL N VG SR V Q +P N ++S
Sbjct: 182 ATPLVNSGVGGSRVVTQ-MPTNQLSS 206
>ref|XP_010320954.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 6 [Solanum lycopersicum]
Length = 648
Score = 181 bits (458), Expect = 4e-43
Identities = 100/206 (48%), Positives = 127/206 (61%), Gaps = 2/206 (0%)
Frame = -1
Query: 613 DPMADEQLDFGDEEFGGSQRMQYHQGGAIPALAEEEMLGEDDEYDDLYNDVNVGESFLQL 434
DP ADEQLD+GDEE+ GS +MQYH G I ALAE+EMLGEDDEYD LYNDVN+GE FL L
Sbjct: 2 DPTADEQLDYGDEEYRGSHKMQYHVSGTIHALAEDEMLGEDDEYDYLYNDVNIGEGFLXL 61
Query: 433 QRSEVQMPSDGANKGGLQAPNPNAPETRAEAIGSQEVRVSGVENGGSYTPLGVQFHVQKS 254
QRS+V +PS A G Q + P +R +GS+E ++ G+ +Y VQF Q
Sbjct: 62 QRSKVPVPSVDAGNGSFQVQKDSFPASRXGGLGSEEAKIPGIATKENYAGTEVQFPQQNG 121
Query: 253 VLPADREPEQNFDASQRGK--LPDMAHNSQAGNLGFQGSMSMPQKNAPGPINISGKIVGD 80
+RE E+ DA+Q+ + M NSQ GN G+QGSM MPQK P+ + V +
Sbjct: 122 GSLVERETERPADAAQKSRPSALTMNLNSQVGNSGYQGSMPMPQKIGADPMAMPEINVSE 181
Query: 79 STPLTNPNVGSSRGVPQIIPPNTVNS 2
+TPL N V R V Q +P N +NS
Sbjct: 182 ATPLVNSVVAGPR-VVQHMPTNQLNS 206
>ref|XP_010650880.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 isoform X2 [Vitis vinifera]
gi|731372808|ref|XP_010650883.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit CG7185
isoform X2 [Vitis vinifera]
gi|731372811|ref|XP_010650886.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit CG7185
isoform X2 [Vitis vinifera]
Length = 650
Score = 179 bits (455), Expect = 9e-43
Identities = 95/204 (46%), Positives = 126/204 (61%), Gaps = 7/204 (3%)
Frame = -1
Query: 613 DPMADEQLDFGDEEFGGSQRMQYHQGGAIPALAEEEMLGEDDEYDDLYNDVNVGESFLQL 434
DPMA+EQLD+ DEE+GG+Q+M + GGAI ALA++E++GEDDEYDDLYNDVNVGE FLQ+
Sbjct: 2 DPMAEEQLDYEDEEYGGAQKMPFQGGGAISALADDELMGEDDEYDDLYNDVNVGEGFLQM 61
Query: 433 QRSEVQMPSDGANKGGLQAPNPNAPETRAEAIGSQEVRVSGVENGGSYTPLGVQFHVQKS 254
RSE PS G QA + P + EA SQ + + GV G Y+ FH +K
Sbjct: 62 HRSEAPAPSGVMAGGPFQAHKTDVPPQKLEAGTSQGLIIPGVSIEGKYS--NPHFHEKKE 119
Query: 253 VLPADREPEQNF-------DASQRGKLPDMAHNSQAGNLGFQGSMSMPQKNAPGPINISG 95
A + PE SQ+G++ +M H++Q NLGFQGS +PQK P ++ G
Sbjct: 120 GPMAVKGPEMGSTSHLDGPSVSQKGRVLEMTHDTQVRNLGFQGSTPIPQKTGAEPSDVHG 179
Query: 94 KIVGDSTPLTNPNVGSSRGVPQII 23
KI +STP+ N G R VPQ++
Sbjct: 180 KIANESTPVLNSGTGGPRAVPQML 203
>ref|XP_002282072.3| PREDICTED: cleavage and polyadenylation specificity factor subunit
6 isoform X1 [Vitis vinifera]
Length = 656
Score = 179 bits (455), Expect = 9e-43
Identities = 95/204 (46%), Positives = 126/204 (61%), Gaps = 7/204 (3%)
Frame = -1
Query: 613 DPMADEQLDFGDEEFGGSQRMQYHQGGAIPALAEEEMLGEDDEYDDLYNDVNVGESFLQL 434
DPMA+EQLD+ DEE+GG+Q+M + GGAI ALA++E++GEDDEYDDLYNDVNVGE FLQ+
Sbjct: 8 DPMAEEQLDYEDEEYGGAQKMPFQGGGAISALADDELMGEDDEYDDLYNDVNVGEGFLQM 67
Query: 433 QRSEVQMPSDGANKGGLQAPNPNAPETRAEAIGSQEVRVSGVENGGSYTPLGVQFHVQKS 254
RSE PS G QA + P + EA SQ + + GV G Y+ FH +K
Sbjct: 68 HRSEAPAPSGVMAGGPFQAHKTDVPPQKLEAGTSQGLIIPGVSIEGKYS--NPHFHEKKE 125
Query: 253 VLPADREPEQNF-------DASQRGKLPDMAHNSQAGNLGFQGSMSMPQKNAPGPINISG 95
A + PE SQ+G++ +M H++Q NLGFQGS +PQK P ++ G
Sbjct: 126 GPMAVKGPEMGSTSHLDGPSVSQKGRVLEMTHDTQVRNLGFQGSTPIPQKTGAEPSDVHG 185
Query: 94 KIVGDSTPLTNPNVGSSRGVPQII 23
KI +STP+ N G R VPQ++
Sbjct: 186 KIANESTPVLNSGTGGPRAVPQML 209
>ref|XP_008221952.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 [Prunus mume]
Length = 647
Score = 177 bits (449), Expect = 4e-42
Identities = 94/210 (44%), Positives = 127/210 (60%), Gaps = 7/210 (3%)
Frame = -1
Query: 613 DPMADEQLDFGDEEFGGSQRMQYHQGGAIPALAEEEMLGEDDEYDDLYNDVNVGESFLQL 434
DPMA+EQ+D+ DEE+GG+Q++QY GAI ALA+EE + EDDEYDDLYNDVNVGE FLQ+
Sbjct: 2 DPMAEEQIDYEDEEYGGAQKLQYQGSGAISALADEEPMVEDDEYDDLYNDVNVGEGFLQM 61
Query: 433 QRSEVQMPSDGANKGGLQAPNPNAPETRAEAIGSQEVRVSGVENGGSYTPLGVQFHVQKS 254
RSE +P G GGLQA + ETR +A SQE ++ GV G Y+ QF Q+
Sbjct: 62 HRSEAPLPPGGVGNGGLQAQKTDVTETRVQAGVSQESKIPGVSVQGKYSSAVAQFPEQQD 121
Query: 253 VLPADREPE-------QNFDASQRGKLPDMAHNSQAGNLGFQGSMSMPQKNAPGPINISG 95
P +EPE SQ+G+ +M+H++Q ++GFQGS +MP +I+G
Sbjct: 122 QPPVAKEPELGSTGYVGGASGSQKGRAMEMSHDTQVRHMGFQGSTTMPPNIGGDSSDITG 181
Query: 94 KIVGDSTPLTNPNVGSSRGVPQIIPPNTVN 5
K +S P N GV Q +P N ++
Sbjct: 182 KTALESVPSMNSGTAGPTGVTQ-MPTNQIS 210
>ref|XP_007044909.1| RNA-binding family protein isoform 6 [Theobroma cacao]
gi|508708844|gb|EOY00741.1| RNA-binding family protein
isoform 6 [Theobroma cacao]
Length = 602
Score = 177 bits (448), Expect = 6e-42
Identities = 97/211 (45%), Positives = 121/211 (57%), Gaps = 7/211 (3%)
Frame = -1
Query: 613 DPMADEQLDFGDEEFGGSQRMQYHQGGAIPALAEEEMLGEDDEYDDLYNDVNVGESFLQL 434
D MA+EQ+DFGDEE+GG Q+MQY GAIPALA+EEM+GEDDEYDDLYNDVNVGE FLQL
Sbjct: 2 DAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQL 61
Query: 433 QRSEVQMPSDGANKGGLQAPNPNAPETRAEAIGSQEVRVSGVENGGSYTPLGVQFHVQKS 254
QRSE + G GL+A APE R EA GSQ + + GV G + + ++ +K
Sbjct: 62 QRSEAPLQPGGLGSTGLKAQRNEAPEPRVEAGGSQGLNIPGVSVQGKHPNVSARY-PEKE 120
Query: 253 VLPADREPE-------QNFDASQRGKLPDMAHNSQAGNLGFQGSMSMPQKNAPGPINISG 95
PA PE SQ+G + + H+ Q NLGFQG S K P +
Sbjct: 121 EQPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVPQ 180
Query: 94 KIVGDSTPLTNPNVGSSRGVPQIIPPNTVNS 2
KI D N G +G P +PPN + +
Sbjct: 181 KIANDPAQSLNSGTGGPQGPPH-VPPNQMGT 210
>ref|XP_007044908.1| RNA-binding family protein isoform 5, partial [Theobroma cacao]
gi|508708843|gb|EOY00740.1| RNA-binding family protein
isoform 5, partial [Theobroma cacao]
Length = 656
Score = 177 bits (448), Expect = 6e-42
Identities = 97/211 (45%), Positives = 121/211 (57%), Gaps = 7/211 (3%)
Frame = -1
Query: 613 DPMADEQLDFGDEEFGGSQRMQYHQGGAIPALAEEEMLGEDDEYDDLYNDVNVGESFLQL 434
D MA+EQ+DFGDEE+GG Q+MQY GAIPALA+EEM+GEDDEYDDLYNDVNVGE FLQL
Sbjct: 2 DAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQL 61
Query: 433 QRSEVQMPSDGANKGGLQAPNPNAPETRAEAIGSQEVRVSGVENGGSYTPLGVQFHVQKS 254
QRSE + G GL+A APE R EA GSQ + + GV G + + ++ +K
Sbjct: 62 QRSEAPLQPGGLGSTGLKAQRNEAPEPRVEAGGSQGLNIPGVSVQGKHPNVSARY-PEKE 120
Query: 253 VLPADREPE-------QNFDASQRGKLPDMAHNSQAGNLGFQGSMSMPQKNAPGPINISG 95
PA PE SQ+G + + H+ Q NLGFQG S K P +
Sbjct: 121 EQPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVPQ 180
Query: 94 KIVGDSTPLTNPNVGSSRGVPQIIPPNTVNS 2
KI D N G +G P +PPN + +
Sbjct: 181 KIANDPAQSLNSGTGGPQGPPH-VPPNQMGT 210
>ref|XP_007044907.1| RNA-binding family protein isoform 4 [Theobroma cacao]
gi|508708842|gb|EOY00739.1| RNA-binding family protein
isoform 4 [Theobroma cacao]
Length = 697
Score = 177 bits (448), Expect = 6e-42
Identities = 97/211 (45%), Positives = 121/211 (57%), Gaps = 7/211 (3%)
Frame = -1
Query: 613 DPMADEQLDFGDEEFGGSQRMQYHQGGAIPALAEEEMLGEDDEYDDLYNDVNVGESFLQL 434
D MA+EQ+DFGDEE+GG Q+MQY GAIPALA+EEM+GEDDEYDDLYNDVNVGE FLQL
Sbjct: 2 DAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQL 61
Query: 433 QRSEVQMPSDGANKGGLQAPNPNAPETRAEAIGSQEVRVSGVENGGSYTPLGVQFHVQKS 254
QRSE + G GL+A APE R EA GSQ + + GV G + + ++ +K
Sbjct: 62 QRSEAPLQPGGLGSTGLKAQRNEAPEPRVEAGGSQGLNIPGVSVQGKHPNVSARY-PEKE 120
Query: 253 VLPADREPE-------QNFDASQRGKLPDMAHNSQAGNLGFQGSMSMPQKNAPGPINISG 95
PA PE SQ+G + + H+ Q NLGFQG S K P +
Sbjct: 121 EQPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVPQ 180
Query: 94 KIVGDSTPLTNPNVGSSRGVPQIIPPNTVNS 2
KI D N G +G P +PPN + +
Sbjct: 181 KIANDPAQSLNSGTGGPQGPPH-VPPNQMGT 210
>ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|590695496|ref|XP_007044905.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|590695500|ref|XP_007044906.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|508708839|gb|EOY00736.1| RNA-binding family protein
isoform 1 [Theobroma cacao] gi|508708840|gb|EOY00737.1|
RNA-binding family protein isoform 1 [Theobroma cacao]
gi|508708841|gb|EOY00738.1| RNA-binding family protein
isoform 1 [Theobroma cacao]
Length = 652
Score = 177 bits (448), Expect = 6e-42
Identities = 97/211 (45%), Positives = 121/211 (57%), Gaps = 7/211 (3%)
Frame = -1
Query: 613 DPMADEQLDFGDEEFGGSQRMQYHQGGAIPALAEEEMLGEDDEYDDLYNDVNVGESFLQL 434
D MA+EQ+DFGDEE+GG Q+MQY GAIPALA+EEM+GEDDEYDDLYNDVNVGE FLQL
Sbjct: 2 DAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQL 61
Query: 433 QRSEVQMPSDGANKGGLQAPNPNAPETRAEAIGSQEVRVSGVENGGSYTPLGVQFHVQKS 254
QRSE + G GL+A APE R EA GSQ + + GV G + + ++ +K
Sbjct: 62 QRSEAPLQPGGLGSTGLKAQRNEAPEPRVEAGGSQGLNIPGVSVQGKHPNVSARY-PEKE 120
Query: 253 VLPADREPE-------QNFDASQRGKLPDMAHNSQAGNLGFQGSMSMPQKNAPGPINISG 95
PA PE SQ+G + + H+ Q NLGFQG S K P +
Sbjct: 121 EQPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVPQ 180
Query: 94 KIVGDSTPLTNPNVGSSRGVPQIIPPNTVNS 2
KI D N G +G P +PPN + +
Sbjct: 181 KIANDPAQSLNSGTGGPQGPPH-VPPNQMGT 210
>ref|XP_008389755.1| PREDICTED: RNA-binding protein FUS-like [Malus domestica]
gi|657994880|ref|XP_008389756.1| PREDICTED: RNA-binding
protein FUS-like [Malus domestica]
Length = 658
Score = 176 bits (446), Expect = 1e-41
Identities = 95/210 (45%), Positives = 125/210 (59%), Gaps = 7/210 (3%)
Frame = -1
Query: 613 DPMADEQLDFGDEEFGGSQRMQYHQGGAIPALAEEEMLGEDDEYDDLYNDVNVGESFLQL 434
DPM DEQ+D+ DEE+GGSQ++QY GAI ALA+EE + EDDEYDDLYNDVNVGE F+Q+
Sbjct: 2 DPMGDEQIDYEDEEYGGSQKLQYQGSGAISALADEEPMVEDDEYDDLYNDVNVGEGFMQM 61
Query: 433 QRSEVQMPSDGANKGGLQAPNPNAPETRAEAIGSQEVRVSGVENGGSYTPLGVQFHVQKS 254
RSE +P G GGLQA N PE RA A SQ++++ GV G Y+ G QF Q
Sbjct: 62 HRSEAPVPPGGVGNGGLQAQKTNVPEPRARAGVSQDLKIPGVSVQGKYSGAGAQFPEQNQ 121
Query: 253 VLPADREPE-------QNFDASQRGKLPDMAHNSQAGNLGFQGSMSMPQKNAPGPINISG 95
P +EPE SQ+G++ +M H++Q +GFQGS ++P +I+G
Sbjct: 122 P-PVAKEPELGSTGYVGGASGSQKGRVMEMTHDTQVRQMGFQGSTTIPPNVGIDSSDITG 180
Query: 94 KIVGDSTPLTNPNVGSSRGVPQIIPPNTVN 5
K + P NP G Q IP N ++
Sbjct: 181 KGNSEYIPSLNPGTAGPPGAAQ-IPTNQMS 209
>ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Citrus sinensis]
Length = 658
Score = 173 bits (438), Expect = 8e-41
Identities = 89/207 (42%), Positives = 118/207 (57%), Gaps = 7/207 (3%)
Frame = -1
Query: 613 DPMADEQLDFGDEEFGGSQRMQYHQGGAIPALAEEEMLGEDDEYDDLYNDVNVGESFLQL 434
D MA+EQ+D+ +EE+GG+Q+MQY GGAIPALA+EE++GEDDEYDDLYNDVNVG+ LQ
Sbjct: 2 DSMAEEQIDYEEEEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQF 61
Query: 433 QRSEVQMPSDGANKGGLQAPNPNAPETRAEAIGSQEVRVSGVENGGSYTPLGVQFHVQKS 254
Q+ E PS G G LQ + PE + +A SQ V GV G YT G F Q
Sbjct: 62 QQPEAPPPSAGVGNGRLQVKKTDVPEQQVQAGVSQGSNVPGVSVEGKYTNAGTHFPAQND 121
Query: 253 VLPADREPE-------QNFDASQRGKLPDMAHNSQAGNLGFQGSMSMPQKNAPGPINISG 95
V A P SQ+G + + H++ N+GFQGS S P + P N+ G
Sbjct: 122 VQVAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNMPG 181
Query: 94 KIVGDSTPLTNPNVGSSRGVPQIIPPN 14
++ + P+ NP +G +IP N
Sbjct: 182 RVANEPAPVLNPGAAGPQGA--LIPAN 206
>ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citrus clementina]
gi|557540375|gb|ESR51419.1| hypothetical protein
CICLE_v10030915mg [Citrus clementina]
Length = 658
Score = 172 bits (437), Expect = 1e-40
Identities = 89/207 (42%), Positives = 118/207 (57%), Gaps = 7/207 (3%)
Frame = -1
Query: 613 DPMADEQLDFGDEEFGGSQRMQYHQGGAIPALAEEEMLGEDDEYDDLYNDVNVGESFLQL 434
D MA+EQ+D+ +EE+GG+Q+MQY GGAIPALA+EE++GEDDEYDDLYNDVNVG+ LQ
Sbjct: 2 DSMAEEQIDYEEEEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQF 61
Query: 433 QRSEVQMPSDGANKGGLQAPNPNAPETRAEAIGSQEVRVSGVENGGSYTPLGVQFHVQKS 254
Q+ E PS G G LQ + PE + +A SQ V GV G YT G F Q
Sbjct: 62 QQPEAPPPSAGVGNGRLQVKKTDVPEQQVQAGVSQGSNVPGVSVEGKYTNAGTHFPAQND 121
Query: 253 VLPADREPE-------QNFDASQRGKLPDMAHNSQAGNLGFQGSMSMPQKNAPGPINISG 95
V A P SQ+G + + H++ N+GFQGS S P + P N+ G
Sbjct: 122 VQVAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPPRTGVDPSNMPG 181
Query: 94 KIVGDSTPLTNPNVGSSRGVPQIIPPN 14
++ + P+ NP +G +IP N
Sbjct: 182 RVANEPAPVLNPGAAGPQGA--LIPAN 206
>ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Citrus sinensis]
Length = 655
Score = 172 bits (436), Expect = 1e-40
Identities = 87/205 (42%), Positives = 117/205 (57%), Gaps = 7/205 (3%)
Frame = -1
Query: 607 MADEQLDFGDEEFGGSQRMQYHQGGAIPALAEEEMLGEDDEYDDLYNDVNVGESFLQLQR 428
MA+EQ+D+ ++E+GG+Q+MQY GGAIPALA+EE++GEDDEYDDLYNDVNVG+ LQ Q+
Sbjct: 1 MAEEQIDYEEDEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQFQQ 60
Query: 427 SEVQMPSDGANKGGLQAPNPNAPETRAEAIGSQEVRVSGVENGGSYTPLGVQFHVQKSVL 248
E PS G G LQ + PE R + GSQ + GV G YT G F Q V
Sbjct: 61 PEAPPPSAGVGNGRLQVKKTDVPEQRVQVGGSQGSNIPGVSVEGKYTNAGSHFPAQNDVQ 120
Query: 247 PADREPE-------QNFDASQRGKLPDMAHNSQAGNLGFQGSMSMPQKNAPGPINISGKI 89
A P SQ+G + + H++ N+GFQGS S P + P N+ G++
Sbjct: 121 VAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNMPGRV 180
Query: 88 VGDSTPLTNPNVGSSRGVPQIIPPN 14
+ P+ NP +G +IP N
Sbjct: 181 ANEPAPVLNPGAAGPQGA--LIPAN 203
>ref|XP_010251347.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Nelumbo
nucifera]
Length = 599
Score = 171 bits (433), Expect = 3e-40
Identities = 98/210 (46%), Positives = 125/210 (59%), Gaps = 7/210 (3%)
Frame = -1
Query: 613 DPMADEQLDFGDEEFGGSQRMQYHQGGAIPALAEEEMLGEDDEYDDLYNDVNVGESFLQL 434
DPMA+EQLD+GDEE+GG Q++QY GGAI ALAEEEM+GEDDEYDDLYNDVNVG+ FL+L
Sbjct: 2 DPMAEEQLDYGDEEYGGGQKIQYQGGGAISALAEEEMMGEDDEYDDLYNDVNVGDGFLKL 61
Query: 433 QRSEVQMPSDGANKGGLQAPNPNAPETRA-EAIGSQEVRVSGVENGGSYTPLGVQFHVQ- 260
QR E +P G GG+QA + +R E GSQEV + GV G + + F Q
Sbjct: 62 QRPEAIVPLGGIGNGGIQAQKTDGSRSRVPEPGGSQEVSIPGVGLEGKGSNMVTGFSEQK 121
Query: 259 KSVLPADREPEQNF-----DASQRGKLPDMAHNSQAGNLGFQGSMSMPQKNAPGPINISG 95
K A E+ SQ+G+ +M N+Q GNLGF+GS +P K P SG
Sbjct: 122 KGGFSAGNGLEEGTGDYPDGVSQKGRPLEMGPNAQGGNLGFRGSAPIPPKVGADPSQXSG 181
Query: 94 KIVGDSTPLTNPNVGSSRGVPQIIPPNTVN 5
K G+S+ L + PQ +P N +N
Sbjct: 182 KFAGESSSLPDSGTAGPXSAPQ-MPSNRMN 210
>ref|XP_012085540.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6-like [Jatropha curcas]
gi|802723858|ref|XP_012085541.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit 6-like
[Jatropha curcas] gi|643714040|gb|KDP26705.1|
hypothetical protein JCGZ_17863 [Jatropha curcas]
Length = 651
Score = 170 bits (431), Expect = 5e-40
Identities = 94/207 (45%), Positives = 129/207 (62%), Gaps = 6/207 (2%)
Frame = -1
Query: 607 MADEQLDFGDEEFGGSQRMQYHQGGAIPALAEEEMLGEDDEYDDLYNDVNVGESFLQLQR 428
MADEQ+D+ DEE+GG+Q+MQY GAIPALAEEEM GEDDEYDDLYNDVNVGE+FLQ+ +
Sbjct: 1 MADEQIDYEDEEYGGAQKMQYQGSGAIPALAEEEM-GEDDEYDDLYNDVNVGENFLQMHQ 59
Query: 427 SEVQMPSDGANKGGLQAPNPNAPETRAEAIGSQEVRVSGVENGGSYTPLGVQFHVQKSVL 248
SEV P+ + GG QA N N P R GSQ + + G G Y+ + F QK V
Sbjct: 60 SEVPPPTTSISSGGFQAQNVNEP--RVGTGGSQGLNIPGGVVEGKYSNVETHFPEQKEVP 117
Query: 247 PADREPEQ------NFDASQRGKLPDMAHNSQAGNLGFQGSMSMPQKNAPGPINISGKIV 86
+ E + +Q+G++ ++ H+SQA N+GFQGS S+P P ++S KI
Sbjct: 118 MGAKGAEMGSVGYPDGSVTQKGRVMEVTHDSQARNIGFQGSSSVPSNVVVDPSDMSRKIP 177
Query: 85 GDSTPLTNPNVGSSRGVPQIIPPNTVN 5
+ P+ N ++ RG+ Q +P N ++
Sbjct: 178 NEPAPVPNTSISGPRGIQQ-LPGNQIS 203