BLASTX nr result
ID: Forsythia23_contig00005850
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia23_contig00005850
(497 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011077346.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 129 6e-28
ref|XP_011094656.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 118 2e-24
ref|XP_012840926.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 115 1e-23
gb|EYU34456.1| hypothetical protein MIMGU_mgv1a010534mg [Erythra... 115 1e-23
ref|XP_006363666.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor... 112 1e-22
ref|XP_006363665.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor... 112 1e-22
ref|XP_002281642.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 112 1e-22
gb|EPS59981.1| hypothetical protein M569_14824, partial [Genlise... 110 3e-22
ref|XP_010312344.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor... 110 5e-22
gb|KDO50691.1| hypothetical protein CISIN_1g030975mg [Citrus sin... 108 2e-21
ref|XP_006428771.1| hypothetical protein CICLE_v10012331mg [Citr... 108 2e-21
ref|XP_006428770.1| hypothetical protein CICLE_v10012331mg [Citr... 108 2e-21
ref|XP_006428769.1| hypothetical protein CICLE_v10012331mg [Citr... 108 2e-21
ref|XP_006428768.1| hypothetical protein CICLE_v10012331mg [Citr... 108 2e-21
ref|XP_006428767.1| hypothetical protein CICLE_v10012331mg [Citr... 108 2e-21
ref|XP_010264653.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 107 3e-21
ref|XP_012082369.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 107 4e-21
ref|XP_010107527.1| 29 kDa ribonucleoprotein B [Morus notabilis]... 106 7e-21
ref|NP_001289491.1| 29 kDa ribonucleoprotein A, chloroplastic [N... 105 1e-20
ref|XP_011048542.1| PREDICTED: ribonucleoprotein At2g37220, chlo... 105 1e-20
>ref|XP_011077346.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic-like [Sesamum
indicum]
Length = 277
Score = 129 bits (325), Expect = 6e-28
Identities = 69/106 (65%), Positives = 81/106 (76%)
Frame = +2
Query: 179 KPLTKSIISLSYNNYNIVNTYSRRPNSKFVRNVAFSSEMDQXXXXXXXXFSGSEEPNYSP 358
KPL K ++ LS VNTY+ R S+FV NVA SSE+D+ FSGSEEP +SP
Sbjct: 37 KPLPKLVLPLS-----TVNTYAHR-TSRFVSNVAVSSELDEEVEDESLDFSGSEEPRFSP 90
Query: 359 DLKLFVGNLPFNVDSAALADLFERAGNVEMVEVIYDKITGRSRGFG 496
DLKLFVGNLPF+VDSA LA LFE+AGNV+MVEVIYDK++GRSRGFG
Sbjct: 91 DLKLFVGNLPFSVDSAGLAGLFEQAGNVQMVEVIYDKMSGRSRGFG 136
>ref|XP_011094656.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic [Sesamum
indicum]
Length = 277
Score = 118 bits (295), Expect = 2e-24
Identities = 67/110 (60%), Positives = 81/110 (73%), Gaps = 4/110 (3%)
Frame = +2
Query: 179 KPLTKSIISLSYNNYNIVNTYSRRPNSKFVRNVAFSSEMDQXXXXXXXX----FSGSEEP 346
KPL K +ISLS +N Y+R +S FVR VA SSE+++ FSG+++P
Sbjct: 32 KPLRKPLISLSS-----INHYARSTSS-FVRCVAVSSELEEEVEDGEEGQIFDFSGADQP 85
Query: 347 NYSPDLKLFVGNLPFNVDSAALADLFERAGNVEMVEVIYDKITGRSRGFG 496
++SPDLKLFVGNLPF VDSAALA LFE+AGNVEMVEVIYDK +GRSRGFG
Sbjct: 86 SFSPDLKLFVGNLPFTVDSAALAGLFEQAGNVEMVEVIYDKFSGRSRGFG 135
Score = 60.5 bits (145), Expect = 4e-07
Identities = 29/55 (52%), Positives = 36/55 (65%)
Frame = +2
Query: 332 GSEEPNYSPDLKLFVGNLPFNVDSAALADLFERAGNVEMVEVIYDKITGRSRGFG 496
G E +Y KL+VGNL + VD+ AL LF GNV+ V+YDK +GRSRGFG
Sbjct: 183 GRERTSYDSTNKLYVGNLAWGVDNLALETLFSEQGNVKEARVVYDKESGRSRGFG 237
>ref|XP_012840926.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic [Erythranthe
guttatus]
Length = 274
Score = 115 bits (288), Expect = 1e-23
Identities = 67/107 (62%), Positives = 78/107 (72%), Gaps = 1/107 (0%)
Frame = +2
Query: 179 KPLTKSIISLSYNNYNIVNTYSRRPNSKFVRNVAFSSEMDQXXXXXXXX-FSGSEEPNYS 355
KPL K +++LS N +T SR FVR VA SSE+D+ FS EE ++S
Sbjct: 38 KPLPKLVLALSPAT-NFAHTTSR-----FVRCVAISSEVDETVEEGEGEDFSAPEEQSFS 91
Query: 356 PDLKLFVGNLPFNVDSAALADLFERAGNVEMVEVIYDKITGRSRGFG 496
PDLKLFVGNLPFNVDSAALA LFE+AGNVEMVEVIYDK++GRSRGFG
Sbjct: 92 PDLKLFVGNLPFNVDSAALAGLFEQAGNVEMVEVIYDKLSGRSRGFG 138
>gb|EYU34456.1| hypothetical protein MIMGU_mgv1a010534mg [Erythranthe guttata]
Length = 309
Score = 115 bits (288), Expect = 1e-23
Identities = 67/107 (62%), Positives = 78/107 (72%), Gaps = 1/107 (0%)
Frame = +2
Query: 179 KPLTKSIISLSYNNYNIVNTYSRRPNSKFVRNVAFSSEMDQXXXXXXXX-FSGSEEPNYS 355
KPL K +++LS N +T SR FVR VA SSE+D+ FS EE ++S
Sbjct: 73 KPLPKLVLALSPAT-NFAHTTSR-----FVRCVAISSEVDETVEEGEGEDFSAPEEQSFS 126
Query: 356 PDLKLFVGNLPFNVDSAALADLFERAGNVEMVEVIYDKITGRSRGFG 496
PDLKLFVGNLPFNVDSAALA LFE+AGNVEMVEVIYDK++GRSRGFG
Sbjct: 127 PDLKLFVGNLPFNVDSAALAGLFEQAGNVEMVEVIYDKLSGRSRGFG 173
>ref|XP_006363666.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic-like isoform
X2 [Solanum tuberosum]
Length = 291
Score = 112 bits (279), Expect = 1e-22
Identities = 60/80 (75%), Positives = 65/80 (81%)
Frame = +2
Query: 257 SKFVRNVAFSSEMDQXXXXXXXXFSGSEEPNYSPDLKLFVGNLPFNVDSAALADLFERAG 436
S+FVRNVA S E DQ EEPN+SPDLKLFVGNLPF+VDSAALA+LFERAG
Sbjct: 63 SRFVRNVALS-EFDQLEDDVGEV---EEEPNFSPDLKLFVGNLPFSVDSAALAELFERAG 118
Query: 437 NVEMVEVIYDKITGRSRGFG 496
NVEMVEVIYDK+TGRSRGFG
Sbjct: 119 NVEMVEVIYDKLTGRSRGFG 138
>ref|XP_006363665.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic-like isoform
X1 [Solanum tuberosum]
Length = 301
Score = 112 bits (279), Expect = 1e-22
Identities = 60/80 (75%), Positives = 65/80 (81%)
Frame = +2
Query: 257 SKFVRNVAFSSEMDQXXXXXXXXFSGSEEPNYSPDLKLFVGNLPFNVDSAALADLFERAG 436
S+FVRNVA S E DQ EEPN+SPDLKLFVGNLPF+VDSAALA+LFERAG
Sbjct: 63 SRFVRNVALS-EFDQLEDDVGEV---EEEPNFSPDLKLFVGNLPFSVDSAALAELFERAG 118
Query: 437 NVEMVEVIYDKITGRSRGFG 496
NVEMVEVIYDK+TGRSRGFG
Sbjct: 119 NVEMVEVIYDKLTGRSRGFG 138
>ref|XP_002281642.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic [Vitis
vinifera]
Length = 288
Score = 112 bits (279), Expect = 1e-22
Identities = 66/117 (56%), Positives = 79/117 (67%), Gaps = 11/117 (9%)
Frame = +2
Query: 179 KPLTKSIISLSYNNYNIV---NTYSRRPNSK--------FVRNVAFSSEMDQXXXXXXXX 325
KP + S SL ++ ++ N+ S P+S+ FVRNVA SS+ +Q
Sbjct: 22 KPTSVSFFSLPFSCSSLKLHSNSISLSPSSRGFLTLSSRFVRNVAVSSDYEQDEDV---- 77
Query: 326 FSGSEEPNYSPDLKLFVGNLPFNVDSAALADLFERAGNVEMVEVIYDKITGRSRGFG 496
S EP++SPDLKLFVGNLPFNVDSA LA LFE+AGNVEMVEVIYDKITGRSRGFG
Sbjct: 78 LSDEGEPSFSPDLKLFVGNLPFNVDSAGLAGLFEQAGNVEMVEVIYDKITGRSRGFG 134
>gb|EPS59981.1| hypothetical protein M569_14824, partial [Genlisea aurea]
Length = 281
Score = 110 bits (276), Expect = 3e-22
Identities = 57/81 (70%), Positives = 66/81 (81%), Gaps = 1/81 (1%)
Frame = +2
Query: 257 SKFVRNVAFSSEMDQXXXXXXXX-FSGSEEPNYSPDLKLFVGNLPFNVDSAALADLFERA 433
S+FV +VA SS +D+ FS S+EPN+SPDLKLFVGNLPFNVDSA LA+LFE+A
Sbjct: 47 SRFVSHVAISSGLDEDLEEGENSEFSVSDEPNFSPDLKLFVGNLPFNVDSAGLAELFEQA 106
Query: 434 GNVEMVEVIYDKITGRSRGFG 496
GNVEMVEVIYDK +GRSRGFG
Sbjct: 107 GNVEMVEVIYDKASGRSRGFG 127
>ref|XP_010312344.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic-like [Solanum
lycopersicum]
Length = 291
Score = 110 bits (274), Expect = 5e-22
Identities = 58/80 (72%), Positives = 64/80 (80%)
Frame = +2
Query: 257 SKFVRNVAFSSEMDQXXXXXXXXFSGSEEPNYSPDLKLFVGNLPFNVDSAALADLFERAG 436
S+F+RNVA S E DQ EEPN+SPDLKLFVGNLPF+VDSA LA+LFERAG
Sbjct: 63 SRFIRNVALS-EFDQLEDDVGEV---EEEPNFSPDLKLFVGNLPFSVDSATLAELFERAG 118
Query: 437 NVEMVEVIYDKITGRSRGFG 496
NVEMVEVIYDK+TGRSRGFG
Sbjct: 119 NVEMVEVIYDKLTGRSRGFG 138
>gb|KDO50691.1| hypothetical protein CISIN_1g030975mg [Citrus sinensis]
Length = 168
Score = 108 bits (269), Expect = 2e-21
Identities = 57/80 (71%), Positives = 62/80 (77%)
Frame = +2
Query: 257 SKFVRNVAFSSEMDQXXXXXXXXFSGSEEPNYSPDLKLFVGNLPFNVDSAALADLFERAG 436
S+FVRNVA SSE DQ S + N+SPDLKLFVGNLPF+VDSA LA LFE AG
Sbjct: 63 SRFVRNVAVSSEFDQEEDL----LSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAG 118
Query: 437 NVEMVEVIYDKITGRSRGFG 496
NVEMVEVIYDK+TGRSRGFG
Sbjct: 119 NVEMVEVIYDKVTGRSRGFG 138
>ref|XP_006428771.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
gi|568855826|ref|XP_006481497.1| PREDICTED:
ribonucleoprotein At2g37220, chloroplastic-like [Citrus
sinensis] gi|557530828|gb|ESR42011.1| hypothetical
protein CICLE_v10012331mg [Citrus clementina]
Length = 282
Score = 108 bits (269), Expect = 2e-21
Identities = 57/80 (71%), Positives = 62/80 (77%)
Frame = +2
Query: 257 SKFVRNVAFSSEMDQXXXXXXXXFSGSEEPNYSPDLKLFVGNLPFNVDSAALADLFERAG 436
S+FVRNVA SSE DQ S + N+SPDLKLFVGNLPF+VDSA LA LFE AG
Sbjct: 63 SRFVRNVAVSSEFDQEEDL----LSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAG 118
Query: 437 NVEMVEVIYDKITGRSRGFG 496
NVEMVEVIYDK+TGRSRGFG
Sbjct: 119 NVEMVEVIYDKVTGRSRGFG 138
>ref|XP_006428770.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
gi|557530827|gb|ESR42010.1| hypothetical protein
CICLE_v10012331mg [Citrus clementina]
Length = 266
Score = 108 bits (269), Expect = 2e-21
Identities = 57/80 (71%), Positives = 62/80 (77%)
Frame = +2
Query: 257 SKFVRNVAFSSEMDQXXXXXXXXFSGSEEPNYSPDLKLFVGNLPFNVDSAALADLFERAG 436
S+FVRNVA SSE DQ S + N+SPDLKLFVGNLPF+VDSA LA LFE AG
Sbjct: 63 SRFVRNVAVSSEFDQEEDL----LSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAG 118
Query: 437 NVEMVEVIYDKITGRSRGFG 496
NVEMVEVIYDK+TGRSRGFG
Sbjct: 119 NVEMVEVIYDKVTGRSRGFG 138
>ref|XP_006428769.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
gi|557530826|gb|ESR42009.1| hypothetical protein
CICLE_v10012331mg [Citrus clementina]
Length = 263
Score = 108 bits (269), Expect = 2e-21
Identities = 57/80 (71%), Positives = 62/80 (77%)
Frame = +2
Query: 257 SKFVRNVAFSSEMDQXXXXXXXXFSGSEEPNYSPDLKLFVGNLPFNVDSAALADLFERAG 436
S+FVRNVA SSE DQ S + N+SPDLKLFVGNLPF+VDSA LA LFE AG
Sbjct: 63 SRFVRNVAVSSEFDQEEDL----LSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAG 118
Query: 437 NVEMVEVIYDKITGRSRGFG 496
NVEMVEVIYDK+TGRSRGFG
Sbjct: 119 NVEMVEVIYDKVTGRSRGFG 138
>ref|XP_006428768.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
gi|557530825|gb|ESR42008.1| hypothetical protein
CICLE_v10012331mg [Citrus clementina]
Length = 271
Score = 108 bits (269), Expect = 2e-21
Identities = 57/80 (71%), Positives = 62/80 (77%)
Frame = +2
Query: 257 SKFVRNVAFSSEMDQXXXXXXXXFSGSEEPNYSPDLKLFVGNLPFNVDSAALADLFERAG 436
S+FVRNVA SSE DQ S + N+SPDLKLFVGNLPF+VDSA LA LFE AG
Sbjct: 63 SRFVRNVAVSSEFDQEEDL----LSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAG 118
Query: 437 NVEMVEVIYDKITGRSRGFG 496
NVEMVEVIYDK+TGRSRGFG
Sbjct: 119 NVEMVEVIYDKVTGRSRGFG 138
>ref|XP_006428767.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
gi|557530824|gb|ESR42007.1| hypothetical protein
CICLE_v10012331mg [Citrus clementina]
Length = 297
Score = 108 bits (269), Expect = 2e-21
Identities = 57/80 (71%), Positives = 62/80 (77%)
Frame = +2
Query: 257 SKFVRNVAFSSEMDQXXXXXXXXFSGSEEPNYSPDLKLFVGNLPFNVDSAALADLFERAG 436
S+FVRNVA SSE DQ S + N+SPDLKLFVGNLPF+VDSA LA LFE AG
Sbjct: 63 SRFVRNVAVSSEFDQEEDL----LSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAG 118
Query: 437 NVEMVEVIYDKITGRSRGFG 496
NVEMVEVIYDK+TGRSRGFG
Sbjct: 119 NVEMVEVIYDKVTGRSRGFG 138
>ref|XP_010264653.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic-like [Nelumbo
nucifera] gi|720027690|ref|XP_010264654.1| PREDICTED: 29
kDa ribonucleoprotein A, chloroplastic-like [Nelumbo
nucifera]
Length = 274
Score = 107 bits (267), Expect = 3e-21
Identities = 57/84 (67%), Positives = 66/84 (78%)
Frame = +2
Query: 245 RRPNSKFVRNVAFSSEMDQXXXXXXXXFSGSEEPNYSPDLKLFVGNLPFNVDSAALADLF 424
R +S+F+RNVA SS+++Q S E N+SPDLKLFVGNLPF+VDSA LA LF
Sbjct: 56 RSLSSRFLRNVAVSSDLEQEEEV----LSDEGEVNFSPDLKLFVGNLPFSVDSAKLAALF 111
Query: 425 ERAGNVEMVEVIYDKITGRSRGFG 496
E+AGNVEMVEVIYDKITGRSRGFG
Sbjct: 112 EQAGNVEMVEVIYDKITGRSRGFG 135
>ref|XP_012082369.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic [Jatropha
curcas] gi|643717678|gb|KDP29121.1| hypothetical protein
JCGZ_16510 [Jatropha curcas]
Length = 285
Score = 107 bits (266), Expect = 4e-21
Identities = 57/84 (67%), Positives = 63/84 (75%), Gaps = 3/84 (3%)
Frame = +2
Query: 254 NSKFVRNVAFSSEMDQXXXXXXXXFSG---SEEPNYSPDLKLFVGNLPFNVDSAALADLF 424
+S+FV NVA SSE Q SEEP++SPDLKLFVGNLPF+VDSA LA LF
Sbjct: 60 SSRFVANVAISSEFGQEEEVSSDGDESGFSSEEPSFSPDLKLFVGNLPFSVDSAQLAGLF 119
Query: 425 ERAGNVEMVEVIYDKITGRSRGFG 496
E AGNVEMVEVIYDK+TGRSRGFG
Sbjct: 120 ESAGNVEMVEVIYDKVTGRSRGFG 143
>ref|XP_010107527.1| 29 kDa ribonucleoprotein B [Morus notabilis]
gi|587929034|gb|EXC16209.1| 29 kDa ribonucleoprotein B
[Morus notabilis]
Length = 296
Score = 106 bits (264), Expect = 7e-21
Identities = 56/79 (70%), Positives = 59/79 (74%)
Frame = +2
Query: 260 KFVRNVAFSSEMDQXXXXXXXXFSGSEEPNYSPDLKLFVGNLPFNVDSAALADLFERAGN 439
+FV VA SSE DQ G EEP +SPDLKLFVGNLPF+VDSA LA LFER GN
Sbjct: 71 RFVPKVAVSSEFDQDEDVLS---DGGEEPGFSPDLKLFVGNLPFSVDSAQLAGLFERTGN 127
Query: 440 VEMVEVIYDKITGRSRGFG 496
VEMVEVIYDK TGRSRGFG
Sbjct: 128 VEMVEVIYDKTTGRSRGFG 146
>ref|NP_001289491.1| 29 kDa ribonucleoprotein A, chloroplastic [Nicotiana sylvestris]
gi|698460317|ref|XP_009781507.1| PREDICTED: 29 kDa
ribonucleoprotein A, chloroplastic [Nicotiana
sylvestris] gi|12230584|sp|Q08935.1|ROC1_NICSY RecName:
Full=29 kDa ribonucleoprotein A, chloroplastic; AltName:
Full=CP29A; Flags: Precursor [Nicotiana sylvestris]
gi|19754|emb|CAA43427.1| 29kD A ribonucleoprotein
[Nicotiana sylvestris]
Length = 273
Score = 105 bits (262), Expect = 1e-20
Identities = 59/102 (57%), Positives = 73/102 (71%), Gaps = 1/102 (0%)
Frame = +2
Query: 194 SIISLSYNNYNI-VNTYSRRPNSKFVRNVAFSSEMDQXXXXXXXXFSGSEEPNYSPDLKL 370
S SL ++ N+ +++ S +S+FVR V S + DQ EE N+SPDLK+
Sbjct: 31 SFFSLPPSSLNLSLSSSSSCFSSRFVRKVTLS-DFDQIEDVEDGDDGVEEERNFSPDLKI 89
Query: 371 FVGNLPFNVDSAALADLFERAGNVEMVEVIYDKITGRSRGFG 496
FVGNLPF+ DSAALA+LFERAGNVEMVEVIYDK+TGRSRGFG
Sbjct: 90 FVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFG 131
>ref|XP_011048542.1| PREDICTED: ribonucleoprotein At2g37220, chloroplastic-like [Populus
euphratica]
Length = 276
Score = 105 bits (262), Expect = 1e-20
Identities = 61/114 (53%), Positives = 76/114 (66%), Gaps = 8/114 (7%)
Frame = +2
Query: 179 KPLTKSIISLSYNN-------YNIVNTYSRRP-NSKFVRNVAFSSEMDQXXXXXXXXFSG 334
KP + S ISLS + + ++P +S+F+R+VA SSE Q F
Sbjct: 26 KPTSLSFISLSSTSSIKPGSLFLSFQQQQQQPLSSRFLRSVAISSEFGQEEDV----FGD 81
Query: 335 SEEPNYSPDLKLFVGNLPFNVDSAALADLFERAGNVEMVEVIYDKITGRSRGFG 496
+EP++SPDL+LFVGNLPFNV SA LADLF+ AGNVEMVEV YDK+TGRSRGFG
Sbjct: 82 GDEPSFSPDLQLFVGNLPFNVSSAQLADLFKSAGNVEMVEVKYDKVTGRSRGFG 135