BLASTX nr result

ID: Forsythia23_contig00005483 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia23_contig00005483
         (456 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011074428.1| PREDICTED: protein DCL, chloroplastic [Sesam...   102   1e-19
ref|XP_012838716.1| PREDICTED: protein DCL, chloroplastic-like [...    94   5e-17
ref|XP_011083836.1| PREDICTED: protein DCL, chloroplastic-like [...    87   6e-15
ref|NP_001233874.1| protein DCL, chloroplastic [Solanum lycopers...    77   3e-12
ref|XP_006354878.1| PREDICTED: protein DCL, chloroplastic-like [...    76   1e-11
ref|XP_009793573.1| PREDICTED: protein DCL, chloroplastic [Nicot...    68   2e-09
emb|CAD12248.1| DCL protein [Coffea arabica]                           66   8e-09
ref|XP_009627784.1| PREDICTED: protein DCL, chloroplastic [Nicot...    65   1e-08
emb|CDP01368.1| unnamed protein product [Coffea canephora]             64   4e-08
ref|XP_002284778.1| PREDICTED: protein DCL, chloroplastic [Vitis...    59   1e-06
ref|XP_008452556.1| PREDICTED: protein DCL, chloroplastic [Cucum...    57   4e-06
ref|XP_012851769.1| PREDICTED: protein DCL, chloroplastic-like [...    56   8e-06

>ref|XP_011074428.1| PREDICTED: protein DCL, chloroplastic [Sesamum indicum]
           gi|747056339|ref|XP_011074429.1| PREDICTED: protein DCL,
           chloroplastic [Sesamum indicum]
          Length = 225

 Score =  102 bits (254), Expect = 1e-19
 Identities = 58/111 (52%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
 Frame = -1

Query: 330 MASFASSILPNIHSLHRKPISLNFLLNPFSITFPLNGSQLCIRCAIKTGSN-GGVVRNGQ 154
           MA  ++S  PNI S H KPIS N  L PFS++FPL  ++L   CAI TGS+ GG V N +
Sbjct: 1   MALISASNSPNIRSFHSKPISKNPNLCPFSLSFPLCKARL---CAINTGSDEGGSVGNSR 57

Query: 153 ESQSYASDMLRKPVVSPAFDGGDGDGESAKEDSDYESEKKSGDVDTWVDWE 1
           ++ SY +D+LRKPVV+      D DG + +   D ES KKSGD DTWVDWE
Sbjct: 58  QAASYGADLLRKPVVASP-PANDDDGSAKESSEDDESGKKSGDGDTWVDWE 107


>ref|XP_012838716.1| PREDICTED: protein DCL, chloroplastic-like [Erythranthe guttatus]
           gi|604331446|gb|EYU36304.1| hypothetical protein
           MIMGU_mgv1a013445mg [Erythranthe guttata]
          Length = 220

 Score = 93.6 bits (231), Expect = 5e-17
 Identities = 50/110 (45%), Positives = 64/110 (58%)
 Frame = -1

Query: 330 MASFASSILPNIHSLHRKPISLNFLLNPFSITFPLNGSQLCIRCAIKTGSNGGVVRNGQE 151
           MAS   S  P+I S HRKPIS N +L+PFS++FP + + L   CA+KTGS+ G       
Sbjct: 1   MASICVSNSPDIRSFHRKPISKNLILSPFSLSFPFHKAPL---CAVKTGSDDGGAAARNS 57

Query: 150 SQSYASDMLRKPVVSPAFDGGDGDGESAKEDSDYESEKKSGDVDTWVDWE 1
              YA+D+LRKP+ S          E  +   +Y  EKK GD DTWVDWE
Sbjct: 58  QTPYAADLLRKPLAS-----SPAPVEQEETVKEYSGEKKGGDGDTWVDWE 102


>ref|XP_011083836.1| PREDICTED: protein DCL, chloroplastic-like [Sesamum indicum]
          Length = 225

 Score = 86.7 bits (213), Expect = 6e-15
 Identities = 58/113 (51%), Positives = 69/113 (61%), Gaps = 3/113 (2%)
 Frame = -1

Query: 330 MASFASSILPNIHSLHRKPISLNFLLNPFSITFPLNGSQLCIRCAIKTGSNG-GVVRNGQ 154
           MAS AS       S  RKPIS N +L PFSI+FPL  ++    CAIK G +G GVVR+ +
Sbjct: 1   MASIASPSWATTRSFQRKPISRNLILFPFSISFPLYKTRF---CAIKAGLDGRGVVRSSR 57

Query: 153 ESQSYASDMLRKPVV-SPAFDGGDGDGESAKEDSDYE-SEKKSGDVDTWVDWE 1
           E+  Y  ++LRKPVV SPA   G+   ES KE    E SE K GD  TWVDWE
Sbjct: 58  ETTVYGENLLRKPVVSSPAALDGE---ESVKEYLGGEGSEPKGGDGGTWVDWE 107


>ref|NP_001233874.1| protein DCL, chloroplastic [Solanum lycopersicum]
           gi|6014934|sp|Q42463.1|DCL_SOLLC RecName: Full=Protein
           DCL, chloroplastic; AltName: Full=Defective chloroplasts
           and leaves protein; Flags: Precursor
           gi|1305531|gb|AAC49433.1| defective chloroplasts and
           leaves; required for chloroplast development and
           palisade cell differentiation in leaves [Solanum
           lycopersicum] gi|1323698|gb|AAC49434.1| DCL [Solanum
           lycopersicum]
          Length = 224

 Score = 77.4 bits (189), Expect = 3e-12
 Identities = 50/115 (43%), Positives = 66/115 (57%), Gaps = 5/115 (4%)
 Frame = -1

Query: 330 MASFASSILPNIHSLHRK----PISLNFLLNPFSITFP-LNGSQLCIRCAIKTGSNGGVV 166
           MAS  +S   N H L RK    PIS + LL+P S++F    G +LC   A+KTGS GG +
Sbjct: 1   MASICTS---NFHFLCRKNNSSPISHHLLLSPSSLSFSRCGGLRLCRCAAVKTGSEGGGI 57

Query: 165 RNGQESQSYASDMLRKPVVSPAFDGGDGDGESAKEDSDYESEKKSGDVDTWVDWE 1
           R+        +++LRKPV+S   +      E  KE+SD E  KKSGD + WVDWE
Sbjct: 58  RSDN------AELLRKPVISTELETTSESEELVKEESDDEVGKKSGDGEGWVDWE 106


>ref|XP_006354878.1| PREDICTED: protein DCL, chloroplastic-like [Solanum tuberosum]
          Length = 224

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 49/115 (42%), Positives = 65/115 (56%), Gaps = 5/115 (4%)
 Frame = -1

Query: 330 MASFASSILPNIHSLHRK----PISLNFLLNPFSITFP-LNGSQLCIRCAIKTGSNGGVV 166
           MAS  +S   N H L RK    PIS + LL+P S++F    G +LC   A+KTGS GG +
Sbjct: 1   MASICTS---NFHFLCRKNNPSPISHHLLLSPSSLSFSRCGGLRLCRCAAVKTGSEGGGI 57

Query: 165 RNGQESQSYASDMLRKPVVSPAFDGGDGDGESAKEDSDYESEKKSGDVDTWVDWE 1
           R+        +++LRKPV+S   +      E  KE+SD E  KK GD + WVDWE
Sbjct: 58  RSDN------AELLRKPVISTELETTSESEELVKEESDDEVGKKGGDGEGWVDWE 106


>ref|XP_009793573.1| PREDICTED: protein DCL, chloroplastic [Nicotiana sylvestris]
          Length = 232

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 48/122 (39%), Positives = 65/122 (53%), Gaps = 12/122 (9%)
 Frame = -1

Query: 330 MASFASSILPNIHSLHRK-------PISLN---FLLNPFSITFPLNGSQLCIRCAIKTGS 181
           MAS  +S  PN H L R        P S++    LL P S++F  +  +LC   A+KTGS
Sbjct: 1   MASICTSNHPNFHFLCRNNPNSNPNPSSISHHHLLLAPSSLSF--SRLRLCHCAAVKTGS 58

Query: 180 NGGVVRNGQESQSYASDMLRKPVVSPAFDGGDGDGESA--KEDSDYESEKKSGDVDTWVD 7
             G       S+S  +++LRKPV+S   +     GE    +E+SD E EKK+GD   WVD
Sbjct: 59  ESG------GSRSDNAELLRKPVISTGLESSSSAGEELVKEEESDDEVEKKNGDEQNWVD 112

Query: 6   WE 1
           WE
Sbjct: 113 WE 114


>emb|CAD12248.1| DCL protein [Coffea arabica]
          Length = 224

 Score = 66.2 bits (160), Expect = 8e-09
 Identities = 46/114 (40%), Positives = 64/114 (56%), Gaps = 4/114 (3%)
 Frame = -1

Query: 330 MASFASSILPNIHSLHRK-PISLNFLLNPFSITF---PLNGSQLCIRCAIKTGSNGGVVR 163
           MAS +SS   N    H    IS N LL+P S++F   P N SQL    A++T S+     
Sbjct: 1   MASISSSKFMNSSPFHNSNSISSNLLLSPPSLSFQLYPYNRSQLRRYAAVRTTSS----- 55

Query: 162 NGQESQSYASDMLRKPVVSPAFDGGDGDGESAKEDSDYESEKKSGDVDTWVDWE 1
            G+ S S+ +++LRKPVVSPA    +G+    +ED  Y S  +  +V+ WVDWE
Sbjct: 56  EGRGSDSFGAELLRKPVVSPAV-VSEGEDSVVEEDDKYRSGGE--EVEAWVDWE 106


>ref|XP_009627784.1| PREDICTED: protein DCL, chloroplastic [Nicotiana tomentosiformis]
          Length = 234

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 48/124 (38%), Positives = 65/124 (52%), Gaps = 14/124 (11%)
 Frame = -1

Query: 330 MASFASSILPNIHSLHRK-------PISLN---FLLNPFSITFPLNGSQLCIRCAIKTGS 181
           MAS  +S  PN H L R        P S++    LL P S++F  +  +LC   A+KTGS
Sbjct: 1   MASICTSNHPNFHFLCRNNPNSNPNPSSISHHHLLLAPSSLSF--SRLRLCHCAAVKTGS 58

Query: 180 NGGVVRNGQESQSYASDMLRKPVVSPAFDGGDGD-GESA---KEDSDYESEKKSGDVDTW 13
             G VR+        +++LRKPV+S   +      GE     +E+SD + EKKSGD   W
Sbjct: 59  ESGGVRSDN------AELLRKPVISTGLESSSSSAGEELVKEEEESDDDVEKKSGDEQNW 112

Query: 12  VDWE 1
           VDWE
Sbjct: 113 VDWE 116


>emb|CDP01368.1| unnamed protein product [Coffea canephora]
          Length = 224

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 45/114 (39%), Positives = 63/114 (55%), Gaps = 4/114 (3%)
 Frame = -1

Query: 330 MASFASSILPNIHSLH-RKPISLNFLLNPFSITF---PLNGSQLCIRCAIKTGSNGGVVR 163
           MAS +SS   N    H    IS N LL+P S++F   P N SQL    A++T S+     
Sbjct: 1   MASISSSKFMNSSPFHGSNSISSNLLLSPPSLSFQLYPYNRSQLRRYAAVRTTSS----- 55

Query: 162 NGQESQSYASDMLRKPVVSPAFDGGDGDGESAKEDSDYESEKKSGDVDTWVDWE 1
            G+ S S+ +++LRKPVVSPA    +G+    +ED  Y    +  +V+ WVDWE
Sbjct: 56  EGRGSDSFGAELLRKPVVSPAV-VSEGEDSVVEEDDKYRGGGE--EVEPWVDWE 106


>ref|XP_002284778.1| PREDICTED: protein DCL, chloroplastic [Vitis vinifera]
          Length = 215

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 46/112 (41%), Positives = 59/112 (52%), Gaps = 2/112 (1%)
 Frame = -1

Query: 330 MASFASSILPNIHSLHRKPISLNFLLNPFSITFPLNGSQLC--IRCAIKTGSNGGVVRNG 157
           MA  ASS+LP    LHR PISL+  L+P   +FP   +     + CA K  S GG + + 
Sbjct: 3   MAYVASSLLPV--RLHRNPISLH--LSPSLRSFPSRQTTSLRPVLCARKPRSPGGKLGS- 57

Query: 156 QESQSYASDMLRKPVVSPAFDGGDGDGESAKEDSDYESEKKSGDVDTWVDWE 1
               + ASD LRKP +SP   G DG G S +E S      K  + + WVDWE
Sbjct: 58  --QDARASDFLRKPTISP---GDDGGGSSVREKS-----YKGREEEEWVDWE 99


>ref|XP_008452556.1| PREDICTED: protein DCL, chloroplastic [Cucumis melo]
          Length = 225

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 46/113 (40%), Positives = 63/113 (55%), Gaps = 3/113 (2%)
 Frame = -1

Query: 330 MASFASSI-LPNIHSLHRKPISLNFLLNPFSITFPLNGSQLCIRCAIKTGSNGGVVRNGQ 154
           MAS  + +  P  HSL+    + + L+  F  T P+N      R A+KTG  G  +R+ Q
Sbjct: 3   MASILTLLPFPPFHSLNPNFFNSSPLILCFP-THPINSFHPSTR-ALKTGPEGSRIRSHQ 60

Query: 153 ESQSYASDMLRKPVVSPAFD--GGDGDGESAKEDSDYESEKKSGDVDTWVDWE 1
           E   Y+SD+LRKPVV PA D  G   D +S++E  + E E    +VD WVDWE
Sbjct: 61  E---YSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEE----EVD-WVDWE 105


>ref|XP_012851769.1| PREDICTED: protein DCL, chloroplastic-like [Erythranthe guttatus]
          Length = 216

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 42/110 (38%), Positives = 55/110 (50%), Gaps = 1/110 (0%)
 Frame = -1

Query: 327 ASFASSILPNIHSLHRKPISLNFLLNPFSITFPLNGSQLCIRCAIKTGSNGGVVRNGQES 148
           AS AS    +  SL R PI  N +L+PFS+  P    +     AI T S+GG        
Sbjct: 3   ASIASLNSTSFRSLRRGPIPQNRILSPFSVYLPFRTIRF---RAITTRSDGG-------G 52

Query: 147 QSYASDMLRKPV-VSPAFDGGDGDGESAKEDSDYESEKKSGDVDTWVDWE 1
            +Y  ++LRKPV + PA D    D E   E  +Y  ++K GD  TW DWE
Sbjct: 53  AAYGPELLRKPVALPPAAD----DYEDPVE--EYSGDEKGGDGSTWQDWE 96


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