BLASTX nr result

ID: Forsythia23_contig00005482 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia23_contig00005482
         (498 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011074428.1| PREDICTED: protein DCL, chloroplastic [Sesam...    85   2e-14
ref|XP_012838716.1| PREDICTED: protein DCL, chloroplastic-like [...    72   1e-10
ref|NP_001233874.1| protein DCL, chloroplastic [Solanum lycopers...    66   8e-09
ref|XP_006354878.1| PREDICTED: protein DCL, chloroplastic-like [...    65   2e-08
ref|XP_011083836.1| PREDICTED: protein DCL, chloroplastic-like [...    64   3e-08
ref|XP_009793573.1| PREDICTED: protein DCL, chloroplastic [Nicot...    59   1e-06

>ref|XP_011074428.1| PREDICTED: protein DCL, chloroplastic [Sesamum indicum]
           gi|747056339|ref|XP_011074429.1| PREDICTED: protein DCL,
           chloroplastic [Sesamum indicum]
          Length = 225

 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 50/111 (45%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
 Frame = -1

Query: 330 MASFASSILPNIHSLHRKPIXXXXXXXXXXXXXXXNGSQLCIRCAIKTGSN-GGVVRNGQ 154
           MA  ++S  PNI S H KPI                 ++LC   AI TGS+ GG V N +
Sbjct: 1   MALISASNSPNIRSFHSKPISKNPNLCPFSLSFPLCKARLC---AINTGSDEGGSVGNSR 57

Query: 153 DSQSYASDMLRKPVVSPAFDGGDGDGESAKEDSDYESEKKSGDGDTWVDWE 1
            + SY +D+LRKPVV+      D DG + +   D ES KKSGDGDTWVDWE
Sbjct: 58  QAASYGADLLRKPVVASP-PANDDDGSAKESSEDDESGKKSGDGDTWVDWE 107


>ref|XP_012838716.1| PREDICTED: protein DCL, chloroplastic-like [Erythranthe guttatus]
           gi|604331446|gb|EYU36304.1| hypothetical protein
           MIMGU_mgv1a013445mg [Erythranthe guttata]
          Length = 220

 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 43/110 (39%), Positives = 53/110 (48%)
 Frame = -1

Query: 330 MASFASSILPNIHSLHRKPIXXXXXXXXXXXXXXXNGSQLCIRCAIKTGSNGGVVRNGQD 151
           MAS   S  P+I S HRKPI               + + LC   A+KTGS+ G       
Sbjct: 1   MASICVSNSPDIRSFHRKPISKNLILSPFSLSFPFHKAPLC---AVKTGSDDGGAAARNS 57

Query: 150 SQSYASDMLRKPVVSPAFDGGDGDGESAKEDSDYESEKKSGDGDTWVDWE 1
              YA+D+LRKP+ S          E  +   +Y  EKK GDGDTWVDWE
Sbjct: 58  QTPYAADLLRKPLAS-----SPAPVEQEETVKEYSGEKKGGDGDTWVDWE 102


>ref|NP_001233874.1| protein DCL, chloroplastic [Solanum lycopersicum]
           gi|6014934|sp|Q42463.1|DCL_SOLLC RecName: Full=Protein
           DCL, chloroplastic; AltName: Full=Defective chloroplasts
           and leaves protein; Flags: Precursor
           gi|1305531|gb|AAC49433.1| defective chloroplasts and
           leaves; required for chloroplast development and
           palisade cell differentiation in leaves [Solanum
           lycopersicum] gi|1323698|gb|AAC49434.1| DCL [Solanum
           lycopersicum]
          Length = 224

 Score = 66.2 bits (160), Expect = 8e-09
 Identities = 34/74 (45%), Positives = 45/74 (60%)
 Frame = -1

Query: 222 GSQLCIRCAIKTGSNGGVVRNGQDSQSYASDMLRKPVVSPAFDGGDGDGESAKEDSDYES 43
           G +LC   A+KTGS GG +R+        +++LRKPV+S   +      E  KE+SD E 
Sbjct: 39  GLRLCRCAAVKTGSEGGGIRSDN------AELLRKPVISTELETTSESEELVKEESDDEV 92

Query: 42  EKKSGDGDTWVDWE 1
            KKSGDG+ WVDWE
Sbjct: 93  GKKSGDGEGWVDWE 106


>ref|XP_006354878.1| PREDICTED: protein DCL, chloroplastic-like [Solanum tuberosum]
          Length = 224

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 33/74 (44%), Positives = 44/74 (59%)
 Frame = -1

Query: 222 GSQLCIRCAIKTGSNGGVVRNGQDSQSYASDMLRKPVVSPAFDGGDGDGESAKEDSDYES 43
           G +LC   A+KTGS GG +R+        +++LRKPV+S   +      E  KE+SD E 
Sbjct: 39  GLRLCRCAAVKTGSEGGGIRSDN------AELLRKPVISTELETTSESEELVKEESDDEV 92

Query: 42  EKKSGDGDTWVDWE 1
            KK GDG+ WVDWE
Sbjct: 93  GKKGGDGEGWVDWE 106


>ref|XP_011083836.1| PREDICTED: protein DCL, chloroplastic-like [Sesamum indicum]
          Length = 225

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 48/113 (42%), Positives = 58/113 (51%), Gaps = 3/113 (2%)
 Frame = -1

Query: 330 MASFASSILPNIHSLHRKPIXXXXXXXXXXXXXXXNGSQLCIRCAIKTGSNG-GVVRNGQ 154
           MAS AS       S  RKPI                 ++ C   AIK G +G GVVR+ +
Sbjct: 1   MASIASPSWATTRSFQRKPISRNLILFPFSISFPLYKTRFC---AIKAGLDGRGVVRSSR 57

Query: 153 DSQSYASDMLRKPVVS-PAFDGGDGDGESAKEDSDYE-SEKKSGDGDTWVDWE 1
           ++  Y  ++LRKPVVS PA   G+   ES KE    E SE K GDG TWVDWE
Sbjct: 58  ETTVYGENLLRKPVVSSPAALDGE---ESVKEYLGGEGSEPKGGDGGTWVDWE 107


>ref|XP_009793573.1| PREDICTED: protein DCL, chloroplastic [Nicotiana sylvestris]
          Length = 232

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 32/74 (43%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
 Frame = -1

Query: 216 QLCIRCAIKTGSNGGVVRNGQDSQSYASDMLRKPVVSPAFDGGDGDGESA--KEDSDYES 43
           +LC   A+KTGS  G       S+S  +++LRKPV+S   +     GE    +E+SD E 
Sbjct: 47  RLCHCAAVKTGSESG------GSRSDNAELLRKPVISTGLESSSSAGEELVKEEESDDEV 100

Query: 42  EKKSGDGDTWVDWE 1
           EKK+GD   WVDWE
Sbjct: 101 EKKNGDEQNWVDWE 114


Top