BLASTX nr result

ID: Forsythia23_contig00004915 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia23_contig00004915
         (438 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011239227.1| PREDICTED: mucin-17 isoform X4 [Mus musculus...    61   3e-07
ref|XP_011239226.1| PREDICTED: mucin-17 isoform X3 [Mus musculus]      61   3e-07
ref|XP_006504604.2| PREDICTED: mucin-17 isoform X2 [Mus musculus]      61   3e-07
gb|EDL19282.1| mCG6879, partial [Mus musculus]                         56   8e-06

>ref|XP_011239227.1| PREDICTED: mucin-17 isoform X4 [Mus musculus]
            gi|755514578|ref|XP_011239228.1| PREDICTED: mucin-17
            isoform X5 [Mus musculus]
          Length = 1670

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 50/134 (37%), Positives = 69/134 (51%), Gaps = 1/134 (0%)
 Frame = +3

Query: 39   DMTSAPD-TETASALVEADMTSAPDTGTA*DLT*EADMMTSAPDTGTA*DLT*EADMMTS 215
            D TS  D T T      AD+T+  D  T   +T   D+ T+A  T TA D+T  AD++T+
Sbjct: 648  DFTSTVDVTTTGDVTTTADVTTTSDVTTTSKVTTTGDVTTTADTTSTA-DVTTTADVITT 706

Query: 216  APDTGTA*DLT*EADIMTSAPDTGTA*ALG*EADMTSAPDTETA*ALG*EADMTSAPET* 395
            A  T TA D T   D+ TSA  T TA       D+T+ PD  T   +   AD+T+  E  
Sbjct: 707  AEVTTTA-DFTNTGDVTTSADVTTTA-------DLTTMPDLTTTAEVTTTADVTTTSEFT 758

Query: 396  TA*DLT*EADMMTS 437
            T  D+T  AD+ ++
Sbjct: 759  TTADVTTTADVTST 772



 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 47/131 (35%), Positives = 70/131 (53%)
 Frame = +3

Query: 45   TSAPDTETASALVEADMTSAPDTGTA*DLT*EADMMTSAPDTGTA*DLT*EADMMTSAPD 224
            T+A  T TA     AD+T+  D  T  D+T  AD+ T+   T T  D+T  AD+ T+A  
Sbjct: 1125 TTADTTSTAEVTTTADVTTTADVTTTADVTTTADVTTTVEVTTTG-DVTTTADVTTTAEV 1183

Query: 225  TGTA*DLT*EADIMTSAPDTGTA*ALG*EADMTSAPDTETA*ALG*EADMTSAPET*TA* 404
            T TA ++T   D+ T+A  T TA  +   A++T+  D  T   +   AD+T+  +  T  
Sbjct: 1184 TTTA-EITTTGDVTTTADVTTTA-EVTTTAEITTTGDVTTTADVTTTADVTTTADVTTTI 1241

Query: 405  DLT*EADMMTS 437
            D+T  AD+ TS
Sbjct: 1242 DVTTTADVTTS 1252



 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 49/132 (37%), Positives = 71/132 (53%), Gaps = 1/132 (0%)
 Frame = +3

Query: 36   ADMTSAPD-TETASALVEADMTSAPDTGTA*DLT*EADMMTSAPDTGTA*DLT*EADMMT 212
            AD+T+  D T T+      D+T+  DT +  D+T  AD++T+A  T TA D T   D+ T
Sbjct: 665  ADVTTTSDVTTTSKVTTTGDVTTTADTTSTADVTTTADVITTAEVTTTA-DFTNTGDVTT 723

Query: 213  SAPDTGTA*DLT*EADIMTSAPDTGTA*ALG*EADMTSAPDTETA*ALG*EADMTSAPET 392
            SA  T TA DLT   D+ T+A  T TA  +   ++ T+  D  T   +   AD+T+  E 
Sbjct: 724  SADVTTTA-DLTTMPDLTTTAEVTTTA-DVTTTSEFTTTADVTTTADVTSTADVTTTAEV 781

Query: 393  *TA*DLT*EADM 428
             T  D+T  AD+
Sbjct: 782  TTTGDVTTTADV 793


>ref|XP_011239226.1| PREDICTED: mucin-17 isoform X3 [Mus musculus]
          Length = 1784

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 50/134 (37%), Positives = 69/134 (51%), Gaps = 1/134 (0%)
 Frame = +3

Query: 39   DMTSAPD-TETASALVEADMTSAPDTGTA*DLT*EADMMTSAPDTGTA*DLT*EADMMTS 215
            D TS  D T T      AD+T+  D  T   +T   D+ T+A  T TA D+T  AD++T+
Sbjct: 762  DFTSTVDVTTTGDVTTTADVTTTSDVTTTSKVTTTGDVTTTADTTSTA-DVTTTADVITT 820

Query: 216  APDTGTA*DLT*EADIMTSAPDTGTA*ALG*EADMTSAPDTETA*ALG*EADMTSAPET* 395
            A  T TA D T   D+ TSA  T TA       D+T+ PD  T   +   AD+T+  E  
Sbjct: 821  AEVTTTA-DFTNTGDVTTSADVTTTA-------DLTTMPDLTTTAEVTTTADVTTTSEFT 872

Query: 396  TA*DLT*EADMMTS 437
            T  D+T  AD+ ++
Sbjct: 873  TTADVTTTADVTST 886



 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 47/131 (35%), Positives = 70/131 (53%)
 Frame = +3

Query: 45   TSAPDTETASALVEADMTSAPDTGTA*DLT*EADMMTSAPDTGTA*DLT*EADMMTSAPD 224
            T+A  T TA     AD+T+  D  T  D+T  AD+ T+   T T  D+T  AD+ T+A  
Sbjct: 1239 TTADTTSTAEVTTTADVTTTADVTTTADVTTTADVTTTVEVTTTG-DVTTTADVTTTAEV 1297

Query: 225  TGTA*DLT*EADIMTSAPDTGTA*ALG*EADMTSAPDTETA*ALG*EADMTSAPET*TA* 404
            T TA ++T   D+ T+A  T TA  +   A++T+  D  T   +   AD+T+  +  T  
Sbjct: 1298 TTTA-EITTTGDVTTTADVTTTA-EVTTTAEITTTGDVTTTADVTTTADVTTTADVTTTI 1355

Query: 405  DLT*EADMMTS 437
            D+T  AD+ TS
Sbjct: 1356 DVTTTADVTTS 1366



 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 49/132 (37%), Positives = 71/132 (53%), Gaps = 1/132 (0%)
 Frame = +3

Query: 36   ADMTSAPD-TETASALVEADMTSAPDTGTA*DLT*EADMMTSAPDTGTA*DLT*EADMMT 212
            AD+T+  D T T+      D+T+  DT +  D+T  AD++T+A  T TA D T   D+ T
Sbjct: 779  ADVTTTSDVTTTSKVTTTGDVTTTADTTSTADVTTTADVITTAEVTTTA-DFTNTGDVTT 837

Query: 213  SAPDTGTA*DLT*EADIMTSAPDTGTA*ALG*EADMTSAPDTETA*ALG*EADMTSAPET 392
            SA  T TA DLT   D+ T+A  T TA  +   ++ T+  D  T   +   AD+T+  E 
Sbjct: 838  SADVTTTA-DLTTMPDLTTTAEVTTTA-DVTTTSEFTTTADVTTTADVTSTADVTTTAEV 895

Query: 393  *TA*DLT*EADM 428
             T  D+T  AD+
Sbjct: 896  TTTGDVTTTADV 907


>ref|XP_006504604.2| PREDICTED: mucin-17 isoform X2 [Mus musculus]
          Length = 1802

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 50/134 (37%), Positives = 69/134 (51%), Gaps = 1/134 (0%)
 Frame = +3

Query: 39   DMTSAPD-TETASALVEADMTSAPDTGTA*DLT*EADMMTSAPDTGTA*DLT*EADMMTS 215
            D TS  D T T      AD+T+  D  T   +T   D+ T+A  T TA D+T  AD++T+
Sbjct: 780  DFTSTVDVTTTGDVTTTADVTTTSDVTTTSKVTTTGDVTTTADTTSTA-DVTTTADVITT 838

Query: 216  APDTGTA*DLT*EADIMTSAPDTGTA*ALG*EADMTSAPDTETA*ALG*EADMTSAPET* 395
            A  T TA D T   D+ TSA  T TA       D+T+ PD  T   +   AD+T+  E  
Sbjct: 839  AEVTTTA-DFTNTGDVTTSADVTTTA-------DLTTMPDLTTTAEVTTTADVTTTSEFT 890

Query: 396  TA*DLT*EADMMTS 437
            T  D+T  AD+ ++
Sbjct: 891  TTADVTTTADVTST 904



 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 47/131 (35%), Positives = 70/131 (53%)
 Frame = +3

Query: 45   TSAPDTETASALVEADMTSAPDTGTA*DLT*EADMMTSAPDTGTA*DLT*EADMMTSAPD 224
            T+A  T TA     AD+T+  D  T  D+T  AD+ T+   T T  D+T  AD+ T+A  
Sbjct: 1257 TTADTTSTAEVTTTADVTTTADVTTTADVTTTADVTTTVEVTTTG-DVTTTADVTTTAEV 1315

Query: 225  TGTA*DLT*EADIMTSAPDTGTA*ALG*EADMTSAPDTETA*ALG*EADMTSAPET*TA* 404
            T TA ++T   D+ T+A  T TA  +   A++T+  D  T   +   AD+T+  +  T  
Sbjct: 1316 TTTA-EITTTGDVTTTADVTTTA-EVTTTAEITTTGDVTTTADVTTTADVTTTADVTTTI 1373

Query: 405  DLT*EADMMTS 437
            D+T  AD+ TS
Sbjct: 1374 DVTTTADVTTS 1384



 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 49/132 (37%), Positives = 71/132 (53%), Gaps = 1/132 (0%)
 Frame = +3

Query: 36   ADMTSAPD-TETASALVEADMTSAPDTGTA*DLT*EADMMTSAPDTGTA*DLT*EADMMT 212
            AD+T+  D T T+      D+T+  DT +  D+T  AD++T+A  T TA D T   D+ T
Sbjct: 797  ADVTTTSDVTTTSKVTTTGDVTTTADTTSTADVTTTADVITTAEVTTTA-DFTNTGDVTT 855

Query: 213  SAPDTGTA*DLT*EADIMTSAPDTGTA*ALG*EADMTSAPDTETA*ALG*EADMTSAPET 392
            SA  T TA DLT   D+ T+A  T TA  +   ++ T+  D  T   +   AD+T+  E 
Sbjct: 856  SADVTTTA-DLTTMPDLTTTAEVTTTA-DVTTTSEFTTTADVTTTADVTSTADVTTTAEV 913

Query: 393  *TA*DLT*EADM 428
             T  D+T  AD+
Sbjct: 914  TTTGDVTTTADV 925


>gb|EDL19282.1| mCG6879, partial [Mus musculus]
          Length = 4364

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 44/138 (31%), Positives = 71/138 (51%), Gaps = 5/138 (3%)
 Frame = +3

Query: 39   DMTSAPDTETASALVEADMTSAPDTGTA*DLT*EADMMTSAP-----DTGTA*DLT*EAD 203
            D+T+  D  T   +  AD+T+  +  T  D+T  AD+ T+A      D  T  D+T  AD
Sbjct: 1900 DVTTTADVTTTEVITTADVTTTSEVTTTADVTTRADVTTTADVTTTGDVTTTGDVTTTAD 1959

Query: 204  MMTSAPDTGTA*DLT*EADIMTSAPDTGTA*ALG*EADMTSAPDTETA*ALG*EADMTSA 383
            + T+A  T TA ++T   D++T+A  T T       AD+T+  D  T   +   A++T+ 
Sbjct: 1960 ITTTADITTTA-EITTTGDVITTADVTTT-------ADVTNTVDDTTTDDITTTAEITTI 2011

Query: 384  PET*TA*DLT*EADMMTS 437
             +  T  D+T  AD+ T+
Sbjct: 2012 DDITTTTDVTTTADVTTT 2029


Top