BLASTX nr result

ID: Forsythia23_contig00004340 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia23_contig00004340
         (416 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011072066.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    70   6e-10
ref|XP_011086955.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    66   1e-08
emb|CDO98567.1| unnamed protein product [Coffea canephora]             59   1e-06

>ref|XP_011072066.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Sesamum indicum]
          Length = 380

 Score = 70.1 bits (170), Expect = 6e-10
 Identities = 37/66 (56%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
 Frame = -1

Query: 416 ENRRTGQXXXXXXXXXXXN-LGMGSDGGSQEPGTNNNVQM-PRTSDRRFRISLPWIFRGL 243
           ENRRTGQ             LG G+ GG Q+ G NNN  + PRT +RRFRIS+PW+ RGL
Sbjct: 273 ENRRTGQTNDNSSRNSGNTSLGFGAGGGYQDSGDNNNSSLTPRTMERRFRISVPWLLRGL 332

Query: 242 GSPAET 225
           GSPAET
Sbjct: 333 GSPAET 338


>ref|XP_011086955.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Sesamum indicum]
           gi|747079504|ref|XP_011086956.1| PREDICTED: E3
           ubiquitin-protein ligase RING1-like [Sesamum indicum]
           gi|747079506|ref|XP_011086957.1| PREDICTED: E3
           ubiquitin-protein ligase RING1-like [Sesamum indicum]
          Length = 382

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 37/66 (56%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
 Frame = -1

Query: 416 ENRRTGQXXXXXXXXXXXN-LGMGSDGGSQEP-GTNNNVQMPRTSDRRFRISLPWIFRGL 243
           ENRRTGQ           + +G+G   GSQE    NNN   PR  +RRFRISLPW+FRGL
Sbjct: 275 ENRRTGQMNDNSNRTSNISNIGLGVAAGSQENRDDNNNSTTPRMVERRFRISLPWLFRGL 334

Query: 242 GSPAET 225
           GSPAET
Sbjct: 335 GSPAET 340


>emb|CDO98567.1| unnamed protein product [Coffea canephora]
          Length = 391

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 29/45 (64%), Positives = 31/45 (68%)
 Frame = -1

Query: 359 LGMGSDGGSQEPGTNNNVQMPRTSDRRFRISLPWIFRGLGSPAET 225
           LG GS G S       N Q PRT +RRFRISLPW+FRG GSPAET
Sbjct: 307 LGTGSGGLSGGAVNQENPQTPRTVERRFRISLPWLFRGFGSPAET 351