BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia23_contig00004074
         (1549 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]        251   e-128
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]   260   e-128
gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsi...   253   e-124
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   249   e-121
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   254   e-120
gb|AAK38381.1|AC079028_5 polyprotein, putative [Arabidopsis thal...   243   e-119
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]   231   e-119
dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsi...   245   e-118
emb|CAA31653.1| polyprotein [Arabidopsis thaliana]                    229   e-117
emb|CAA20201.1| putative transposable element [Arabidopsis thali...   233   e-117
gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Ar...   233   e-117
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     247   e-117
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc...   246   e-116
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]     246   e-116
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-...   248   e-115
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc...   248   e-115
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]     246   e-115
pir||S23319 hypothetical protein 2 - Arabidopsis thaliana retrot...   224   e-115
ref|XP_009107606.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   224   e-115
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]           245   e-114

>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
          Length = 1334

 Score =  251 bits (641), Expect(2) = e-128
 Identities = 124/229 (54%), Positives = 164/229 (71%)
 Frame = -2

Query: 687  EAMKEEMDSLIKNETWKLVNKSESQRVVKCKWLYKIKDGVSPHDPPRYKARLVARGFTQL 508
            EAM++EM+SL +N+TW L+    ++R++ CKW++K  +G+   +PP+YKARLVARGFTQ 
Sbjct: 831  EAMQDEMESLQRNQTWTLIPNPGNKRLINCKWIFKRNEGIPDVEPPKYKARLVARGFTQR 890

Query: 507  EGVDYNEAFSPVVKYKTIRVILALVAQFNWELEQLDVKYAFLHGELEEVIYMAQPQGFEV 328
            EGVD+NE FSPVVK+ +IR++LA+VA  + ELEQ+DVK AFLHG LEE I MAQP+GFE 
Sbjct: 891  EGVDFNEIFSPVVKHSSIRILLAMVALLDLELEQMDVKTAFLHGNLEEQILMAQPEGFEC 950

Query: 327  KGRFEKVCLLKKSLYGLKQSPRQWYKRFDNYVLTVKFQRSAYDHCLYFKKDKDDFVTXXX 148
            K + + VCLL KSLYGLKQSPRQWY+RFD+++++  ++RS YD C+YF    D       
Sbjct: 951  KDKEDYVCLLHKSLYGLKQSPRQWYRRFDDFMVSKGYRRSRYDSCVYF-GGSDQGGVAYL 1009

Query: 147  XXXXXXXXXIGSNMHNINEIKMFLCSEFDMKDLGHAKRILGMDIERKRS 1
                            I  +K  L +EF+MKDLG+AKRILGMDI R RS
Sbjct: 1010 LLYVDDMLIASKYKSEIERLKNLLKAEFEMKDLGNAKRILGMDIIRDRS 1058



 Score =  237 bits (605), Expect(2) = e-128
 Identities = 137/277 (49%), Positives = 180/277 (64%), Gaps = 4/277 (1%)
 Frame = -3

Query: 1547 KVKTLRTDNGLEFCNLEFDSFCVEKGIQRHRTVRHTPQQNGVAERLNRTIMDKVKCMVIS 1368
            K+K LRTDNGLEFC+  F+ +C + GI+RH+TVR TPQQNG+AER+NRT++DK +CM+I+
Sbjct: 544  KLKCLRTDNGLEFCSKVFEEYCQKHGIKRHKTVRFTPQQNGLAERMNRTLVDKTRCMLIN 603

Query: 1367 YGLAKGF*REASCTAVYLINRSPSSAINFKTPEELWSGKPPKLSHLRVFGCSAYAHQIEG 1188
              L + F  EA  TA YL+NRSPSSAI FKTPEELW+GKP    +LRVFGC AY H  +G
Sbjct: 604  SKLPRSFWAEAVNTASYLVNRSPSSAIGFKTPEELWNGKPANYQNLRVFGCPAYLHINQG 663

Query: 1187 KLEARAVKCVLLGYPTGVKGYRL*VLGEKCIKIINSRDVVFNEMEMPCLKTESEPKEQPQ 1008
            KLEARA+K V +GYP GVKGY++    +   K I SRDVVF+E  +  LK  +E      
Sbjct: 664  KLEARALKGVFVGYPDGVKGYKIWCKDQG--KCIVSRDVVFHESVL--LKESAE------ 713

Query: 1007 VKNVQIEVETHKFKHLGVDPSVRPQQINVEETAPESPQQQQQPDLNEPKNPSLGEAHEA- 831
              +  ++      K  G + S    ++NVE    +S +++   D  + +  +  E HE  
Sbjct: 714  -HDAGLQDNPAANKRSGSETS----KVNVELLTDKSSEKEAASD--DERATAESEEHEVS 766

Query: 830  ---QVDLQDYQLARDRERREVRPNLRYSSLNLIEYAL 729
               Q DLQ+YQLARDR RREVR  +RY   +LI YAL
Sbjct: 767  ELPQADLQNYQLARDRVRREVRAPVRYGYADLIAYAL 803


>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
          Length = 1562

 Score =  260 bits (665), Expect(2) = e-128
 Identities = 131/228 (57%), Positives = 166/228 (72%), Gaps = 1/228 (0%)
 Frame = -2

Query: 684  AMKEEMDSLIKNETWKLVNKSESQRVVKCKWLYKIKDGVSPHDPPRYKARLVARGFTQLE 505
            +M +EM SL KN+TW+LV   E  + V CKWL+KIKDG+S  +PP+YK+RLVA+GF+Q E
Sbjct: 932  SMDDEMASLRKNQTWELVPLPEGVKPVDCKWLFKIKDGISXDEPPKYKSRLVAKGFSQKE 991

Query: 504  GVDYNEAFSPVVKYKTIRVILALVAQFNWELEQLDVKYAFLHGELEEVIYMAQPQGFEVK 325
            G+DYNE FSPVVK+K+IRV+LA+V+ FN EL+QLDVK AFLHG LEE IYM QP+GF   
Sbjct: 992  GIDYNEVFSPVVKHKSIRVLLAMVSVFNLELDQLDVKTAFLHGNLEEEIYMKQPEGFVDS 1051

Query: 324  GRFEKVCLLKKSLYGLKQSPRQWYKRFDNYVLTVKFQRSAYDHCLYFKKDKD-DFVTXXX 148
             + + VC LKKSLYGLKQSPRQWYKRFD ++++ +F R+ YD C+YFK   D  F+    
Sbjct: 1052 EKSDHVCFLKKSLYGLKQSPRQWYKRFDAFMVSHEFMRNQYDSCVYFKTLPDGSFI--YL 1109

Query: 147  XXXXXXXXXIGSNMHNINEIKMFLCSEFDMKDLGHAKRILGMDIERKR 4
                        N   IN++K  L SEF+MKDLG AK+ILGM+I R R
Sbjct: 1110 LLYVDDMLIAAKNRAEINKLKQLLSSEFEMKDLGAAKKILGMEIWRDR 1157



 Score =  226 bits (576), Expect(2) = e-128
 Identities = 131/289 (45%), Positives = 171/289 (59%), Gaps = 13/289 (4%)
 Frame = -3

Query: 1544 VKTLRTDNGLEFCNLEFDSFCVEKGIQRHRTVRHTPQQNGVAERLNRTIMDKVKCMVISY 1365
            VKTLRTDNGLEFCN +FD FC ++GI RHRTVRHTPQQNGVAER+N+T++ + +CM I  
Sbjct: 654  VKTLRTDNGLEFCNKDFDEFCRKEGIVRHRTVRHTPQQNGVAERMNQTLVQRARCMRIDA 713

Query: 1364 GLAKGF*REASCTAVYLINRSPSSAINFKTPEELWSGKPPKLSHLRVFGCSAYAHQIEGK 1185
            GL+K F  EA  TA YL+NRSPS+AI+FKTP+E+WSGKP   S L++FGC AYAH  +GK
Sbjct: 714  GLSKKFWAEAVNTAAYLVNRSPSTAIDFKTPQEVWSGKPSNYSGLKIFGCPAYAHVSDGK 773

Query: 1184 LEARAVKCVLLGYPTGVKGYRL*VLGEKCIKIINSRDVVFNEMEMPCLKTE------SEP 1023
            LE RA+KC+ LGY TGVKGYRL    ++  K I SRDV F+E  M   + E      +  
Sbjct: 774  LEPRAMKCIFLGYATGVKGYRLWCTEDRTPKFIISRDVTFDESAMFGQRKEFGDLAGTSK 833

Query: 1022 KEQPQVKNVQIEVETHKFKHLGVDPSVRPQQINVEETAPESPQQQQQPDLNEPKNPSLGE 843
             +    + V+ EV+              P +  V++T+ E P                  
Sbjct: 834  TDLGANQKVEFEVDA-------------PMENGVDDTSEEQP------------------ 862

Query: 842  AHEAQVDLQDYQ-LARDRERREVRPNLRY------SSLNLIEYALASGE 717
                 +D  D Q +A  R RRE+R  +RY      +  N + +ALA  E
Sbjct: 863  ----VIDQNDSQSIAAHRPRREIRRPMRYVDCVSANITNPVAFALAVAE 907


>gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1335

 Score =  253 bits (646), Expect(2) = e-124
 Identities = 126/230 (54%), Positives = 160/230 (69%)
 Frame = -2

Query: 693  YKEAMKEEMDSLIKNETWKLVNKSESQRVVKCKWLYKIKDGVSPHDPPRYKARLVARGFT 514
            +  AMKEEM S+ KN TW LV K E  +++ C+W++  K G+   + PR+ ARLVA+GFT
Sbjct: 831  WNAAMKEEMVSMSKNHTWDLVTKPEKVKLIGCRWVFTRKAGIPGVEAPRFIARLVAKGFT 890

Query: 513  QLEGVDYNEAFSPVVKYKTIRVILALVAQFNWELEQLDVKYAFLHGELEEVIYMAQPQGF 334
            Q EGVDYNE FSPVVK+ +IR +L++V  +N EL+Q+DVK AFLHG LEE IYMAQP+GF
Sbjct: 891  QKEGVDYNEIFSPVVKHVSIRYLLSMVVHYNMELQQMDVKTAFLHGFLEEEIYMAQPEGF 950

Query: 333  EVKGRFEKVCLLKKSLYGLKQSPRQWYKRFDNYVLTVKFQRSAYDHCLYFKKDKDDFVTX 154
            E+K    KVCLLK+SLYGLKQSPRQW  RFD ++  +K+ RSAYD C+YFKK   D    
Sbjct: 951  EIKRGSNKVCLLKRSLYGLKQSPRQWNLRFDEFMRGIKYTRSAYDSCVYFKKCNGD-TYI 1009

Query: 153  XXXXXXXXXXXIGSNMHNINEIKMFLCSEFDMKDLGHAKRILGMDIERKR 4
                         +N   +NE+K  L  EF+MKDLG AK+ILGM+I R R
Sbjct: 1010 YLLLYVDDMLIASANKSEVNELKQLLSREFEMKDLGDAKKILGMEISRDR 1059



 Score =  222 bits (566), Expect(2) = e-124
 Identities = 130/286 (45%), Positives = 168/286 (58%), Gaps = 11/286 (3%)
 Frame = -3

Query: 1547 KVKTLRTDNGLEFCNLEFDSFCVEKGIQRHRTVRHTPQQNGVAERLNRTIMDKVKCMVIS 1368
            KVK LRTDNGLE+CN  F+ FC E+GI RH+T  +TPQQNG+AERLNRTIMDKV+ M+  
Sbjct: 536  KVKKLRTDNGLEYCNHYFEKFCKEEGIVRHKTCAYTPQQNGIAERLNRTIMDKVRSMLSR 595

Query: 1367 YGLAKGF*REASCTAVYLINRSPSSAINFKTPEELWSGKPPKLSHLRVFGCSAYAHQIEG 1188
             G+ K F  EA+ TAVYLINRSPS+AINF  PEE W+G  P LS LR FGC AY H  +G
Sbjct: 596  SGMEKKFWAEAASTAVYLINRSPSTAINFDLPEEKWTGALPDLSSLRKFGCLAYIHADQG 655

Query: 1187 KLEARAVKCVLLGYPTGVKGYRL*VLGEKCIKIINSRDVVFNEMEM-PCLKTESEPKEQP 1011
            KL  R+ K +   YP GVKGY++ VL +K  K + SR+V+F E  M   LK +S      
Sbjct: 656  KLNPRSKKGIFTSYPEGVKGYKVWVLEDK--KCVISRNVIFREQVMFKDLKGDS------ 707

Query: 1010 QVKNVQIEVETHKFKHLGVDPSVRPQQI------NVEETAPESPQQQQQPDLNEPKNPSL 849
                 Q  +     + L V+P +  Q+         + + P        P LN P +   
Sbjct: 708  -----QNTISESDLEDLRVNPDMNDQEFTDQGGATQDNSNPSEATTSHNPVLNSPTHSQD 762

Query: 848  GEAHE----AQVDLQDYQLARDRERREVRPNLRYSSLNLIEYALAS 723
             E+ E    A  DL  YQL RDR RR ++ N +Y+  N++ +A  S
Sbjct: 763  EESEEEDSDAVEDLSTYQLVRDRVRRTIKANPKYNESNMVGFAYYS 808


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77548751|gb|ABA91548.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 2340

 Score =  249 bits (636), Expect(2) = e-121
 Identities = 122/227 (53%), Positives = 164/227 (72%)
 Frame = -2

Query: 684  AMKEEMDSLIKNETWKLVNKSESQRVVKCKWLYKIKDGVSPHDPPRYKARLVARGFTQLE 505
            AM +EM+SL KN TW+LV   + ++ ++CKW++K K+G+S  D  RYKARL+A+G++Q+ 
Sbjct: 1041 AMHDEMESLEKNHTWELVKLPKEKKPIRCKWIFKRKEGISSSDEARYKARLIAKGYSQIP 1100

Query: 504  GVDYNEAFSPVVKYKTIRVILALVAQFNWELEQLDVKYAFLHGELEEVIYMAQPQGFEVK 325
            G+D+N+ FSPVVK+ +IR +L++VA  ++ELEQ+DVK AFLHGELEE IYM QP+GF V 
Sbjct: 1101 GIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPKGFVVP 1160

Query: 324  GRFEKVCLLKKSLYGLKQSPRQWYKRFDNYVLTVKFQRSAYDHCLYFKKDKDDFVTXXXX 145
            G+   VC LKKSLYGLKQSPRQWYKRFD+++L+ KF+RS YD C+Y K    D       
Sbjct: 1161 GKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYLK--VVDGSAIYLL 1218

Query: 144  XXXXXXXXIGSNMHNINEIKMFLCSEFDMKDLGHAKRILGMDIERKR 4
                       +   I ++K  L SEF+MKDLG AK+ILGM+I RKR
Sbjct: 1219 LYVDDMLIAAKDKSEIAKLKAQLSSEFEMKDLGAAKKILGMEITRKR 1265



 Score =  214 bits (546), Expect(2) = e-121
 Identities = 131/285 (45%), Positives = 166/285 (58%), Gaps = 8/285 (2%)
 Frame = -3

Query: 1547 KVKTLRTDNGLEFCNLEFDSFCVEKGIQRHRTVRHTPQQNGVAERLNRTIMDKVKCMVIS 1368
            KVK LRTDNG+EFC+  F S+C  +GI RH TV HTPQQNGVAER+NRTI+ K +C++ +
Sbjct: 761  KVKILRTDNGMEFCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRTIISKARCLLSN 820

Query: 1367 YGLAKGF*REASCTAVYLINRSPSSAINFKTPEELWSGKPPKLSHLRVFGCSAYAHQIEG 1188
             GL K F  EA  TA YLINRSPS AI+ KTP E+WSG P   S LRVFGC+AYAH   G
Sbjct: 821  AGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSPANYSDLRVFGCTAYAHVDNG 880

Query: 1187 KLEARAVKCVLLGYPTGVKGYRL*VLGEKCIKIINSRDVVFNEMEMPCLKTESE-PKEQP 1011
            KLE RA+KC+ LGYP+GVKGY+L     K  K++ SR+VVF+E  M   K  +  P E  
Sbjct: 881  KLEPRAIKCIFLGYPSGVKGYKLWCPETK--KVVISRNVVFHESVMLHDKPSTNVPVESQ 938

Query: 1010 QVKNVQIEVETHKFKHL---GVDPSVRPQQINVEETAPESPQQ---QQQPDLNEPKNPSL 849
            +  +VQ+E       HL   G  P      IN +E   E       QQ P  +       
Sbjct: 939  EKASVQVE-------HLISSGHAPEKEDVAINQDEPVIEDSNSSIVQQSPKRS------- 984

Query: 848  GEAHEAQVDLQDYQLARDRERREVRPNLRY-SSLNLIEYALASGE 717
                          +A+DR +R ++P  RY    N++ YAL+  E
Sbjct: 985  --------------IAKDRPKRNIKPPQRYIEEANIVAYALSVAE 1015


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
            copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  254 bits (648), Expect(2) = e-120
 Identities = 125/227 (55%), Positives = 165/227 (72%)
 Frame = -2

Query: 684  AMKEEMDSLIKNETWKLVNKSESQRVVKCKWLYKIKDGVSPHDPPRYKARLVARGFTQLE 505
            AM +EM+SL KN+TW LV +   ++++ CKW++K K+G+SP +  +YKAR+VARGF Q E
Sbjct: 809  AMGDEMESLHKNQTWDLVIQPSGRKIITCKWVFKKKEGISPAEGVKYKARVVARGFNQRE 868

Query: 504  GVDYNEAFSPVVKYKTIRVILALVAQFNWELEQLDVKYAFLHGELEEVIYMAQPQGFEVK 325
            GVDYNE FSPVV++ +IRV+LA+VA  N ELEQLDVK AFLHGELEE IYM QP GF+V 
Sbjct: 869  GVDYNEIFSPVVRHTSIRVLLAIVAHQNLELEQLDVKTAFLHGELEEEIYMTQPDGFQVP 928

Query: 324  GRFEKVCLLKKSLYGLKQSPRQWYKRFDNYVLTVKFQRSAYDHCLYFKKDKDDFVTXXXX 145
            G+   VC LKKSLYGLKQSPRQWYKRFD+Y++ + + RS+YD C+Y+ +  DD       
Sbjct: 929  GKENHVCKLKKSLYGLKQSPRQWYKRFDSYMVKLGYTRSSYDCCVYYNRLNDDSF-IYLV 987

Query: 144  XXXXXXXXIGSNMHNINEIKMFLCSEFDMKDLGHAKRILGMDIERKR 4
                         ++I ++K  L +EF+MKDLG A++ILGM+I R R
Sbjct: 988  LYVDDMLIAAKKKYDIQKLKGLLSAEFEMKDLGAARKILGMEIIRDR 1034



 Score =  206 bits (524), Expect(2) = e-120
 Identities = 125/284 (44%), Positives = 174/284 (61%), Gaps = 2/284 (0%)
 Frame = -3

Query: 1547 KVKTLRTDNGLEFCNLEFDSFCVEKGIQRHRTVRHTPQQNGVAERLNRTIMDKVKCMVIS 1368
            K+K LRTDNGLEFC  EFD FC ++GI RHRTVR+TPQQNGVAER+N+T++++ +CM+ +
Sbjct: 532  KIKRLRTDNGLEFCWSEFDQFCKDEGIARHRTVRNTPQQNGVAERMNQTLLERARCMLSN 591

Query: 1367 YGLAKGF*REASCTAVYLINRSPSSAINFKTPEELWSGKPPKLSHLRVFGCSAYAHQIEG 1188
             GL + F  EA  TA YLINR P + I  KTP E+WSGK    S+L+ FGC+AY H  EG
Sbjct: 592  AGLDRRFWAEAVSTACYLINRGPHTGIQCKTPMEMWSGKAADYSNLKAFGCTAYYHVSEG 651

Query: 1187 KLEARAVKCVLLGYPTGVKGYRL*VLGEKCIKIINSRDVVFNEMEMPCLKTESEPKEQPQ 1008
            KLE RA K V +GY  GVKG+R+    EK  ++I SR+VVF+  E P L+T  +P    +
Sbjct: 652  KLEPRAKKGVFVGYGDGVKGFRIWSPAEK--RVIMSRNVVFD--ESPLLRTIVKPTTTSE 707

Query: 1007 VKNVQIEVETHKFKHLGVDPSVRPQQINVEETAPESPQQQQQPDLNEPKNPSLGEAHEAQ 828
              ++  +VE            V   + +++E   E  + Q + D+ E   PS  + H++ 
Sbjct: 708  TGSLDKQVEF----------QVIQNESDLKEPEEEDQEPQTETDIPE-SMPS--DIHQS- 753

Query: 827  VDLQDYQLARDRERR-EVRPNLRYSSLNLIEYAL-ASGEAENSE 702
                   +A+DR RR  VRP  RY   +++ YAL  + E + SE
Sbjct: 754  -------IAQDRPRRVGVRPPTRYGFEDMVGYALQVAEEVDTSE 790


>gb|AAK38381.1|AC079028_5 polyprotein, putative [Arabidopsis thaliana]
          Length = 855

 Score =  243 bits (621), Expect(2) = e-119
 Identities = 122/232 (52%), Positives = 162/232 (69%)
 Frame = -2

Query: 699  INYKEAMKEEMDSLIKNETWKLVNKSESQRVVKCKWLYKIKDGVSPHDPPRYKARLVARG 520
            + +K A  EEMDSLIKN TW LV+K  +++++ C+WL+K+K G+   +P R+KARLVA+G
Sbjct: 530  LKWKNATHEEMDSLIKNGTWDLVDKPTNRKIIGCRWLFKLKSGIPGVEPVRFKARLVAKG 589

Query: 519  FTQLEGVDYNEAFSPVVKYKTIRVILALVAQFNWELEQLDVKYAFLHGELEEVIYMAQPQ 340
            +TQ EGVDY E F+PVVK+ +IRV++++V   + ELEQ+DVK AFLHG+LEE +YM QP+
Sbjct: 590  YTQREGVDYQEIFAPVVKHTSIRVLMSVVVDQDMELEQMDVKTAFLHGDLEEELYMEQPE 649

Query: 339  GFEVKGRFEKVCLLKKSLYGLKQSPRQWYKRFDNYVLTVKFQRSAYDHCLYFKKDKDDFV 160
            GF      +KVCLLKKSLYGLKQSPRQW KRF  +++  KF RSA+D C+Y K+ +  FV
Sbjct: 650  GFITDKTKDKVCLLKKSLYGLKQSPRQWNKRFGRFMMEQKFIRSAHDACVYVKQVEQGFV 709

Query: 159  TXXXXXXXXXXXXIGSNMHNINEIKMFLCSEFDMKDLGHAKRILGMDIERKR 4
                          G +   +N IK  L  EF+MKD+G A RILG DI R R
Sbjct: 710  --YLLLYVDDMLIAGKSKAEVNMIKEQLSVEFEMKDMGPASRILGKDITRDR 759



 Score =  214 bits (546), Expect(2) = e-119
 Identities = 112/282 (39%), Positives = 179/282 (63%)
 Frame = -3

Query: 1547 KVKTLRTDNGLEFCNLEFDSFCVEKGIQRHRTVRHTPQQNGVAERLNRTIMDKVKCMVIS 1368
            +VK LRTDNGLEFCN++FDS+C + GI+RH+T  +TPQQNGVAER+NRT+M+KV+C++  
Sbjct: 242  RVKCLRTDNGLEFCNIKFDSYCKKYGIERHKTCTYTPQQNGVAERMNRTVMEKVRCLLNE 301

Query: 1367 YGLAKGF*REASCTAVYLINRSPSSAINFKTPEELWSGKPPKLSHLRVFGCSAYAHQIEG 1188
             GL + F  E + TAVY+INRSPS+AI+   PEELW  + P   HLR     AY H  +G
Sbjct: 302  SGLEEEFWAEVATTAVYIINRSPSAAIDHNVPEELWLNRKPGYKHLRRLRAVAYVHVDQG 361

Query: 1187 KLEARAVKCVLLGYPTGVKGYRL*VLGEKCIKIINSRDVVFNEMEMPCLKTESEPKEQPQ 1008
            KL+ RA+K + +GYP+G KGY++ +L E+  K + SR+V+F E  +   K  ++ +   +
Sbjct: 362  KLKPRAIKGIFIGYPSGTKGYKVWLLEEQ--KCVISRNVIFQEEVV--YKDLNDKETVVK 417

Query: 1007 VKNVQIEVETHKFKHLGVDPSVRPQQINVEETAPESPQQQQQPDLNEPKNPSLGEAHEAQ 828
             ++++ + + H       + S +    ++EE        +Q+P+     +P++    E++
Sbjct: 418  KEDIRTQTDNHLVISKTKEVSDQGGVTHIEECEESDENDEQEPETVNETDPTV----ESE 473

Query: 827  VDLQDYQLARDRERREVRPNLRYSSLNLIEYALASGEAENSE 702
              L +YQLA+DR RR++ P  R++  + + +AL   E+ + E
Sbjct: 474  GSLANYQLAKDRVRRQINPPARFTEESGVAFALVVVESLSLE 515


>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
          Length = 1643

 Score =  231 bits (588), Expect(2) = e-119
 Identities = 122/228 (53%), Positives = 155/228 (67%), Gaps = 1/228 (0%)
 Frame = -2

Query: 684  AMKEEMDSLIKNETWKLVNKSESQRVVKCKWLYKIKDGVSPHDPPRYKARLVARGFTQLE 505
            +M +EM SL KN+TW+LV   E  + V CKWL+KIKDG+S  +PP+YK+RLVA+      
Sbjct: 1145 SMDDEMASLRKNQTWELVPLPEGVKPVDCKWLFKIKDGISEDEPPKYKSRLVAK------ 1198

Query: 504  GVDYNEAFSPVVKYKTIRVILALVAQFNWELEQLDVKYAFLHGELEEVIYMAQPQGFEVK 325
                   FSPVVK+K+IRV+LA+V+ FN EL+QLDVK AFLHG LEE IYM QP+GF   
Sbjct: 1199 ------VFSPVVKHKSIRVLLAMVSVFNLELDQLDVKTAFLHGNLEEEIYMKQPEGFVDS 1252

Query: 324  GRFEKVCLLKKSLYGLKQSPRQWYKRFDNYVLTVKFQRSAYDHCLYFKKDKD-DFVTXXX 148
             + + VC LKKSLYGLKQSPRQWYKRFD ++++ +F R+ YD C+YFK   D  F+    
Sbjct: 1253 EKSDHVCFLKKSLYGLKQSPRQWYKRFDAFMVSHEFMRNQYDSCVYFKTLPDGSFI--YL 1310

Query: 147  XXXXXXXXXIGSNMHNINEIKMFLCSEFDMKDLGHAKRILGMDIERKR 4
                        N   IN++K  L SEF+MKDLG AK+ILGM+I R R
Sbjct: 1311 LLYVDDMLIAAKNRAEINKLKQLLSSEFEMKDLGAAKKILGMEIWRDR 1358



 Score =  226 bits (576), Expect(2) = e-119
 Identities = 131/289 (45%), Positives = 171/289 (59%), Gaps = 13/289 (4%)
 Frame = -3

Query: 1544 VKTLRTDNGLEFCNLEFDSFCVEKGIQRHRTVRHTPQQNGVAERLNRTIMDKVKCMVISY 1365
            VKTLRTDNGLEFCN +FD FC ++GI RHRTVRHTPQQNGVAER+N+T++ + +CM I  
Sbjct: 867  VKTLRTDNGLEFCNKDFDEFCRKEGIVRHRTVRHTPQQNGVAERMNQTLVQRARCMRIDA 926

Query: 1364 GLAKGF*REASCTAVYLINRSPSSAINFKTPEELWSGKPPKLSHLRVFGCSAYAHQIEGK 1185
            GL+K F  EA  TA YL+NRSPS+AI+FKTP+E+WSGKP   S L++FGC AYAH  +GK
Sbjct: 927  GLSKKFWAEAVNTAAYLVNRSPSTAIDFKTPQEVWSGKPSNYSGLKIFGCPAYAHVSDGK 986

Query: 1184 LEARAVKCVLLGYPTGVKGYRL*VLGEKCIKIINSRDVVFNEMEMPCLKTE------SEP 1023
            LE RA+KC+ LGY TGVKGYRL    ++  K I SRDV F+E  M   + E      +  
Sbjct: 987  LEPRAMKCIFLGYATGVKGYRLWCTEDRTPKFIISRDVTFDESAMFGQRKEFGDLAGTSK 1046

Query: 1022 KEQPQVKNVQIEVETHKFKHLGVDPSVRPQQINVEETAPESPQQQQQPDLNEPKNPSLGE 843
             +    + V+ EV+              P +  V++T+ E P                  
Sbjct: 1047 TDLGANQKVEFEVDA-------------PMENGVDDTSEEQP------------------ 1075

Query: 842  AHEAQVDLQDYQ-LARDRERREVRPNLRY------SSLNLIEYALASGE 717
                 +D  D Q +A  R RRE+R  +RY      +  N + +ALA  E
Sbjct: 1076 ----VIDQNDSQSIAAXRPRREIRRPMRYVDCVSANITNPVAFALAVAE 1120


>dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsis thaliana]
          Length = 1342

 Score =  245 bits (625), Expect(2) = e-118
 Identities = 121/230 (52%), Positives = 164/230 (71%)
 Frame = -2

Query: 693  YKEAMKEEMDSLIKNETWKLVNKSESQRVVKCKWLYKIKDGVSPHDPPRYKARLVARGFT 514
            +K+A  EEMDS+ KN+TW +++K E +RV+ CKW++K K G+   +PPRYKARLVA+GF+
Sbjct: 838  WKQATIEEMDSMKKNDTWDVIDKPEGKRVIGCKWIFKRKAGIPGVEPPRYKARLVAKGFS 897

Query: 513  QLEGVDYNEAFSPVVKYKTIRVILALVAQFNWELEQLDVKYAFLHGELEEVIYMAQPQGF 334
            Q EG+DY E FSPVVK+ +IR +L++V QF+ ELEQLDVK AFLHG L+E I M+QP+G+
Sbjct: 898  QREGIDYQEIFSPVVKHVSIRYLLSIVVQFDMELEQLDVKTAFLHGNLDEYILMSQPEGY 957

Query: 333  EVKGRFEKVCLLKKSLYGLKQSPRQWYKRFDNYVLTVKFQRSAYDHCLYFKKDKDDFVTX 154
            E +   EKVCLLKKSLYGLKQSPRQW +RFD++++   +QRS Y+ C+Y  +  +D    
Sbjct: 958  EDEDSTEKVCLLKKSLYGLKQSPRQWNQRFDSFMINSGYQRSKYNPCVY-TQQLNDGSYI 1016

Query: 153  XXXXXXXXXXXIGSNMHNINEIKMFLCSEFDMKDLGHAKRILGMDIERKR 4
                          N   I ++K  L  EF+MKDLG A++ILGM+I R R
Sbjct: 1017 YLLLYVDDMLIASQNKDQIQKLKESLNREFEMKDLGPARKILGMEITRNR 1066



 Score =  211 bits (538), Expect(2) = e-118
 Identities = 122/279 (43%), Positives = 170/279 (60%), Gaps = 2/279 (0%)
 Frame = -3

Query: 1547 KVKTLRTDNGLEFCNLEFDSFCVEKGIQRHRTVRHTPQQNGVAERLNRTIMDKVKCMVIS 1368
            K+K L TDNGLEFCN EFDSFC ++G+ RHRT  +TPQQNGVAER+NRTIM+KV+CM+  
Sbjct: 547  KLKILITDNGLEFCNQEFDSFCRKEGVIRHRTCAYTPQQNGVAERMNRTIMNKVRCMLSE 606

Query: 1367 YGLAKGF*REASCTAVYLINRSPSSAINFKTPEELWSGKPPKLSHLRVFGCSAYAHQIEG 1188
             GL K F  EA+ TAV+LIN+SPSS+I F  PEE W+G PP    L+ FG  AY H  +G
Sbjct: 607  SGLGKQFWAEAASTAVFLINKSPSSSIEFDIPEEKWTGHPPDYKILKKFGSVAYIHSDQG 666

Query: 1187 KLEARAVKCVLLGYPTGVKGYRL*VLGEKCIKIINSRDVVFNEMEMPCLKTESEPKEQPQ 1008
            KL  RA K + LGYP GVK +++ +L ++  K + SRD+VF E +M     +++  E+ +
Sbjct: 667  KLNPRAKKGIFLGYPDGVKRFKVWLLEDR--KCVVSRDIVFQENQMYKELQKNDMSEEDK 724

Query: 1007 VKNVQIEVETHKFKHLGVDPSVRPQQINVEETAPESPQQQQQPDLNEPKNPSLGEAHEAQ 828
             +  ++E    + K+L  D        N  E    S Q+Q     +  K+  + E     
Sbjct: 725  -QLTEVERTLIELKNLSADDE------NQSEGGDNSNQEQASTTRSASKDKQVEETDSDD 777

Query: 827  VDLQDYQLARDRERREVRPNLRY--SSLNLIEYALASGE 717
              L++Y LARDR RR++R   R+     +L+ +AL   E
Sbjct: 778  DCLENYLLARDRIRRQIRAPQRFVEEDDSLVGFALTMTE 816


>emb|CAA31653.1| polyprotein [Arabidopsis thaliana]
          Length = 1291

 Score =  229 bits (583), Expect(2) = e-117
 Identities = 133/290 (45%), Positives = 183/290 (63%), Gaps = 8/290 (2%)
 Frame = -3

Query: 1547 KVKTLRTDNGLEFCNLEFDSFCVEKGIQRHRTVRHTPQQNGVAERLNRTIMDKVKCMVIS 1368
            KVK LRTDNGLEFCNL+FD++C E GI+RH+T  +TPQQNGVAER+NRTIM+KV+CM+  
Sbjct: 569  KVKCLRTDNGLEFCNLKFDAYCKEHGIERHKTCTYTPQQNGVAERMNRTIMEKVRCMLNE 628

Query: 1367 YGLAKGF*REASCTAVYLINRSPSSAINFKTPEELWSGKPPKLSHLRVFGCSAYAHQIEG 1188
             GL + F  EA+ TA YLINRSP+SAI+   PEELW  K P   HLR FG  AY H  +G
Sbjct: 629  SGLGEEFWAEAAATAAYLINRSPASAIDHNVPEELWLNKKPGYKHLRRFGSIAYVHIDQG 688

Query: 1187 KLEARAVKCVLLGYPTGVKGYRL*VLGEKCIKIINSRDVVFNEMEM--PCLK----TESE 1026
            KL+ RA+K + +GYP G KGY++ +L E   K + SR+V+F+E  +    +K     ESE
Sbjct: 689  KLKPRALKGIFIGYPAGTKGYKIWLLEEH--KCVISRNVLFHEESVYKDTMKKERVVESE 746

Query: 1025 PKEQPQVKNVQIEVETHKFKHLGVDPSVRPQQINVEETAPESPQQQQQPDLNEPKNPSLG 846
             +     K+  I+V+T      G   S    Q++ EE + ES +++Q+P+          
Sbjct: 747  AEPASHSKSTLIKVKTP-----GNLNSGEVIQVSDEEESDESVEEEQEPETQV------- 794

Query: 845  EAHEAQV--DLQDYQLARDRERREVRPNLRYSSLNLIEYALASGEAENSE 702
            E  E Q    L +YQLARDRERR++ P  R++  + + +AL + E  + E
Sbjct: 795  ELPETQTTSSLANYQLARDRERRQIHPPARFTEESGVAFALVTVETLSME 844



 Score =  224 bits (570), Expect(2) = e-117
 Identities = 114/228 (50%), Positives = 156/228 (68%)
 Frame = -2

Query: 693  YKEAMKEEMDSLIKNETWKLVNKSESQRVVKCKWLYKIKDGVSPHDPPRYKARLVARGFT 514
            +K A  EEMDSLIKN TW LV+K ++++++ C+WL+K+K G    +P RYKA+LVA+G+T
Sbjct: 861  WKLATHEEMDSLIKNGTWVLVDKPQNRKIIGCRWLFKLKSGSPGVEPVRYKAQLVAKGYT 920

Query: 513  QLEGVDYNEAFSPVVKYKTIRVILALVAQFNWELEQLDVKYAFLHGELEEVIYMAQPQGF 334
              EGVDY E F+ VVK+ +IR+++++V   + ELEQ+DVK AFLHGELEE +YM QP+G 
Sbjct: 921  HREGVDYQEIFALVVKHTSIRILMSVVVDQDLELEQMDVKTAFLHGELEEELYMEQPEGC 980

Query: 333  EVKGRFEKVCLLKKSLYGLKQSPRQWYKRFDNYVLTVKFQRSAYDHCLYFKKDKDDFVTX 154
              +    KVCLLKKSLYGLKQSPRQW KRF+ +++   F RS +D C+Y K+  +     
Sbjct: 981  ISEDGENKVCLLKKSLYGLKQSPRQWNKRFNRFMIDQNFIRSEHDACVYVKQVSEQ-EHL 1039

Query: 153  XXXXXXXXXXXIGSNMHNINEIKMFLCSEFDMKDLGHAKRILGMDIER 10
                        G +   IN++K  L  EF+MKD+G A RILG+DI R
Sbjct: 1040 YLLLYVDDMLIAGKSKSEINKVKEQLSMEFEMKDMGPASRILGIDIIR 1087


>emb|CAA20201.1| putative transposable element [Arabidopsis thaliana]
            gi|7268932|emb|CAB79135.1| putative transposable element
            [Arabidopsis thaliana]
          Length = 1308

 Score =  233 bits (593), Expect(2) = e-117
 Identities = 114/233 (48%), Positives = 164/233 (70%), Gaps = 1/233 (0%)
 Frame = -2

Query: 699  INYKEAMKEEMDSLIKNETWKLVNKSESQRVVKCKWLYKIKDGVSPHDPPRYKARLVARG 520
            I +   MKEE+DSL+KN TW +V   + Q+V+ C+WL+K+K G+   +  RYKARLVARG
Sbjct: 833  IKWNGGMKEEIDSLLKNGTWDIVEWPKEQKVISCRWLFKLKPGIPGVEAQRYKARLVARG 892

Query: 519  FTQLEGVDYNEAFSPVVKYKTIRVILALVAQFNWELEQLDVKYAFLHGELEEVIYMAQPQ 340
            FTQ +G+DY E F+PVVK+ +IR++++ V + + ELEQ+DVK  FLHGEL++V+YM QP+
Sbjct: 893  FTQQKGIDYEEVFAPVVKHISIRILMSAVVKDDMELEQMDVKTTFLHGELDQVLYMEQPE 952

Query: 339  GFEVKGRFEKVCLLKKSLYGLKQSPRQWYKRFDNYVLTVKFQRSAYDHCLYFKK-DKDDF 163
            GFEV    ++VCLLKKSLYGLKQ+PRQW K+F  ++L+++F RS +D C+Y K+ +  +F
Sbjct: 953  GFEVNPEKDQVCLLKKSLYGLKQAPRQWNKKFHAFMLSLQFARSEHDSCVYVKEVNPGEF 1012

Query: 162  VTXXXXXXXXXXXXIGSNMHNINEIKMFLCSEFDMKDLGHAKRILGMDIERKR 4
            V                +   I+++K  L  +F+MKD+G A RILG+DI R R
Sbjct: 1013 V--YLLLYVDDMLLAAKSKSEISKLKEALSLKFEMKDMGAASRILGIDIIRNR 1063



 Score =  220 bits (560), Expect(2) = e-117
 Identities = 129/291 (44%), Positives = 171/291 (58%), Gaps = 9/291 (3%)
 Frame = -3

Query: 1547 KVKTLRTDNGLEFCNLEFDSFCVEKGIQRHRTVRHTPQQNGVAERLNRTIMDKVKCMVIS 1368
            KVK LRTDNGLEFCNL+FD FC + GI+RHRT  +TPQQNGVA+R+NRT+M+KV+C++  
Sbjct: 550  KVKILRTDNGLEFCNLKFDEFCKQNGIERHRTCTYTPQQNGVAKRMNRTLMEKVRCLLNE 609

Query: 1367 YGLAKGF*REASCTAVYLINRSPSSAINFKTPEELWSGKPPKLSHLRVFGCSAYAHQIEG 1188
             GL + F  EA+ TA YL+NRSP+SA++   PEELW  K P   HLR FGC AY H  +G
Sbjct: 610  SGLEEVFWAEAAATAAYLVNRSPASAVDHNVPEELWLDKKPGYKHLRRFGCIAYVHLDQG 669

Query: 1187 KLEARAVKCVLLGYPTGVKGYRL*VLGEKCIKIINSRDVVFNEMEMPCLKTESEPKEQPQ 1008
            KL+ RA+K V LGYP G KGY++ +L E+  K + SR++VFNE ++   K   E  EQ  
Sbjct: 670  KLKPRALKGVFLGYPQGTKGYKVWLLDEE--KCVISRNIVFNENQV--YKDIRESSEQ-S 724

Query: 1007 VKNV---------QIEVETHKFKHLGVDPSVRPQQINVEETAPESPQQQQQPDLNEPKNP 855
            VK++         Q+ V+ H           +   + +EE   ES          + +N 
Sbjct: 725  VKDISDLEGYNEFQVSVKEH-------GECSKTGGVTIEEIDQES----------DSENS 767

Query: 854  SLGEAHEAQVDLQDYQLARDRERREVRPNLRYSSLNLIEYALASGEAENSE 702
               E   A +DL +YQ ARDRERR   P  + +       AL   E   SE
Sbjct: 768  VTQEPLIASIDLSNYQSARDRERRAPNPPQKLADYTHFALALVMAEEIESE 818


>gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Arabidopsis thaliana]
          Length = 1356

 Score =  233 bits (594), Expect(2) = e-117
 Identities = 116/228 (50%), Positives = 159/228 (69%), Gaps = 1/228 (0%)
 Frame = -2

Query: 684  AMKEEMDSLIKNETWKLVNKSESQRVVKCKWLYKIKDGVSPHDPPRYKARLVARGFTQLE 505
            A  +EMDSL+KN TW LV+K + ++++ C+WL+K+K G+   +P R+KARLVA+G+TQ E
Sbjct: 857  ATHDEMDSLMKNGTWDLVDKPKDRKIIGCRWLFKLKSGIPGVEPTRFKARLVAKGYTQRE 916

Query: 504  GVDYNEAFSPVVKYKTIRVILALVAQFNWELEQLDVKYAFLHGELEEVIYMAQPQGFEVK 325
            GVDY E F+PVVK+ +IR++++LV   + ELEQ+DVK  FLHG+LEE +YM QP+GF   
Sbjct: 917  GVDYQEIFAPVVKHVSIRILMSLVVDKDLELEQMDVKTTFLHGDLEEELYMEQPEGFVSD 976

Query: 324  GRFEKVCLLKKSLYGLKQSPRQWYKRFDNYVLTVKFQRSAYDHCLYFKK-DKDDFVTXXX 148
                KVC LKKSLYGLKQSPRQW KRFD ++ + +F RS +D C+Y K   + DF+    
Sbjct: 977  SSENKVCRLKKSLYGLKQSPRQWNKRFDRFMSSQQFIRSEHDACVYVKHVSEHDFI--YL 1034

Query: 147  XXXXXXXXXIGSNMHNINEIKMFLCSEFDMKDLGHAKRILGMDIERKR 4
                      G++   IN +K  L +EF+MKD+G A RILG+DI R R
Sbjct: 1035 LLYVDDMLIAGASKAEINRVKEQLSTEFEMKDMGGASRILGIDIYRDR 1082



 Score =  218 bits (554), Expect(2) = e-117
 Identities = 122/275 (44%), Positives = 163/275 (59%), Gaps = 2/275 (0%)
 Frame = -3

Query: 1547 KVKTLRTDNGLEFCNLEFDSFCVEKGIQRHRTVRHTPQQNGVAERLNRTIMDKVKCMVIS 1368
            KVK LRTDNGLEFCN  FDS+C E GI+RHRT  +TPQQNGVAER+NRTIM+KV+C++  
Sbjct: 559  KVKCLRTDNGLEFCNSRFDSYCKEHGIERHRTCTYTPQQNGVAERMNRTIMEKVRCLLNK 618

Query: 1367 YGLAKGF*REASCTAVYLINRSPSSAINFKTPEELWSGKPPKLSHLRVFGCSAYAHQIEG 1188
             G+ + F  EA+ TA YLINRSP+SAIN   PEE+W  + P   HLR FG  AY HQ +G
Sbjct: 619  SGVEEVFWAEAAATAAYLINRSPASAINHNVPEEMWLNRKPGYKHLRKFGSIAYVHQDQG 678

Query: 1187 KLEARAVKCVLLGYPTGVKGYRL*VLGEKCIKIINSRDVVFNE--MEMPCLKTESEPKEQ 1014
            KL+ RA+K   LGYP G KGY++ +L E+  K + SR+VVF E  +       E +    
Sbjct: 679  KLKPRALKGFFLGYPAGTKGYKVWLLEEE--KCVISRNVVFQESVVYRDLKVKEDDTDNL 736

Query: 1013 PQVKNVQIEVETHKFKHLGVDPSVRPQQINVEETAPESPQQQQQPDLNEPKNPSLGEAHE 834
             Q +    EVE +KF        V   Q    ++ P +  +Q      E +     +   
Sbjct: 737  NQKETTSSEVEQNKFAEASGSGGVIQLQ---SDSEPITEGEQSSDSEEEVEYSEKTQETP 793

Query: 833  AQVDLQDYQLARDRERREVRPNLRYSSLNLIEYAL 729
             +  L  Y+LARDR RR + P  R++  + + +AL
Sbjct: 794  KRTGLTTYKLARDRVRRNINPPTRFTEESSVTFAL 828


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  247 bits (630), Expect(2) = e-117
 Identities = 121/227 (53%), Positives = 164/227 (72%)
 Frame = -2

Query: 684  AMKEEMDSLIKNETWKLVNKSESQRVVKCKWLYKIKDGVSPHDPPRYKARLVARGFTQLE 505
            AM +EM+SL KN +W+L    + ++ ++CKW++K K+G+SP D  RYKARLVA+G++Q+ 
Sbjct: 743  AMHDEMESLEKNHSWELEKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIP 802

Query: 504  GVDYNEAFSPVVKYKTIRVILALVAQFNWELEQLDVKYAFLHGELEEVIYMAQPQGFEVK 325
            G+D+N+ FSPVVK+ +IR +L++VA  ++ELEQ+DVK AFLHGELEE IYM QP+GF V 
Sbjct: 803  GIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVP 862

Query: 324  GRFEKVCLLKKSLYGLKQSPRQWYKRFDNYVLTVKFQRSAYDHCLYFKKDKDDFVTXXXX 145
            G+   VC LKKSLYGLKQSPRQWYKRFD+++L+ KF+RS YD C+Y K    D       
Sbjct: 863  GKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYLK--VVDGSAIYLL 920

Query: 144  XXXXXXXXIGSNMHNINEIKMFLCSEFDMKDLGHAKRILGMDIERKR 4
                       +   I ++K  L SEF+MKDLG AK+ILGM+I R+R
Sbjct: 921  LYVDDMLIAAKDKSEIAKLKAQLSSEFEMKDLGAAKKILGMEITRER 967



 Score =  203 bits (517), Expect(2) = e-117
 Identities = 123/280 (43%), Positives = 159/280 (56%), Gaps = 3/280 (1%)
 Frame = -3

Query: 1547 KVKTLRTDNGLEFCNLEFDSFCVEKGIQRHRTVRHTPQQNGVAERLNRTIMDKVKCMVIS 1368
            KVK LRTDNG+E C+  F S+C  +GI RH TV HTPQQNGVAER+NRTI+ K +CM+ +
Sbjct: 463  KVKILRTDNGMELCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRTIISKARCMLSN 522

Query: 1367 YGLAKGF*REASCTAVYLINRSPSSAINFKTPEELWSGKPPKLSHLRVFGCSAYAHQIEG 1188
              L K F  EA  TA YLINRSPS AI+ KTP E+WSG P   S LRVFGC+AYAH   G
Sbjct: 523  ASLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSPANYSDLRVFGCTAYAHVDNG 582

Query: 1187 KLEARAVKCVLLGYPTGVKGYRL*VLGEKCIKIINSRDVVFNEMEMPCLKTESE-PKEQP 1011
            KLE R +KC+ LGY +GVKGY+L     K  K++ SR+VVF+E  M   K  +  P E  
Sbjct: 583  KLEPRVIKCIFLGYLSGVKGYKLWCPETK--KVVISRNVVFHESIMLHDKPSTNVPVESQ 640

Query: 1010 QVKNVQIEVETHKFKHL-GVDPSVRPQQINVEETAPESPQQQQQPDLNEPKNPSLGEAHE 834
            +  +VQ+E       HL     +   + + + + AP             PK         
Sbjct: 641  EKVSVQVE-------HLISSGHAPEKEDVAINQDAPVIEDSDSSIVQQSPKR-------- 685

Query: 833  AQVDLQDYQLARDRERREVRPNLRY-SSLNLIEYALASGE 717
                     +A+DR +R  +P  RY    N++ YAL+  E
Sbjct: 686  --------SIAKDRPKRNTKPPRRYIEEANIVAYALSVAE 717


>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1312

 Score =  246 bits (627), Expect(2) = e-116
 Identities = 120/227 (52%), Positives = 162/227 (71%)
 Frame = -2

Query: 684  AMKEEMDSLIKNETWKLVNKSESQRVVKCKWLYKIKDGVSPHDPPRYKARLVARGFTQLE 505
            AM +EM+SL KN TW+ V   + ++ ++CKW++K K+G+SP D  RYKARLVA+G++Q+ 
Sbjct: 869  AMHDEMESLKKNHTWEFVKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIP 928

Query: 504  GVDYNEAFSPVVKYKTIRVILALVAQFNWELEQLDVKYAFLHGELEEVIYMAQPQGFEVK 325
            G+D+N+ FSP++K+ +IR +L +VA  ++ELEQ+DVK AFLHGELEE IYM QP+GF V 
Sbjct: 929  GIDFNDVFSPIMKHSSIRTLLGIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVL 988

Query: 324  GRFEKVCLLKKSLYGLKQSPRQWYKRFDNYVLTVKFQRSAYDHCLYFKKDKDDFVTXXXX 145
            G+   VC LKKSLYGLKQSPRQWYKRFD+++L+ KF+RS YD C+Y K    D       
Sbjct: 989  GKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYLK--VVDGSAIYLL 1046

Query: 144  XXXXXXXXIGSNMHNINEIKMFLCSEFDMKDLGHAKRILGMDIERKR 4
                       +   I ++K  L SEF MKDLG AK+ILGM+I R+R
Sbjct: 1047 LYVDDMLIAAKDKSEIAKLKAQLSSEFGMKDLGAAKKILGMEITRER 1093



 Score =  201 bits (511), Expect(2) = e-116
 Identities = 120/279 (43%), Positives = 164/279 (58%), Gaps = 2/279 (0%)
 Frame = -3

Query: 1547 KVKTLRTDNGLEFCNLEFDSFCVEKGIQRHRTVRHTPQQNGVAERLNRTIMDKVKCMVIS 1368
            KVK LRTDNG+EFC+  F S+C  +GI  H TV HTPQQNGVAER+N  I+ K +CM+ +
Sbjct: 589  KVKILRTDNGMEFCSKIFKSYCKSEGIVHHYTVPHTPQQNGVAERMNMAIISKARCMLSN 648

Query: 1367 YGLAKGF*REASCTAVYLINRSPSSAINFKTPEELWSGKPPKLSHLRVFGCSAYAHQIEG 1188
              L K F  EA  T  YLINRSPS A + KTP E+WSG P   S LRVFGC+AYAH   G
Sbjct: 649  ADLPKQFWAEAVSTTCYLINRSPSYATDKKTPIEVWSGSPANYSDLRVFGCTAYAHVDNG 708

Query: 1187 KLEARAVKCVLLGYPTGVKGYRL*VLGEKCIKIINSRDVVFNEMEMPCLKTESE-PKEQP 1011
            KLE RA+KC+ LGYP+GVKGY+L     K  K++ SR+VVF+E  +   K  +  P E  
Sbjct: 709  KLEPRAIKCIFLGYPSGVKGYKLWCPETK--KVVISRNVVFHESVILHDKPSTNVPVESQ 766

Query: 1010 QVKNVQIEVETHKFKHLGVDPSVRPQQINVEETAPESPQQQQQPDLNEPKNPSLGEAHEA 831
            +  +VQ+E       HL +     P++ NV          Q  P + +  +  + ++ + 
Sbjct: 767  EKASVQVE-------HL-ISSGHAPEKENV-------AINQDAPVIEDSDSSIVQQSSKR 811

Query: 830  QVDLQDYQLARDRERREVRPNLRY-SSLNLIEYALASGE 717
             +       A+D+ +R ++P  RY    N++ YAL+  E
Sbjct: 812  SI-------AKDKPKRNIKPPRRYIEEANIVAYALSVAE 843


>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1280

 Score =  246 bits (627), Expect(2) = e-116
 Identities = 120/227 (52%), Positives = 162/227 (71%)
 Frame = -2

Query: 684  AMKEEMDSLIKNETWKLVNKSESQRVVKCKWLYKIKDGVSPHDPPRYKARLVARGFTQLE 505
            AM +EM+SL KN TW+ V   + ++ ++CKW++K K+G+SP D  RYKARLVA+G++Q+ 
Sbjct: 869  AMHDEMESLKKNHTWEFVKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIP 928

Query: 504  GVDYNEAFSPVVKYKTIRVILALVAQFNWELEQLDVKYAFLHGELEEVIYMAQPQGFEVK 325
            G+D+N+ FSP++K+ +IR +L +VA  ++ELEQ+DVK AFLHGELEE IYM QP+GF V 
Sbjct: 929  GIDFNDVFSPIMKHSSIRTLLGIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVL 988

Query: 324  GRFEKVCLLKKSLYGLKQSPRQWYKRFDNYVLTVKFQRSAYDHCLYFKKDKDDFVTXXXX 145
            G+   VC LKKSLYGLKQSPRQWYKRFD+++L+ KF+RS YD C+Y K    D       
Sbjct: 989  GKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYLK--VVDGSAIYLL 1046

Query: 144  XXXXXXXXIGSNMHNINEIKMFLCSEFDMKDLGHAKRILGMDIERKR 4
                       +   I ++K  L SEF MKDLG AK+ILGM+I R+R
Sbjct: 1047 LYVDDMLIAAKDKSEIAKLKAQLSSEFGMKDLGAAKKILGMEITRER 1093



 Score =  201 bits (511), Expect(2) = e-116
 Identities = 120/279 (43%), Positives = 164/279 (58%), Gaps = 2/279 (0%)
 Frame = -3

Query: 1547 KVKTLRTDNGLEFCNLEFDSFCVEKGIQRHRTVRHTPQQNGVAERLNRTIMDKVKCMVIS 1368
            KVK LRTDNG+EFC+  F S+C  +GI  H TV HTPQQNGVAER+N  I+ K +CM+ +
Sbjct: 589  KVKILRTDNGMEFCSKIFKSYCKSEGIVHHYTVPHTPQQNGVAERMNMAIISKARCMLSN 648

Query: 1367 YGLAKGF*REASCTAVYLINRSPSSAINFKTPEELWSGKPPKLSHLRVFGCSAYAHQIEG 1188
              L K F  EA  T  YLINRSPS A + KTP E+WSG P   S LRVFGC+AYAH   G
Sbjct: 649  ADLPKQFWAEAVSTTCYLINRSPSYATDKKTPIEVWSGSPANYSDLRVFGCTAYAHVDNG 708

Query: 1187 KLEARAVKCVLLGYPTGVKGYRL*VLGEKCIKIINSRDVVFNEMEMPCLKTESE-PKEQP 1011
            KLE RA+KC+ LGYP+GVKGY+L     K  K++ SR+VVF+E  +   K  +  P E  
Sbjct: 709  KLEPRAIKCIFLGYPSGVKGYKLWCPETK--KVVISRNVVFHESVILHDKPSTNVPVESQ 766

Query: 1010 QVKNVQIEVETHKFKHLGVDPSVRPQQINVEETAPESPQQQQQPDLNEPKNPSLGEAHEA 831
            +  +VQ+E       HL +     P++ NV          Q  P + +  +  + ++ + 
Sbjct: 767  EKASVQVE-------HL-ISSGHAPEKENV-------AINQDAPVIEDSDSSIVQQSSKR 811

Query: 830  QVDLQDYQLARDRERREVRPNLRY-SSLNLIEYALASGE 717
             +       A+D+ +R ++P  RY    N++ YAL+  E
Sbjct: 812  SI-------AKDKPKRNIKPPRRYIEEANIVAYALSVAE 843


>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77549942|gb|ABA92739.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 1373

 Score =  248 bits (634), Expect(2) = e-115
 Identities = 124/231 (53%), Positives = 162/231 (70%)
 Frame = -2

Query: 696  NYKEAMKEEMDSLIKNETWKLVNKSESQRVVKCKWLYKIKDGVSPHDPPRYKARLVARGF 517
            N+  AM EEM SL KN TW++V   + ++ + CKW++K K+G+S  +PP+YKARLVARG+
Sbjct: 831  NWISAMHEEMQSLEKNSTWEVVPLPKKKKTISCKWIFKRKEGLSSSEPPKYKARLVARGY 890

Query: 516  TQLEGVDYNEAFSPVVKYKTIRVILALVAQFNWELEQLDVKYAFLHGELEEVIYMAQPQG 337
            +Q+ GVDYN+ FSPVVK+ +IR  L++VA  + ELEQLDVK AFLHGELEE IYM QP+G
Sbjct: 891  SQIPGVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGELEEDIYMDQPEG 950

Query: 336  FEVKGRFEKVCLLKKSLYGLKQSPRQWYKRFDNYVLTVKFQRSAYDHCLYFKKDKDDFVT 157
            F V G+ + VC LK+SLYGLKQSPRQW KRFD+++L+  F+RS YD C+Y K      + 
Sbjct: 951  FIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYDSCVYIKHVNGSPI- 1009

Query: 156  XXXXXXXXXXXXIGSNMHNINEIKMFLCSEFDMKDLGHAKRILGMDIERKR 4
                           +   I ++K  L SEFDMKDLG AK+ILGM+I R R
Sbjct: 1010 -YLLLYVDDMLIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILGMEISRDR 1059



 Score =  198 bits (503), Expect(2) = e-115
 Identities = 119/280 (42%), Positives = 165/280 (58%), Gaps = 3/280 (1%)
 Frame = -3

Query: 1547 KVKTLRTDNGLEFCNLEFDSFCVEKGIQRHRTVRHTPQQNGVAERLNRTIMDKVKCMVIS 1368
            KVK LRTDNG EFC+  F+ +C ++GI RH T+ HTPQQNGVAER+NRTI+ + +CM+  
Sbjct: 546  KVKLLRTDNGGEFCSHAFNDYCRQEGIVRHHTIPHTPQQNGVAERMNRTIISRARCMLSH 605

Query: 1367 YGLAKGF*REASCTAVYLINRSPSSAINFKTPEELWSGKPPKLSHLRVFGCSAYAHQIEG 1188
              + K F  EA+ TA YLINRSPS  +N KTP E+WSG P   S L+VFGC+AYAH   G
Sbjct: 606  ARMNKRFWAEAASTACYLINRSPSIPLNKKTPIEVWSGTPADYSQLKVFGCTAYAHVDNG 665

Query: 1187 KLEARAVKCVLLGYPTGVKGYRL*VLGEKCIKIINSRDVVFNEMEM--PCLKTESEPKEQ 1014
            KLE RAVKC+ LGY +GVKGY+L     +  K   SR VVFNE  M    L +E  P+++
Sbjct: 666  KLEPRAVKCLFLGYGSGVKGYKL--WNPETGKTFMSRSVVFNESVMFTNSLPSEHVPEKE 723

Query: 1013 PQVKNVQIEVETHKFKHLGVDPSVRPQQINVEETAPESPQQQQQPDLNEPKNPSLGEAHE 834
             Q  ++Q+E       H+  D  V+ + ++ ++            D  +   P L     
Sbjct: 724  LQRMHMQVE-------HVDDDTGVQVEPVHEQDDHNNDVADDDAHDDVQQTPPIL----- 771

Query: 833  AQVDLQDYQLARDRERREVRPNLR-YSSLNLIEYALASGE 717
             Q++ ++  +A+ + +R  +P  R     NL  YAL+  E
Sbjct: 772  -QLE-EELPIAQRKSKRTTKPPKRLIEECNLSYYALSCAE 809


>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score =  248 bits (634), Expect(2) = e-115
 Identities = 124/231 (53%), Positives = 162/231 (70%)
 Frame = -2

Query: 696  NYKEAMKEEMDSLIKNETWKLVNKSESQRVVKCKWLYKIKDGVSPHDPPRYKARLVARGF 517
            N+  AM EEM SL KN TW++V   + ++ + CKW++K K+G+S  +PP+YKARLVARG+
Sbjct: 831  NWISAMHEEMQSLEKNSTWEVVPLPKKKKTISCKWIFKRKEGLSSSEPPKYKARLVARGY 890

Query: 516  TQLEGVDYNEAFSPVVKYKTIRVILALVAQFNWELEQLDVKYAFLHGELEEVIYMAQPQG 337
            +Q+ GVDYN+ FSPVVK+ +IR  L++VA  + ELEQLDVK AFLHGELEE IYM QP+G
Sbjct: 891  SQIPGVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGELEEDIYMDQPEG 950

Query: 336  FEVKGRFEKVCLLKKSLYGLKQSPRQWYKRFDNYVLTVKFQRSAYDHCLYFKKDKDDFVT 157
            F V G+ + VC LK+SLYGLKQSPRQW KRFD+++L+  F+RS YD C+Y K      + 
Sbjct: 951  FIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYDSCVYIKHVNGSPI- 1009

Query: 156  XXXXXXXXXXXXIGSNMHNINEIKMFLCSEFDMKDLGHAKRILGMDIERKR 4
                           +   I ++K  L SEFDMKDLG AK+ILGM+I R R
Sbjct: 1010 -YLLLYVDDMLIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILGMEISRDR 1059



 Score =  198 bits (503), Expect(2) = e-115
 Identities = 119/280 (42%), Positives = 165/280 (58%), Gaps = 3/280 (1%)
 Frame = -3

Query: 1547 KVKTLRTDNGLEFCNLEFDSFCVEKGIQRHRTVRHTPQQNGVAERLNRTIMDKVKCMVIS 1368
            KVK LRTDNG EFC+  F+ +C ++GI RH T+ HTPQQNGVAER+NRTI+ + +CM+  
Sbjct: 546  KVKLLRTDNGGEFCSHAFNDYCRQEGIVRHHTIPHTPQQNGVAERMNRTIISRARCMLSH 605

Query: 1367 YGLAKGF*REASCTAVYLINRSPSSAINFKTPEELWSGKPPKLSHLRVFGCSAYAHQIEG 1188
              + K F  EA+ TA YLINRSPS  +N KTP E+WSG P   S L+VFGC+AYAH   G
Sbjct: 606  ARMNKRFWAEAASTACYLINRSPSIPLNKKTPIEVWSGMPADYSQLKVFGCTAYAHVDNG 665

Query: 1187 KLEARAVKCVLLGYPTGVKGYRL*VLGEKCIKIINSRDVVFNEMEM--PCLKTESEPKEQ 1014
            KLE RAVKC+ LGY +GVKGY+L     +  K   SR VVFNE  M    L +E  P+++
Sbjct: 666  KLEPRAVKCLFLGYGSGVKGYKL--WNPETGKTFMSRSVVFNESVMFTNSLPSEHVPEKE 723

Query: 1013 PQVKNVQIEVETHKFKHLGVDPSVRPQQINVEETAPESPQQQQQPDLNEPKNPSLGEAHE 834
             Q  ++Q+E       H+  D  V+ + ++ ++            D  +   P L     
Sbjct: 724  LQRMHMQVE-------HVDDDTGVQVEPVHEQDDHNNDVADDDAHDDVQQTPPIL----- 771

Query: 833  AQVDLQDYQLARDRERREVRPNLR-YSSLNLIEYALASGE 717
             Q++ ++  +A+ + +R  +P  R     NL  YAL+  E
Sbjct: 772  -QLE-EELPIAQRKSKRTTKPPKRLIEECNLSYYALSCAE 809


>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1243

 Score =  246 bits (628), Expect(2) = e-115
 Identities = 121/227 (53%), Positives = 163/227 (71%)
 Frame = -2

Query: 684  AMKEEMDSLIKNETWKLVNKSESQRVVKCKWLYKIKDGVSPHDPPRYKARLVARGFTQLE 505
            AM +EM+SL KN TW+LV   + ++ ++CKW++K K+G+SP D  RYKARLVA+G++Q+ 
Sbjct: 806  AMHDEMESLEKNHTWELVKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIP 865

Query: 504  GVDYNEAFSPVVKYKTIRVILALVAQFNWELEQLDVKYAFLHGELEEVIYMAQPQGFEVK 325
            G+D+N+ FSPVVK+ +IR +L +VA  ++ELEQ++VK AFLHGELEE IYM QP+GF V 
Sbjct: 866  GIDFNDVFSPVVKHSSIRTLLGIVAMHDYELEQMNVKTAFLHGELEEDIYMEQPEGFVVP 925

Query: 324  GRFEKVCLLKKSLYGLKQSPRQWYKRFDNYVLTVKFQRSAYDHCLYFKKDKDDFVTXXXX 145
            G+   VC LKKSLYGLKQSPRQWYKRFD+++L+ KF+ S YD C+Y K    D       
Sbjct: 926  GKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRISNYDSCVYLK--VVDGSVIYLL 983

Query: 144  XXXXXXXXIGSNMHNINEIKMFLCSEFDMKDLGHAKRILGMDIERKR 4
                       +   I ++K  L SEF+MKDLG AK+ILGM+I R+R
Sbjct: 984  LYVDDMLIAAKDKSEIEKLKAQLSSEFEMKDLGAAKKILGMEITRER 1030



 Score =  198 bits (503), Expect(2) = e-115
 Identities = 119/280 (42%), Positives = 158/280 (56%), Gaps = 3/280 (1%)
 Frame = -3

Query: 1547 KVKTLRTDNGLEFCNLEFDSFCVEKGIQRHRTVRHTPQQNGVAERLNRTIMDKVKCMVIS 1368
            KVK LRTDNG+EFC+  F S+C  +GI  H T  HTPQQN VAER+NRTI+ K +CM+ +
Sbjct: 526  KVKILRTDNGMEFCSKIFKSYCKSEGIVCHYTAPHTPQQNDVAERMNRTIISKARCMLSN 585

Query: 1367 YGLAKGF*REASCTAVYLINRSPSSAINFKTPEELWSGKPPKLSHLRVFGCSAYAHQIEG 1188
             GL K F  EA  TA YLINRSP  AI+ KTP E+WSG P   S LRVFGC+AYAH   G
Sbjct: 586  AGLPKQFWAEAVSTACYLINRSPGYAIDKKTPIEVWSGSPTNYSDLRVFGCTAYAHVDNG 645

Query: 1187 KLEARAVKCVLLGYPTGVKGYRL*VLGEKCIKIINSRDVVFNEMEMPCLKTESE-PKEQP 1011
            KLE RA+KC+ LGY +GVKGY+L     K  K++ SR+VVF+E  +   K  +  P E  
Sbjct: 646  KLEPRAIKCIFLGYASGVKGYKLWCPETK--KVVISRNVVFHESVILHDKPSTNVPVESQ 703

Query: 1010 QVKNVQIEVETHKFKHL-GVDPSVRPQQINVEETAPESPQQQQQPDLNEPKNPSLGEAHE 834
            +  +VQ+E       HL     +   + + + + AP             PK         
Sbjct: 704  EKASVQVE-------HLISSGHAPEKEDVAINQDAPVIEDSDSSIVHQSPKR-------- 748

Query: 833  AQVDLQDYQLARDRERREVRPNLRY-SSLNLIEYALASGE 717
                     +A+D+ +R ++P  RY     ++ YAL+  E
Sbjct: 749  --------SIAKDKPKRNIKPPRRYIEEAKIVAYALSVAE 780


>pir||S23319 hypothetical protein 2 - Arabidopsis thaliana retrotransposon Ta1-2
            (strain Landsberg) (fragment) gi|16384|emb|CAA37924.1|
            unnamed protein product [Arabidopsis thaliana]
          Length = 1084

 Score =  224 bits (571), Expect(2) = e-115
 Identities = 113/232 (48%), Positives = 156/232 (67%), Gaps = 2/232 (0%)
 Frame = -2

Query: 693  YKEAMKEEMDSLIKNETWKLVNKSESQRVVKCKWLYKIKDGVSPHDPPRYKARLVARGFT 514
            +K A  EE +SLIKN TW LV+K + ++++ C+WL+K+K G+   +P RYKARLVA+G+T
Sbjct: 761  WKLATHEEKNSLIKNGTWVLVDKPKDRKIIGCRWLFKMKSGIPGVEPVRYKARLVAKGYT 820

Query: 513  QLEGVDYNEAFSPVVKYKTIRVILALVAQFNWELEQLDVKYAFLHGELEEVIYMAQPQGF 334
            Q EGVDY E F+PV K+ +IR+++++V   + ELEQ+DVK  FLHGELEE +YM QP GF
Sbjct: 821  QREGVDYQEIFAPVAKHTSIRILMSVVVDQDLELEQMDVKTTFLHGELEEELYMEQPDGF 880

Query: 333  EVKGRFEKVCLLKKSLYGLKQSPRQWYKRFDNYVLTVKFQRSAYDHCLYFKK--DKDDFV 160
              +    KVCLLKKSLYGLKQSPRQW KRF  +++   F RS +D C+Y K+  ++D   
Sbjct: 881  ISEDGENKVCLLKKSLYGLKQSPRQWNKRFSRFMIDQNFIRSEHDACVYVKQAGEQDHLY 940

Query: 159  TXXXXXXXXXXXXIGSNMHNINEIKMFLCSEFDMKDLGHAKRILGMDIERKR 4
                           S ++ + ++ M    EF+MKD+G A RILG+DI R R
Sbjct: 941  LLLYVDDMLIAGKSKSEINKVEQLSM----EFEMKDMGPASRILGIDIIRDR 988



 Score =  220 bits (560), Expect(2) = e-115
 Identities = 129/290 (44%), Positives = 181/290 (62%), Gaps = 8/290 (2%)
 Frame = -3

Query: 1547 KVKTLRTDNGLEFCNLEFDSFCVEKGIQRHRTVRHTPQQNGVAERLNRTIMDKVKCMVIS 1368
            KVK LRTDNGLEFCNL+FD++C + GI+RH T  +TPQQNGVA+R+NRTIM+KV+CM+  
Sbjct: 469  KVKCLRTDNGLEFCNLKFDAYCKDHGIERHMTCTYTPQQNGVADRMNRTIMEKVRCMLNE 528

Query: 1367 YGLAKGF*REASCTAVYLINRSPSSAINFKTPEELWSGKPPKLSHLRVFGCSAYAHQIEG 1188
             GL + F  EA+ TA YLI+RSP+SAI+   PEELW  K P   HLR FG  AY H  +G
Sbjct: 529  SGLGEEFWAEAAATAAYLISRSPASAIDHNVPEELWLNKKPGYKHLRRFGSIAYVHIDQG 588

Query: 1187 KLEARAVKCVLLGYPTGVKGYRL*VLGEKCIKIINSRDVVFNEMEMPCLKTESEPKEQPQ 1008
            KL+ RA+K + +GYP+G KGY++ +L E+  K + SR+V+F+E          +  E+ +
Sbjct: 589  KLKPRALKGIFIGYPSGTKGYKIWLLEEQ--KCVISRNVLFHEE-----LVYKDTIEKER 641

Query: 1007 VKNVQIEVETH------KFKHLGVDPSVRPQQINVEETAPESPQQQQQPDLNEPKNPSLG 846
            V   + E  +H      K K  G   S    Q++ EE + ES  ++Q+P   EP+     
Sbjct: 642  VVESEAEPASHSKSTLIKMKTPGNLNSGGVIQVSDEEESDESVDEEQEP---EPQ----V 694

Query: 845  EAHEAQV--DLQDYQLARDRERREVRPNLRYSSLNLIEYALASGEAENSE 702
            E  E Q    L +YQL RDRERR++ P  R++  + + +AL + E  + E
Sbjct: 695  ELPETQTTSSLANYQLVRDRERRQIHPPARFTEESGVAFALVTVETLSME 744


>ref|XP_009107606.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103833265
            [Brassica rapa]
          Length = 3353

 Score =  224 bits (570), Expect(2) = e-115
 Identities = 116/231 (50%), Positives = 150/231 (64%)
 Frame = -2

Query: 696  NYKEAMKEEMDSLIKNETWKLVNKSESQRVVKCKWLYKIKDGVSPHDPPRYKARLVARGF 517
            ++  A  EEMDSL +N TW L+ + + Q+ V CKW++K K G+   +P R+K RLVA+GF
Sbjct: 785  HWNNAADEEMDSLNRNHTWDLIERPKGQKTVGCKWIFKYKPGIPGVEPCRHKGRLVAKGF 844

Query: 516  TQLEGVDYNEAFSPVVKYKTIRVILALVAQFNWELEQLDVKYAFLHGELEEVIYMAQPQG 337
            +Q EG+DYNE FSPVVK+ +IR++L++V   ++ELEQLDVK AFLHG L+E I M QP+G
Sbjct: 845  SQKEGIDYNEVFSPVVKHVSIRLMLSIVVNRDYELEQLDVKTAFLHGNLDERILMDQPEG 904

Query: 336  FEVKGRFEKVCLLKKSLYGLKQSPRQWYKRFDNYVLTVKFQRSAYDHCLYFKKDKDDFVT 157
            +   G   KVCLL+KSLYGLKQSPRQW  RFD ++   KF +S YD C+Y +        
Sbjct: 905  YVKPGDENKVCLLRKSLYGLKQSPRQWNLRFDTFMKKEKFIQSDYDSCVYMRNVNTPKAI 964

Query: 156  XXXXXXXXXXXXIGSNMHNINEIKMFLCSEFDMKDLGHAKRILGMDIERKR 4
                         G N   I  +K  L  EF+MKDLG A RILGMDI R R
Sbjct: 965  FLLLYVDDMLIASG-NKEEIQIMKDRLSREFEMKDLGKASRILGMDIIRDR 1014



 Score =  224 bits (570), Expect(2) = e-115
 Identities = 116/231 (50%), Positives = 150/231 (64%)
 Frame = -2

Query: 696  NYKEAMKEEMDSLIKNETWKLVNKSESQRVVKCKWLYKIKDGVSPHDPPRYKARLVARGF 517
            ++  A  EEMDSL +N TW L+ + + Q+ V CKW++K K G+   +P R+K RLVA+GF
Sbjct: 2860 HWNNAADEEMDSLNRNHTWDLIERPKGQKTVGCKWIFKYKPGIPGVEPCRHKGRLVAKGF 2919

Query: 516  TQLEGVDYNEAFSPVVKYKTIRVILALVAQFNWELEQLDVKYAFLHGELEEVIYMAQPQG 337
            +Q EG+DYNE FSPVVK+ +IR++L++V   ++ELEQLDVK AFLHG L+E I M QP+G
Sbjct: 2920 SQKEGIDYNEVFSPVVKHVSIRLMLSIVVNRDYELEQLDVKTAFLHGNLDERILMDQPEG 2979

Query: 336  FEVKGRFEKVCLLKKSLYGLKQSPRQWYKRFDNYVLTVKFQRSAYDHCLYFKKDKDDFVT 157
            +   G   KVCLL+KSLYGLKQSPRQW  RFD ++   KF +S YD C+Y +        
Sbjct: 2980 YVKPGDENKVCLLRKSLYGLKQSPRQWNLRFDTFMKKEKFIQSDYDSCVYMRNVNTPKAI 3039

Query: 156  XXXXXXXXXXXXIGSNMHNINEIKMFLCSEFDMKDLGHAKRILGMDIERKR 4
                         G N   I  +K  L  EF+MKDLG A RILGMDI R R
Sbjct: 3040 FLLLYVDDMLIASG-NKEEIQIMKDRLSREFEMKDLGKASRILGMDIIRDR 3089



 Score =  220 bits (560), Expect(2) = e-115
 Identities = 131/296 (44%), Positives = 175/296 (59%), Gaps = 22/296 (7%)
 Frame = -3

Query: 1547 KVKTLRTDNGLEFCNLEFDSFCVEKGIQRHRTVRHTPQQNGVAERLNRTIMDKVKCMVIS 1368
            K+K LRTDNGLEFCN  FD  C   GI+RHRT  +TPQQNGV+ER+NRTIMDKV+ M+  
Sbjct: 473  KIKCLRTDNGLEFCNNRFDELCRTSGIKRHRTCNYTPQQNGVSERMNRTIMDKVRSMLAE 532

Query: 1367 YGLAKGF*REASCTAVYLINRSPSSAINFKTPEELWSGKPPKLSHLRVFGCSAYAHQIEG 1188
             GL + F  EA+ TAVYLINR+P+S I+FK PEE+WSG  P LSHLR FGC+AY H  + 
Sbjct: 533  TGLGQEFWAEATSTAVYLINRTPNSTIDFKLPEEVWSGNRPDLSHLRRFGCTAYVHVSQE 592

Query: 1187 KLEARAVKCVLLGYPTGVKGYRL*VLGEKCIKIINSRDVVFNEMEMPCLKTESEPKEQPQ 1008
            K + RA+K V +GYP GVKGYR+ +   + +K   SR+VVF E E+       + +    
Sbjct: 593  KTKPRAIKGVFVGYPFGVKGYRVWI--PEDLKCTTSRNVVFREDEL-----YKDTQVNKT 645

Query: 1007 VKNVQIEVETHK-----FKHLGVDPSV--RPQQINVEETAPESP-----QQQQQPDL--- 873
             +N    V+T++      K +   PS+   P   N E      P      QQ   D    
Sbjct: 646  TENGSDSVDTNQKAGNPKKIVSFSPSLIRGPSGPNYEHGETSDPGNTSVSQQDSEDQGSS 705

Query: 872  ------NEPKNPSLGEAHEAQVDLQDYQLARDRERRE-VRPNLRYSSLNLIEYALA 726
                  +E +  +  E +E++  ++ Y LARDR RR+ V+P  RY   NL+ YAL+
Sbjct: 706  SESESDDESEGLTFVEENESESSIEHYMLARDRVRRQNVKPPSRYEDANLVAYALS 761



 Score =  220 bits (560), Expect(2) = e-115
 Identities = 131/296 (44%), Positives = 175/296 (59%), Gaps = 22/296 (7%)
 Frame = -3

Query: 1547 KVKTLRTDNGLEFCNLEFDSFCVEKGIQRHRTVRHTPQQNGVAERLNRTIMDKVKCMVIS 1368
            K+K LRTDNGLEFCN  FD  C   GI+RHRT  +TPQQNGV+ER+NRTIMDKV+ M+  
Sbjct: 2548 KIKCLRTDNGLEFCNNRFDELCRTSGIKRHRTCNYTPQQNGVSERMNRTIMDKVRSMLAE 2607

Query: 1367 YGLAKGF*REASCTAVYLINRSPSSAINFKTPEELWSGKPPKLSHLRVFGCSAYAHQIEG 1188
             GL + F  EA+ TAVYLINR+P+S I+FK PEE+WSG  P LSHLR FGC+AY H  + 
Sbjct: 2608 TGLGQEFWAEATSTAVYLINRTPNSTIDFKLPEEVWSGNRPDLSHLRRFGCTAYVHVSQE 2667

Query: 1187 KLEARAVKCVLLGYPTGVKGYRL*VLGEKCIKIINSRDVVFNEMEMPCLKTESEPKEQPQ 1008
            K + RA+K V +GYP GVKGYR+ +   + +K   SR+VVF E E+       + +    
Sbjct: 2668 KTKPRAIKGVFVGYPFGVKGYRVWI--PEDLKCTTSRNVVFREDEL-----YKDTQVNKT 2720

Query: 1007 VKNVQIEVETHK-----FKHLGVDPSV--RPQQINVEETAPESP-----QQQQQPDL--- 873
             +N    V+T++      K +   PS+   P   N E      P      QQ   D    
Sbjct: 2721 TENGSDSVDTNQKAGNPKKIVSFSPSLIRGPSGPNYEHGETSDPGNTSVSQQDSEDQGSS 2780

Query: 872  ------NEPKNPSLGEAHEAQVDLQDYQLARDRERRE-VRPNLRYSSLNLIEYALA 726
                  +E +  +  E +E++  ++ Y LARDR RR+ V+P  RY   NL+ YAL+
Sbjct: 2781 SESESDDESEGLTFVEENESESSIEHYMLARDRVRRQNVKPPSRYEDANLVAYALS 2836



 Score =  224 bits (570), Expect(2) = 1e-91
 Identities = 116/231 (50%), Positives = 150/231 (64%)
 Frame = -2

Query: 696  NYKEAMKEEMDSLIKNETWKLVNKSESQRVVKCKWLYKIKDGVSPHDPPRYKARLVARGF 517
            ++  A  EEMDSL +N TW L+ + + Q+ V CKW++K K G+   +P R+K RLVA+GF
Sbjct: 1484 HWNNAADEEMDSLNRNHTWDLIERPKGQKTVGCKWIFKYKPGIPGVEPCRHKGRLVAKGF 1543

Query: 516  TQLEGVDYNEAFSPVVKYKTIRVILALVAQFNWELEQLDVKYAFLHGELEEVIYMAQPQG 337
            +Q EG+DYNE FSPVVK+ +IR++L++V   ++ELEQLDVK AFLHG L+E I M QP+G
Sbjct: 1544 SQKEGIDYNEVFSPVVKHVSIRLMLSIVVNRDYELEQLDVKTAFLHGNLDERILMDQPEG 1603

Query: 336  FEVKGRFEKVCLLKKSLYGLKQSPRQWYKRFDNYVLTVKFQRSAYDHCLYFKKDKDDFVT 157
            +   G   KVCLL+KSLYGLKQSPRQW  RFD ++   KF +S YD C+Y +        
Sbjct: 1604 YVKPGDENKVCLLRKSLYGLKQSPRQWNLRFDTFMKKEKFIQSDYDSCVYMRNVNTPKAI 1663

Query: 156  XXXXXXXXXXXXIGSNMHNINEIKMFLCSEFDMKDLGHAKRILGMDIERKR 4
                         G N   I  +K  L  EF+MKDLG A RILGMDI R R
Sbjct: 1664 FLLLYVDDMLIASG-NKEEIQIMKDRLSREFEMKDLGKASRILGMDIIRDR 1713



 Score =  142 bits (359), Expect(2) = 1e-91
 Identities = 101/288 (35%), Positives = 145/288 (50%), Gaps = 33/288 (11%)
 Frame = -3

Query: 1490 SFCVEKGIQRHRTVRHTPQQNGVAERLNRTIMDKVKCMVISYG-----------LAKGF* 1344
            + C E G+Q      H   Q+ +A   NR   ++ K +   Y            L + F 
Sbjct: 1180 AICEELGLQTGSVKMHCDSQSALALAKNRVFHERTKHVANKYHFIRDIVAQETCLLQEFW 1239

Query: 1343 REASCTAVYLINRSPSSAINFKTPEELWSGKPPKLSHLRVFGCSAYAHQIEGKLEARAVK 1164
             EA+ TAVYLINR+P+S I+FK PEE+WSG  P LSHLR FGC+AY H  + K + RA+K
Sbjct: 1240 AEATSTAVYLINRTPNSTIDFKLPEEVWSGNRPDLSHLRRFGCTAYVHVSQEKTKPRAIK 1299

Query: 1163 CVLLGYPTGVKGYRL*VLGEKCIKIINSRDVVFNEMEMPCLKTESEPKEQPQVKNVQIEV 984
             V +GYP GVKGYR+ +   + +K   SR+VVF E E+       + +     +N    V
Sbjct: 1300 GVFVGYPFGVKGYRVWI--PEDLKCTTSRNVVFREDEL-----YKDTQVNKTTENGSDSV 1352

Query: 983  ETHK-----FKHLGVDPSV--RPQQINVEETAPESP-----QQQQQPDL---------NE 867
            +T++      K +   PS+   P   N E      P      QQ   D          +E
Sbjct: 1353 DTNQKAGNPKKIVSFSPSLIRGPSGPNYEHGETSDPGNTSVSQQDSEDQGSSSESESDDE 1412

Query: 866  PKNPSLGEAHEAQVDLQDYQLARDRERRE-VRPNLRYSSLNLIEYALA 726
             +  +  E +E++  ++ Y LARDR RR+ V+P  RY   NL+ YAL+
Sbjct: 1413 SEGLTFVEENESESSIEHYMLARDRVRRQNVKPPSRYEDANLVAYALS 1460


>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
          Length = 1335

 Score =  245 bits (626), Expect(2) = e-114
 Identities = 123/231 (53%), Positives = 161/231 (69%)
 Frame = -2

Query: 696  NYKEAMKEEMDSLIKNETWKLVNKSESQRVVKCKWLYKIKDGVSPHDPPRYKARLVARGF 517
            N+  AM EEM SL KN TW++V   + ++ + CKW++K K+ +S  +PP+YKARLVARG+
Sbjct: 833  NWISAMHEEMQSLEKNSTWEVVPLPKKKKTISCKWIFKRKEALSLSEPPKYKARLVARGY 892

Query: 516  TQLEGVDYNEAFSPVVKYKTIRVILALVAQFNWELEQLDVKYAFLHGELEEVIYMAQPQG 337
            +Q+ GVDYN+ FSPVVK+ +IR  L++VA  + ELEQLDVK AFLHGELEE IYM QP+G
Sbjct: 893  SQIPGVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGELEEDIYMDQPEG 952

Query: 336  FEVKGRFEKVCLLKKSLYGLKQSPRQWYKRFDNYVLTVKFQRSAYDHCLYFKKDKDDFVT 157
            F V G+ + VC LK+SLYGLKQSPRQW KRFD+++L+  F+RS YD C+Y K      + 
Sbjct: 953  FIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYDSCVYIKHVNGSPI- 1011

Query: 156  XXXXXXXXXXXXIGSNMHNINEIKMFLCSEFDMKDLGHAKRILGMDIERKR 4
                           +   I ++K  L SEFDMKDLG AK+ILGM+I R R
Sbjct: 1012 -YLLLYVDDMLIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILGMEISRDR 1061



 Score =  197 bits (500), Expect(2) = e-114
 Identities = 119/280 (42%), Positives = 164/280 (58%), Gaps = 3/280 (1%)
 Frame = -3

Query: 1547 KVKTLRTDNGLEFCNLEFDSFCVEKGIQRHRTVRHTPQQNGVAERLNRTIMDKVKCMVIS 1368
            KVK L TDNG EFC+  F+ +C ++GI RH T+ HTPQQNGVAER+NRTI+ + +CM+  
Sbjct: 548  KVKLLCTDNGGEFCSHAFNDYCRQEGIVRHHTIPHTPQQNGVAERMNRTIISRARCMLSH 607

Query: 1367 YGLAKGF*REASCTAVYLINRSPSSAINFKTPEELWSGKPPKLSHLRVFGCSAYAHQIEG 1188
              + K F  EA+ TA YLINRSPS  +N KTP E+WSG P   S L+VFGC+AYAH   G
Sbjct: 608  ARMNKRFWAEAASTACYLINRSPSIPLNKKTPIEVWSGTPADYSQLKVFGCTAYAHVDNG 667

Query: 1187 KLEARAVKCVLLGYPTGVKGYRL*VLGEKCIKIINSRDVVFNEMEM--PCLKTESEPKEQ 1014
            KLE RAVKC+ LGY +GVKGY+L     +  K   SR VVFNE  M    L +E  P+++
Sbjct: 668  KLEPRAVKCLFLGYGSGVKGYKL--WNPETGKTFMSRSVVFNESVMFTNSLPSEHVPEKE 725

Query: 1013 PQVKNVQIEVETHKFKHLGVDPSVRPQQINVEETAPESPQQQQQPDLNEPKNPSLGEAHE 834
             Q  ++Q+E       H+  D  V+ + ++ ++            D  +   P L     
Sbjct: 726  LQRMHMQVE-------HVDDDTGVQVEPVDEQDDHNNDVADDDAHDDVQQTPPIL----- 773

Query: 833  AQVDLQDYQLARDRERREVRPNLR-YSSLNLIEYALASGE 717
             Q++ +D  +A+ + +R  +P  R     NL  YAL+  E
Sbjct: 774  -QLE-EDLSIAQRKSKRTTKPPKRLIEECNLSYYALSCAE 811