BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia23_contig00002534
         (420 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011092285.1| PREDICTED: pentatricopeptide repeat-containi...   255   7e-66
ref|XP_011092259.1| PREDICTED: pentatricopeptide repeat-containi...   255   7e-66
ref|XP_012843730.1| PREDICTED: pentatricopeptide repeat-containi...   248   1e-63
gb|EYU32118.1| hypothetical protein MIMGU_mgv1a019324mg, partial...   248   1e-63
emb|CDP08816.1| unnamed protein product [Coffea canephora]            242   6e-62
ref|XP_009762816.1| PREDICTED: pentatricopeptide repeat-containi...   241   1e-61
ref|XP_009621687.1| PREDICTED: pentatricopeptide repeat-containi...   241   2e-61
ref|XP_004231185.2| PREDICTED: pentatricopeptide repeat-containi...   240   3e-61
gb|EPS65170.1| hypothetical protein M569_09608, partial [Genlise...   238   1e-60
ref|XP_010661790.1| PREDICTED: putative pentatricopeptide repeat...   233   3e-59
emb|CAN75306.1| hypothetical protein VITISV_040403 [Vitis vinifera]   233   3e-59
gb|KJB49478.1| hypothetical protein B456_008G121600 [Gossypium r...   231   1e-58
ref|XP_007051809.1| Basic helix-loop-helix DNA-binding superfami...   229   4e-58
ref|XP_010670405.1| PREDICTED: pentatricopeptide repeat-containi...   228   2e-57
ref|XP_010255652.1| PREDICTED: pentatricopeptide repeat-containi...   214   2e-53
ref|XP_002511861.1| pentatricopeptide repeat-containing protein,...   206   6e-51
ref|XP_008810412.1| PREDICTED: pentatricopeptide repeat-containi...   194   2e-47
ref|XP_010914721.1| PREDICTED: pentatricopeptide repeat-containi...   192   7e-47
ref|XP_008439351.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   178   1e-42
ref|XP_011626006.1| PREDICTED: pentatricopeptide repeat-containi...   159   5e-37

>ref|XP_011092285.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
           chloroplastic isoform X2 [Sesamum indicum]
          Length = 477

 Score =  255 bits (652), Expect = 7e-66
 Identities = 113/137 (82%), Positives = 125/137 (91%)
 Frame = -2

Query: 419 MYCKFGRVRQGKAIFDENHLKDFICWSSMINGYGINGCGDEVLECFANMLSCGIKPNDVV 240
           MYCK GR  +GKA+FDEN  KD ICWSSMINGYGINGCG+E L CF+NMLS GI+PNDVV
Sbjct: 277 MYCKLGRTSEGKAVFDENPSKDLICWSSMINGYGINGCGEEALHCFSNMLSYGIEPNDVV 336

Query: 239 FISVLSACSHCGLEYEGWNWFNAMEEIYGISPKLAHYACMVDMLSRQGNIEEALEFVNNM 60
           FIS+LSACSHCGLEYEGWNWF+AME +YG+ PKLAHYACMVDMLSRQGNIEEALEFVNNM
Sbjct: 337 FISLLSACSHCGLEYEGWNWFHAMESMYGVKPKLAHYACMVDMLSRQGNIEEALEFVNNM 396

Query: 59  PVEPDKRIWGALLSGSR 9
           P+EPD+RIWGALL+G R
Sbjct: 397 PIEPDRRIWGALLAGCR 413



 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 38/135 (28%), Positives = 60/135 (44%)
 Frame = -2

Query: 419 MYCKFGRVRQGKAIFDENHLKDFICWSSMINGYGINGCGDEVLECFANMLSCGIKPNDVV 240
           +Y KFG +   + IFD+   KDFI WSSMI  Y  +       +    M     KPN+  
Sbjct: 176 VYVKFGDIDSARNIFDQLKYKDFIAWSSMIAVYAQSTQPKNAFDILREMQLADQKPNEFT 235

Query: 239 FISVLSACSHCGLEYEGWNWFNAMEEIYGISPKLAHYACMVDMLSRQGNIEEALEFVNNM 60
           F+S+L AC+    +  G +  +A     G S      + ++DM  + G   E     +  
Sbjct: 236 FVSLLMACTSLDAKEIGES-IHAQITKDGHSTNAFLTSALIDMYCKLGRTSEGKAVFDEN 294

Query: 59  PVEPDKRIWGALLSG 15
           P   D   W ++++G
Sbjct: 295 P-SKDLICWSSMING 308


>ref|XP_011092259.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
           chloroplastic isoform X1 [Sesamum indicum]
           gi|747045081|ref|XP_011092267.1| PREDICTED:
           pentatricopeptide repeat-containing protein DOT4,
           chloroplastic isoform X1 [Sesamum indicum]
           gi|747045083|ref|XP_011092276.1| PREDICTED:
           pentatricopeptide repeat-containing protein DOT4,
           chloroplastic isoform X1 [Sesamum indicum]
          Length = 639

 Score =  255 bits (652), Expect = 7e-66
 Identities = 113/137 (82%), Positives = 125/137 (91%)
 Frame = -2

Query: 419 MYCKFGRVRQGKAIFDENHLKDFICWSSMINGYGINGCGDEVLECFANMLSCGIKPNDVV 240
           MYCK GR  +GKA+FDEN  KD ICWSSMINGYGINGCG+E L CF+NMLS GI+PNDVV
Sbjct: 439 MYCKLGRTSEGKAVFDENPSKDLICWSSMINGYGINGCGEEALHCFSNMLSYGIEPNDVV 498

Query: 239 FISVLSACSHCGLEYEGWNWFNAMEEIYGISPKLAHYACMVDMLSRQGNIEEALEFVNNM 60
           FIS+LSACSHCGLEYEGWNWF+AME +YG+ PKLAHYACMVDMLSRQGNIEEALEFVNNM
Sbjct: 499 FISLLSACSHCGLEYEGWNWFHAMESMYGVKPKLAHYACMVDMLSRQGNIEEALEFVNNM 558

Query: 59  PVEPDKRIWGALLSGSR 9
           P+EPD+RIWGALL+G R
Sbjct: 559 PIEPDRRIWGALLAGCR 575



 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 38/135 (28%), Positives = 60/135 (44%)
 Frame = -2

Query: 419 MYCKFGRVRQGKAIFDENHLKDFICWSSMINGYGINGCGDEVLECFANMLSCGIKPNDVV 240
           +Y KFG +   + IFD+   KDFI WSSMI  Y  +       +    M     KPN+  
Sbjct: 338 VYVKFGDIDSARNIFDQLKYKDFIAWSSMIAVYAQSTQPKNAFDILREMQLADQKPNEFT 397

Query: 239 FISVLSACSHCGLEYEGWNWFNAMEEIYGISPKLAHYACMVDMLSRQGNIEEALEFVNNM 60
           F+S+L AC+    +  G +  +A     G S      + ++DM  + G   E     +  
Sbjct: 398 FVSLLMACTSLDAKEIGES-IHAQITKDGHSTNAFLTSALIDMYCKLGRTSEGKAVFDEN 456

Query: 59  PVEPDKRIWGALLSG 15
           P   D   W ++++G
Sbjct: 457 P-SKDLICWSSMING 470


>ref|XP_012843730.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
           chloroplastic-like [Erythranthe guttatus]
           gi|848886980|ref|XP_012843731.1| PREDICTED:
           pentatricopeptide repeat-containing protein DOT4,
           chloroplastic-like [Erythranthe guttatus]
          Length = 637

 Score =  248 bits (632), Expect = 1e-63
 Identities = 110/139 (79%), Positives = 124/139 (89%)
 Frame = -2

Query: 419 MYCKFGRVRQGKAIFDENHLKDFICWSSMINGYGINGCGDEVLECFANMLSCGIKPNDVV 240
           MYCKFGR RQGK++FDEN   DF+CWSSMINGY INGCG+EVLECF++MLS GI+PNDV+
Sbjct: 437 MYCKFGRTRQGKSVFDENTTNDFVCWSSMINGYAINGCGNEVLECFSDMLSHGIEPNDVI 496

Query: 239 FISVLSACSHCGLEYEGWNWFNAMEEIYGISPKLAHYACMVDMLSRQGNIEEALEFVNNM 60
           F+SVLSACSHCGLEYEGW WF AME  Y I PKLAHYACMVDMLSRQGN+EEALEFVN M
Sbjct: 497 FVSVLSACSHCGLEYEGWRWFLAMEAKYCIKPKLAHYACMVDMLSRQGNVEEALEFVNKM 556

Query: 59  PVEPDKRIWGALLSGSRKA 3
           P+EPDKRIWGA+L+G R +
Sbjct: 557 PMEPDKRIWGAILAGCRNS 575


>gb|EYU32118.1| hypothetical protein MIMGU_mgv1a019324mg, partial [Erythranthe
           guttata]
          Length = 499

 Score =  248 bits (632), Expect = 1e-63
 Identities = 110/139 (79%), Positives = 124/139 (89%)
 Frame = -2

Query: 419 MYCKFGRVRQGKAIFDENHLKDFICWSSMINGYGINGCGDEVLECFANMLSCGIKPNDVV 240
           MYCKFGR RQGK++FDEN   DF+CWSSMINGY INGCG+EVLECF++MLS GI+PNDV+
Sbjct: 305 MYCKFGRTRQGKSVFDENTTNDFVCWSSMINGYAINGCGNEVLECFSDMLSHGIEPNDVI 364

Query: 239 FISVLSACSHCGLEYEGWNWFNAMEEIYGISPKLAHYACMVDMLSRQGNIEEALEFVNNM 60
           F+SVLSACSHCGLEYEGW WF AME  Y I PKLAHYACMVDMLSRQGN+EEALEFVN M
Sbjct: 365 FVSVLSACSHCGLEYEGWRWFLAMEAKYCIKPKLAHYACMVDMLSRQGNVEEALEFVNKM 424

Query: 59  PVEPDKRIWGALLSGSRKA 3
           P+EPDKRIWGA+L+G R +
Sbjct: 425 PMEPDKRIWGAILAGCRNS 443


>emb|CDP08816.1| unnamed protein product [Coffea canephora]
          Length = 612

 Score =  242 bits (618), Expect = 6e-62
 Identities = 105/138 (76%), Positives = 121/138 (87%)
 Frame = -2

Query: 419 MYCKFGRVRQGKAIFDENHLKDFICWSSMINGYGINGCGDEVLECFANMLSCGIKPNDVV 240
           MYCK GR RQG A+FDENH +D +CWSSMINGYGING G+E L CF+NML CG+KPNDVV
Sbjct: 357 MYCKVGRTRQGVALFDENHSRDLVCWSSMINGYGINGLGEEALHCFSNMLHCGVKPNDVV 416

Query: 239 FISVLSACSHCGLEYEGWNWFNAMEEIYGISPKLAHYACMVDMLSRQGNIEEALEFVNNM 60
           FIS+L+ACSHCGLEYEGW+WF AM E +GI+PKLAHYACMVDMLSRQGN+EEA EFV  M
Sbjct: 417 FISLLAACSHCGLEYEGWSWFYAMGEKFGITPKLAHYACMVDMLSRQGNVEEAFEFVKKM 476

Query: 59  PVEPDKRIWGALLSGSRK 6
           P+ PDKRIWGA+L+G R+
Sbjct: 477 PINPDKRIWGAILAGCRE 494



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 28/69 (40%), Positives = 38/69 (55%)
 Frame = -2

Query: 419 MYCKFGRVRQGKAIFDENHLKDFICWSSMINGYGINGCGDEVLECFANMLSCGIKPNDVV 240
           MY  FG +   K +FD    KD I WS+MI  Y  N    +  + +  M S G KPN+V 
Sbjct: 256 MYANFGEIGSAKTLFDYLDNKDLIAWSAMIAAYVQNEQPFDAFKVYRKMQSAGEKPNEVT 315

Query: 239 FISVLSACS 213
           F+S+L +CS
Sbjct: 316 FLSLLQSCS 324


>ref|XP_009762816.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Nicotiana sylvestris]
          Length = 629

 Score =  241 bits (616), Expect = 1e-61
 Identities = 110/138 (79%), Positives = 121/138 (87%)
 Frame = -2

Query: 419 MYCKFGRVRQGKAIFDENHLKDFICWSSMINGYGINGCGDEVLECFANMLSCGIKPNDVV 240
           MYCKFGR+ QG+AIF E   KD ICWSSMINGYGING G+E L+CF +ML+ GIKPNDVV
Sbjct: 425 MYCKFGRISQGEAIFSECPSKDLICWSSMINGYGINGHGNEALQCFLDMLNTGIKPNDVV 484

Query: 239 FISVLSACSHCGLEYEGWNWFNAMEEIYGISPKLAHYACMVDMLSRQGNIEEALEFVNNM 60
           FIS LSACSHCGLEYE WNWF AMEE + ++PKLAHYACMVDMLSRQGN+EEALEFVNNM
Sbjct: 485 FISALSACSHCGLEYEAWNWFYAMEERFSVTPKLAHYACMVDMLSRQGNVEEALEFVNNM 544

Query: 59  PVEPDKRIWGALLSGSRK 6
           PVEPDKRIWG LL+G RK
Sbjct: 545 PVEPDKRIWGTLLAGCRK 562



 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 36/135 (26%), Positives = 62/135 (45%)
 Frame = -2

Query: 419 MYCKFGRVRQGKAIFDENHLKDFICWSSMINGYGINGCGDEVLECFANMLSCGIKPNDVV 240
           MY  FG +   +++FD    KD I WS+MI  Y  +       + +  M S   KPN+++
Sbjct: 324 MYGDFGDIESARSLFDHLKPKDLIAWSTMIAAYAQSELPSNAFDIYQQMRSANEKPNEII 383

Query: 239 FISVLSACSHCGLEYEGWNWFNAMEEIYGISPKLAHYACMVDMLSRQGNIEEALEFVNNM 60
           ++S+L ACS    E  G    +A     G +      + ++DM  + G I +     +  
Sbjct: 384 YVSLLRACSSMAAEEIG-EGIHAQVVKIGNTSNAFLISSLIDMYCKFGRISQGEAIFSEC 442

Query: 59  PVEPDKRIWGALLSG 15
           P   D   W ++++G
Sbjct: 443 P-SKDLICWSSMING 456


>ref|XP_009621687.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Nicotiana tomentosiformis]
           gi|697135271|ref|XP_009621688.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g11290-like [Nicotiana tomentosiformis]
           gi|697135273|ref|XP_009621689.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g11290-like [Nicotiana tomentosiformis]
          Length = 652

 Score =  241 bits (614), Expect = 2e-61
 Identities = 111/138 (80%), Positives = 121/138 (87%)
 Frame = -2

Query: 419 MYCKFGRVRQGKAIFDENHLKDFICWSSMINGYGINGCGDEVLECFANMLSCGIKPNDVV 240
           MYCKFGR+ QG AIF E   KD ICWSSMINGYGING G++ LECF +ML+ GIKPNDVV
Sbjct: 439 MYCKFGRISQGTAIFSEFPNKDLICWSSMINGYGINGHGNKALECFLDMLNSGIKPNDVV 498

Query: 239 FISVLSACSHCGLEYEGWNWFNAMEEIYGISPKLAHYACMVDMLSRQGNIEEALEFVNNM 60
           FISVLSACSHC LEYEGWNWF AMEE + ++PKLAHYACMVDMLSRQGNIEEALEFVNNM
Sbjct: 499 FISVLSACSHCDLEYEGWNWFYAMEERFDVTPKLAHYACMVDMLSRQGNIEEALEFVNNM 558

Query: 59  PVEPDKRIWGALLSGSRK 6
           P+EPDKRIWG LL+G RK
Sbjct: 559 PIEPDKRIWGTLLAGCRK 576



 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 34/135 (25%), Positives = 61/135 (45%)
 Frame = -2

Query: 419 MYCKFGRVRQGKAIFDENHLKDFICWSSMINGYGINGCGDEVLECFANMLSCGIKPNDVV 240
           MY     +   +++FD    +D I WS+MI  Y  +       + +  M S   KPN+++
Sbjct: 338 MYGDLCEIESARSLFDRLKPRDLIAWSTMIAAYAQSELPSNAFDIYWQMQSANEKPNEII 397

Query: 239 FISVLSACSHCGLEYEGWNWFNAMEEIYGISPKLAHYACMVDMLSRQGNIEEALEFVNNM 60
           ++S+L ACS    E  G      + +I  IS      + ++DM  + G I +     +  
Sbjct: 398 YVSLLQACSSMAAEEIGEGIHAQVIKIVNISNPFL-ISSLIDMYCKFGRISQGTAIFSEF 456

Query: 59  PVEPDKRIWGALLSG 15
           P   D   W ++++G
Sbjct: 457 P-NKDLICWSSMING 470


>ref|XP_004231185.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Solanum lycopersicum]
          Length = 612

 Score =  240 bits (612), Expect = 3e-61
 Identities = 106/138 (76%), Positives = 124/138 (89%)
 Frame = -2

Query: 419 MYCKFGRVRQGKAIFDENHLKDFICWSSMINGYGINGCGDEVLECFANMLSCGIKPNDVV 240
           MYC+FGR+ QG+AIF E   +D ICWSSMINGYGING G+E L+CF++ML+ GIKPND+V
Sbjct: 455 MYCRFGRISQGEAIFSECPNEDLICWSSMINGYGINGHGNEALQCFSDMLNSGIKPNDIV 514

Query: 239 FISVLSACSHCGLEYEGWNWFNAMEEIYGISPKLAHYACMVDMLSRQGNIEEALEFVNNM 60
           F+SVLSACSHCGLEYEGWNWF+AMEE +G++PKLAHYACMVDM+SRQGNIEEA EFVNNM
Sbjct: 515 FVSVLSACSHCGLEYEGWNWFHAMEEQFGVTPKLAHYACMVDMISRQGNIEEAFEFVNNM 574

Query: 59  PVEPDKRIWGALLSGSRK 6
           P+EPDKRIWG LL+  RK
Sbjct: 575 PIEPDKRIWGTLLAVCRK 592



 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 37/135 (27%), Positives = 62/135 (45%)
 Frame = -2

Query: 419 MYCKFGRVRQGKAIFDENHLKDFICWSSMINGYGINGCGDEVLECFANMLSCGIKPNDVV 240
           MY  F  +   +++FD    KD I WS+MI  Y  + C     + +  M S   KPN+++
Sbjct: 354 MYGGFADIESARSLFDPLKSKDLIAWSTMIAAYAQSECPSNAFDIYRQMQSANEKPNEII 413

Query: 239 FISVLSACSHCGLEYEGWNWFNAMEEIYGISPKLAHYACMVDMLSRQGNIEEALEFVNNM 60
           ++S++ ACS    E  G    +A     G +        ++DM  R G I +     +  
Sbjct: 414 YVSLIQACSSITAEVIG-EGIHAQVIKSGNTSNAFLITSLIDMYCRFGRISQGEAIFSEC 472

Query: 59  PVEPDKRIWGALLSG 15
           P E D   W ++++G
Sbjct: 473 PNE-DLICWSSMING 486


>gb|EPS65170.1| hypothetical protein M569_09608, partial [Genlisea aurea]
          Length = 579

 Score =  238 bits (607), Expect = 1e-60
 Identities = 105/139 (75%), Positives = 121/139 (87%)
 Frame = -2

Query: 419 MYCKFGRVRQGKAIFDENHLKDFICWSSMINGYGINGCGDEVLECFANMLSCGIKPNDVV 240
           MYC FG+ R+G A+F EN  +DFICWSSMINGY ING G E L+CF++MLSCGI+PNDVV
Sbjct: 385 MYCNFGKTREGNAVFIENSCRDFICWSSMINGYAINGFGGEALKCFSDMLSCGIEPNDVV 444

Query: 239 FISVLSACSHCGLEYEGWNWFNAMEEIYGISPKLAHYACMVDMLSRQGNIEEALEFVNNM 60
           F+S LSACSHCGL+YEGWN F+AME +YG+ PKLAHYACMVDMLSRQGN+EEAL+FV+ M
Sbjct: 445 FVSALSACSHCGLDYEGWNLFHAMEPVYGVEPKLAHYACMVDMLSRQGNLEEALDFVDRM 504

Query: 59  PVEPDKRIWGALLSGSRKA 3
           PVEPD RIWGALLSG R A
Sbjct: 505 PVEPDNRIWGALLSGCRNA 523


>ref|XP_010661790.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g01580 [Vitis vinifera]
          Length = 868

 Score =  233 bits (595), Expect = 3e-59
 Identities = 102/137 (74%), Positives = 123/137 (89%)
 Frame = -2

Query: 419 MYCKFGRVRQGKAIFDENHLKDFICWSSMINGYGINGCGDEVLECFANMLSCGIKPNDVV 240
           +YCKFGR+ QG+AIF+E   KD +CWSSMINGYG+NGCGDE LE F+NML+CG+KPN+VV
Sbjct: 435 LYCKFGRINQGRAIFNEIPTKDLVCWSSMINGYGLNGCGDEALETFSNMLACGVKPNEVV 494

Query: 239 FISVLSACSHCGLEYEGWNWFNAMEEIYGISPKLAHYACMVDMLSRQGNIEEALEFVNNM 60
           FISVLSACSHCGLE+EGW+ F++ME+ YGI PKL HYACMVD++SR+GNIE AL+FVN M
Sbjct: 495 FISVLSACSHCGLEHEGWSCFSSMEQKYGIIPKLPHYACMVDLISRRGNIEGALQFVNKM 554

Query: 59  PVEPDKRIWGALLSGSR 9
           P+EPDKRIWGALL+G R
Sbjct: 555 PMEPDKRIWGALLAGCR 571



 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 39/135 (28%), Positives = 67/135 (49%)
 Frame = -2

Query: 419 MYCKFGRVRQGKAIFDENHLKDFICWSSMINGYGINGCGDEVLECFANMLSCGIKPNDVV 240
           MY KFG +     +FD+ + KD+I WS+MI+ +  +      LE F  M S   +PN++ 
Sbjct: 334 MYAKFGELESAIIVFDQLNKKDYISWSAMISVHAHSRHPYNALETFKQMQSTDERPNEIT 393

Query: 239 FISVLSACSHCGLEYEGWNWFNAMEEIYGISPKLAHYACMVDMLSRQGNIEEALEFVNNM 60
           F+S+L ACS  G +  G +   A     G        + ++D+  + G I +     N +
Sbjct: 394 FVSLLQACSLIGAQELGES-IQAHATKAGYLSNAFLSSALIDLYCKFGRINQGRAIFNEI 452

Query: 59  PVEPDKRIWGALLSG 15
           P + D   W ++++G
Sbjct: 453 PTK-DLVCWSSMING 466


>emb|CAN75306.1| hypothetical protein VITISV_040403 [Vitis vinifera]
          Length = 826

 Score =  233 bits (595), Expect = 3e-59
 Identities = 102/137 (74%), Positives = 123/137 (89%)
 Frame = -2

Query: 419 MYCKFGRVRQGKAIFDENHLKDFICWSSMINGYGINGCGDEVLECFANMLSCGIKPNDVV 240
           +YCKFGR+ QG+AIF+E   KD +CWSSMINGYG+NGCGDE LE F+NML+CG+KPN+VV
Sbjct: 435 LYCKFGRINQGRAIFNEIPTKDLVCWSSMINGYGLNGCGDEALETFSNMLACGVKPNEVV 494

Query: 239 FISVLSACSHCGLEYEGWNWFNAMEEIYGISPKLAHYACMVDMLSRQGNIEEALEFVNNM 60
           FISVLSACSHCGLE+EGW+ F++ME+ YGI PKL HYACMVD++SR+GNIE AL+FVN M
Sbjct: 495 FISVLSACSHCGLEHEGWSCFSSMEQKYGIIPKLPHYACMVDLISRRGNIEGALQFVNKM 554

Query: 59  PVEPDKRIWGALLSGSR 9
           P+EPDKRIWGALL+G R
Sbjct: 555 PMEPDKRIWGALLAGCR 571



 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 39/135 (28%), Positives = 67/135 (49%)
 Frame = -2

Query: 419 MYCKFGRVRQGKAIFDENHLKDFICWSSMINGYGINGCGDEVLECFANMLSCGIKPNDVV 240
           MY KFG +     +FD+ + KD+I WS+MI+ +  +      LE F  M S   +PN++ 
Sbjct: 334 MYAKFGELESAIIVFDQLNKKDYISWSAMISVHAHSRHPYNALETFKQMQSTDERPNEIT 393

Query: 239 FISVLSACSHCGLEYEGWNWFNAMEEIYGISPKLAHYACMVDMLSRQGNIEEALEFVNNM 60
           F+S+L ACS  G +  G +   A     G        + ++D+  + G I +     N +
Sbjct: 394 FVSLLQACSLIGAQELGES-IQAHATKAGYLSNAFLSSALIDLYCKFGRINQGRAIFNEI 452

Query: 59  PVEPDKRIWGALLSG 15
           P + D   W ++++G
Sbjct: 453 PTK-DLVCWSSMING 466


>gb|KJB49478.1| hypothetical protein B456_008G121600 [Gossypium raimondii]
          Length = 629

 Score =  231 bits (589), Expect = 1e-58
 Identities = 100/136 (73%), Positives = 121/136 (88%)
 Frame = -2

Query: 416 YCKFGRVRQGKAIFDENHLKDFICWSSMINGYGINGCGDEVLECFANMLSCGIKPNDVVF 237
           YC+ GRV+QGKA+FDE  +KD ICWSS+INGYG+NG G E LE F+NML CGIKPN+++F
Sbjct: 440 YCRSGRVKQGKALFDEVPVKDLICWSSLINGYGLNGYGIEALETFSNMLDCGIKPNEIIF 499

Query: 236 ISVLSACSHCGLEYEGWNWFNAMEEIYGISPKLAHYACMVDMLSRQGNIEEALEFVNNMP 57
           +SVLSACSHCGLEYEGWNWF +M+E Y ++PKLAHYACMVD+LSRQGNIE+AL+FV  MP
Sbjct: 500 LSVLSACSHCGLEYEGWNWFYSMKEKYNVTPKLAHYACMVDLLSRQGNIEQALDFVKKMP 559

Query: 56  VEPDKRIWGALLSGSR 9
           +EPDKRIWGA+L+G R
Sbjct: 560 MEPDKRIWGAILAGCR 575



 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 3/138 (2%)
 Frame = -2

Query: 419 MYCKFGRVRQGKAIFDENHLKDFICWSSMINGYGINGCGDEVLECFANMLSCGIKPNDVV 240
           MY KFG V   +++FD    KD I W++MI+ Y  +      ++ F  ML    KPN+  
Sbjct: 334 MYAKFGMVCSARSVFDHIGNKDVIAWNAMISAYTQSKLPFNAVDTFTQMLHMNAKPNEFS 393

Query: 239 FISVLSACSHCG---LEYEGWNWFNAMEEIYGISPKLAHYACMVDMLSRQGNIEEALEFV 69
            IS+L  CS      + +E  +  +A  E  G S  +   + ++D   R G +++     
Sbjct: 394 LISLLQMCSLMASQEVSHELGDSIHAFIEKVGYSRNVYLSSALIDFYCRSGRVKQGKALF 453

Query: 68  NNMPVEPDKRIWGALLSG 15
           + +PV+ D   W +L++G
Sbjct: 454 DEVPVK-DLICWSSLING 470


>ref|XP_007051809.1| Basic helix-loop-helix DNA-binding superfamily protein [Theobroma
            cacao] gi|508704070|gb|EOX95966.1| Basic helix-loop-helix
            DNA-binding superfamily protein [Theobroma cacao]
          Length = 1279

 Score =  229 bits (585), Expect = 4e-58
 Identities = 103/136 (75%), Positives = 119/136 (87%)
 Frame = -2

Query: 416  YCKFGRVRQGKAIFDENHLKDFICWSSMINGYGINGCGDEVLECFANMLSCGIKPNDVVF 237
            YC+FGRV+QGKA+FDE   KD ICWSSMINGY +NG G E LE FANML CGIKPND++F
Sbjct: 1089 YCRFGRVKQGKALFDEVPTKDLICWSSMINGYVLNGYGIEALETFANMLDCGIKPNDIIF 1148

Query: 236  ISVLSACSHCGLEYEGWNWFNAMEEIYGISPKLAHYACMVDMLSRQGNIEEALEFVNNMP 57
            +SVLSACSHCGL+ EGWNWF +M+E YGI+PKLAHYACMVD+LSRQG+IE+AL FV  MP
Sbjct: 1149 LSVLSACSHCGLKNEGWNWFYSMKEKYGITPKLAHYACMVDLLSRQGHIEQALHFVKKMP 1208

Query: 56   VEPDKRIWGALLSGSR 9
            +EPDKRIWGALL+G R
Sbjct: 1209 MEPDKRIWGALLAGCR 1224


>ref|XP_010670405.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
           chloroplastic-like [Beta vulgaris subsp. vulgaris]
           gi|870869738|gb|KMT20483.1| hypothetical protein
           BVRB_1g004700 [Beta vulgaris subsp. vulgaris]
          Length = 641

 Score =  228 bits (580), Expect = 2e-57
 Identities = 97/137 (70%), Positives = 122/137 (89%)
 Frame = -2

Query: 419 MYCKFGRVRQGKAIFDENHLKDFICWSSMINGYGINGCGDEVLECFANMLSCGIKPNDVV 240
           +YCKFGR++QG+A+FDE+H+KD I WSSMINGYG+NG  +E LE F+NML+ G+KPNDV+
Sbjct: 441 LYCKFGRIKQGRALFDEHHIKDLIIWSSMINGYGLNGFANEALEIFSNMLASGVKPNDVI 500

Query: 239 FISVLSACSHCGLEYEGWNWFNAMEEIYGISPKLAHYACMVDMLSRQGNIEEALEFVNNM 60
           F+SVLS+CSHCGLE EGW WFN M++ YGI PK+AHYACMVD+LSRQGN+EEA++FV NM
Sbjct: 501 FVSVLSSCSHCGLEDEGWYWFNCMQDKYGIVPKIAHYACMVDLLSRQGNVEEAVDFVYNM 560

Query: 59  PVEPDKRIWGALLSGSR 9
            VEPDKRIWG+LL+G +
Sbjct: 561 QVEPDKRIWGSLLAGCK 577



 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 43/141 (30%), Positives = 73/141 (51%), Gaps = 6/141 (4%)
 Frame = -2

Query: 419 MYCKFGRVRQGKAIFDENHLKDFICWSSMINGYGINGCGDEVLECFANMLSCGIKPNDVV 240
           MY KFG V   + +FD+ H KD I W++MI+ Y  +G   E L+ F +M     KPN++ 
Sbjct: 340 MYAKFGEVHPSQLLFDQLHPKDLIAWTAMISAYAQSGYTSEALDTFKHMQLTSEKPNEIT 399

Query: 239 FISVLSACSHCGLEYEGWNWFNAMEEIYGISPKLAH------YACMVDMLSRQGNIEEAL 78
           F+S+L ACS  G +  G       E I+G   K  +       + ++D+  + G I++  
Sbjct: 400 FVSLLQACSSSGTQEFG-------ESIHGYVTKAGYLPNSFLISALIDLYCKFGRIKQGR 452

Query: 77  EFVNNMPVEPDKRIWGALLSG 15
              +   ++ D  IW ++++G
Sbjct: 453 ALFDEHHIK-DLIIWSSMING 472


>ref|XP_010255652.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Nelumbo nucifera]
          Length = 559

 Score =  214 bits (544), Expect = 2e-53
 Identities = 96/138 (69%), Positives = 112/138 (81%)
 Frame = -2

Query: 416 YCKFGRVRQGKAIFDENHLKDFICWSSMINGYGINGCGDEVLECFANMLSCGIKPNDVVF 237
           YCKFG++ +GK +FD    KD ICWSSMI+GYGINGCG E L+ F+ ML CG KPND+VF
Sbjct: 357 YCKFGKLSEGKTLFDRLPTKDLICWSSMIHGYGINGCGIEALDTFSKMLQCGTKPNDIVF 416

Query: 236 ISVLSACSHCGLEYEGWNWFNAMEEIYGISPKLAHYACMVDMLSRQGNIEEALEFVNNMP 57
           ISVLSAC+HCGL  EGW WF++MEE YGI+P L HYACMVD+LSR+G IEEAL+FV  MP
Sbjct: 417 ISVLSACAHCGLIDEGWGWFSSMEEKYGITPTLPHYACMVDLLSRRGYIEEALQFVYRMP 476

Query: 56  VEPDKRIWGALLSGSRKA 3
           VEPD  IWGALLSG R +
Sbjct: 477 VEPDANIWGALLSGCRSS 494



 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 36/135 (26%), Positives = 61/135 (45%)
 Frame = -2

Query: 419 MYCKFGRVRQGKAIFDENHLKDFICWSSMINGYGINGCGDEVLECFANMLSCGIKPNDVV 240
           MY  FG+V     +F   H KD I WS+MI  Y   G     ++ F  M    +KPN + 
Sbjct: 255 MYADFGKVGLAAVLFTHLHHKDLIAWSAMIAIYSRAGYSICAVDTFKQMQLANMKPNKIT 314

Query: 239 FISVLSACSHCGLEYEGWNWFNAMEEIYGISPKLAHYACMVDMLSRQGNIEEALEFVNNM 60
            +S++ AC+  G +  G +  +A     G S      + ++D   + G + E     + +
Sbjct: 315 LVSLVQACASLGAQEPGKS-IHAHVIRVGYSSNGYIMSALIDFYCKFGKLSEGKTLFDRL 373

Query: 59  PVEPDKRIWGALLSG 15
           P + D   W +++ G
Sbjct: 374 PTK-DLICWSSMIHG 387


>ref|XP_002511861.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549041|gb|EEF50530.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 751

 Score =  206 bits (523), Expect = 6e-51
 Identities = 92/137 (67%), Positives = 111/137 (81%)
 Frame = -2

Query: 419 MYCKFGRVRQGKAIFDENHLKDFICWSSMINGYGINGCGDEVLECFANMLSCGIKPNDVV 240
           +YCKFG V++GKA+FDE   KD ICWSSMINGY +NGCG E LE FA+ML+ G KPN+ V
Sbjct: 356 LYCKFGSVKKGKAVFDEISTKDLICWSSMINGYALNGCGSEALETFADMLNWGFKPNETV 415

Query: 239 FISVLSACSHCGLEYEGWNWFNAMEEIYGISPKLAHYACMVDMLSRQGNIEEALEFVNNM 60
           F+S+LS CS CGLE+EG  WF  M+E Y ++PKL+HYACMVD+LSR G+IEEAL FV  M
Sbjct: 416 FLSILSVCSQCGLEHEGRKWFYYMQEKYRLAPKLSHYACMVDLLSRHGHIEEALMFVKKM 475

Query: 59  PVEPDKRIWGALLSGSR 9
           PV PDKRIWGA+L+G R
Sbjct: 476 PVVPDKRIWGAVLAGCR 492



 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 39/141 (27%), Positives = 68/141 (48%), Gaps = 6/141 (4%)
 Frame = -2

Query: 419 MYCKFGRVRQGKAIFDENHLKDFICWSSMINGYGINGCGDEVLECFANMLSCGIKPNDVV 240
           MY KF +      +FD+ + KD I WS+MI+ Y   G   + L  +  M S   K N+V 
Sbjct: 255 MYGKFSKFSSAWLVFDQLNYKDLIAWSAMISVYARGGKPYDALNIYRQMQSTNEKANEVT 314

Query: 239 FISVLSACSHCGLEYEGWNWFNAMEEIYGISPKLAH------YACMVDMLSRQGNIEEAL 78
           F+S+L ACS  G +  G       E I+G   K  H       + ++D+  + G++++  
Sbjct: 315 FVSLLQACSALGAQELG-------ESIHGFITKAGHSSNAFLNSALIDLYCKFGSVKKGK 367

Query: 77  EFVNNMPVEPDKRIWGALLSG 15
              + +  + D   W ++++G
Sbjct: 368 AVFDEISTK-DLICWSSMING 387


>ref|XP_008810412.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Phoenix dactylifera]
          Length = 637

 Score =  194 bits (493), Expect = 2e-47
 Identities = 83/138 (60%), Positives = 106/138 (76%)
 Frame = -2

Query: 416 YCKFGRVRQGKAIFDENHLKDFICWSSMINGYGINGCGDEVLECFANMLSCGIKPNDVVF 237
           YCK G++R+ + +F +   +D +CWSSMINGYGINGCG+E ++ F NML  G+ PN+V F
Sbjct: 438 YCKLGKLREAEILFGKLQKRDLVCWSSMINGYGINGCGEEAIQIFYNMLERGLMPNEVTF 497

Query: 236 ISVLSACSHCGLEYEGWNWFNAMEEIYGISPKLAHYACMVDMLSRQGNIEEALEFVNNMP 57
           +S+LSACSHCGL  EGW WF +M+E +GIS  LAHY C+VD+L RQG +EEALEFVN MP
Sbjct: 498 VSILSACSHCGLVDEGWKWFRSMKEKFGISSTLAHYTCIVDLLGRQGRVEEALEFVNTMP 557

Query: 56  VEPDKRIWGALLSGSRKA 3
           +EPD  +WG LLS  R A
Sbjct: 558 MEPDITVWGVLLSWCRAA 575



 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 39/134 (29%), Positives = 66/134 (49%)
 Frame = -2

Query: 416 YCKFGRVRQGKAIFDENHLKDFICWSSMINGYGINGCGDEVLECFANMLSCGIKPNDVVF 237
           Y +F  V   +A+F++ H KD I WS+MI+ Y  +G  D  LE F  M     + N++ F
Sbjct: 337 YAEFKEVEMVQALFNQLHHKDHIAWSAMISAYSHSGHPDLALEMFKQMQLAKEEANEITF 396

Query: 236 ISVLSACSHCGLEYEGWNWFNAMEEIYGISPKLAHYACMVDMLSRQGNIEEALEFVNNMP 57
           +S+L ACS  G    G +    +  +  +S      A ++D   + G + EA E +    
Sbjct: 397 VSLLQACSLVGALELGKSIHAHVTRLVFVSNMFVTSA-LIDFYCKLGKLREA-EILFGKL 454

Query: 56  VEPDKRIWGALLSG 15
            + D   W ++++G
Sbjct: 455 QKRDLVCWSSMING 468


>ref|XP_010914721.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Elaeis guineensis]
          Length = 640

 Score =  192 bits (488), Expect = 7e-47
 Identities = 83/136 (61%), Positives = 106/136 (77%)
 Frame = -2

Query: 416 YCKFGRVRQGKAIFDENHLKDFICWSSMINGYGINGCGDEVLECFANMLSCGIKPNDVVF 237
           YCK GR+R+ + +F +   +D +CWSSMINGYGINGCG+E ++ F NML  G+ PN+V F
Sbjct: 442 YCKLGRLREAEILFGKLQKRDLVCWSSMINGYGINGCGEEAVQIFYNMLEQGLMPNEVTF 501

Query: 236 ISVLSACSHCGLEYEGWNWFNAMEEIYGISPKLAHYACMVDMLSRQGNIEEALEFVNNMP 57
           +S+LSACSHCGL  EGW WF++M+E +GIS  LAHY C+VD+L  QG +EEALEFVN MP
Sbjct: 502 VSILSACSHCGLVDEGWKWFHSMKEQFGISSTLAHYTCIVDLLGGQGRVEEALEFVNMMP 561

Query: 56  VEPDKRIWGALLSGSR 9
           +EPD  +WGALLS  R
Sbjct: 562 MEPDITVWGALLSWCR 577



 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 26/68 (38%), Positives = 39/68 (57%)
 Frame = -2

Query: 416 YCKFGRVRQGKAIFDENHLKDFICWSSMINGYGINGCGDEVLECFANMLSCGIKPNDVVF 237
           Y +F  V   +A+F++ H KD + WS+MI+ Y   G  D  LE F  M     + N++ F
Sbjct: 337 YAEFKEVEMAQALFNQLHQKDNVAWSAMISAYSHTGHPDLALEMFKQMQLAREEANEITF 396

Query: 236 ISVLSACS 213
           +S+L ACS
Sbjct: 397 VSLLQACS 404


>ref|XP_008439351.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g01580 [Cucumis melo]
          Length = 825

 Score =  178 bits (452), Expect = 1e-42
 Identities = 81/136 (59%), Positives = 103/136 (75%)
 Frame = -2

Query: 416 YCKFGRVRQGKAIFDENHLKDFICWSSMINGYGINGCGDEVLECFANMLSCGIKPNDVVF 237
           YC  GR++ G+ +FDE   KD ICW++MI GYG+NGCG++ L  F++MLS G+KPN VVF
Sbjct: 433 YCTLGRIKLGEHVFDEISTKDLICWNAMIKGYGLNGCGNKALNTFSDMLSYGLKPNGVVF 492

Query: 236 ISVLSACSHCGLEYEGWNWFNAMEEIYGISPKLAHYACMVDMLSRQGNIEEALEFVNNMP 57
            S+LSAC+ CGLE E   WF +M + YGI+P  AHYAC+VD+L R+G I EA+EFV  MP
Sbjct: 493 ASLLSACAQCGLEKEVRMWFRSMIDKYGITPTEAHYACIVDLLVRKGKIGEAVEFVKXMP 552

Query: 56  VEPDKRIWGALLSGSR 9
           VEPD RIWGALL G +
Sbjct: 553 VEPDTRIWGALLLGCK 568



 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 31/77 (40%), Positives = 42/77 (54%)
 Frame = -2

Query: 419 MYCKFGRVRQGKAIFDENHLKDFICWSSMINGYGINGCGDEVLECFANMLSCGIKPNDVV 240
           MY KFG +R  K +FDE   KD I WS+MI+ Y         ++ F  M S   KPN+  
Sbjct: 331 MYAKFGDLRLAKLVFDELVDKDIIAWSAMISVYSHGEDPLNAIQTFKMMQSTNEKPNERT 390

Query: 239 FISVLSACSHCGLEYEG 189
           F+S++ ACS  G +  G
Sbjct: 391 FVSLMDACSSLGAKELG 407


>ref|XP_011626006.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
           chloroplastic-like [Amborella trichopoda]
          Length = 639

 Score =  159 bits (403), Expect = 5e-37
 Identities = 76/134 (56%), Positives = 93/134 (69%)
 Frame = -2

Query: 419 MYCKFGRVRQGKAIFDENHLKDFICWSSMINGYGINGCGDEVLECFANMLSCGIKPNDVV 240
           +YCK G +   KA+FD    KD I WSSMI+GY ING G E L  F +ML+ G+KPN VV
Sbjct: 438 LYCKCGSLHSAKALFDRTDRKDLILWSSMISGYEINGYGKEALRTFYDMLALGLKPNYVV 497

Query: 239 FISVLSACSHCGLEYEGWNWFNAMEEIYGISPKLAHYACMVDMLSRQGNIEEALEFVNNM 60
           FISVLSACSH GL  EG   F +ME  + I P L HYAC+VDML R   +++A+ F+N M
Sbjct: 498 FISVLSACSHGGLVNEGLEVFTSMESEHQIKPDLVHYACVVDMLGRNDKVKDAVNFINEM 557

Query: 59  PVEPDKRIWGALLS 18
           P+EPD  +WGALLS
Sbjct: 558 PMEPDSFVWGALLS 571



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 34/134 (25%), Positives = 60/134 (44%)
 Frame = -2

Query: 416 YCKFGRVRQGKAIFDENHLKDFICWSSMINGYGINGCGDEVLECFANMLSCGIKPNDVVF 237
           Y +FG +     +F++   KD + WS++I+ Y   G  D  LE F  M   G  PN +  
Sbjct: 337 YAEFGELEAVDQLFNQLAYKDLVSWSAIISVYAKAGLADHALELFKQMQLNGKDPNSITL 396

Query: 236 ISVLSACSHCGLEYEGWNWFNAMEEIYGISPKLAHYACMVDMLSRQGNIEEALEFVNNMP 57
           +SVL ACS  G    G    + +         +   + ++D+  + G++  A    +   
Sbjct: 397 VSVLQACSLLGAHKLGQTIHSYVLRHGYFDSNMFLASALIDLYCKCGSLHSAKALFDRTD 456

Query: 56  VEPDKRIWGALLSG 15
              D  +W +++SG
Sbjct: 457 -RKDLILWSSMISG 469