BLASTX nr result

ID: Forsythia23_contig00001983 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia23_contig00001983
         (618 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AIY24421.1| ggpps protein [Jasminum sambac]                         67   7e-09
emb|CDP02801.1| unnamed protein product [Coffea canephora]             64   6e-08
ref|XP_011097207.1| PREDICTED: geranylgeranyl pyrophosphate synt...    62   2e-07
ref|XP_011099575.1| PREDICTED: geranylgeranyl pyrophosphate synt...    61   5e-07
gb|AGL91645.1| geranyl diphosphate synthase large subunit [Catha...    57   9e-06

>gb|AIY24421.1| ggpps protein [Jasminum sambac]
          Length = 360

 Score = 67.0 bits (162), Expect = 7e-09
 Identities = 46/89 (51%), Positives = 52/89 (58%), Gaps = 4/89 (4%)
 Frame = -2

Query: 257 MSLVSPFVTCSQVNNLQSSRSRLTQFVLPHPLKNKLPISHFP---PNSITN-PSVFSSIS 90
           MS+V+PF+TCSQ+ N          F+LPHPLKNK PIS FP   P S T  P   SSIS
Sbjct: 1   MSVVNPFLTCSQIKN--------KPFLLPHPLKNKFPISQFPQFTPTSTTKLPYPSSSIS 52

Query: 89  AILTKEQQEEGKTTQKSQTFSPTPTFNFK 3
           AILT    E+ KTT KS        FNFK
Sbjct: 53  AILT---HEDDKTTLKS--------FNFK 70


>emb|CDP02801.1| unnamed protein product [Coffea canephora]
          Length = 386

 Score = 63.9 bits (154), Expect = 6e-08
 Identities = 45/96 (46%), Positives = 55/96 (57%), Gaps = 11/96 (11%)
 Frame = -2

Query: 257 MSLVSPFVTCSQV----NNLQSSRSRLTQFVLPHPLKNKLPISHFPPNSITNPSV-FS-- 99
           MSLV+   T  Q     NNL SSR       L HPLKNKLP S F PN I   ++ FS  
Sbjct: 1   MSLVNSSATWVQTPSIYNNLTSSRHNSANSYLYHPLKNKLPFSIFLPNPIIKTAIPFSSF 60

Query: 98  SISAILTKEQ----QEEGKTTQKSQTFSPTPTFNFK 3
           SI+AILTKE+    QEE   +++ Q F   P+F+FK
Sbjct: 61  SIAAILTKEKTSAPQEESSKSKEEQIFPTPPSFDFK 96


>ref|XP_011097207.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
           chloroplastic-like [Sesamum indicum]
          Length = 375

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 5/89 (5%)
 Frame = -2

Query: 254 SLVSPFVTCSQ---VNNLQSSRSRLTQFVLPHPLKNKLPISHFPPNSITNPSVFSS--IS 90
           +LV+P  T S+   V ++  SR R T F+LPHPL + LP+S    +    P  FSS  +S
Sbjct: 3   ALVNPITTWSRTSSVKDVNGSRFRSTPFILPHPLHSNLPVSFCFSDPTRKPVSFSSLTVS 62

Query: 89  AILTKEQQEEGKTTQKSQTFSPTPTFNFK 3
           A+L KEQ+EE K  +K+      PTF+FK
Sbjct: 63  AVLVKEQKEESKIIEKA------PTFDFK 85


>ref|XP_011099575.1| PREDICTED: geranylgeranyl pyrophosphate synthase, chloroplastic
           [Sesamum indicum]
          Length = 372

 Score = 60.8 bits (146), Expect = 5e-07
 Identities = 39/84 (46%), Positives = 51/84 (60%), Gaps = 7/84 (8%)
 Frame = -2

Query: 257 MSLVSPFVTCS---QVNNLQSSRSRLTQFVLPHPLKNKLPISHFPPNSITNPSVFS---- 99
           MSL+SP  T S    +NN+ SSRS  T F+LPHPLKN L +S F  +SI     F     
Sbjct: 1   MSLISPITTWSYTNSINNVHSSRS--TPFLLPHPLKNHLHLSFF--SSIPRQKTFDFSSV 56

Query: 98  SISAILTKEQQEEGKTTQKSQTFS 27
           SISA+L KE + + K++   QTF+
Sbjct: 57  SISAVLAKEHKGDSKSSSADQTFN 80


>gb|AGL91645.1| geranyl diphosphate synthase large subunit [Catharanthus roseus]
          Length = 383

 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 38/88 (43%), Positives = 54/88 (61%), Gaps = 6/88 (6%)
 Frame = -2

Query: 248 VSPFVTCSQVNNLQSSRSRLTQFVLPHPLKNKLPISHFPPNSITNPSVFS----SISAIL 81
           ++ +V    +  L++ RS   +  L HPLKN+LPIS F   +I  P +FS    SISAI+
Sbjct: 7   ITTWVPAQSIYCLENGRSSSMRSNLCHPLKNQLPISFFLSGTIRKP-IFSCSRLSISAII 65

Query: 80  TKEQ-QEEGKTTQKSQ-TFSPTPTFNFK 3
           TKEQ QEE ++  K +  FS T +F+FK
Sbjct: 66  TKEQTQEESESKSKKEVAFSSTSSFDFK 93


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