BLASTX nr result
ID: Forsythia23_contig00000542
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia23_contig00000542
(483 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAE46384.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ... 127 3e-27
emb|CAD11990.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ... 127 4e-27
ref|XP_007033270.1| Ribulose bisphosphate carboxylase (small cha... 127 4e-27
ref|XP_007033269.1| Ribulose bisphosphate carboxylase (small cha... 127 4e-27
ref|XP_010036887.1| PREDICTED: ribulose bisphosphate carboxylase... 126 5e-27
dbj|BAI53119.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ... 126 5e-27
ref|XP_002532149.1| Ribulose bisphosphate carboxylase small chai... 126 7e-27
gb|ABK96567.1| unknown [Populus trichocarpa x Populus deltoides] 126 7e-27
gb|ABK96590.1| unknown [Populus trichocarpa x Populus deltoides] 126 7e-27
ref|XP_006383456.1| Ribulose bisphosphate carboxylase small chai... 125 8e-27
ref|XP_011015710.1| PREDICTED: ribulose bisphosphate carboxylase... 125 1e-26
ref|XP_011021244.1| PREDICTED: ribulose bisphosphate carboxylase... 125 1e-26
gb|AFO67218.1| putative ribulose-1,5-bisphosphate carboxylase/ox... 125 1e-26
ref|XP_012487764.1| PREDICTED: ribulose bisphosphate carboxylase... 123 4e-26
gb|KJB10450.1| hypothetical protein B456_001G201800 [Gossypium r... 123 4e-26
sp|P31333.2|RBS_GOSHI RecName: Full=Ribulose bisphosphate carbox... 123 4e-26
gb|AFS41770.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 123 4e-26
gb|AFS41765.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 123 4e-26
gb|AFS41762.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 123 4e-26
gb|AFS41756.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 123 4e-26
>dbj|BAE46384.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Panax ginseng]
Length = 183
Score = 127 bits (319), Expect = 3e-27
Identities = 60/73 (82%), Positives = 66/73 (90%)
Frame = -3
Query: 220 STSAFPVSRKNVDITSLASNGGRVSCMKVWPPLGLKKYETLSYLPNLTREQLLKEVEYLL 41
ST+AFPV+RK DITSL SNGGRV CMKVWPPLGLKK+ETLSYLP LT+EQL KEV+YLL
Sbjct: 33 STAAFPVTRKVNDITSLPSNGGRVQCMKVWPPLGLKKFETLSYLPQLTQEQLSKEVDYLL 92
Query: 40 RSKWIPCLEFELE 2
RS W+PCLEFELE
Sbjct: 93 RSGWVPCLEFELE 105
>emb|CAD11990.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Coffea arabica] gi|24940140|emb|CAD11991.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Coffea arabica]
Length = 181
Score = 127 bits (318), Expect = 4e-27
Identities = 56/73 (76%), Positives = 68/73 (93%)
Frame = -3
Query: 220 STSAFPVSRKNVDITSLASNGGRVSCMKVWPPLGLKKYETLSYLPNLTREQLLKEVEYLL 41
+ S+FP+S+K+VDITSLA+NGGRV CM+VWPP GLKKYETLSYLP+LT EQLLKE++YL+
Sbjct: 33 AASSFPISKKSVDITSLATNGGRVQCMQVWPPRGLKKYETLSYLPDLTDEQLLKEIDYLI 92
Query: 40 RSKWIPCLEFELE 2
RS W+PCLEFELE
Sbjct: 93 RSGWVPCLEFELE 105
>ref|XP_007033270.1| Ribulose bisphosphate carboxylase (small chain) family protein
isoform 2 [Theobroma cacao] gi|508712299|gb|EOY04196.1|
Ribulose bisphosphate carboxylase (small chain) family
protein isoform 2 [Theobroma cacao]
Length = 184
Score = 127 bits (318), Expect = 4e-27
Identities = 61/74 (82%), Positives = 68/74 (91%), Gaps = 1/74 (1%)
Frame = -3
Query: 220 STSAFPVSRK-NVDITSLASNGGRVSCMKVWPPLGLKKYETLSYLPNLTREQLLKEVEYL 44
STSA PV+RK N DITSLASNGGRV CM+VWPPLG KK+ETLSYLP+LTRE+L KEVEYL
Sbjct: 33 STSALPVARKANNDITSLASNGGRVQCMQVWPPLGKKKFETLSYLPDLTRERLFKEVEYL 92
Query: 43 LRSKWIPCLEFELE 2
LR+KW+PCLEFELE
Sbjct: 93 LRNKWVPCLEFELE 106
>ref|XP_007033269.1| Ribulose bisphosphate carboxylase (small chain) family protein
isoform 1 [Theobroma cacao] gi|508712298|gb|EOY04195.1|
Ribulose bisphosphate carboxylase (small chain) family
protein isoform 1 [Theobroma cacao]
Length = 189
Score = 127 bits (318), Expect = 4e-27
Identities = 61/74 (82%), Positives = 68/74 (91%), Gaps = 1/74 (1%)
Frame = -3
Query: 220 STSAFPVSRK-NVDITSLASNGGRVSCMKVWPPLGLKKYETLSYLPNLTREQLLKEVEYL 44
STSA PV+RK N DITSLASNGGRV CM+VWPPLG KK+ETLSYLP+LTRE+L KEVEYL
Sbjct: 33 STSALPVARKANNDITSLASNGGRVQCMQVWPPLGKKKFETLSYLPDLTRERLFKEVEYL 92
Query: 43 LRSKWIPCLEFELE 2
LR+KW+PCLEFELE
Sbjct: 93 LRNKWVPCLEFELE 106
>ref|XP_010036887.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic-like [Eucalyptus grandis]
gi|629082103|gb|KCW48548.1| hypothetical protein
EUGRSUZ_K02223 [Eucalyptus grandis]
Length = 181
Score = 126 bits (317), Expect = 5e-27
Identities = 57/73 (78%), Positives = 66/73 (90%)
Frame = -3
Query: 220 STSAFPVSRKNVDITSLASNGGRVSCMKVWPPLGLKKYETLSYLPNLTREQLLKEVEYLL 41
S SAFPV+RK+ DITSLASNGGRV CM+VWPP+G KK+ETLSYLP L+RE+LLKE+EYLL
Sbjct: 33 SASAFPVTRKSADITSLASNGGRVQCMQVWPPIGKKKFETLSYLPPLSREELLKEIEYLL 92
Query: 40 RSKWIPCLEFELE 2
R W+PCLEFELE
Sbjct: 93 RMNWVPCLEFELE 105
>dbj|BAI53119.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Eucalyptus globulus]
Length = 181
Score = 126 bits (317), Expect = 5e-27
Identities = 57/73 (78%), Positives = 66/73 (90%)
Frame = -3
Query: 220 STSAFPVSRKNVDITSLASNGGRVSCMKVWPPLGLKKYETLSYLPNLTREQLLKEVEYLL 41
S SAFPV+RK+ DITSLASNGGRV CM+VWPP+G KK+ETLSYLP L+RE+LLKE+EYLL
Sbjct: 33 SASAFPVTRKSADITSLASNGGRVQCMQVWPPIGKKKFETLSYLPPLSREELLKEIEYLL 92
Query: 40 RSKWIPCLEFELE 2
R W+PCLEFELE
Sbjct: 93 RMNWVPCLEFELE 105
>ref|XP_002532149.1| Ribulose bisphosphate carboxylase small chain, chloroplast
precursor, putative [Ricinus communis]
gi|223528159|gb|EEF30223.1| Ribulose bisphosphate
carboxylase small chain, chloroplast precursor, putative
[Ricinus communis]
Length = 185
Score = 126 bits (316), Expect = 7e-27
Identities = 60/74 (81%), Positives = 67/74 (90%), Gaps = 1/74 (1%)
Frame = -3
Query: 220 STSAFPVSRK-NVDITSLASNGGRVSCMKVWPPLGLKKYETLSYLPNLTREQLLKEVEYL 44
STSAFPV+RK N DIT+LA+NGGRV CM+VWPPLG KK+ETLSYLP+LTREQL KEVEYL
Sbjct: 33 STSAFPVTRKTNTDITTLANNGGRVQCMQVWPPLGKKKFETLSYLPDLTREQLAKEVEYL 92
Query: 43 LRSKWIPCLEFELE 2
LR W+PCLEFELE
Sbjct: 93 LRKGWVPCLEFELE 106
>gb|ABK96567.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 181
Score = 126 bits (316), Expect = 7e-27
Identities = 59/74 (79%), Positives = 68/74 (91%), Gaps = 1/74 (1%)
Frame = -3
Query: 220 STSAFPVSRK-NVDITSLASNGGRVSCMKVWPPLGLKKYETLSYLPNLTREQLLKEVEYL 44
STSAFPV+RK N DITS+ASNGGRV CM+VWPP GLKK+ETLSYLP+LT EQL +E+EYL
Sbjct: 32 STSAFPVTRKANNDITSIASNGGRVQCMQVWPPTGLKKFETLSYLPDLTTEQLAREIEYL 91
Query: 43 LRSKWIPCLEFELE 2
LR+KW+PCLEFELE
Sbjct: 92 LRNKWVPCLEFELE 105
>gb|ABK96590.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 189
Score = 126 bits (316), Expect = 7e-27
Identities = 59/74 (79%), Positives = 68/74 (91%), Gaps = 1/74 (1%)
Frame = -3
Query: 220 STSAFPVSRK-NVDITSLASNGGRVSCMKVWPPLGLKKYETLSYLPNLTREQLLKEVEYL 44
STSAFPV+RK N DITS+ASNGGRV CM+VWPP GLKK+ETLSYLP+LT EQL +E+EYL
Sbjct: 32 STSAFPVTRKANNDITSIASNGGRVQCMQVWPPTGLKKFETLSYLPDLTTEQLAREIEYL 91
Query: 43 LRSKWIPCLEFELE 2
LR+KW+PCLEFELE
Sbjct: 92 LRNKWVPCLEFELE 105
>ref|XP_006383456.1| Ribulose bisphosphate carboxylase small chain 1A family protein
[Populus trichocarpa] gi|118488169|gb|ABK95904.1|
unknown [Populus trichocarpa]
gi|118488741|gb|ABK96181.1| unknown [Populus
trichocarpa] gi|550339067|gb|ERP61253.1| Ribulose
bisphosphate carboxylase small chain 1A family protein
[Populus trichocarpa]
Length = 181
Score = 125 bits (315), Expect = 8e-27
Identities = 59/74 (79%), Positives = 68/74 (91%), Gaps = 1/74 (1%)
Frame = -3
Query: 220 STSAFPVSRK-NVDITSLASNGGRVSCMKVWPPLGLKKYETLSYLPNLTREQLLKEVEYL 44
STSAFPV+RK N DITS+ASNGGRV CM+VWPP GLKK+ETLSYLP+LT EQL +E+EYL
Sbjct: 32 STSAFPVTRKANNDITSIASNGGRVQCMQVWPPTGLKKFETLSYLPDLTTEQLAQEIEYL 91
Query: 43 LRSKWIPCLEFELE 2
LR+KW+PCLEFELE
Sbjct: 92 LRNKWVPCLEFELE 105
>ref|XP_011015710.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic-like, partial [Populus euphratica]
Length = 167
Score = 125 bits (314), Expect = 1e-26
Identities = 59/74 (79%), Positives = 67/74 (90%), Gaps = 1/74 (1%)
Frame = -3
Query: 220 STSAFPVSRK-NVDITSLASNGGRVSCMKVWPPLGLKKYETLSYLPNLTREQLLKEVEYL 44
STSAFPV+RK N DITS+ASNGGRV CM+VWPP GLKK+ETLSYLP+LT EQL KE++YL
Sbjct: 32 STSAFPVTRKANNDITSIASNGGRVQCMQVWPPTGLKKFETLSYLPDLTTEQLAKEIDYL 91
Query: 43 LRSKWIPCLEFELE 2
LR KW+PCLEFELE
Sbjct: 92 LRMKWVPCLEFELE 105
>ref|XP_011021244.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic-like [Populus euphratica]
Length = 181
Score = 125 bits (314), Expect = 1e-26
Identities = 59/74 (79%), Positives = 67/74 (90%), Gaps = 1/74 (1%)
Frame = -3
Query: 220 STSAFPVSRK-NVDITSLASNGGRVSCMKVWPPLGLKKYETLSYLPNLTREQLLKEVEYL 44
STSAFPV+RK N DITS+ASNGGRV CM+VWPP GLKK+ETLSYLP+LT EQL KE++YL
Sbjct: 32 STSAFPVTRKANNDITSIASNGGRVQCMQVWPPTGLKKFETLSYLPDLTTEQLAKEIDYL 91
Query: 43 LRSKWIPCLEFELE 2
LR KW+PCLEFELE
Sbjct: 92 LRMKWVPCLEFELE 105
>gb|AFO67218.1| putative ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Aralia elata]
Length = 183
Score = 125 bits (314), Expect = 1e-26
Identities = 59/73 (80%), Positives = 65/73 (89%)
Frame = -3
Query: 220 STSAFPVSRKNVDITSLASNGGRVSCMKVWPPLGLKKYETLSYLPNLTREQLLKEVEYLL 41
ST+AFPV+RK DITSL SNGGRV CMKVWPPLGLKK+ETLSYLP LT E+L KEV+YLL
Sbjct: 33 STAAFPVTRKVNDITSLPSNGGRVQCMKVWPPLGLKKFETLSYLPPLTNEELAKEVDYLL 92
Query: 40 RSKWIPCLEFELE 2
RS W+PCLEFELE
Sbjct: 93 RSGWVPCLEFELE 105
>ref|XP_012487764.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic isoform X2 [Gossypium raimondii]
Length = 142
Score = 123 bits (309), Expect = 4e-26
Identities = 61/74 (82%), Positives = 66/74 (89%), Gaps = 1/74 (1%)
Frame = -3
Query: 220 STSAFPVSRK-NVDITSLASNGGRVSCMKVWPPLGLKKYETLSYLPNLTREQLLKEVEYL 44
S SAFPV+RK N DITSLASNGGRV CM+VWPPLG KK+ETLSYLP+LT QL KEV+YL
Sbjct: 33 SASAFPVTRKANNDITSLASNGGRVQCMQVWPPLGKKKFETLSYLPDLTPVQLAKEVDYL 92
Query: 43 LRSKWIPCLEFELE 2
LRSKWIPCLEFELE
Sbjct: 93 LRSKWIPCLEFELE 106
>gb|KJB10450.1| hypothetical protein B456_001G201800 [Gossypium raimondii]
Length = 181
Score = 123 bits (309), Expect = 4e-26
Identities = 61/74 (82%), Positives = 66/74 (89%), Gaps = 1/74 (1%)
Frame = -3
Query: 220 STSAFPVSRK-NVDITSLASNGGRVSCMKVWPPLGLKKYETLSYLPNLTREQLLKEVEYL 44
S SAFPV+RK N DITSLASNGGRV CM+VWPPLG KK+ETLSYLP+LT QL KEV+YL
Sbjct: 33 SASAFPVTRKANNDITSLASNGGRVQCMQVWPPLGKKKFETLSYLPDLTPVQLAKEVDYL 92
Query: 43 LRSKWIPCLEFELE 2
LRSKWIPCLEFELE
Sbjct: 93 LRSKWIPCLEFELE 106
>sp|P31333.2|RBS_GOSHI RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor [Gossypium hirsutum] gi|450505|emb|CAA38026.1|
ribulose bisphosphate carboxylase [Gossypium hirsutum]
gi|371942044|gb|AEX60834.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium hirsutum] gi|406366448|gb|AFS41721.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Gossypium arboreum]
gi|406366458|gb|AFS41726.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium hirsutum] gi|406366488|gb|AFS41741.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Gossypium tomentosum]
gi|406366504|gb|AFS41749.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium mustelinum] gi|406366516|gb|AFS41755.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Gossypium darwinii]
gi|728835395|gb|KHG14838.1| Ribulose bisphosphate
carboxylase small chain, chloroplastic [Gossypium
arboreum]
Length = 182
Score = 123 bits (309), Expect = 4e-26
Identities = 61/74 (82%), Positives = 66/74 (89%), Gaps = 1/74 (1%)
Frame = -3
Query: 220 STSAFPVSRK-NVDITSLASNGGRVSCMKVWPPLGLKKYETLSYLPNLTREQLLKEVEYL 44
S SAFPV+RK N DITSLASNGGRV CM+VWPPLG KK+ETLSYLP+LT QL KEV+YL
Sbjct: 33 SASAFPVTRKANNDITSLASNGGRVQCMQVWPPLGKKKFETLSYLPDLTPVQLAKEVDYL 92
Query: 43 LRSKWIPCLEFELE 2
LRSKWIPCLEFELE
Sbjct: 93 LRSKWIPCLEFELE 106
>gb|AFS41770.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit,
partial (chloroplast) [Gossypium gossypioides]
Length = 168
Score = 123 bits (309), Expect = 4e-26
Identities = 61/74 (82%), Positives = 66/74 (89%), Gaps = 1/74 (1%)
Frame = -3
Query: 220 STSAFPVSRK-NVDITSLASNGGRVSCMKVWPPLGLKKYETLSYLPNLTREQLLKEVEYL 44
S SAFPV+RK N DITSLASNGGRV CM+VWPPLG KK+ETLSYLP+LT QL KEV+YL
Sbjct: 25 SASAFPVTRKANNDITSLASNGGRVQCMQVWPPLGKKKFETLSYLPDLTPVQLAKEVDYL 84
Query: 43 LRSKWIPCLEFELE 2
LRSKWIPCLEFELE
Sbjct: 85 LRSKWIPCLEFELE 98
>gb|AFS41765.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit,
partial (chloroplast) [Gossypium armourianum]
gi|406366540|gb|AFS41767.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial
(chloroplast) [Gossypium davidsonii]
Length = 168
Score = 123 bits (309), Expect = 4e-26
Identities = 61/74 (82%), Positives = 66/74 (89%), Gaps = 1/74 (1%)
Frame = -3
Query: 220 STSAFPVSRK-NVDITSLASNGGRVSCMKVWPPLGLKKYETLSYLPNLTREQLLKEVEYL 44
S SAFPV+RK N DITSLASNGGRV CM+VWPPLG KK+ETLSYLP+LT QL KEV+YL
Sbjct: 25 SASAFPVTRKANNDITSLASNGGRVQCMQVWPPLGKKKFETLSYLPDLTPVQLAKEVDYL 84
Query: 43 LRSKWIPCLEFELE 2
LRSKWIPCLEFELE
Sbjct: 85 LRSKWIPCLEFELE 98
>gb|AFS41762.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit,
partial (chloroplast) [Gossypium herbaceum]
Length = 168
Score = 123 bits (309), Expect = 4e-26
Identities = 61/74 (82%), Positives = 66/74 (89%), Gaps = 1/74 (1%)
Frame = -3
Query: 220 STSAFPVSRK-NVDITSLASNGGRVSCMKVWPPLGLKKYETLSYLPNLTREQLLKEVEYL 44
S SAFPV+RK N DITSLASNGGRV CM+VWPPLG KK+ETLSYLP+LT QL KEV+YL
Sbjct: 25 SASAFPVTRKANNDITSLASNGGRVQCMQVWPPLGKKKFETLSYLPDLTPVQLAKEVDYL 84
Query: 43 LRSKWIPCLEFELE 2
LRSKWIPCLEFELE
Sbjct: 85 LRSKWIPCLEFELE 98
>gb|AFS41756.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium darwinii]
Length = 182
Score = 123 bits (309), Expect = 4e-26
Identities = 61/74 (82%), Positives = 66/74 (89%), Gaps = 1/74 (1%)
Frame = -3
Query: 220 STSAFPVSRK-NVDITSLASNGGRVSCMKVWPPLGLKKYETLSYLPNLTREQLLKEVEYL 44
S SAFPV+RK N DITSLASNGGRV CM+VWPPLG KK+ETLSYLP+LT QL KEV+YL
Sbjct: 33 SASAFPVTRKANNDITSLASNGGRVQCMQVWPPLGKKKFETLSYLPDLTPVQLAKEVDYL 92
Query: 43 LRSKWIPCLEFELE 2
LRSKWIPCLEFELE
Sbjct: 93 LRSKWIPCLEFELE 106