BLASTX nr result
ID: Forsythia23_contig00000246
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia23_contig00000246
(884 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002282322.1| PREDICTED: transcription initiation factor I... 256 2e-65
emb|CDP09102.1| unnamed protein product [Coffea canephora] 253 9e-65
gb|KDO66628.1| hypothetical protein CISIN_1g015442mg [Citrus sin... 248 5e-63
gb|KDO66627.1| hypothetical protein CISIN_1g015442mg [Citrus sin... 248 5e-63
gb|KDO66626.1| hypothetical protein CISIN_1g015442mg [Citrus sin... 248 5e-63
ref|XP_011080825.1| PREDICTED: transcription initiation factor I... 246 2e-62
ref|XP_006424899.1| hypothetical protein CICLE_v10028561mg [Citr... 246 2e-62
ref|XP_007016334.1| Transcription initiation factor IIA subunit ... 246 2e-62
ref|XP_012066966.1| PREDICTED: transcription initiation factor I... 244 6e-62
gb|KJB08915.1| hypothetical protein B456_001G112500 [Gossypium r... 241 4e-61
ref|XP_012475136.1| PREDICTED: transcription initiation factor I... 241 4e-61
ref|XP_006350788.1| PREDICTED: transcription initiation factor I... 239 1e-60
ref|XP_008344833.1| PREDICTED: transcription initiation factor I... 239 2e-60
ref|XP_002520518.1| protein with unknown function [Ricinus commu... 239 2e-60
ref|XP_004241212.1| PREDICTED: transcription initiation factor I... 237 9e-60
ref|XP_009364351.1| PREDICTED: transcription initiation factor I... 235 3e-59
ref|XP_009375942.1| PREDICTED: transcription initiation factor I... 234 4e-59
ref|XP_008384920.1| PREDICTED: transcription initiation factor I... 234 6e-59
ref|XP_010685693.1| PREDICTED: transcription initiation factor I... 234 7e-59
ref|XP_009622244.1| PREDICTED: transcription initiation factor I... 232 2e-58
>ref|XP_002282322.1| PREDICTED: transcription initiation factor IIA subunit 1 [Vitis
vinifera] gi|297746029|emb|CBI16085.3| unnamed protein
product [Vitis vinifera]
Length = 393
Score = 256 bits (653), Expect = 2e-65
Identities = 132/204 (64%), Positives = 146/204 (71%), Gaps = 5/204 (2%)
Frame = -1
Query: 884 QDFFTMPSGKRKREDFPSQQHTGGYIPQQDGAGDIISD--DIKVDQGSSS---QHVLVNA 720
QDFF M SGKRKREDFPSQ HT GYIPQQDGAGD + +++V QGS+S +L A
Sbjct: 190 QDFFMMSSGKRKREDFPSQYHTSGYIPQQDGAGDPAPEVFEVEVSQGSNSIKGHDILTKA 249
Query: 719 TRQMVVQREGLSSRIPQLDGPIPDPYDDVLSTPNIYNYQGVANEDYNIVNTPAPHEMQAP 540
R++ Q G RIPQLDGPIPDPY+DVLSTPNIYNYQGV NEDYNIVNTPAP+++QA
Sbjct: 250 NREIFPQVAGSYVRIPQLDGPIPDPYEDVLSTPNIYNYQGVVNEDYNIVNTPAPNDIQAG 309
Query: 539 TPAPAPQNDIAXXXXXXXXXXXXXXXXXXXXXXXXXLNTTHLVLAQFDKVTRTKSRWKCT 360
TPA QND+ LNT HLVLAQFDKVTRTKS+WKCT
Sbjct: 310 TPAVGIQNDVGDDDDDEPPLNENDDDDLDDVEQGEELNTQHLVLAQFDKVTRTKSKWKCT 369
Query: 359 LKDGIMHINNKDILFNKATGEFDF 288
LKDGIMHINNKDILFNKA GEFDF
Sbjct: 370 LKDGIMHINNKDILFNKANGEFDF 393
>emb|CDP09102.1| unnamed protein product [Coffea canephora]
Length = 411
Score = 253 bits (647), Expect = 9e-65
Identities = 131/199 (65%), Positives = 145/199 (72%)
Frame = -1
Query: 884 QDFFTMPSGKRKREDFPSQQHTGGYIPQQDGAGDIISDDIKVDQGSSSQHVLVNATRQMV 705
QDFF M +GKRKR++F SQ GGYIPQQDGAGD IS+++KV QGS++QH A +M
Sbjct: 214 QDFFMMSAGKRKRDEFASQYPNGGYIPQQDGAGDTISNELKVGQGSNTQHNTTIAGAEMS 273
Query: 704 VQREGLSSRIPQLDGPIPDPYDDVLSTPNIYNYQGVANEDYNIVNTPAPHEMQAPTPAPA 525
+Q SRI QLDGPIPDPYDDVLSTPNIYNYQGV NEDYNIVNTPAP+++QA TPA
Sbjct: 274 LQGGRAVSRISQLDGPIPDPYDDVLSTPNIYNYQGVVNEDYNIVNTPAPNDIQAATPAAV 333
Query: 524 PQNDIAXXXXXXXXXXXXXXXXXXXXXXXXXLNTTHLVLAQFDKVTRTKSRWKCTLKDGI 345
QND LNTTHLVLAQFDKVTRTKSRWKCTLKDGI
Sbjct: 334 TQND-TVDDDEDEPLNEDDDDELDDVDQGEDLNTTHLVLAQFDKVTRTKSRWKCTLKDGI 392
Query: 344 MHINNKDILFNKATGEFDF 288
M INNKDILFNKATGEF+F
Sbjct: 393 MRINNKDILFNKATGEFEF 411
>gb|KDO66628.1| hypothetical protein CISIN_1g015442mg [Citrus sinensis]
Length = 363
Score = 248 bits (632), Expect = 5e-63
Identities = 129/202 (63%), Positives = 144/202 (71%), Gaps = 3/202 (1%)
Frame = -1
Query: 884 QDFFTMPSGKRKREDFPSQQHTGGY-IPQQDGAGDIISD--DIKVDQGSSSQHVLVNATR 714
QDFFTM +GKRKREDFP+Q H GGY IPQQDGAGD +S+ +++V + Q + A R
Sbjct: 163 QDFFTMSAGKRKREDFPAQYHNGGYNIPQQDGAGDAMSEIFELEVSEFPGRQDSVTTANR 222
Query: 713 QMVVQREGLSSRIPQLDGPIPDPYDDVLSTPNIYNYQGVANEDYNIVNTPAPHEMQAPTP 534
++ S +IPQLDGPIPDPYDDVLSTPNIYNYQGV NEDYNIVNTPAP+++QA TP
Sbjct: 223 EIFANLASSSVKIPQLDGPIPDPYDDVLSTPNIYNYQGVVNEDYNIVNTPAPNDIQASTP 282
Query: 533 APAPQNDIAXXXXXXXXXXXXXXXXXXXXXXXXXLNTTHLVLAQFDKVTRTKSRWKCTLK 354
A QND A LNT HLVLAQFDKVTRTKSRWKC LK
Sbjct: 283 AVVTQND-AAEDDDDEPLNENDDDELDDVDQGEELNTQHLVLAQFDKVTRTKSRWKCALK 341
Query: 353 DGIMHINNKDILFNKATGEFDF 288
DGIMHINNKDILFNKATGEFDF
Sbjct: 342 DGIMHINNKDILFNKATGEFDF 363
>gb|KDO66627.1| hypothetical protein CISIN_1g015442mg [Citrus sinensis]
Length = 406
Score = 248 bits (632), Expect = 5e-63
Identities = 129/202 (63%), Positives = 144/202 (71%), Gaps = 3/202 (1%)
Frame = -1
Query: 884 QDFFTMPSGKRKREDFPSQQHTGGY-IPQQDGAGDIISD--DIKVDQGSSSQHVLVNATR 714
QDFFTM +GKRKREDFP+Q H GGY IPQQDGAGD +S+ +++V + Q + A R
Sbjct: 206 QDFFTMSAGKRKREDFPAQYHNGGYNIPQQDGAGDAMSEIFELEVSEFPGRQDSVTTANR 265
Query: 713 QMVVQREGLSSRIPQLDGPIPDPYDDVLSTPNIYNYQGVANEDYNIVNTPAPHEMQAPTP 534
++ S +IPQLDGPIPDPYDDVLSTPNIYNYQGV NEDYNIVNTPAP+++QA TP
Sbjct: 266 EIFANLASSSVKIPQLDGPIPDPYDDVLSTPNIYNYQGVVNEDYNIVNTPAPNDIQASTP 325
Query: 533 APAPQNDIAXXXXXXXXXXXXXXXXXXXXXXXXXLNTTHLVLAQFDKVTRTKSRWKCTLK 354
A QND A LNT HLVLAQFDKVTRTKSRWKC LK
Sbjct: 326 AVVTQND-AAEDDDDEPLNENDDDELDDVDQGEELNTQHLVLAQFDKVTRTKSRWKCALK 384
Query: 353 DGIMHINNKDILFNKATGEFDF 288
DGIMHINNKDILFNKATGEFDF
Sbjct: 385 DGIMHINNKDILFNKATGEFDF 406
>gb|KDO66626.1| hypothetical protein CISIN_1g015442mg [Citrus sinensis]
Length = 386
Score = 248 bits (632), Expect = 5e-63
Identities = 129/202 (63%), Positives = 144/202 (71%), Gaps = 3/202 (1%)
Frame = -1
Query: 884 QDFFTMPSGKRKREDFPSQQHTGGY-IPQQDGAGDIISD--DIKVDQGSSSQHVLVNATR 714
QDFFTM +GKRKREDFP+Q H GGY IPQQDGAGD +S+ +++V + Q + A R
Sbjct: 186 QDFFTMSAGKRKREDFPAQYHNGGYNIPQQDGAGDAMSEIFELEVSEFPGRQDSVTTANR 245
Query: 713 QMVVQREGLSSRIPQLDGPIPDPYDDVLSTPNIYNYQGVANEDYNIVNTPAPHEMQAPTP 534
++ S +IPQLDGPIPDPYDDVLSTPNIYNYQGV NEDYNIVNTPAP+++QA TP
Sbjct: 246 EIFANLASSSVKIPQLDGPIPDPYDDVLSTPNIYNYQGVVNEDYNIVNTPAPNDIQASTP 305
Query: 533 APAPQNDIAXXXXXXXXXXXXXXXXXXXXXXXXXLNTTHLVLAQFDKVTRTKSRWKCTLK 354
A QND A LNT HLVLAQFDKVTRTKSRWKC LK
Sbjct: 306 AVVTQND-AAEDDDDEPLNENDDDELDDVDQGEELNTQHLVLAQFDKVTRTKSRWKCALK 364
Query: 353 DGIMHINNKDILFNKATGEFDF 288
DGIMHINNKDILFNKATGEFDF
Sbjct: 365 DGIMHINNKDILFNKATGEFDF 386
>ref|XP_011080825.1| PREDICTED: transcription initiation factor IIA large subunit-like
[Sesamum indicum]
Length = 410
Score = 246 bits (627), Expect = 2e-62
Identities = 133/199 (66%), Positives = 141/199 (70%)
Frame = -1
Query: 884 QDFFTMPSGKRKREDFPSQQHTGGYIPQQDGAGDIISDDIKVDQGSSSQHVLVNATRQMV 705
QDFF + SGKRKR+D P Q GGYIPQQDGAGD ISD+ D S + V+ +QM
Sbjct: 218 QDFF-ISSGKRKRDDLPPQYRAGGYIPQQDGAGDNISDE---DNRSQNLKVVQGGNQQMF 273
Query: 704 VQREGLSSRIPQLDGPIPDPYDDVLSTPNIYNYQGVANEDYNIVNTPAPHEMQAPTPAPA 525
Q +SSRIPQLDGPIPDPYDDVLSTPNIYNYQGV NEDYNIVNTP P+EM A TPAP
Sbjct: 274 FQVGTMSSRIPQLDGPIPDPYDDVLSTPNIYNYQGVVNEDYNIVNTPMPNEMHAATPAPV 333
Query: 524 PQNDIAXXXXXXXXXXXXXXXXXXXXXXXXXLNTTHLVLAQFDKVTRTKSRWKCTLKDGI 345
QND LNTTHLVLAQFDKVTRTKSRWKCTLKDGI
Sbjct: 334 -QND-TGDDDDDEPLNEDDDDDLDDVDQGEDLNTTHLVLAQFDKVTRTKSRWKCTLKDGI 391
Query: 344 MHINNKDILFNKATGEFDF 288
MHINNKDILFNKATGEFDF
Sbjct: 392 MHINNKDILFNKATGEFDF 410
>ref|XP_006424899.1| hypothetical protein CICLE_v10028561mg [Citrus clementina]
gi|568870376|ref|XP_006488381.1| PREDICTED:
transcription initiation factor IIA subunit 1-like
[Citrus sinensis] gi|557526833|gb|ESR38139.1|
hypothetical protein CICLE_v10028561mg [Citrus
clementina]
Length = 406
Score = 246 bits (627), Expect = 2e-62
Identities = 128/202 (63%), Positives = 143/202 (70%), Gaps = 3/202 (1%)
Frame = -1
Query: 884 QDFFTMPSGKRKREDFPSQQHTGGY-IPQQDGAGDIISD--DIKVDQGSSSQHVLVNATR 714
QDFFTM +GKRKREDFP+Q H GGY IPQQDGAGD + + +++V + Q + A R
Sbjct: 206 QDFFTMSAGKRKREDFPAQYHNGGYNIPQQDGAGDAMPEIFELEVSEFPGRQDSVTTANR 265
Query: 713 QMVVQREGLSSRIPQLDGPIPDPYDDVLSTPNIYNYQGVANEDYNIVNTPAPHEMQAPTP 534
++ S +IPQLDGPIPDPYDDVLSTPNIYNYQGV NEDYNIVNTPAP+++QA TP
Sbjct: 266 EIFANLASSSVKIPQLDGPIPDPYDDVLSTPNIYNYQGVVNEDYNIVNTPAPNDIQASTP 325
Query: 533 APAPQNDIAXXXXXXXXXXXXXXXXXXXXXXXXXLNTTHLVLAQFDKVTRTKSRWKCTLK 354
A QND A LNT HLVLAQFDKVTRTKSRWKC LK
Sbjct: 326 AVVTQND-AAEDDDDEPLNENDDDELDDVDQGEELNTQHLVLAQFDKVTRTKSRWKCALK 384
Query: 353 DGIMHINNKDILFNKATGEFDF 288
DGIMHINNKDILFNKATGEFDF
Sbjct: 385 DGIMHINNKDILFNKATGEFDF 406
>ref|XP_007016334.1| Transcription initiation factor IIA subunit 1 [Theobroma cacao]
gi|508786697|gb|EOY33953.1| Transcription initiation
factor IIA subunit 1 [Theobroma cacao]
Length = 393
Score = 246 bits (627), Expect = 2e-62
Identities = 127/205 (61%), Positives = 140/205 (68%), Gaps = 6/205 (2%)
Frame = -1
Query: 884 QDFFTMPSGKRKREDFPSQQHTGG-YIPQQDGAGDIISDDIKVDQGSSSQHV-----LVN 723
QDFF M SGKRKREDF +Q H GG YIPQQDGAGD I + K + S +
Sbjct: 189 QDFFMMSSGKRKREDFTTQYHNGGGYIPQQDGAGDAIYEVAKAEGSKGSDFLDRRDSTTT 248
Query: 722 ATRQMVVQREGLSSRIPQLDGPIPDPYDDVLSTPNIYNYQGVANEDYNIVNTPAPHEMQA 543
A +++ SS+IPQLDGPIPDPYDD+LSTPNIYNYQGV NEDYN+VNTPAP+++QA
Sbjct: 249 AKSEILAHLARSSSKIPQLDGPIPDPYDDMLSTPNIYNYQGVVNEDYNVVNTPAPNDLQA 308
Query: 542 PTPAPAPQNDIAXXXXXXXXXXXXXXXXXXXXXXXXXLNTTHLVLAQFDKVTRTKSRWKC 363
TPAP QND LNT HLVLAQFDKVTRTKSRWKC
Sbjct: 309 ATPAPVAQNDTGDDDDDEPLNEDDDDDELDDVDQGEELNTQHLVLAQFDKVTRTKSRWKC 368
Query: 362 TLKDGIMHINNKDILFNKATGEFDF 288
TLKDGIMHINNKDILFNKATGEFDF
Sbjct: 369 TLKDGIMHINNKDILFNKATGEFDF 393
>ref|XP_012066966.1| PREDICTED: transcription initiation factor IIA large subunit
[Jatropha curcas] gi|643735683|gb|KDP42211.1|
hypothetical protein JCGZ_02941 [Jatropha curcas]
Length = 407
Score = 244 bits (623), Expect = 6e-62
Identities = 128/211 (60%), Positives = 147/211 (69%), Gaps = 12/211 (5%)
Frame = -1
Query: 884 QDFFTMPSGKRKREDFPSQQHTGGYIPQQDGAGDIISDDIKVDQGSSSQ----------- 738
QDFF M SGKRKREDF +Q + GG+IPQQDGAGD+ S+ ++ QG+ S
Sbjct: 205 QDFFMMSSGKRKREDFATQFNNGGFIPQQDGAGDVPSEALQASQGNGSLGRCDTITSANI 264
Query: 737 HVLVNATRQMVVQREGLSSRIPQLDGPIPDPYDDVLSTPNIYNYQGVANEDYNIVNTPAP 558
+L +ATR+++ +IPQLDGPIPDPYDDVLSTPNIYNYQGV NEDYNI NTPAP
Sbjct: 265 EILSHATRRVL--------KIPQLDGPIPDPYDDVLSTPNIYNYQGVVNEDYNIANTPAP 316
Query: 557 HEMQAPTPAPAPQND-IAXXXXXXXXXXXXXXXXXXXXXXXXXLNTTHLVLAQFDKVTRT 381
+++QA TPA APQND + +NT HLVLAQFDKVTRT
Sbjct: 317 NDIQASTPAVAPQNDAVDDDDDEPLNEDDDDDDDLDDVEQGEDMNTQHLVLAQFDKVTRT 376
Query: 380 KSRWKCTLKDGIMHINNKDILFNKATGEFDF 288
KSRWKCTLKDGIMHINNKDILFNKATGEFDF
Sbjct: 377 KSRWKCTLKDGIMHINNKDILFNKATGEFDF 407
>gb|KJB08915.1| hypothetical protein B456_001G112500 [Gossypium raimondii]
Length = 275
Score = 241 bits (616), Expect = 4e-61
Identities = 127/205 (61%), Positives = 141/205 (68%), Gaps = 6/205 (2%)
Frame = -1
Query: 884 QDFFTMPSGKRKREDFPSQQHTGGYIPQQDGAGDIISDDIKVDQGSSS-----QHVLVNA 720
QDFF M SGKRKREDF +Q GGYIPQQDGAGD S+ K + +H A
Sbjct: 72 QDFFMMSSGKRKREDF-AQYQNGGYIPQQDGAGDATSEVAKAEGSRGGNFLDRRHSTTTA 130
Query: 719 TRQMVVQREGLSSRIPQLDGPIPDPYDDVLSTPNIYNYQGVANEDYNIVNTPAPHEMQAP 540
+ + + SS+IPQLDGPIPD Y+D+LSTPNIYNYQGV NEDYN+VNTPAP+++QA
Sbjct: 131 KSKFLAELARSSSKIPQLDGPIPDSYEDMLSTPNIYNYQGVVNEDYNVVNTPAPNDLQAS 190
Query: 539 TPAPAPQNDIA-XXXXXXXXXXXXXXXXXXXXXXXXXLNTTHLVLAQFDKVTRTKSRWKC 363
TPAPAPQNDI LNT HLVLAQFDKVTRTKSRWKC
Sbjct: 191 TPAPAPQNDIVDDDDDEPLNEDDDDEDDLDDVDQGEELNTQHLVLAQFDKVTRTKSRWKC 250
Query: 362 TLKDGIMHINNKDILFNKATGEFDF 288
TLKDGIMHINNKDILFNKATGEFDF
Sbjct: 251 TLKDGIMHINNKDILFNKATGEFDF 275
>ref|XP_012475136.1| PREDICTED: transcription initiation factor IIA large subunit-like
[Gossypium raimondii] gi|763741415|gb|KJB08914.1|
hypothetical protein B456_001G112500 [Gossypium
raimondii]
Length = 391
Score = 241 bits (616), Expect = 4e-61
Identities = 127/205 (61%), Positives = 141/205 (68%), Gaps = 6/205 (2%)
Frame = -1
Query: 884 QDFFTMPSGKRKREDFPSQQHTGGYIPQQDGAGDIISDDIKVDQGSSS-----QHVLVNA 720
QDFF M SGKRKREDF +Q GGYIPQQDGAGD S+ K + +H A
Sbjct: 188 QDFFMMSSGKRKREDF-AQYQNGGYIPQQDGAGDATSEVAKAEGSRGGNFLDRRHSTTTA 246
Query: 719 TRQMVVQREGLSSRIPQLDGPIPDPYDDVLSTPNIYNYQGVANEDYNIVNTPAPHEMQAP 540
+ + + SS+IPQLDGPIPD Y+D+LSTPNIYNYQGV NEDYN+VNTPAP+++QA
Sbjct: 247 KSKFLAELARSSSKIPQLDGPIPDSYEDMLSTPNIYNYQGVVNEDYNVVNTPAPNDLQAS 306
Query: 539 TPAPAPQNDIA-XXXXXXXXXXXXXXXXXXXXXXXXXLNTTHLVLAQFDKVTRTKSRWKC 363
TPAPAPQNDI LNT HLVLAQFDKVTRTKSRWKC
Sbjct: 307 TPAPAPQNDIVDDDDDEPLNEDDDDEDDLDDVDQGEELNTQHLVLAQFDKVTRTKSRWKC 366
Query: 362 TLKDGIMHINNKDILFNKATGEFDF 288
TLKDGIMHINNKDILFNKATGEFDF
Sbjct: 367 TLKDGIMHINNKDILFNKATGEFDF 391
>ref|XP_006350788.1| PREDICTED: transcription initiation factor IIA large subunit-like
[Solanum tuberosum]
Length = 403
Score = 239 bits (611), Expect = 1e-60
Identities = 129/199 (64%), Positives = 138/199 (69%)
Frame = -1
Query: 884 QDFFTMPSGKRKREDFPSQQHTGGYIPQQDGAGDIISDDIKVDQGSSSQHVLVNATRQMV 705
QDFF +GKRKREDFP Q H GGYIPQQDGA D I D++K +GS+ Q LV V
Sbjct: 213 QDFFMNSAGKRKREDFPPQYHNGGYIPQQDGAADSIYDNLKSGEGSNIQLELVT-----V 267
Query: 704 VQREGLSSRIPQLDGPIPDPYDDVLSTPNIYNYQGVANEDYNIVNTPAPHEMQAPTPAPA 525
+ + RIPQ DGPIPD YDD LSTPNIY YQGV NEDYNIVNTPAP++MQAPTPAPA
Sbjct: 268 GPVQASAYRIPQFDGPIPDSYDDALSTPNIY-YQGVVNEDYNIVNTPAPNDMQAPTPAPA 326
Query: 524 PQNDIAXXXXXXXXXXXXXXXXXXXXXXXXXLNTTHLVLAQFDKVTRTKSRWKCTLKDGI 345
QND LNT HLVLAQFDKVTRTKSRWKCTLKDGI
Sbjct: 327 LQND--DIDDDDEPLNEDDDDDLDDVDQGEDLNTAHLVLAQFDKVTRTKSRWKCTLKDGI 384
Query: 344 MHINNKDILFNKATGEFDF 288
MHINNKDILFNKA GEFDF
Sbjct: 385 MHINNKDILFNKANGEFDF 403
>ref|XP_008344833.1| PREDICTED: transcription initiation factor IIA large subunit-like
isoform X1 [Malus domestica]
Length = 387
Score = 239 bits (610), Expect = 2e-60
Identities = 122/201 (60%), Positives = 141/201 (70%), Gaps = 2/201 (0%)
Frame = -1
Query: 884 QDFFTMPSGKRKREDFPSQQHTGGYIPQQDGAGDIISD--DIKVDQGSSSQHVLVNATRQ 711
QDFF M SGKRKREDFP+Q GGY+PQQDGAGD + +I+V +GSSS + A +
Sbjct: 190 QDFFQMNSGKRKREDFPAQYQAGGYLPQQDGAGDAAPEIFEIEVSEGSSS--IASRAWSE 247
Query: 710 MVVQREGLSSRIPQLDGPIPDPYDDVLSTPNIYNYQGVANEDYNIVNTPAPHEMQAPTPA 531
M+ + + +IPQLDGPIPDPYD+ LSTPNIYNYQG NEDYN+ +TPAPH++ TPA
Sbjct: 248 MLTRVRSSTLKIPQLDGPIPDPYDE-LSTPNIYNYQGAFNEDYNVASTPAPHDIPVSTPA 306
Query: 530 PAPQNDIAXXXXXXXXXXXXXXXXXXXXXXXXXLNTTHLVLAQFDKVTRTKSRWKCTLKD 351
P QND+ LNT HLVLAQFDKVTRTKSRWKCTLKD
Sbjct: 307 PVVQNDVGDDDDDEPPLNENDDDELDDVDQGDELNTAHLVLAQFDKVTRTKSRWKCTLKD 366
Query: 350 GIMHINNKDILFNKATGEFDF 288
GIMHINNKDILFNKATGEF+F
Sbjct: 367 GIMHINNKDILFNKATGEFEF 387
>ref|XP_002520518.1| protein with unknown function [Ricinus communis]
gi|223540360|gb|EEF41931.1| protein with unknown
function [Ricinus communis]
Length = 383
Score = 239 bits (609), Expect = 2e-60
Identities = 126/202 (62%), Positives = 147/202 (72%), Gaps = 3/202 (1%)
Frame = -1
Query: 884 QDFFTMPSGKRKREDFPSQQHTGGYIPQQDGAGDIISDDIKVDQGSSSQHVLVNATRQMV 705
QDFFT SGKRKREDF +Q + GG+IPQQDGAGD + ++V++ + +++A +++
Sbjct: 189 QDFFTGASGKRKREDFAAQYNNGGFIPQQDGAGDTPFEVLQVERDT-----VISADIEIL 243
Query: 704 --VQREGLSSRIPQLDGPIPDPYDDVLSTPNIYNYQGVANEDYNIVNTPAPHEMQAPTPA 531
V R GL +IPQLDGPIPDPYDDVLSTPNIYNYQGVANEDYNI NTPAP+++QA TPA
Sbjct: 244 SSVTRRGL--KIPQLDGPIPDPYDDVLSTPNIYNYQGVANEDYNIANTPAPNDLQASTPA 301
Query: 530 PAPQNDIA-XXXXXXXXXXXXXXXXXXXXXXXXXLNTTHLVLAQFDKVTRTKSRWKCTLK 354
PQND+ +NT HLVLAQFDKVTRTKSRWKCTLK
Sbjct: 302 IIPQNDVVDDDDDEPLNEDDDDDDDLDDVDQGEDMNTQHLVLAQFDKVTRTKSRWKCTLK 361
Query: 353 DGIMHINNKDILFNKATGEFDF 288
DGIMHINNKDILFNKATGEFDF
Sbjct: 362 DGIMHINNKDILFNKATGEFDF 383
>ref|XP_004241212.1| PREDICTED: transcription initiation factor IIA large subunit
[Solanum lycopersicum]
Length = 401
Score = 237 bits (604), Expect = 9e-60
Identities = 128/199 (64%), Positives = 137/199 (68%)
Frame = -1
Query: 884 QDFFTMPSGKRKREDFPSQQHTGGYIPQQDGAGDIISDDIKVDQGSSSQHVLVNATRQMV 705
QDFF +GKRKREDFP Q H GGYIPQQDGA D I D+IK +GS+ Q LV V
Sbjct: 212 QDFFMNSTGKRKREDFPPQYHNGGYIPQQDGAADSIYDNIKSGEGSNIQLELVT-----V 266
Query: 704 VQREGLSSRIPQLDGPIPDPYDDVLSTPNIYNYQGVANEDYNIVNTPAPHEMQAPTPAPA 525
+ + RIPQ DGPIPD YDD LSTPNIY YQGV NEDYNIVNTPAP++MQAPTPAP
Sbjct: 267 GPVQAPAYRIPQFDGPIPDSYDDALSTPNIY-YQGVVNEDYNIVNTPAPNDMQAPTPAPL 325
Query: 524 PQNDIAXXXXXXXXXXXXXXXXXXXXXXXXXLNTTHLVLAQFDKVTRTKSRWKCTLKDGI 345
+DI LNT HLVLAQFDKVTRTKSRWKCTLKDGI
Sbjct: 326 QNDDI---DDDDEPLNEDDDDELDDVDQGEDLNTAHLVLAQFDKVTRTKSRWKCTLKDGI 382
Query: 344 MHINNKDILFNKATGEFDF 288
MHINNKDILFNKA GEFDF
Sbjct: 383 MHINNKDILFNKANGEFDF 401
>ref|XP_009364351.1| PREDICTED: transcription initiation factor IIA large subunit-like
isoform X1 [Pyrus x bretschneideri]
Length = 387
Score = 235 bits (600), Expect = 3e-59
Identities = 120/201 (59%), Positives = 140/201 (69%), Gaps = 2/201 (0%)
Frame = -1
Query: 884 QDFFTMPSGKRKREDFPSQQHTGGYIPQQDGAGDIISD--DIKVDQGSSSQHVLVNATRQ 711
QDFF M SGKRKREDFP++ GGYIPQQDGAGD + +I+V +GSSS + +
Sbjct: 190 QDFFQMNSGKRKREDFPAKYQAGGYIPQQDGAGDAAPEIFEIEVSEGSSS--IASRTWSE 247
Query: 710 MVVQREGLSSRIPQLDGPIPDPYDDVLSTPNIYNYQGVANEDYNIVNTPAPHEMQAPTPA 531
M+ + + +IPQLDGPIPDPYD+ LSTPNIYNYQG NEDYN+ +TPAPH++ TPA
Sbjct: 248 MLTRVRSSTLKIPQLDGPIPDPYDE-LSTPNIYNYQGAFNEDYNVASTPAPHDIPVSTPA 306
Query: 530 PAPQNDIAXXXXXXXXXXXXXXXXXXXXXXXXXLNTTHLVLAQFDKVTRTKSRWKCTLKD 351
P QND+ LNT HLVLAQFDKVTRTKS+WKCTLKD
Sbjct: 307 PVIQNDVGDDDDDEPPLNENDDDELDDVDQGDELNTAHLVLAQFDKVTRTKSKWKCTLKD 366
Query: 350 GIMHINNKDILFNKATGEFDF 288
GIMHINNKDILFNKATGEF+F
Sbjct: 367 GIMHINNKDILFNKATGEFEF 387
>ref|XP_009375942.1| PREDICTED: transcription initiation factor IIA large subunit [Pyrus
x bretschneideri]
Length = 387
Score = 234 bits (598), Expect = 4e-59
Identities = 114/199 (57%), Positives = 134/199 (67%)
Frame = -1
Query: 884 QDFFTMPSGKRKREDFPSQQHTGGYIPQQDGAGDIISDDIKVDQGSSSQHVLVNATRQMV 705
QDF M SGKRKREDFP+Q GG+IPQQDGAGD + +++ S + A +M+
Sbjct: 190 QDFLQMNSGKRKREDFPAQYQAGGFIPQQDGAGDAAPEKFEIEVSGGSTSIASRAWSEML 249
Query: 704 VQREGLSSRIPQLDGPIPDPYDDVLSTPNIYNYQGVANEDYNIVNTPAPHEMQAPTPAPA 525
+ + +IPQLDGPIPDPYD+ LSTPNIYNYQG NEDYN+ +TPAPH++ TPAP
Sbjct: 250 TRVRSSTPKIPQLDGPIPDPYDE-LSTPNIYNYQGTFNEDYNVASTPAPHDIPVSTPAPV 308
Query: 524 PQNDIAXXXXXXXXXXXXXXXXXXXXXXXXXLNTTHLVLAQFDKVTRTKSRWKCTLKDGI 345
QND+ LNT HLVLAQFDKVTRTKS+WKCTLKDGI
Sbjct: 309 VQNDVGDDDDDEPPLNENDDDELDDVDQGDELNTAHLVLAQFDKVTRTKSKWKCTLKDGI 368
Query: 344 MHINNKDILFNKATGEFDF 288
MHINNKD+LFNKA GEFDF
Sbjct: 369 MHINNKDVLFNKANGEFDF 387
>ref|XP_008384920.1| PREDICTED: transcription initiation factor IIA large subunit [Malus
domestica]
Length = 387
Score = 234 bits (597), Expect = 6e-59
Identities = 115/199 (57%), Positives = 134/199 (67%)
Frame = -1
Query: 884 QDFFTMPSGKRKREDFPSQQHTGGYIPQQDGAGDIISDDIKVDQGSSSQHVLVNATRQMV 705
QDF M S KRKREDFP+Q GG+IPQQDGAGD + +++ S + A +M+
Sbjct: 190 QDFLQMNSAKRKREDFPAQYQAGGFIPQQDGAGDAAPEKFEIEVSGGSTSIASRAWSEML 249
Query: 704 VQREGLSSRIPQLDGPIPDPYDDVLSTPNIYNYQGVANEDYNIVNTPAPHEMQAPTPAPA 525
+ + +IPQLDGPIPDPYD+ LSTPNIYNYQG NEDYN+ +TPAPH++ TPAP
Sbjct: 250 TRVRSSTPKIPQLDGPIPDPYDE-LSTPNIYNYQGTFNEDYNVASTPAPHDIPVSTPAPV 308
Query: 524 PQNDIAXXXXXXXXXXXXXXXXXXXXXXXXXLNTTHLVLAQFDKVTRTKSRWKCTLKDGI 345
QND+ LNT HLVLAQFDKVTRTKS+WKCTLKDGI
Sbjct: 309 VQNDLGDDDDDEPPLNENDDDELDDVDQGDELNTAHLVLAQFDKVTRTKSKWKCTLKDGI 368
Query: 344 MHINNKDILFNKATGEFDF 288
MHINNKDILFNKATGEFDF
Sbjct: 369 MHINNKDILFNKATGEFDF 387
>ref|XP_010685693.1| PREDICTED: transcription initiation factor IIA large subunit [Beta
vulgaris subsp. vulgaris] gi|870853304|gb|KMT05185.1|
hypothetical protein BVRB_7g173320 [Beta vulgaris subsp.
vulgaris]
Length = 389
Score = 234 bits (596), Expect = 7e-59
Identities = 121/200 (60%), Positives = 138/200 (69%), Gaps = 1/200 (0%)
Frame = -1
Query: 884 QDFFTMPSGKRKREDFPSQQHTGGYIPQQDGAGDIISDDIKVDQGSSSQHVLVNATRQMV 705
QDFFT P+GKRKR++FP Q GGYIPQQDGAGD D +++ S +
Sbjct: 191 QDFFTGPTGKRKRDEFPPQYQGGGYIPQQDGAGDAAGDVFELEIIQSKSLGRSGVVKVTS 250
Query: 704 VQREGLSSRIPQLDGPIPDPYDDVLSTPNIYNYQGVANEDYNIVNTPAPHEMQAPTPAPA 525
++G SSRIPQLDGPIPDPY+D+LSTPNIYNYQ V NEDYN+VNTPAP+++QA TPAP
Sbjct: 251 ALQKGSSSRIPQLDGPIPDPYEDMLSTPNIYNYQPV-NEDYNVVNTPAPNDLQAGTPAPP 309
Query: 524 PQNDIAXXXXXXXXXXXXXXXXXXXXXXXXXL-NTTHLVLAQFDKVTRTKSRWKCTLKDG 348
QND+ NT HLVLAQFDKVTRTKSRWKCTLKDG
Sbjct: 310 IQNDLGDENGDDEPPLNENDDDDLDDIDQGEELNTQHLVLAQFDKVTRTKSRWKCTLKDG 369
Query: 347 IMHINNKDILFNKATGEFDF 288
IMHINNKDILFNKA+GEFDF
Sbjct: 370 IMHINNKDILFNKASGEFDF 389
>ref|XP_009622244.1| PREDICTED: transcription initiation factor IIA large subunit
{ECO:0000250|UniProtKB:P32773,
ECO:0000312|EMBL:CAB57938.1}-like [Nicotiana
tomentosiformis]
Length = 401
Score = 232 bits (592), Expect = 2e-58
Identities = 126/199 (63%), Positives = 137/199 (68%)
Frame = -1
Query: 884 QDFFTMPSGKRKREDFPSQQHTGGYIPQQDGAGDIISDDIKVDQGSSSQHVLVNATRQMV 705
QDFF +GKRKREDF SQ + GGYIPQQDGA D I D +K +GS+ Q LV +
Sbjct: 213 QDFFMTAAGKRKREDFASQYNNGGYIPQQDGAADSIYDIMKDGEGSNIQLELVTSI---- 268
Query: 704 VQREGLSSRIPQLDGPIPDPYDDVLSTPNIYNYQGVANEDYNIVNTPAPHEMQAPTPAPA 525
+ SSRIPQ+DGP D YD+ LSTPNIY YQGV NEDYNIVNTPAP++MQAPTPAP
Sbjct: 269 ---QAASSRIPQVDGPT-DHYDEALSTPNIYGYQGVVNEDYNIVNTPAPNDMQAPTPAPV 324
Query: 524 PQNDIAXXXXXXXXXXXXXXXXXXXXXXXXXLNTTHLVLAQFDKVTRTKSRWKCTLKDGI 345
QND LNT HLVLAQFDKVTRTKSRWKCTLKDGI
Sbjct: 325 LQND--DVDDDDEPLNENDDDDFDDVDQGEDLNTAHLVLAQFDKVTRTKSRWKCTLKDGI 382
Query: 344 MHINNKDILFNKATGEFDF 288
MHINNKDILFNKATGEFDF
Sbjct: 383 MHINNKDILFNKATGEFDF 401