BLASTX nr result

ID: Forsythia22_contig00065137 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00065137
         (228 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011100319.1| PREDICTED: general transcription factor IIE ...    44   4e-07
ref|XP_007049058.1| General transcription factor IIE subunit 1 i...    44   2e-06
ref|XP_007049057.1| General transcription factor IIE subunit 1 i...    44   2e-06
ref|XP_007049059.1| General transcription factor IIE subunit 1 i...    44   2e-06

>ref|XP_011100319.1| PREDICTED: general transcription factor IIE subunit 1-like [Sesamum
           indicum]
          Length = 476

 Score = 44.3 bits (103), Expect(2) = 4e-07
 Identities = 20/34 (58%), Positives = 25/34 (73%)
 Frame = -2

Query: 107 SDIDGEVENIESDNGNKAMKVLPSWMINQGMNLT 6
           S ID + EN++S N +  MKVLP WMI +GMNLT
Sbjct: 305 SGIDQKGENVKSANSSAPMKVLPPWMIKEGMNLT 338



 Score = 36.2 bits (82), Expect(2) = 4e-07
 Identities = 20/31 (64%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
 Frame = -1

Query: 228 MDQLAIVKDLPIPEFRSFH--ELEANANGDS 142
           +DQLA VKDLP+PEF S    EL ANA G S
Sbjct: 238 IDQLARVKDLPVPEFGSLQAWELRANAAGRS 268


>ref|XP_007049058.1| General transcription factor IIE subunit 1 isoform 2 [Theobroma
           cacao] gi|508701319|gb|EOX93215.1| General transcription
           factor IIE subunit 1 isoform 2 [Theobroma cacao]
          Length = 480

 Score = 43.5 bits (101), Expect(2) = 2e-06
 Identities = 18/34 (52%), Positives = 26/34 (76%)
 Frame = -2

Query: 107 SDIDGEVENIESDNGNKAMKVLPSWMINQGMNLT 6
           S +DG+ E+ +S++   ++KVLP WMI QGMNLT
Sbjct: 309 SGLDGKEEDAKSESAGTSLKVLPPWMIKQGMNLT 342



 Score = 34.3 bits (77), Expect(2) = 2e-06
 Identities = 19/36 (52%), Positives = 22/36 (61%), Gaps = 7/36 (19%)
 Frame = -1

Query: 228 MDQLAIVKDLPIPEFRSFHELEANA-------NGDS 142
           M+QL+ VKDLP+PEF S    EA A       NGDS
Sbjct: 237 MEQLSRVKDLPVPEFGSLQAWEARASAAGRAINGDS 272


>ref|XP_007049057.1| General transcription factor IIE subunit 1 isoform 1 [Theobroma
           cacao] gi|508701318|gb|EOX93214.1| General transcription
           factor IIE subunit 1 isoform 1 [Theobroma cacao]
          Length = 475

 Score = 43.5 bits (101), Expect(2) = 2e-06
 Identities = 18/34 (52%), Positives = 26/34 (76%)
 Frame = -2

Query: 107 SDIDGEVENIESDNGNKAMKVLPSWMINQGMNLT 6
           S +DG+ E+ +S++   ++KVLP WMI QGMNLT
Sbjct: 304 SGLDGKEEDAKSESAGTSLKVLPPWMIKQGMNLT 337



 Score = 34.3 bits (77), Expect(2) = 2e-06
 Identities = 19/36 (52%), Positives = 22/36 (61%), Gaps = 7/36 (19%)
 Frame = -1

Query: 228 MDQLAIVKDLPIPEFRSFHELEANA-------NGDS 142
           M+QL+ VKDLP+PEF S    EA A       NGDS
Sbjct: 239 MEQLSRVKDLPVPEFGSLQAWEARASAAGRAINGDS 274


>ref|XP_007049059.1| General transcription factor IIE subunit 1 isoform 3 [Theobroma
           cacao] gi|508701320|gb|EOX93216.1| General transcription
           factor IIE subunit 1 isoform 3 [Theobroma cacao]
          Length = 473

 Score = 43.5 bits (101), Expect(2) = 2e-06
 Identities = 18/34 (52%), Positives = 26/34 (76%)
 Frame = -2

Query: 107 SDIDGEVENIESDNGNKAMKVLPSWMINQGMNLT 6
           S +DG+ E+ +S++   ++KVLP WMI QGMNLT
Sbjct: 302 SGLDGKEEDAKSESAGTSLKVLPPWMIKQGMNLT 335



 Score = 34.3 bits (77), Expect(2) = 2e-06
 Identities = 19/36 (52%), Positives = 22/36 (61%), Gaps = 7/36 (19%)
 Frame = -1

Query: 228 MDQLAIVKDLPIPEFRSFHELEANA-------NGDS 142
           M+QL+ VKDLP+PEF S    EA A       NGDS
Sbjct: 237 MEQLSRVKDLPVPEFGSLQAWEARASAAGRAINGDS 272


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