BLASTX nr result
ID: Forsythia22_contig00064583
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00064583
(210 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AKM98249.1| RNA polymerase beta subunit (chloroplast) [Pulsat... 69 2e-09
gb|AKM98073.1| RNA polymerase beta subunit (chloroplast) [Anemon... 69 2e-09
gb|AIZ57525.1| RNA polymerase beta subunit (chloroplast) [Clemat... 69 2e-09
gb|AGN73972.1| RNA polymerase beta subunit (chloroplast) [Aconit... 69 2e-09
ref|YP_009026873.1| RNA polymerase beta subunit (plastid) [Magno... 63 9e-08
ref|YP_007474528.1| RNA polymerase beta subunit (chloroplast) [M... 63 9e-08
ref|YP_007474362.1| RNA polymerase beta subunit (chloroplast) [M... 63 9e-08
gb|AEX98243.1| RNA polymerase beta subunit (chloroplast) [Magnol... 63 9e-08
ref|YP_006576107.1| RpoB (chloroplast) [Magnolia denudata] gi|34... 63 9e-08
ref|YP_004769706.1| RNA polymerase beta subunit [Magnolia kwangs... 63 9e-08
ref|YP_740194.1| RNA polymerase beta subunit [Liriodendron tulip... 63 9e-08
emb|CBI25208.3| unnamed protein product [Vitis vinifera] 60 7e-07
gb|AAW82495.1| RNA polymerase beta chain [Phalaenopsis aphrodite... 57 5e-06
ref|YP_006073260.1| RNA polymerase beta subunit (chloroplast) [P... 57 5e-06
>gb|AKM98249.1| RNA polymerase beta subunit (chloroplast) [Pulsatilla pratensis]
gi|844170448|gb|AKM98337.1| RNA polymerase beta subunit
(chloroplast) [Pulsatilla pratensis]
Length = 1082
Score = 68.6 bits (166), Expect = 2e-09
Identities = 31/35 (88%), Positives = 32/35 (91%)
Frame = -3
Query: 106 NGIFLINGKFKMLGDGNEGMSTIPGFNQIQFEGFC 2
NGIF INGK KML DGNEGMSTIPGF+QIQFEGFC
Sbjct: 2 NGIFSINGKLKMLRDGNEGMSTIPGFSQIQFEGFC 36
>gb|AKM98073.1| RNA polymerase beta subunit (chloroplast) [Anemone patens]
gi|844170200|gb|AKM98161.1| RNA polymerase beta subunit
(chloroplast) [Anemone patens]
gi|844170580|gb|AKM98425.1| RNA polymerase beta subunit
(chloroplast) [Pulsatilla vernalis]
gi|844170721|gb|AKM98513.1| RNA polymerase beta subunit
(chloroplast) [Pulsatilla vernalis]
Length = 1082
Score = 68.6 bits (166), Expect = 2e-09
Identities = 31/35 (88%), Positives = 32/35 (91%)
Frame = -3
Query: 106 NGIFLINGKFKMLGDGNEGMSTIPGFNQIQFEGFC 2
NGIF INGK KML DGNEGMSTIPGF+QIQFEGFC
Sbjct: 2 NGIFSINGKLKMLRDGNEGMSTIPGFSQIQFEGFC 36
>gb|AIZ57525.1| RNA polymerase beta subunit (chloroplast) [Clematis fusca var.
coreana]
Length = 1082
Score = 68.6 bits (166), Expect = 2e-09
Identities = 31/35 (88%), Positives = 32/35 (91%)
Frame = -3
Query: 106 NGIFLINGKFKMLGDGNEGMSTIPGFNQIQFEGFC 2
NGIF INGK KML DGNEGMSTIPGF+QIQFEGFC
Sbjct: 2 NGIFSINGKLKMLRDGNEGMSTIPGFSQIQFEGFC 36
>gb|AGN73972.1| RNA polymerase beta subunit (chloroplast) [Aconitum barbatum var.
puberulum]
Length = 1089
Score = 68.6 bits (166), Expect = 2e-09
Identities = 31/35 (88%), Positives = 32/35 (91%)
Frame = -3
Query: 106 NGIFLINGKFKMLGDGNEGMSTIPGFNQIQFEGFC 2
NGIF INGK KML DGNEGMSTIPGF+QIQFEGFC
Sbjct: 9 NGIFSINGKLKMLRDGNEGMSTIPGFSQIQFEGFC 43
>ref|YP_009026873.1| RNA polymerase beta subunit (plastid) [Magnolia tripetala]
gi|608608396|gb|AHW51950.1| RNA polymerase beta subunit
[Magnolia tripetala]
Length = 1079
Score = 62.8 bits (151), Expect = 9e-08
Identities = 28/33 (84%), Positives = 30/33 (90%)
Frame = -3
Query: 100 IFLINGKFKMLGDGNEGMSTIPGFNQIQFEGFC 2
+F INGK KML DGNEGMSTIPGF+QIQFEGFC
Sbjct: 1 MFSINGKLKMLRDGNEGMSTIPGFSQIQFEGFC 33
>ref|YP_007474528.1| RNA polymerase beta subunit (chloroplast) [Magnolia grandiflora]
gi|372862835|gb|AEX98911.1| RNA polymerase beta subunit
(chloroplast) [Magnolia grandiflora]
gi|372863005|gb|AEX99079.1| RNA polymerase beta subunit
(chloroplast) [Magnolia grandiflora]
Length = 1079
Score = 62.8 bits (151), Expect = 9e-08
Identities = 28/33 (84%), Positives = 30/33 (90%)
Frame = -3
Query: 100 IFLINGKFKMLGDGNEGMSTIPGFNQIQFEGFC 2
+F INGK KML DGNEGMSTIPGF+QIQFEGFC
Sbjct: 1 MFSINGKLKMLRDGNEGMSTIPGFSQIQFEGFC 33
>ref|YP_007474362.1| RNA polymerase beta subunit (chloroplast) [Magnolia officinalis]
gi|452848763|ref|YP_007474444.1| RNA polymerase beta
subunit (chloroplast) [Magnolia officinalis subsp.
biloba] gi|372862413|gb|AEX98494.1| RNA polymerase beta
subunit (chloroplast) [Magnolia officinalis]
gi|372862496|gb|AEX98576.1| RNA polymerase beta subunit
(chloroplast) [Magnolia officinalis subsp. biloba]
gi|372862581|gb|AEX98660.1| RNA polymerase beta subunit
(chloroplast) [Magnolia officinalis subsp. biloba]
gi|372862666|gb|AEX98744.1| RNA polymerase beta subunit
(chloroplast) [Magnolia officinalis subsp. biloba]
Length = 1079
Score = 62.8 bits (151), Expect = 9e-08
Identities = 28/33 (84%), Positives = 30/33 (90%)
Frame = -3
Query: 100 IFLINGKFKMLGDGNEGMSTIPGFNQIQFEGFC 2
+F INGK KML DGNEGMSTIPGF+QIQFEGFC
Sbjct: 1 MFSINGKLKMLRDGNEGMSTIPGFSQIQFEGFC 33
>gb|AEX98243.1| RNA polymerase beta subunit (chloroplast) [Magnolia liliiflora]
Length = 1079
Score = 62.8 bits (151), Expect = 9e-08
Identities = 28/33 (84%), Positives = 30/33 (90%)
Frame = -3
Query: 100 IFLINGKFKMLGDGNEGMSTIPGFNQIQFEGFC 2
+F INGK KML DGNEGMSTIPGF+QIQFEGFC
Sbjct: 1 MFSINGKLKMLRDGNEGMSTIPGFSQIQFEGFC 33
>ref|YP_006576107.1| RpoB (chloroplast) [Magnolia denudata] gi|343887531|gb|AEM65210.1|
RpoB [Magnolia denudata] gi|372862243|gb|AEX98326.1| RNA
polymerase beta subunit (chloroplast) [Magnolia
denudata]
Length = 1079
Score = 62.8 bits (151), Expect = 9e-08
Identities = 28/33 (84%), Positives = 30/33 (90%)
Frame = -3
Query: 100 IFLINGKFKMLGDGNEGMSTIPGFNQIQFEGFC 2
+F INGK KML DGNEGMSTIPGF+QIQFEGFC
Sbjct: 1 MFSINGKLKMLRDGNEGMSTIPGFSQIQFEGFC 33
>ref|YP_004769706.1| RNA polymerase beta subunit [Magnolia kwangsiensis]
gi|302424172|gb|ADL39048.1| RNA polymerase beta subunit
[Magnolia kwangsiensis]
Length = 1079
Score = 62.8 bits (151), Expect = 9e-08
Identities = 28/33 (84%), Positives = 30/33 (90%)
Frame = -3
Query: 100 IFLINGKFKMLGDGNEGMSTIPGFNQIQFEGFC 2
+F INGK KML DGNEGMSTIPGF+QIQFEGFC
Sbjct: 1 MFSINGKLKMLRDGNEGMSTIPGFSQIQFEGFC 33
>ref|YP_740194.1| RNA polymerase beta subunit [Liriodendron tulipifera]
gi|113200986|gb|ABI32501.1| RNA polymerase beta subunit
[Liriodendron tulipifera]
Length = 1079
Score = 62.8 bits (151), Expect = 9e-08
Identities = 28/33 (84%), Positives = 30/33 (90%)
Frame = -3
Query: 100 IFLINGKFKMLGDGNEGMSTIPGFNQIQFEGFC 2
+F INGK KML DGNEGMSTIPGF+QIQFEGFC
Sbjct: 1 MFSINGKLKMLRDGNEGMSTIPGFSQIQFEGFC 33
>emb|CBI25208.3| unnamed protein product [Vitis vinifera]
Length = 161
Score = 59.7 bits (143), Expect = 7e-07
Identities = 28/36 (77%), Positives = 31/36 (86%)
Frame = +2
Query: 2 TKSFKLYLIKSRYCRHSLISIPEHFEFPIYQKNPII 109
TKSFKL LIK ++CRHSLIS EHF FPIY+KNPII
Sbjct: 88 TKSFKLDLIKPKHCRHSLISTLEHFLFPIYRKNPII 123
>gb|AAW82495.1| RNA polymerase beta chain [Phalaenopsis aphrodite subsp. formosana]
Length = 1091
Score = 57.0 bits (136), Expect = 5e-06
Identities = 29/42 (69%), Positives = 32/42 (76%), Gaps = 2/42 (4%)
Frame = -3
Query: 121 EECTNNGIFLINGKF--KMLGDGNEGMSTIPGFNQIQFEGFC 2
E +NGIF I K KML +GNEGMSTIPGF+QIQFEGFC
Sbjct: 4 EPKADNGIFSIKRKLQIKMLQNGNEGMSTIPGFSQIQFEGFC 45
>ref|YP_006073260.1| RNA polymerase beta subunit (chloroplast) [Phalaenopsis equestris]
gi|329668864|gb|AEB96311.1| RNA polymerase beta subunit
(chloroplast) [Phalaenopsis equestris]
Length = 1091
Score = 57.0 bits (136), Expect = 5e-06
Identities = 29/42 (69%), Positives = 32/42 (76%), Gaps = 2/42 (4%)
Frame = -3
Query: 121 EECTNNGIFLINGKF--KMLGDGNEGMSTIPGFNQIQFEGFC 2
E +NGIF I K KML +GNEGMSTIPGF+QIQFEGFC
Sbjct: 4 EPKADNGIFSIKRKLQIKMLQNGNEGMSTIPGFSQIQFEGFC 45