BLASTX nr result

ID: Forsythia22_contig00062432 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00062432
         (300 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP02363.1| unnamed protein product [Coffea canephora]             62   1e-07
ref|XP_011099068.1| PREDICTED: pentatricopeptide repeat-containi...    57   5e-06

>emb|CDP02363.1| unnamed protein product [Coffea canephora]
          Length = 881

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 32/61 (52%), Positives = 41/61 (67%)
 Frame = -3

Query: 184 CLTSRFLFLPKPPFHNFTSVSIFKISTDTQATQAPSIYRKTFSHIFQECSSQRALEPGKQ 5
           C T RFL   KP F ++ ++  F IST +    AP+ Y KTFSHIFQECS +RAL+PG Q
Sbjct: 6   CRTRRFLVPTKPSFSSYLALYTFPISTVSAV--APANYWKTFSHIFQECSKERALDPGMQ 63

Query: 4   A 2
           +
Sbjct: 64  S 64


>ref|XP_011099068.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02330
           [Sesamum indicum]
          Length = 888

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 34/68 (50%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
 Frame = -3

Query: 196 MASRCLTSRFLFLPKPPFHNFTS---VSIFKISTDTQATQAPSIYRKTFSHIFQECSSQR 26
           MA+  LT  F     P F NF     V    IST  Q  Q+   Y+KTFSHIFQECS+ R
Sbjct: 1   MAAYFLTRLFDLQLHPRFPNFLPNLPVCFCSISTFAQRNQSSPFYKKTFSHIFQECSNGR 60

Query: 25  ALEPGKQA 2
           AL PG+QA
Sbjct: 61  ALGPGRQA 68


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