BLASTX nr result

ID: Forsythia22_contig00062073 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00062073
         (699 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009611980.1| PREDICTED: zinc finger CCCH domain-containin...    74   6e-11
ref|XP_009778845.1| PREDICTED: zinc finger CCCH domain-containin...    65   3e-08

>ref|XP_009611980.1| PREDICTED: zinc finger CCCH domain-containing protein 68 [Nicotiana
            tomentosiformis]
          Length = 725

 Score = 74.3 bits (181), Expect = 6e-11
 Identities = 72/216 (33%), Positives = 102/216 (47%), Gaps = 21/216 (9%)
 Frame = -2

Query: 695  AKMIN--RMINKYGSHDVVGIKPVAPLIPSTSKPN-EVIEKLVNKYIGHDNAA---ILKS 534
            +K++N  R     G+ D+ G KP   L+  TS  N E I+KL+N+Y   DN      + S
Sbjct: 518  SKLVNEQRTSAHVGTADIRGSKP---LVHPTSDLNLEKIKKLINEYGAPDNIGGKPFVNS 574

Query: 533  HMVASPI---ANLETLMESDLQTKALTGTVGRYP-FPSVTKGHSAPLANDIDYCKSLIRQ 366
             +V S +   A     M+ +LQ K+ +   G    F S++    APL  DI+Y KSLI+Q
Sbjct: 575  ELVPSLVSSRAKCPIAMQPELQIKSYSSNTGHTSSFSSMSS--PAPLHKDINYYKSLIKQ 632

Query: 365  HGETHVNEEHKLSKIGQPRKYLQGLEFARNTK-FELDLNYQ-------MPSMYLNG---P 219
            HGE     + ++ +   P    QG E   N K  +  LN+Q        P   LNG   P
Sbjct: 633  HGENREYVDQEILQNINPYGNTQGPESFNNLKQNQACLNFQKHCVFFNTPKGCLNGTTCP 692

Query: 218  YQHRTSQSWSRPGGAVYSHVRPGGLVETPLAKRMKL 111
            + H  S+ W           R GG++E P  KRMKL
Sbjct: 693  FLHDMSKQW-----------RSGGMLEAPAPKRMKL 717


>ref|XP_009778845.1| PREDICTED: zinc finger CCCH domain-containing protein 45-like
            [Nicotiana sylvestris]
          Length = 729

 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 65/203 (32%), Positives = 98/203 (48%), Gaps = 19/203 (9%)
 Frame = -2

Query: 662  GSHDVVGIKPVAPLIPSTSKPN-EVIEKLVNKYIGHD---NAAILKSHMVASPI---ANL 504
            G+ D+ G KP   L+  TS  N E+I+KL+N+Y   D       + S +V S +   A  
Sbjct: 536  GTADINGSKP---LVHPTSDLNLEMIKKLINEYGAPDYIEGKPFVNSELVPSLVSSRAKF 592

Query: 503  ETLMESDLQTKALTGTVG-RYPFPSVTKGHSAPLANDIDYCKSLIRQHGETHVNEEHKLS 327
                + +LQ K+ +   G   PF ++T  ++APL  DI+Y KSLI+QHGE   + + ++ 
Sbjct: 593  PVATQPELQIKSYSSNTGLTSPFSTMT--NAAPLHKDINYYKSLIKQHGENRESVDCEIL 650

Query: 326  KIGQPRKYLQGLEFARNTK-FELDLNYQ-------MPSMYLNG---PYQHRTSQSWSRPG 180
            +   P    +G E  +  K  +  LN+Q        P   LNG   P+ H  S+ W    
Sbjct: 651  QNINPYGN-RGPESLKKLKPNQASLNFQKHCVFFNTPRGCLNGTTCPFLHDMSKQW---- 705

Query: 179  GAVYSHVRPGGLVETPLAKRMKL 111
                   R G ++E P  KRMKL
Sbjct: 706  -------RSGEMLEAPAPKRMKL 721


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