BLASTX nr result

ID: Forsythia22_contig00061754 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00061754
         (214 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP07067.1| unnamed protein product [Coffea canephora]             76   1e-11
ref|XP_006359568.1| PREDICTED: pentatricopeptide repeat-containi...    63   7e-08

>emb|CDP07067.1| unnamed protein product [Coffea canephora]
          Length = 544

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 42/68 (61%), Positives = 49/68 (72%), Gaps = 3/68 (4%)
 Frame = -2

Query: 195 MSIQKFVQNLKTVKGYQIQTPYINPKSKIGDTIITKILISSNSQPIP---NALLSKLTPR 25
           MS+QK +QNL+TVK  Q+  P  NPK+KI DTII+ ILI+S  QPIP     LLSKLT  
Sbjct: 1   MSLQKLLQNLRTVKKCQLPNPSQNPKAKIADTIISAILITSTFQPIPATTTNLLSKLTSN 60

Query: 24  LVHLILSD 1
            VHLILSD
Sbjct: 61  FVHLILSD 68


>ref|XP_006359568.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g28050-like [Solanum tuberosum]
          Length = 522

 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 34/65 (52%), Positives = 46/65 (70%)
 Frame = -2

Query: 195 MSIQKFVQNLKTVKGYQIQTPYINPKSKIGDTIITKILISSNSQPIPNALLSKLTPRLVH 16
           MS+QK +QNL+T+K +QI  P ++P++KI DTII  +L  S     P+ LLS LTP L+ 
Sbjct: 1   MSLQKVLQNLRTLKKWQIPNPSLHPRAKIADTIINTVL--SPIVIAPSTLLSNLTPNLIL 58

Query: 15  LILSD 1
           LILSD
Sbjct: 59  LILSD 63


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