BLASTX nr result
ID: Forsythia22_contig00061744
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00061744
(446 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_009127829.1| hypothetical chloroplast RF19 (chloroplast) ... 62 1e-07
gb|AEK71451.1| hypothetical chloroplast RF1, partial [Celtis occ... 62 1e-07
ref|YP_008965575.1| hypothetical chloroplast RF19 [Conopholis am... 62 1e-07
gb|AGS12726.1| Ycf1, partial (chloroplast) [Bonnetia sessilis] 62 1e-07
gb|AGS12732.1| Ycf1, partial (chloroplast) [Clusia rosea] 62 2e-07
gb|AFU96764.1| Ycf1, partial (chloroplast) [Mammea americana] 62 2e-07
gb|AFU96760.1| Ycf1, partial (chloroplast) [Garcinia mangostana] 62 2e-07
gb|AFU96754.1| Ycf1, partial (chloroplast) [Clusia rosea] 62 2e-07
ref|YP_009143611.1| hypothetical chloroplast RF1 (chloroplast) [... 61 3e-07
gb|AKC99913.1| Ycf1 (chloroplast) [Prunus subhirtella var. subhi... 61 3e-07
gb|AKC99826.1| Ycf1 (chloroplast) [Prunus serrulata var. spontanea] 61 3e-07
ref|YP_009136536.1| Ycf1 (chloroplast) [Prunus padus] gi|8081784... 61 3e-07
ref|YP_009136452.1| Ycf1 (chloroplast) [Prunus maximowiczii] gi|... 61 3e-07
ref|YP_009136368.1| Ycf1 (chloroplast) [Prunus yedoensis] gi|808... 61 3e-07
ref|YP_009123118.1| hypothetical chloroplast RF19 (chloroplast) ... 61 3e-07
ref|YP_009110660.1| Ycf1 protein (chloroplast) [Hesperelaea palm... 61 3e-07
ref|YP_009110648.1| Ycf1 protein (chloroplast) [Hesperelaea palm... 61 3e-07
ref|XP_008224000.1| PREDICTED: LOW QUALITY PROTEIN: putative mem... 61 3e-07
ref|YP_003359405.1| Ycf1 (chloroplast) [Olea europaea] gi|330850... 61 3e-07
gb|ACY07934.1| Ycf1 [Cynomorium songaricum] 61 3e-07
>ref|YP_009127829.1| hypothetical chloroplast RF19 (chloroplast) [Robinia pseudoacacia]
Length = 1778
Score = 62.4 bits (150), Expect = 1e-07
Identities = 29/40 (72%), Positives = 33/40 (82%)
Frame = -1
Query: 215 EDKISATTNFITGRFIKSISIYYVSLHLALGRPHTITALT 96
E K+SATT FITG+ + ISIYYV LHLALGRPHTIT +T
Sbjct: 55 EKKVSATTGFITGQLMMFISIYYVPLHLALGRPHTITVIT 94
>gb|AEK71451.1| hypothetical chloroplast RF1, partial [Celtis occidentalis]
Length = 249
Score = 62.4 bits (150), Expect = 1e-07
Identities = 29/39 (74%), Positives = 33/39 (84%)
Frame = -1
Query: 215 EDKISATTNFITGRFIKSISIYYVSLHLALGRPHTITAL 99
E+K+SATT FITG+ + ISIYYV LHLALGRPHTIT L
Sbjct: 58 EEKVSATTGFITGQLMMFISIYYVPLHLALGRPHTITVL 96
>ref|YP_008965575.1| hypothetical chloroplast RF19 [Conopholis americana]
gi|566553785|emb|CDI02768.1| hypothetical chloroplast
RF19 [Conopholis americana]
Length = 1784
Score = 62.0 bits (149), Expect = 1e-07
Identities = 29/39 (74%), Positives = 32/39 (82%)
Frame = -1
Query: 215 EDKISATTNFITGRFIKSISIYYVSLHLALGRPHTITAL 99
E K+SATT FITG+ + ISIYY LHLALGRPHTITAL
Sbjct: 60 EKKVSATTGFITGQLVMFISIYYAPLHLALGRPHTITAL 98
>gb|AGS12726.1| Ycf1, partial (chloroplast) [Bonnetia sessilis]
Length = 127
Score = 62.0 bits (149), Expect = 1e-07
Identities = 30/41 (73%), Positives = 32/41 (78%)
Frame = -1
Query: 221 REEDKISATTNFITGRFIKSISIYYVSLHLALGRPHTITAL 99
R E KISATT FITG+ + ISIYY LHLALGRPHTIT L
Sbjct: 57 RSEKKISATTGFITGQLMMFISIYYAPLHLALGRPHTITVL 97
>gb|AGS12732.1| Ycf1, partial (chloroplast) [Clusia rosea]
Length = 256
Score = 61.6 bits (148), Expect = 2e-07
Identities = 29/41 (70%), Positives = 32/41 (78%)
Frame = -1
Query: 221 REEDKISATTNFITGRFIKSISIYYVSLHLALGRPHTITAL 99
R E K+SATT FITG+ + ISIYY LHLALGRPHTIT L
Sbjct: 57 RSEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVL 97
>gb|AFU96764.1| Ycf1, partial (chloroplast) [Mammea americana]
Length = 977
Score = 61.6 bits (148), Expect = 2e-07
Identities = 29/41 (70%), Positives = 32/41 (78%)
Frame = -1
Query: 221 REEDKISATTNFITGRFIKSISIYYVSLHLALGRPHTITAL 99
R E K+SATT FITG+ + ISIYY LHLALGRPHTIT L
Sbjct: 55 RSEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVL 95
>gb|AFU96760.1| Ycf1, partial (chloroplast) [Garcinia mangostana]
Length = 977
Score = 61.6 bits (148), Expect = 2e-07
Identities = 29/41 (70%), Positives = 32/41 (78%)
Frame = -1
Query: 221 REEDKISATTNFITGRFIKSISIYYVSLHLALGRPHTITAL 99
R E K+SATT FITG+ + ISIYY LHLALGRPHTIT L
Sbjct: 55 RSEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVL 95
>gb|AFU96754.1| Ycf1, partial (chloroplast) [Clusia rosea]
Length = 977
Score = 61.6 bits (148), Expect = 2e-07
Identities = 29/41 (70%), Positives = 32/41 (78%)
Frame = -1
Query: 221 REEDKISATTNFITGRFIKSISIYYVSLHLALGRPHTITAL 99
R E K+SATT FITG+ + ISIYY LHLALGRPHTIT L
Sbjct: 55 RSEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVL 95
>ref|YP_009143611.1| hypothetical chloroplast RF1 (chloroplast) [Cannabis sativa]
gi|828348810|gb|AKK32264.1| hypothetical chloroplast RF1
(chloroplast) [Cannabis sativa]
Length = 1878
Score = 61.2 bits (147), Expect = 3e-07
Identities = 29/39 (74%), Positives = 32/39 (82%)
Frame = -1
Query: 215 EDKISATTNFITGRFIKSISIYYVSLHLALGRPHTITAL 99
E K+SATT FITG+ + ISIYYV LHLALGRPHTIT L
Sbjct: 58 EKKVSATTGFITGQLMMFISIYYVPLHLALGRPHTITVL 96
>gb|AKC99913.1| Ycf1 (chloroplast) [Prunus subhirtella var. subhirtella]
Length = 1866
Score = 61.2 bits (147), Expect = 3e-07
Identities = 29/39 (74%), Positives = 32/39 (82%)
Frame = -1
Query: 215 EDKISATTNFITGRFIKSISIYYVSLHLALGRPHTITAL 99
E K+SATT FITG+ + ISIYYV LHLALGRPHTIT L
Sbjct: 58 EKKVSATTGFITGQLMMFISIYYVPLHLALGRPHTITVL 96
>gb|AKC99826.1| Ycf1 (chloroplast) [Prunus serrulata var. spontanea]
Length = 1868
Score = 61.2 bits (147), Expect = 3e-07
Identities = 29/39 (74%), Positives = 32/39 (82%)
Frame = -1
Query: 215 EDKISATTNFITGRFIKSISIYYVSLHLALGRPHTITAL 99
E K+SATT FITG+ + ISIYYV LHLALGRPHTIT L
Sbjct: 58 EKKVSATTGFITGQLMMFISIYYVPLHLALGRPHTITVL 96
>ref|YP_009136536.1| Ycf1 (chloroplast) [Prunus padus] gi|808178411|gb|AKC99741.1| Ycf1
(chloroplast) [Prunus padus]
Length = 1867
Score = 61.2 bits (147), Expect = 3e-07
Identities = 29/39 (74%), Positives = 32/39 (82%)
Frame = -1
Query: 215 EDKISATTNFITGRFIKSISIYYVSLHLALGRPHTITAL 99
E K+SATT FITG+ + ISIYYV LHLALGRPHTIT L
Sbjct: 58 EKKVSATTGFITGQLMMFISIYYVPLHLALGRPHTITVL 96
>ref|YP_009136452.1| Ycf1 (chloroplast) [Prunus maximowiczii]
gi|808178327|gb|AKC99658.1| Ycf1 (chloroplast) [Prunus
maximowiczii]
Length = 1868
Score = 61.2 bits (147), Expect = 3e-07
Identities = 29/39 (74%), Positives = 32/39 (82%)
Frame = -1
Query: 215 EDKISATTNFITGRFIKSISIYYVSLHLALGRPHTITAL 99
E K+SATT FITG+ + ISIYYV LHLALGRPHTIT L
Sbjct: 58 EKKVSATTGFITGQLMMFISIYYVPLHLALGRPHTITVL 96
>ref|YP_009136368.1| Ycf1 (chloroplast) [Prunus yedoensis] gi|808178250|gb|AKC99582.1|
Ycf1 (chloroplast) [Prunus yedoensis]
gi|808178667|gb|AKC99994.1| Ycf1 (chloroplast) [Prunus
subhirtella var. subhirtella]
Length = 1866
Score = 61.2 bits (147), Expect = 3e-07
Identities = 29/39 (74%), Positives = 32/39 (82%)
Frame = -1
Query: 215 EDKISATTNFITGRFIKSISIYYVSLHLALGRPHTITAL 99
E K+SATT FITG+ + ISIYYV LHLALGRPHTIT L
Sbjct: 58 EKKVSATTGFITGQLMMFISIYYVPLHLALGRPHTITVL 96
>ref|YP_009123118.1| hypothetical chloroplast RF19 (chloroplast) [Cannabis sativa]
gi|836692049|ref|YP_009143599.1| hypothetical
chloroplast RF1 (chloroplast) [Cannabis sativa]
gi|756142257|gb|AJK91467.1| hypothetical chloroplast
RF19 (chloroplast) [Cannabis sativa]
gi|828348838|gb|AKK32292.1| hypothetical chloroplast RF1
(chloroplast) [Cannabis sativa]
Length = 356
Score = 61.2 bits (147), Expect = 3e-07
Identities = 29/39 (74%), Positives = 32/39 (82%)
Frame = -1
Query: 215 EDKISATTNFITGRFIKSISIYYVSLHLALGRPHTITAL 99
E K+SATT FITG+ + ISIYYV LHLALGRPHTIT L
Sbjct: 58 EKKVSATTGFITGQLMMFISIYYVPLHLALGRPHTITVL 96
>ref|YP_009110660.1| Ycf1 protein (chloroplast) [Hesperelaea palmeri]
gi|725798344|emb|CED79820.1| Ycf1 protein (chloroplast)
[Hesperelaea palmeri]
Length = 1876
Score = 61.2 bits (147), Expect = 3e-07
Identities = 29/39 (74%), Positives = 32/39 (82%)
Frame = -1
Query: 215 EDKISATTNFITGRFIKSISIYYVSLHLALGRPHTITAL 99
E K+SATT FITG+ + ISIYY LHLALGRPHTITAL
Sbjct: 55 EKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITAL 93
>ref|YP_009110648.1| Ycf1 protein (chloroplast) [Hesperelaea palmeri]
gi|725798332|emb|CED79808.1| Ycf1 protein (chloroplast)
[Hesperelaea palmeri]
Length = 387
Score = 61.2 bits (147), Expect = 3e-07
Identities = 29/39 (74%), Positives = 32/39 (82%)
Frame = -1
Query: 215 EDKISATTNFITGRFIKSISIYYVSLHLALGRPHTITAL 99
E K+SATT FITG+ + ISIYY LHLALGRPHTITAL
Sbjct: 55 EKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITAL 93
>ref|XP_008224000.1| PREDICTED: LOW QUALITY PROTEIN: putative membrane protein ycf1
[Prunus mume]
Length = 1878
Score = 61.2 bits (147), Expect = 3e-07
Identities = 29/39 (74%), Positives = 32/39 (82%)
Frame = -1
Query: 215 EDKISATTNFITGRFIKSISIYYVSLHLALGRPHTITAL 99
E K+SATT FITG+ + ISIYYV LHLALGRPHTIT L
Sbjct: 58 EKKVSATTGFITGQLMMFISIYYVPLHLALGRPHTITVL 96
>ref|YP_003359405.1| Ycf1 (chloroplast) [Olea europaea] gi|330850789|ref|YP_004376467.1|
Ycf1 protein [Olea europaea subsp. europaea]
gi|334700328|ref|YP_004563827.1| Ycf1 protein [Olea
europaea subsp. cuspidata]
gi|334701934|ref|YP_004564543.1| Ycf1 protein [Olea
europaea subsp. maroccana] gi|281428733|gb|ADA69972.1|
Ycf1 (chloroplast) [Olea europaea]
gi|328795479|emb|CBR30361.1| Ycf1 protein [Olea europaea
subsp. europaea] gi|334084447|emb|CBR23877.1| Ycf1
protein [Olea europaea subsp. cuspidata]
gi|334084533|emb|CBR24671.1| Ycf1 protein [Olea europaea
subsp. europaea] gi|334084619|emb|CBR30454.1| Ycf1
protein [Olea europaea subsp. europaea]
gi|334084910|emb|CBS29295.1| Ycf1 protein [Olea europaea
subsp. maroccana] gi|334084996|emb|CBJ04344.1| Ycf1
protein [Olea europaea subsp. cuspidata]
gi|334085082|emb|CBR23785.1| Ycf1 protein [Olea europaea
subsp. cuspidata] gi|510934450|emb|CCQ09148.1| Ycf1
protein (chloroplast) [Olea europaea subsp. europaea]
Length = 387
Score = 61.2 bits (147), Expect = 3e-07
Identities = 29/39 (74%), Positives = 32/39 (82%)
Frame = -1
Query: 215 EDKISATTNFITGRFIKSISIYYVSLHLALGRPHTITAL 99
E K+SATT FITG+ + ISIYY LHLALGRPHTITAL
Sbjct: 55 EKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITAL 93
>gb|ACY07934.1| Ycf1 [Cynomorium songaricum]
Length = 286
Score = 61.2 bits (147), Expect = 3e-07
Identities = 29/39 (74%), Positives = 32/39 (82%)
Frame = -1
Query: 215 EDKISATTNFITGRFIKSISIYYVSLHLALGRPHTITAL 99
E K+SATT FITG+ + ISIYYV LHLALGRPHTIT L
Sbjct: 58 EKKVSATTGFITGQLMMFISIYYVPLHLALGRPHTITVL 96