BLASTX nr result
ID: Forsythia22_contig00061603
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00061603
(327 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_009110592.1| RNA polymerase beta'' chain (chloroplast) [H... 119 6e-31
ref|YP_004563771.1| RNA polymerase beta'' chain [Olea europaea s... 119 6e-31
ref|YP_004563994.1| RNA polymerase beta'' chain [Olea woodiana s... 119 6e-31
emb|CBR30396.1| RNA polymerase beta'' chain [Olea europaea subsp... 119 6e-31
ref|YP_004376411.1| RNA polymerase beta'' chain [Olea europaea s... 119 6e-31
gb|ADD72079.1| RNA polymerase beta' subunit [Olea europaea] gi|3... 119 6e-31
ref|YP_003359349.2| RNA polymerase beta II subunit (chloroplast)... 119 6e-31
ref|YP_004935656.2| rpoC2 gene product (chloroplast) [Sesamum in... 113 9e-28
ref|YP_009115885.1| RNA polymerase beta'' subunit [Scrophularia ... 111 3e-27
gb|ADO13870.1| RNA polymerase beta subunit, partial (chloroplast... 109 5e-26
gb|ABQ15075.1| RNA polymerase beta' subunit [Peridiscus lucidus] 103 2e-25
gb|ADD31150.1| RNA polymerase beta'' subunit protein (chloroplas... 106 3e-25
gb|AII18680.1| RNA polymerase beta' subunit, partial (chloroplas... 105 4e-25
gb|AII18682.1| RNA polymerase beta' subunit, partial (chloroplas... 105 4e-25
gb|AII18681.1| RNA polymerase beta' subunit, partial (chloroplas... 105 4e-25
gb|AII18679.1| RNA polymerase beta' subunit, partial (chloroplas... 105 4e-25
gb|AII18676.1| RNA polymerase beta' subunit, partial (chloroplas... 105 4e-25
gb|AII18675.1| RNA polymerase beta' subunit, partial (chloroplas... 105 4e-25
gb|AII18674.1| RNA polymerase beta' subunit, partial (chloroplas... 105 4e-25
gb|AII18673.1| RNA polymerase beta' subunit, partial (chloroplas... 105 4e-25
>ref|YP_009110592.1| RNA polymerase beta'' chain (chloroplast) [Hesperelaea palmeri]
gi|725798276|emb|CED79752.1| RNA polymerase beta'' chain
(chloroplast) [Hesperelaea palmeri]
Length = 1394
Score = 119 bits (299), Expect(2) = 6e-31
Identities = 61/67 (91%), Positives = 62/67 (92%)
Frame = +1
Query: 106 FIIPLQSIQERENELMPRLGISIEIPPNGIFRRNSILA*FDDPRYRRKSSRITKYRTREM 285
FIIPLQSIQERENELMPR GISIEIPPNGIFRRNSILA FDDPRYRRKSS ITKY T EM
Sbjct: 581 FIIPLQSIQERENELMPRSGISIEIPPNGIFRRNSILAYFDDPRYRRKSSGITKYGTIEM 640
Query: 286 HSIVKKK 306
HSIVKK+
Sbjct: 641 HSIVKKE 647
Score = 41.2 bits (95), Expect(2) = 6e-31
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = +2
Query: 20 CNLIFPTILHQNSDLFSKWWRTK 88
CNLI+PTILHQNSDLFSK R +
Sbjct: 558 CNLIYPTILHQNSDLFSKRRRNR 580
>ref|YP_004563771.1| RNA polymerase beta'' chain [Olea europaea subsp. cuspidata]
gi|334084940|emb|CBJ04288.1| RNA polymerase beta'' chain
[Olea europaea subsp. cuspidata]
Length = 1394
Score = 119 bits (299), Expect(2) = 6e-31
Identities = 61/67 (91%), Positives = 62/67 (92%)
Frame = +1
Query: 106 FIIPLQSIQERENELMPRLGISIEIPPNGIFRRNSILA*FDDPRYRRKSSRITKYRTREM 285
FIIPLQSIQERENELMPR GISIEIPPNGIFRRNSILA FDDPRYRRKSS ITKY T EM
Sbjct: 581 FIIPLQSIQERENELMPRSGISIEIPPNGIFRRNSILAYFDDPRYRRKSSGITKYGTIEM 640
Query: 286 HSIVKKK 306
HSIVKK+
Sbjct: 641 HSIVKKE 647
Score = 41.2 bits (95), Expect(2) = 6e-31
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = +2
Query: 20 CNLIFPTILHQNSDLFSKWWRTK 88
CNLI+PTILHQNSDLFSK R +
Sbjct: 558 CNLIYPTILHQNSDLFSKRRRNR 580
>ref|YP_004563994.1| RNA polymerase beta'' chain [Olea woodiana subsp. woodiana]
gi|334084649|emb|CBS29340.1| RNA polymerase beta'' chain
[Olea woodiana subsp. woodiana]
Length = 1394
Score = 119 bits (299), Expect(2) = 6e-31
Identities = 61/67 (91%), Positives = 62/67 (92%)
Frame = +1
Query: 106 FIIPLQSIQERENELMPRLGISIEIPPNGIFRRNSILA*FDDPRYRRKSSRITKYRTREM 285
FIIPLQSIQERENELMPR GISIEIPPNGIFRRNSILA FDDPRYRRKSS ITKY T EM
Sbjct: 581 FIIPLQSIQERENELMPRSGISIEIPPNGIFRRNSILAYFDDPRYRRKSSGITKYGTIEM 640
Query: 286 HSIVKKK 306
HSIVKK+
Sbjct: 641 HSIVKKE 647
Score = 41.2 bits (95), Expect(2) = 6e-31
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = +2
Query: 20 CNLIFPTILHQNSDLFSKWWRTK 88
CNLI+PTILHQNSDLFSK R +
Sbjct: 558 CNLIYPTILHQNSDLFSKRRRNR 580
>emb|CBR30396.1| RNA polymerase beta'' chain [Olea europaea subsp. europaea]
Length = 1394
Score = 119 bits (299), Expect(2) = 6e-31
Identities = 61/67 (91%), Positives = 62/67 (92%)
Frame = +1
Query: 106 FIIPLQSIQERENELMPRLGISIEIPPNGIFRRNSILA*FDDPRYRRKSSRITKYRTREM 285
FIIPLQSIQERENELMPR GISIEIPPNGIFRRNSILA FDDPRYRRKSS ITKY T EM
Sbjct: 581 FIIPLQSIQERENELMPRSGISIEIPPNGIFRRNSILAYFDDPRYRRKSSGITKYGTIEM 640
Query: 286 HSIVKKK 306
HSIVKK+
Sbjct: 641 HSIVKKE 647
Score = 41.2 bits (95), Expect(2) = 6e-31
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = +2
Query: 20 CNLIFPTILHQNSDLFSKWWRTK 88
CNLI+PTILHQNSDLFSK R +
Sbjct: 558 CNLIYPTILHQNSDLFSKRRRNR 580
>ref|YP_004376411.1| RNA polymerase beta'' chain [Olea europaea subsp. europaea]
gi|334701878|ref|YP_004564487.1| RNA polymerase beta''
chain [Olea europaea subsp. maroccana]
gi|328795423|emb|CBR30304.1| RNA polymerase beta'' chain
[Olea europaea subsp. europaea]
gi|334084391|emb|CBR23819.1| RNA polymerase beta'' chain
[Olea europaea subsp. cuspidata]
gi|334084854|emb|CBS29226.1| RNA polymerase beta'' chain
[Olea europaea subsp. maroccana]
gi|334085026|emb|CBR23728.1| RNA polymerase beta'' chain
[Olea europaea subsp. cuspidata]
Length = 1394
Score = 119 bits (299), Expect(2) = 6e-31
Identities = 61/67 (91%), Positives = 62/67 (92%)
Frame = +1
Query: 106 FIIPLQSIQERENELMPRLGISIEIPPNGIFRRNSILA*FDDPRYRRKSSRITKYRTREM 285
FIIPLQSIQERENELMPR GISIEIPPNGIFRRNSILA FDDPRYRRKSS ITKY T EM
Sbjct: 581 FIIPLQSIQERENELMPRSGISIEIPPNGIFRRNSILAYFDDPRYRRKSSGITKYGTIEM 640
Query: 286 HSIVKKK 306
HSIVKK+
Sbjct: 641 HSIVKKE 647
Score = 41.2 bits (95), Expect(2) = 6e-31
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = +2
Query: 20 CNLIFPTILHQNSDLFSKWWRTK 88
CNLI+PTILHQNSDLFSK R +
Sbjct: 558 CNLIYPTILHQNSDLFSKRRRNR 580
>gb|ADD72079.1| RNA polymerase beta' subunit [Olea europaea]
gi|334084477|emb|CBR24610.1| RNA polymerase beta'' chain
[Olea europaea subsp. europaea]
gi|510934394|emb|CCQ09092.1| RNA polymerase beta'' chain
(chloroplast) [Olea europaea subsp. europaea]
Length = 1394
Score = 119 bits (299), Expect(2) = 6e-31
Identities = 61/67 (91%), Positives = 62/67 (92%)
Frame = +1
Query: 106 FIIPLQSIQERENELMPRLGISIEIPPNGIFRRNSILA*FDDPRYRRKSSRITKYRTREM 285
FIIPLQSIQERENELMPR GISIEIPPNGIFRRNSILA FDDPRYRRKSS ITKY T EM
Sbjct: 581 FIIPLQSIQERENELMPRSGISIEIPPNGIFRRNSILAYFDDPRYRRKSSGITKYGTIEM 640
Query: 286 HSIVKKK 306
HSIVKK+
Sbjct: 641 HSIVKKE 647
Score = 41.2 bits (95), Expect(2) = 6e-31
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = +2
Query: 20 CNLIFPTILHQNSDLFSKWWRTK 88
CNLI+PTILHQNSDLFSK R +
Sbjct: 558 CNLIYPTILHQNSDLFSKRRRNR 580
>ref|YP_003359349.2| RNA polymerase beta II subunit (chloroplast) [Olea europaea]
gi|363413081|gb|ADA69916.2| RNA polymerase beta II
subunit (chloroplast) [Olea europaea]
Length = 1390
Score = 119 bits (299), Expect(2) = 6e-31
Identities = 61/67 (91%), Positives = 62/67 (92%)
Frame = +1
Query: 106 FIIPLQSIQERENELMPRLGISIEIPPNGIFRRNSILA*FDDPRYRRKSSRITKYRTREM 285
FIIPLQSIQERENELMPR GISIEIPPNGIFRRNSILA FDDPRYRRKSS ITKY T EM
Sbjct: 577 FIIPLQSIQERENELMPRSGISIEIPPNGIFRRNSILAYFDDPRYRRKSSGITKYGTIEM 636
Query: 286 HSIVKKK 306
HSIVKK+
Sbjct: 637 HSIVKKE 643
Score = 41.2 bits (95), Expect(2) = 6e-31
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = +2
Query: 20 CNLIFPTILHQNSDLFSKWWRTK 88
CNLI+PTILHQNSDLFSK R +
Sbjct: 554 CNLIYPTILHQNSDLFSKRRRNR 576
>ref|YP_004935656.2| rpoC2 gene product (chloroplast) [Sesamum indicum]
gi|378747302|gb|AEO92696.2| RNA polymerase beta''
subunit (chloroplast) [Sesamum indicum]
gi|496538591|gb|AGL45326.1| RpoC2 (chloroplast) [Sesamum
indicum]
Length = 1390
Score = 113 bits (283), Expect(2) = 9e-28
Identities = 59/67 (88%), Positives = 60/67 (89%)
Frame = +1
Query: 106 FIIPLQSIQERENELMPRLGISIEIPPNGIFRRNSILA*FDDPRYRRKSSRITKYRTREM 285
FIIPLQSIQERENELMP GISIEIP NGIFRRNSILA FDDPRYRRKSS ITKY T EM
Sbjct: 579 FIIPLQSIQERENELMPPSGISIEIPINGIFRRNSILAYFDDPRYRRKSSGITKYGTLEM 638
Query: 286 HSIVKKK 306
HSIVKK+
Sbjct: 639 HSIVKKE 645
Score = 36.6 bits (83), Expect(2) = 9e-28
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = +2
Query: 20 CNLIFPTILHQNSDLFSKWWRTK 88
CNLI PTIL+QNSDLFSK R +
Sbjct: 556 CNLIDPTILYQNSDLFSKRRRNR 578
>ref|YP_009115885.1| RNA polymerase beta'' subunit [Scrophularia takesimensis]
gi|744673729|gb|AJD00714.1| RNA polymerase beta''
subunit [Scrophularia takesimensis]
Length = 1389
Score = 111 bits (277), Expect(2) = 3e-27
Identities = 58/67 (86%), Positives = 59/67 (88%)
Frame = +1
Query: 106 FIIPLQSIQERENELMPRLGISIEIPPNGIFRRNSILA*FDDPRYRRKSSRITKYRTREM 285
FIIPLQSIQERENELMP ISIEIP NGIFRRNSILA FDDPRYRRKSS ITKY T EM
Sbjct: 581 FIIPLQSIQERENELMPPSSISIEIPINGIFRRNSILAYFDDPRYRRKSSGITKYGTLEM 640
Query: 286 HSIVKKK 306
HSIVKK+
Sbjct: 641 HSIVKKE 647
Score = 37.4 bits (85), Expect(2) = 3e-27
Identities = 18/26 (69%), Positives = 20/26 (76%)
Frame = +2
Query: 11 TCHCNLIFPTILHQNSDLFSKWWRTK 88
T CNLI PTIL+QNSDLFSK R +
Sbjct: 555 TGRCNLIDPTILYQNSDLFSKRRRNR 580
>gb|ADO13870.1| RNA polymerase beta subunit, partial (chloroplast) [Gonocaryum
litorale]
Length = 1123
Score = 109 bits (272), Expect(2) = 5e-26
Identities = 56/67 (83%), Positives = 58/67 (86%)
Frame = +1
Query: 106 FIIPLQSIQERENELMPRLGISIEIPPNGIFRRNSILA*FDDPRYRRKSSRITKYRTREM 285
FIIP QSIQERENELMPR GIS+EIP NGI RRNSILA FDDPRYRRKSS ITKY T E
Sbjct: 557 FIIPFQSIQERENELMPRSGISVEIPINGILRRNSILAYFDDPRYRRKSSGITKYGTIEA 616
Query: 286 HSIVKKK 306
HSIVKK+
Sbjct: 617 HSIVKKE 623
Score = 35.0 bits (79), Expect(2) = 5e-26
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = +2
Query: 11 TCHCNLIFPTILHQNSDLFSKWWRTK 88
T CNLI+PTILH+N DL +K R +
Sbjct: 531 TGRCNLIYPTILHENYDLLAKKRRNR 556
>gb|ABQ15075.1| RNA polymerase beta' subunit [Peridiscus lucidus]
Length = 828
Score = 103 bits (257), Expect(2) = 2e-25
Identities = 56/69 (81%), Positives = 57/69 (82%), Gaps = 2/69 (2%)
Frame = +1
Query: 106 FIIPLQSIQERENELMPRL--GISIEIPPNGIFRRNSILA*FDDPRYRRKSSRITKYRTR 279
FIIP QSIQERE E MP GISIEIP NGIFRRNSILA FDDPRYRRKSS ITKY T
Sbjct: 114 FIIPFQSIQEREKEQMPHSDSGISIEIPINGIFRRNSILAYFDDPRYRRKSSGITKYETI 173
Query: 280 EMHSIVKKK 306
E+HSIVKKK
Sbjct: 174 EVHSIVKKK 182
Score = 38.9 bits (89), Expect(2) = 2e-25
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +2
Query: 11 TCHCNLIFPTILHQNSDLFSKWWRTK 88
T HCNLI+P ILH+NSDL +K R +
Sbjct: 88 TGHCNLIYPAILHENSDLLAKGRRNR 113
>gb|ADD31150.1| RNA polymerase beta'' subunit protein (chloroplast) [Aucuba
japonica]
Length = 1390
Score = 106 bits (264), Expect(2) = 3e-25
Identities = 57/66 (86%), Positives = 57/66 (86%)
Frame = +1
Query: 106 FIIPLQSIQERENELMPRLGISIEIPPNGIFRRNSILA*FDDPRYRRKSSRITKYRTREM 285
FII LQS QERENELMPR GISIEIP NGIFRRNSILA FDDPRYRRKSS ITKY T EM
Sbjct: 579 FIISLQSSQERENELMPRSGISIEIPINGIFRRNSILAYFDDPRYRRKSSGITKYGTIEM 638
Query: 286 HSIVKK 303
SIVKK
Sbjct: 639 PSIVKK 644
Score = 35.4 bits (80), Expect(2) = 3e-25
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = +2
Query: 11 TCHCNLIFPTILHQNSDLFSKWWRTK 88
T CNLI+P ILH+NSDL +K R +
Sbjct: 553 TGRCNLIYPAILHENSDLLAKRRRNR 578
>gb|AII18680.1| RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
punctatum]
Length = 1413
Score = 105 bits (263), Expect(2) = 4e-25
Identities = 55/67 (82%), Positives = 59/67 (88%)
Frame = +1
Query: 106 FIIPLQSIQERENELMPRLGISIEIPPNGIFRRNSILA*FDDPRYRRKSSRITKYRTREM 285
FIIPLQSIQERENEL+P GISIEIP NGIF RNSILA FDDPRYRRKSS ITKY T E+
Sbjct: 608 FIIPLQSIQERENELIPSSGISIEIPINGIFHRNSILAYFDDPRYRRKSSGITKYGTIEV 667
Query: 286 HSIVKKK 306
+SIVKK+
Sbjct: 668 NSIVKKE 674
Score = 35.4 bits (80), Expect(2) = 4e-25
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = +2
Query: 11 TCHCNLIFPTILHQNSDLFSKWWRTK 88
T CNLI+P ILH+NSDL +K R +
Sbjct: 582 TGRCNLIYPAILHENSDLLAKRRRNR 607
>gb|AII18682.1| RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
taiwanianum]
Length = 1384
Score = 105 bits (263), Expect(2) = 4e-25
Identities = 55/67 (82%), Positives = 59/67 (88%)
Frame = +1
Query: 106 FIIPLQSIQERENELMPRLGISIEIPPNGIFRRNSILA*FDDPRYRRKSSRITKYRTREM 285
FIIPLQSIQERENEL+P GISIEIP NGIF RNSILA FDDPRYRRKSS ITKY T E+
Sbjct: 579 FIIPLQSIQERENELIPSSGISIEIPINGIFHRNSILAYFDDPRYRRKSSGITKYGTIEV 638
Query: 286 HSIVKKK 306
+SIVKK+
Sbjct: 639 NSIVKKE 645
Score = 35.4 bits (80), Expect(2) = 4e-25
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = +2
Query: 11 TCHCNLIFPTILHQNSDLFSKWWRTK 88
T CNLI+P ILH+NSDL +K R +
Sbjct: 553 TGRCNLIYPAILHENSDLLAKRRRNR 578
>gb|AII18681.1| RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
sieboldii]
Length = 1384
Score = 105 bits (263), Expect(2) = 4e-25
Identities = 55/67 (82%), Positives = 59/67 (88%)
Frame = +1
Query: 106 FIIPLQSIQERENELMPRLGISIEIPPNGIFRRNSILA*FDDPRYRRKSSRITKYRTREM 285
FIIPLQSIQERENEL+P GISIEIP NGIF RNSILA FDDPRYRRKSS ITKY T E+
Sbjct: 579 FIIPLQSIQERENELIPSSGISIEIPINGIFHRNSILAYFDDPRYRRKSSGITKYGTIEV 638
Query: 286 HSIVKKK 306
+SIVKK+
Sbjct: 639 NSIVKKE 645
Score = 35.4 bits (80), Expect(2) = 4e-25
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = +2
Query: 11 TCHCNLIFPTILHQNSDLFSKWWRTK 88
T CNLI+P ILH+NSDL +K R +
Sbjct: 553 TGRCNLIYPAILHENSDLLAKRRRNR 578
>gb|AII18679.1| RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
plicatum]
Length = 1384
Score = 105 bits (263), Expect(2) = 4e-25
Identities = 55/67 (82%), Positives = 59/67 (88%)
Frame = +1
Query: 106 FIIPLQSIQERENELMPRLGISIEIPPNGIFRRNSILA*FDDPRYRRKSSRITKYRTREM 285
FIIPLQSIQERENEL+P GISIEIP NGIF RNSILA FDDPRYRRKSS ITKY T E+
Sbjct: 579 FIIPLQSIQERENELIPSSGISIEIPINGIFHRNSILAHFDDPRYRRKSSGITKYGTIEV 638
Query: 286 HSIVKKK 306
+SIVKK+
Sbjct: 639 NSIVKKE 645
Score = 35.4 bits (80), Expect(2) = 4e-25
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = +2
Query: 11 TCHCNLIFPTILHQNSDLFSKWWRTK 88
T CNLI+P ILH+NSDL +K R +
Sbjct: 553 TGRCNLIYPAILHENSDLLAKRRRNR 578
>gb|AII18676.1| RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
lutescens]
Length = 1384
Score = 105 bits (263), Expect(2) = 4e-25
Identities = 55/67 (82%), Positives = 59/67 (88%)
Frame = +1
Query: 106 FIIPLQSIQERENELMPRLGISIEIPPNGIFRRNSILA*FDDPRYRRKSSRITKYRTREM 285
FIIPLQSIQERENEL+P GISIEIP NGIF RNSILA FDDPRYRRKSS ITKY T E+
Sbjct: 579 FIIPLQSIQERENELIPSSGISIEIPINGIFHRNSILAHFDDPRYRRKSSGITKYGTIEV 638
Query: 286 HSIVKKK 306
+SIVKK+
Sbjct: 639 NSIVKKE 645
Score = 35.4 bits (80), Expect(2) = 4e-25
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = +2
Query: 11 TCHCNLIFPTILHQNSDLFSKWWRTK 88
T CNLI+P ILH+NSDL +K R +
Sbjct: 553 TGRCNLIYPAILHENSDLLAKRRRNR 578
>gb|AII18675.1| RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
lentago]
Length = 1384
Score = 105 bits (263), Expect(2) = 4e-25
Identities = 55/67 (82%), Positives = 59/67 (88%)
Frame = +1
Query: 106 FIIPLQSIQERENELMPRLGISIEIPPNGIFRRNSILA*FDDPRYRRKSSRITKYRTREM 285
FIIPLQSIQERENEL+P GISIEIP NGIF RNSILA FDDPRYRRKSS ITKY T E+
Sbjct: 579 FIIPLQSIQERENELIPSSGISIEIPINGIFHRNSILAYFDDPRYRRKSSGITKYGTIEV 638
Query: 286 HSIVKKK 306
+SIVKK+
Sbjct: 639 NSIVKKE 645
Score = 35.4 bits (80), Expect(2) = 4e-25
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = +2
Query: 11 TCHCNLIFPTILHQNSDLFSKWWRTK 88
T CNLI+P ILH+NSDL +K R +
Sbjct: 553 TGRCNLIYPAILHENSDLLAKRRRNR 578
>gb|AII18674.1| RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
lantanoides]
Length = 1384
Score = 105 bits (263), Expect(2) = 4e-25
Identities = 55/67 (82%), Positives = 59/67 (88%)
Frame = +1
Query: 106 FIIPLQSIQERENELMPRLGISIEIPPNGIFRRNSILA*FDDPRYRRKSSRITKYRTREM 285
FIIPLQSIQERENEL+P GISIEIP NGIF RNSILA FDDPRYRRKSS ITKY T E+
Sbjct: 579 FIIPLQSIQERENELIPSSGISIEIPINGIFHRNSILAYFDDPRYRRKSSGITKYGTIEV 638
Query: 286 HSIVKKK 306
+SIVKK+
Sbjct: 639 NSIVKKE 645
Score = 35.4 bits (80), Expect(2) = 4e-25
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = +2
Query: 11 TCHCNLIFPTILHQNSDLFSKWWRTK 88
T CNLI+P ILH+NSDL +K R +
Sbjct: 553 TGRCNLIYPAILHENSDLLAKRRRNR 578
>gb|AII18673.1| RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
grandiflorum]
Length = 1384
Score = 105 bits (263), Expect(2) = 4e-25
Identities = 55/67 (82%), Positives = 59/67 (88%)
Frame = +1
Query: 106 FIIPLQSIQERENELMPRLGISIEIPPNGIFRRNSILA*FDDPRYRRKSSRITKYRTREM 285
FIIPLQSIQERENEL+P GISIEIP NGIF RNSILA FDDPRYRRKSS ITKY T E+
Sbjct: 579 FIIPLQSIQERENELIPSSGISIEIPINGIFHRNSILAYFDDPRYRRKSSGITKYGTIEV 638
Query: 286 HSIVKKK 306
+SIVKK+
Sbjct: 639 NSIVKKE 645
Score = 35.4 bits (80), Expect(2) = 4e-25
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = +2
Query: 11 TCHCNLIFPTILHQNSDLFSKWWRTK 88
T CNLI+P ILH+NSDL +K R +
Sbjct: 553 TGRCNLIYPAILHENSDLLAKRRRNR 578