BLASTX nr result

ID: Forsythia22_contig00060894 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00060894
         (247 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011084313.1| PREDICTED: pumilio homolog 4 isoform X2 [Ses...    70   5e-10
ref|XP_011084312.1| PREDICTED: pumilio homolog 4 isoform X1 [Ses...    70   5e-10
gb|KHG29032.1| Pumilio -like protein [Gossypium arboreum]              62   1e-07
ref|XP_012458916.1| PREDICTED: pumilio homolog 4 isoform X3 [Gos...    59   2e-06
ref|XP_012458914.1| PREDICTED: pumilio homolog 4 isoform X1 [Gos...    59   2e-06
ref|XP_012458915.1| PREDICTED: pumilio homolog 4 isoform X2 [Gos...    59   2e-06
gb|KJB74738.1| hypothetical protein B456_012G005400 [Gossypium r...    59   2e-06
ref|XP_007009914.1| Pumilio 4 isoform 3 [Theobroma cacao] gi|508...    57   6e-06
ref|XP_007009913.1| Pumilio 4 isoform 2 [Theobroma cacao] gi|508...    57   6e-06
ref|XP_007009912.1| Pumilio 4 isoform 1 [Theobroma cacao] gi|508...    57   6e-06

>ref|XP_011084313.1| PREDICTED: pumilio homolog 4 isoform X2 [Sesamum indicum]
          Length = 986

 Score = 70.1 bits (170), Expect = 5e-10
 Identities = 39/67 (58%), Positives = 46/67 (68%)
 Frame = -3

Query: 242 SLSSRTPESHLVGRSIGPRLINVGNGVHLADKITSSASDTLNVSSSGINEIADIAASLSV 63
           S S  +  +  +GRS GP L+N+GNGVH A  + S  SD  N  SSGI EIADIAASLS 
Sbjct: 267 SSSFTSTRTEPLGRSRGPGLVNLGNGVHRAGNLNSMTSDPPNFPSSGIFEIADIAASLSG 326

Query: 62  LSMSKGQ 42
           LSMS+GQ
Sbjct: 327 LSMSRGQ 333


>ref|XP_011084312.1| PREDICTED: pumilio homolog 4 isoform X1 [Sesamum indicum]
          Length = 989

 Score = 70.1 bits (170), Expect = 5e-10
 Identities = 39/67 (58%), Positives = 46/67 (68%)
 Frame = -3

Query: 242 SLSSRTPESHLVGRSIGPRLINVGNGVHLADKITSSASDTLNVSSSGINEIADIAASLSV 63
           S S  +  +  +GRS GP L+N+GNGVH A  + S  SD  N  SSGI EIADIAASLS 
Sbjct: 267 SSSFTSTRTEPLGRSRGPGLVNLGNGVHRAGNLNSMTSDPPNFPSSGIFEIADIAASLSG 326

Query: 62  LSMSKGQ 42
           LSMS+GQ
Sbjct: 327 LSMSRGQ 333


>gb|KHG29032.1| Pumilio -like protein [Gossypium arboreum]
          Length = 1066

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 38/82 (46%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
 Frame = -3

Query: 245 SSLS-SRTPESHLVGRSIGPRLINVGNGVHLADKITSSASDTLNVSSSGINEIADIAASL 69
           SSLS S TPE HLVGRS G  L  VG+ V L DK     S+  N  SS + E+A++AA++
Sbjct: 302 SSLSRSTTPEQHLVGRSPGSGLPPVGSKVSLVDKKNIVGSNAQNGHSSAVPELAELAATI 361

Query: 68  SVLSMSKGQHLTQDNILNSLLQ 3
           S L++SK +H  +++ + S LQ
Sbjct: 362 SGLNLSKTRHADENSHMRSHLQ 383


>ref|XP_012458916.1| PREDICTED: pumilio homolog 4 isoform X3 [Gossypium raimondii]
          Length = 1002

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 37/82 (45%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
 Frame = -3

Query: 245 SSLS-SRTPESHLVGRSIGPRLINVGNGVHLADKITSSASDTLNVSSSGINEIADIAASL 69
           SSLS S TPE HLVGRS G  L  VG+ V L DK     S+  N   S   E+A++AA++
Sbjct: 393 SSLSRSTTPEQHLVGRSPGSGLPPVGSKVSLVDKKNIVGSNAQNGHPSAAPELAELAATI 452

Query: 68  SVLSMSKGQHLTQDNILNSLLQ 3
           S L++SK +H  +++ + S LQ
Sbjct: 453 SGLNLSKTRHADENSHMRSHLQ 474


>ref|XP_012458914.1| PREDICTED: pumilio homolog 4 isoform X1 [Gossypium raimondii]
          Length = 1121

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 37/82 (45%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
 Frame = -3

Query: 245 SSLS-SRTPESHLVGRSIGPRLINVGNGVHLADKITSSASDTLNVSSSGINEIADIAASL 69
           SSLS S TPE HLVGRS G  L  VG+ V L DK     S+  N   S   E+A++AA++
Sbjct: 393 SSLSRSTTPEQHLVGRSPGSGLPPVGSKVSLVDKKNIVGSNAQNGHPSAAPELAELAATI 452

Query: 68  SVLSMSKGQHLTQDNILNSLLQ 3
           S L++SK +H  +++ + S LQ
Sbjct: 453 SGLNLSKTRHADENSHMRSHLQ 474


>ref|XP_012458915.1| PREDICTED: pumilio homolog 4 isoform X2 [Gossypium raimondii]
           gi|763807837|gb|KJB74739.1| hypothetical protein
           B456_012G005400 [Gossypium raimondii]
           gi|763807838|gb|KJB74740.1| hypothetical protein
           B456_012G005400 [Gossypium raimondii]
          Length = 1030

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 37/82 (45%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
 Frame = -3

Query: 245 SSLS-SRTPESHLVGRSIGPRLINVGNGVHLADKITSSASDTLNVSSSGINEIADIAASL 69
           SSLS S TPE HLVGRS G  L  VG+ V L DK     S+  N   S   E+A++AA++
Sbjct: 302 SSLSRSTTPEQHLVGRSPGSGLPPVGSKVSLVDKKNIVGSNAQNGHPSAAPELAELAATI 361

Query: 68  SVLSMSKGQHLTQDNILNSLLQ 3
           S L++SK +H  +++ + S LQ
Sbjct: 362 SGLNLSKTRHADENSHMRSHLQ 383


>gb|KJB74738.1| hypothetical protein B456_012G005400 [Gossypium raimondii]
          Length = 1003

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 37/82 (45%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
 Frame = -3

Query: 245 SSLS-SRTPESHLVGRSIGPRLINVGNGVHLADKITSSASDTLNVSSSGINEIADIAASL 69
           SSLS S TPE HLVGRS G  L  VG+ V L DK     S+  N   S   E+A++AA++
Sbjct: 302 SSLSRSTTPEQHLVGRSPGSGLPPVGSKVSLVDKKNIVGSNAQNGHPSAAPELAELAATI 361

Query: 68  SVLSMSKGQHLTQDNILNSLLQ 3
           S L++SK +H  +++ + S LQ
Sbjct: 362 SGLNLSKTRHADENSHMRSHLQ 383


>ref|XP_007009914.1| Pumilio 4 isoform 3 [Theobroma cacao] gi|508726827|gb|EOY18724.1|
           Pumilio 4 isoform 3 [Theobroma cacao]
          Length = 767

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 36/82 (43%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
 Frame = -3

Query: 245 SSLS-SRTPESHLVGRSIGPRLINVGNGVHLADKITSSASDTLNVSSSGINEIADIAASL 69
           SSLS S TPE +LVGRS G  L  VG+ V  A+K     S+  N  SS + E+++I A+L
Sbjct: 300 SSLSRSTTPEPYLVGRSSGSGLPPVGSKVGHAEKKNIIGSNVQNGHSSAVTELSEIGATL 359

Query: 68  SVLSMSKGQHLTQDNILNSLLQ 3
           S L++SK +H  +++ + S LQ
Sbjct: 360 SGLTLSKTRHADENSHMRSQLQ 381


>ref|XP_007009913.1| Pumilio 4 isoform 2 [Theobroma cacao] gi|508726826|gb|EOY18723.1|
           Pumilio 4 isoform 2 [Theobroma cacao]
          Length = 907

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 36/82 (43%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
 Frame = -3

Query: 245 SSLS-SRTPESHLVGRSIGPRLINVGNGVHLADKITSSASDTLNVSSSGINEIADIAASL 69
           SSLS S TPE +LVGRS G  L  VG+ V  A+K     S+  N  SS + E+++I A+L
Sbjct: 300 SSLSRSTTPEPYLVGRSSGSGLPPVGSKVGHAEKKNIIGSNVQNGHSSAVTELSEIGATL 359

Query: 68  SVLSMSKGQHLTQDNILNSLLQ 3
           S L++SK +H  +++ + S LQ
Sbjct: 360 SGLTLSKTRHADENSHMRSQLQ 381


>ref|XP_007009912.1| Pumilio 4 isoform 1 [Theobroma cacao] gi|508726825|gb|EOY18722.1|
           Pumilio 4 isoform 1 [Theobroma cacao]
          Length = 1026

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 36/82 (43%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
 Frame = -3

Query: 245 SSLS-SRTPESHLVGRSIGPRLINVGNGVHLADKITSSASDTLNVSSSGINEIADIAASL 69
           SSLS S TPE +LVGRS G  L  VG+ V  A+K     S+  N  SS + E+++I A+L
Sbjct: 300 SSLSRSTTPEPYLVGRSSGSGLPPVGSKVGHAEKKNIIGSNVQNGHSSAVTELSEIGATL 359

Query: 68  SVLSMSKGQHLTQDNILNSLLQ 3
           S L++SK +H  +++ + S LQ
Sbjct: 360 SGLTLSKTRHADENSHMRSQLQ 381


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