BLASTX nr result

ID: Forsythia22_contig00060657 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00060657
         (318 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012845871.1| PREDICTED: pentatricopeptide repeat-containi...    87   4e-15
ref|XP_011100218.1| PREDICTED: pentatricopeptide repeat-containi...    82   1e-13
ref|XP_009795637.1| PREDICTED: pentatricopeptide repeat-containi...    64   4e-08
ref|XP_004243819.1| PREDICTED: pentatricopeptide repeat-containi...    61   3e-07
ref|XP_009625191.1| PREDICTED: pentatricopeptide repeat-containi...    60   6e-07

>ref|XP_012845871.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g58590-like [Erythranthe guttatus]
          Length = 769

 Score = 87.0 bits (214), Expect = 4e-15
 Identities = 46/97 (47%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
 Frame = -3

Query: 292 MRKSVSICSKITRQIIAVPGIFLNTQKSNFSVSSNGQNIKNRSHMR-ILEDPSRIQSLGE 116
           MR   SI +K + +         +TQK +FS SSNG+ IK+ + +  +L++P+ I SL E
Sbjct: 1   MRNLASIFAKSSYRSTFTHNRISSTQKLHFSASSNGEQIKHHNCIATLLQNPAEISSLKE 60

Query: 115 TKSLHALTIKMGSIPRQKPVFVHNNIIKNYASFGDFY 5
            KSLHAL I +GS P Q+PVF+HNNII  YASFG+ +
Sbjct: 61  AKSLHALVITVGSFPAQEPVFLHNNIISKYASFGEIF 97


>ref|XP_011100218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g58590
           [Sesamum indicum]
          Length = 733

 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 37/94 (39%), Positives = 61/94 (64%)
 Frame = -3

Query: 286 KSVSICSKITRQIIAVPGIFLNTQKSNFSVSSNGQNIKNRSHMRILEDPSRIQSLGETKS 107
           + ++I +  T Q   +  +  +T+K +   +S+G+NIK+  H+ +L DP++I+SL E KS
Sbjct: 2   RRLAIFTAATHQSGVIHNLISSTRKLHVPDNSDGKNIKHHRHLHLLHDPAKIRSLDEAKS 61

Query: 106 LHALTIKMGSIPRQKPVFVHNNIIKNYASFGDFY 5
            HA  I  GS P Q+PVF++NN++  YASFG  +
Sbjct: 62  FHAFVITSGSFPTQEPVFLYNNLVSKYASFGKIH 95


>ref|XP_009795637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g58590
           [Nicotiana sylvestris]
          Length = 776

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 29/61 (47%), Positives = 46/61 (75%)
 Frame = -3

Query: 193 SNGQNIKNRSHMRILEDPSRIQSLGETKSLHALTIKMGSIPRQKPVFVHNNIIKNYASFG 14
           S+G+NIK++  +++L++P  +QSL  TK++HALTI MG+ P Q P   HN+I+  Y++FG
Sbjct: 42  SHGENIKHQRLIQLLQEPHGVQSLDATKTIHALTITMGTDPTQ-PFLAHNSIMSKYSTFG 100

Query: 13  D 11
           D
Sbjct: 101 D 101


>ref|XP_004243819.1| PREDICTED: pentatricopeptide repeat-containing protein At3g58590
           [Solanum lycopersicum]
          Length = 753

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 31/62 (50%), Positives = 44/62 (70%)
 Frame = -3

Query: 196 SSNGQNIKNRSHMRILEDPSRIQSLGETKSLHALTIKMGSIPRQKPVFVHNNIIKNYASF 17
           S+NG NIK +  +++L++P+ IQSL ETK+LHALTI +G  P Q P   +N I+  Y+ F
Sbjct: 18  SNNGDNIKPQRLIQLLQEPNWIQSLDETKALHALTITIGQDPTQ-PFLANNTIMFRYSIF 76

Query: 16  GD 11
           GD
Sbjct: 77  GD 78


>ref|XP_009625191.1| PREDICTED: pentatricopeptide repeat-containing protein At3g58590
           [Nicotiana tomentosiformis]
           gi|697142167|ref|XP_009625192.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g58590
           [Nicotiana tomentosiformis]
          Length = 776

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 29/61 (47%), Positives = 43/61 (70%)
 Frame = -3

Query: 193 SNGQNIKNRSHMRILEDPSRIQSLGETKSLHALTIKMGSIPRQKPVFVHNNIIKNYASFG 14
           S+G+NIK++  +++L++P  +QSL  TK+LHALTI  G  P Q P   HN I+  Y++FG
Sbjct: 42  SHGENIKHQRLIQLLQEPHGVQSLDATKALHALTITTGPDPTQ-PFLAHNCIMSKYSTFG 100

Query: 13  D 11
           D
Sbjct: 101 D 101


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