BLASTX nr result
ID: Forsythia22_contig00059989
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00059989
(374 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera] 113 4e-27
emb|CAD40121.3| OSJNBa0061C06.5 [Oryza sativa Japonica Group] 116 6e-27
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa] 110 7e-27
gb|AAL31093.1|AC091749_22 putative retrotransposon-related prote... 116 7e-27
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 115 9e-27
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 115 1e-26
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 110 1e-26
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 115 1e-26
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group] 115 1e-26
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc... 115 1e-26
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 115 1e-26
emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera] 109 2e-26
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis] 110 3e-26
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 115 3e-26
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 115 3e-26
gb|AAC62132.1| copia-like retroelement pol polyprotein [Arabidop... 110 3e-26
gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subc... 114 3e-26
ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892... 108 4e-26
dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsi... 111 5e-26
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 110 2e-25
>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
Length = 1562
Score = 113 bits (283), Expect(2) = 4e-27
Identities = 55/86 (63%), Positives = 65/86 (75%)
Frame = +1
Query: 94 LVTQFGWELDQLDVKTAFLYGELDETIYMN*PLGFKKKGKSDLVCLLKKSLYGLKQAPRQ 273
+V+ F ELDQLDVKTAFL+G L+E IYM P GF KSD VC LKKSLYGLKQ+PRQ
Sbjct: 1014 MVSVFNLELDQLDVKTAFLHGNLEEEIYMKQPEGFVDSEKSDHVCFLKKSLYGLKQSPRQ 1073
Query: 274 WYIRFDTFVQNLGFQRSKYDSCLYCK 351
WY RFD F+ + F R++YDSC+Y K
Sbjct: 1074 WYKRFDAFMVSHEFMRNQYDSCVYFK 1099
Score = 34.3 bits (77), Expect(2) = 4e-27
Identities = 11/20 (55%), Positives = 19/20 (95%)
Frame = +3
Query: 33 VDYSEIFSPMIKHTTIRIIL 92
+DY+E+FSP++KH +IR++L
Sbjct: 993 IDYNEVFSPVVKHKSIRVLL 1012
>emb|CAD40121.3| OSJNBa0061C06.5 [Oryza sativa Japonica Group]
Length = 621
Score = 116 bits (291), Expect(2) = 6e-27
Identities = 55/91 (60%), Positives = 70/91 (76%)
Frame = +1
Query: 94 LVTQFGWELDQLDVKTAFLYGELDETIYMN*PLGFKKKGKSDLVCLLKKSLYGLKQAPRQ 273
+V +EL+Q+DVKTAFL+GEL+E IYM P GF GK +LVC LKKSLYGLKQ+PRQ
Sbjct: 302 IVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQ 361
Query: 274 WYIRFDTFVQNLGFQRSKYDSCLYCKGSGGA 366
WY RFD+F+ + F+RS YDSC+Y K + G+
Sbjct: 362 WYKRFDSFMLSQKFRRSNYDSCVYVKVADGS 392
Score = 30.8 bits (68), Expect(2) = 6e-27
Identities = 9/20 (45%), Positives = 19/20 (95%)
Frame = +3
Query: 33 VDYSEIFSPMIKHTTIRIIL 92
+D++++FSP++KH++IR +L
Sbjct: 281 IDFNDVFSPVVKHSSIRTLL 300
>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
Length = 1297
Score = 110 bits (275), Expect(2) = 7e-27
Identities = 48/84 (57%), Positives = 66/84 (78%)
Frame = +1
Query: 94 LVTQFGWELDQLDVKTAFLYGELDETIYMN*PLGFKKKGKSDLVCLLKKSLYGLKQAPRQ 273
+ Q+ E++Q+DVKTAFL+G+L+E IYM+ P GF + GK +LVC LKKSLYGLKQ+PRQ
Sbjct: 882 IAAQYDMEIEQMDVKTAFLHGDLEEDIYMSQPEGFVETGKENLVCRLKKSLYGLKQSPRQ 941
Query: 274 WYIRFDTFVQNLGFQRSKYDSCLY 345
WY FDT++ +G+ R +YD C+Y
Sbjct: 942 WYKPFDTYMLKIGYTRCQYDCCVY 965
Score = 36.6 bits (83), Expect(2) = 7e-27
Identities = 14/20 (70%), Positives = 19/20 (95%)
Frame = +3
Query: 33 VDYSEIFSPMIKHTTIRIIL 92
VDY EIFSP++KHT+IR++L
Sbjct: 861 VDYDEIFSPVVKHTSIRLLL 880
>gb|AAL31093.1|AC091749_22 putative retrotransposon-related protein [Oryza sativa Japonica
Group] gi|22655747|gb|AAN04164.1| Putative
retrotransposon protein [Oryza sativa Japonica Group]
gi|31431214|gb|AAP53029.1| retrotransposon protein,
putative, Ty1-copia subclass, expressed [Oryza sativa
Japonica Group]
Length = 1229
Score = 116 bits (290), Expect(2) = 7e-27
Identities = 55/93 (59%), Positives = 71/93 (76%)
Frame = +1
Query: 91 CLVTQFGWELDQLDVKTAFLYGELDETIYMN*PLGFKKKGKSDLVCLLKKSLYGLKQAPR 270
C+V EL+QLDVKT FL+GEL+E IYM+ P GF GK D VC LK+SLYGLKQ+PR
Sbjct: 851 CIVAMHDLELEQLDVKTIFLHGELEEEIYMDQPEGFIVPGKEDDVCKLKRSLYGLKQSPR 910
Query: 271 QWYIRFDTFVQNLGFQRSKYDSCLYCKGSGGAN 369
QWY RFD+F+ + GF+RS++DSC+Y K G++
Sbjct: 911 QWYKRFDSFMLSHGFKRSEFDSCVYIKFVNGSH 943
Score = 30.8 bits (68), Expect(2) = 7e-27
Identities = 10/17 (58%), Positives = 17/17 (100%)
Frame = +3
Query: 33 VDYSEIFSPMIKHTTIR 83
VDY+++FSP++KH++IR
Sbjct: 831 VDYNDVFSPVVKHSSIR 847
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 115 bits (289), Expect(2) = 9e-27
Identities = 55/91 (60%), Positives = 69/91 (75%)
Frame = +1
Query: 94 LVTQFGWELDQLDVKTAFLYGELDETIYMN*PLGFKKKGKSDLVCLLKKSLYGLKQAPRQ 273
+V +EL+Q+DVKTAFL+GEL+E IYM P GF GK +LVC LKKSLYGLKQ+PRQ
Sbjct: 1123 IVAMHDYELEQMDVKTAFLHGELEEDIYMEQPKGFVVPGKENLVCRLKKSLYGLKQSPRQ 1182
Query: 274 WYIRFDTFVQNLGFQRSKYDSCLYCKGSGGA 366
WY RFD+F+ + F+RS YDSC+Y K G+
Sbjct: 1183 WYKRFDSFMLSQKFRRSNYDSCVYLKVVDGS 1213
Score = 30.8 bits (68), Expect(2) = 9e-27
Identities = 9/20 (45%), Positives = 19/20 (95%)
Frame = +3
Query: 33 VDYSEIFSPMIKHTTIRIIL 92
+D++++FSP++KH++IR +L
Sbjct: 1102 IDFNDVFSPVVKHSSIRTLL 1121
>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53370655|gb|AAU89150.1| integrase core domain
containing protein [Oryza sativa Japonica Group]
gi|108710286|gb|ABF98081.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1322
Score = 115 bits (289), Expect(2) = 1e-26
Identities = 55/91 (60%), Positives = 70/91 (76%)
Frame = +1
Query: 94 LVTQFGWELDQLDVKTAFLYGELDETIYMN*PLGFKKKGKSDLVCLLKKSLYGLKQAPRQ 273
+VT EL+QLDVKT FL+GEL+E IYM+ P GF GK D VC LK+SLYGLKQ+PRQ
Sbjct: 906 IVTMHDLELEQLDVKTTFLHGELEEEIYMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPRQ 965
Query: 274 WYIRFDTFVQNLGFQRSKYDSCLYCKGSGGA 366
WY RFD+F+ + GF+RS++DSC+Y K G+
Sbjct: 966 WYKRFDSFMLSHGFKRSEFDSCVYIKFVNGS 996
Score = 30.8 bits (68), Expect(2) = 1e-26
Identities = 10/17 (58%), Positives = 17/17 (100%)
Frame = +3
Query: 33 VDYSEIFSPMIKHTTIR 83
VDY+++FSP++KH++IR
Sbjct: 885 VDYNDVFSPVVKHSSIR 901
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 110 bits (275), Expect(2) = 1e-26
Identities = 52/84 (61%), Positives = 64/84 (76%)
Frame = +1
Query: 94 LVTQFGWELDQLDVKTAFLYGELDETIYMN*PLGFKKKGKSDLVCLLKKSLYGLKQAPRQ 273
+V EL+QLDVKTAFL+GEL+E IYM P GF+ GK + VC LKKSLYGLKQ+PRQ
Sbjct: 891 IVAHQNLELEQLDVKTAFLHGELEEEIYMTQPDGFQVPGKENHVCKLKKSLYGLKQSPRQ 950
Query: 274 WYIRFDTFVQNLGFQRSKYDSCLY 345
WY RFD+++ LG+ RS YD C+Y
Sbjct: 951 WYKRFDSYMVKLGYTRSSYDCCVY 974
Score = 36.2 bits (82), Expect(2) = 1e-26
Identities = 13/20 (65%), Positives = 20/20 (100%)
Frame = +3
Query: 33 VDYSEIFSPMIKHTTIRIIL 92
VDY+EIFSP+++HT+IR++L
Sbjct: 870 VDYNEIFSPVVRHTSIRVLL 889
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 115 bits (288), Expect(2) = 1e-26
Identities = 55/91 (60%), Positives = 69/91 (75%)
Frame = +1
Query: 94 LVTQFGWELDQLDVKTAFLYGELDETIYMN*PLGFKKKGKSDLVCLLKKSLYGLKQAPRQ 273
+V +EL+Q+DVKTAFL+GEL+E IYM P GF GK +LVC LKKSLYGLKQ+PRQ
Sbjct: 842 IVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQ 901
Query: 274 WYIRFDTFVQNLGFQRSKYDSCLYCKGSGGA 366
WY RFD+F+ + F+RS YDSC+Y K G+
Sbjct: 902 WYKRFDSFMLSQKFRRSNYDSCVYLKVVDGS 932
Score = 31.2 bits (69), Expect(2) = 1e-26
Identities = 10/20 (50%), Positives = 19/20 (95%)
Frame = +3
Query: 33 VDYSEIFSPMIKHTTIRIIL 92
+D+++IFSP++KH++IR +L
Sbjct: 821 IDFNDIFSPVVKHSSIRTLL 840
>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
Length = 1037
Score = 115 bits (288), Expect(2) = 1e-26
Identities = 55/91 (60%), Positives = 69/91 (75%)
Frame = +1
Query: 94 LVTQFGWELDQLDVKTAFLYGELDETIYMN*PLGFKKKGKSDLVCLLKKSLYGLKQAPRQ 273
+V +EL+Q+DVKTAFL+GEL+E IYM P GF GK +LVC LKKSLYGLKQ+PRQ
Sbjct: 674 IVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQ 733
Query: 274 WYIRFDTFVQNLGFQRSKYDSCLYCKGSGGA 366
WY RFD+F+ + F+RS YDSC+Y K G+
Sbjct: 734 WYKRFDSFMLSQKFRRSNYDSCVYLKVVDGS 764
Score = 31.2 bits (69), Expect(2) = 1e-26
Identities = 10/20 (50%), Positives = 19/20 (95%)
Frame = +3
Query: 33 VDYSEIFSPMIKHTTIRIIL 92
+D+++IFSP++KH++IR +L
Sbjct: 653 IDFNDIFSPVVKHSSIRTLL 672
>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1278
Score = 115 bits (288), Expect(2) = 1e-26
Identities = 55/91 (60%), Positives = 70/91 (76%)
Frame = +1
Query: 94 LVTQFGWELDQLDVKTAFLYGELDETIYMN*PLGFKKKGKSDLVCLLKKSLYGLKQAPRQ 273
+V EL+QLDVKTAFL+GEL+E IYM+ P GF GK D VC LK+SLYGLKQ+PRQ
Sbjct: 906 IVAMHDLELEQLDVKTAFLHGELEEEIYMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPRQ 965
Query: 274 WYIRFDTFVQNLGFQRSKYDSCLYCKGSGGA 366
WY RFD+F+ + GF+RS++DSC+Y K G+
Sbjct: 966 WYKRFDSFMLSHGFKRSEFDSCVYIKFVNGS 996
Score = 30.8 bits (68), Expect(2) = 1e-26
Identities = 10/17 (58%), Positives = 17/17 (100%)
Frame = +3
Query: 33 VDYSEIFSPMIKHTTIR 83
VDY+++FSP++KH++IR
Sbjct: 885 VDYNDVFSPVVKHSSIR 901
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 115 bits (288), Expect(2) = 1e-26
Identities = 55/91 (60%), Positives = 69/91 (75%)
Frame = +1
Query: 94 LVTQFGWELDQLDVKTAFLYGELDETIYMN*PLGFKKKGKSDLVCLLKKSLYGLKQAPRQ 273
+V +EL+Q+DVKTAFL+GEL+E IYM P GF GK +LVC LKKSLYGLKQ+PRQ
Sbjct: 825 IVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQ 884
Query: 274 WYIRFDTFVQNLGFQRSKYDSCLYCKGSGGA 366
WY RFD+F+ + F+RS YDSC+Y K G+
Sbjct: 885 WYKRFDSFMLSQKFRRSNYDSCVYLKVVDGS 915
Score = 30.8 bits (68), Expect(2) = 1e-26
Identities = 9/20 (45%), Positives = 19/20 (95%)
Frame = +3
Query: 33 VDYSEIFSPMIKHTTIRIIL 92
+D++++FSP++KH++IR +L
Sbjct: 804 IDFNDVFSPVVKHSSIRTLL 823
>emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera]
Length = 939
Score = 109 bits (273), Expect(2) = 2e-26
Identities = 50/86 (58%), Positives = 67/86 (77%)
Frame = +1
Query: 94 LVTQFGWELDQLDVKTAFLYGELDETIYMN*PLGFKKKGKSDLVCLLKKSLYGLKQAPRQ 273
LV+ + EL Q+DV AFL+GEL+E I+M P GF KGK + VCLLK+SLYGLKQ+PRQ
Sbjct: 558 LVSLWNLELXQMDVNRAFLHGELEEEIFMQQPKGFIVKGKENQVCLLKRSLYGLKQSPRQ 617
Query: 274 WYIRFDTFVQNLGFQRSKYDSCLYCK 351
WY RFD F+ ++G+ RSK+D+C+Y +
Sbjct: 618 WYKRFDKFMTSVGYSRSKFDNCVYMR 643
Score = 36.2 bits (82), Expect(2) = 2e-26
Identities = 13/20 (65%), Positives = 20/20 (100%)
Frame = +3
Query: 33 VDYSEIFSPMIKHTTIRIIL 92
+D++EIFSPM+KHT+IR++L
Sbjct: 537 MDFNEIFSPMVKHTSIRVLL 556
>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
Length = 1334
Score = 110 bits (275), Expect(2) = 3e-26
Identities = 53/88 (60%), Positives = 66/88 (75%)
Frame = +1
Query: 94 LVTQFGWELDQLDVKTAFLYGELDETIYMN*PLGFKKKGKSDLVCLLKKSLYGLKQAPRQ 273
+V EL+Q+DVKTAFL+G L+E I M P GF+ K K D VCLL KSLYGLKQ+PRQ
Sbjct: 914 MVALLDLELEQMDVKTAFLHGNLEEQILMAQPEGFECKDKEDYVCLLHKSLYGLKQSPRQ 973
Query: 274 WYIRFDTFVQNLGFQRSKYDSCLYCKGS 357
WY RFD F+ + G++RS+YDSC+Y GS
Sbjct: 974 WYRRFDDFMVSKGYRRSRYDSCVYFGGS 1001
Score = 34.7 bits (78), Expect(2) = 3e-26
Identities = 13/20 (65%), Positives = 20/20 (100%)
Frame = +3
Query: 33 VDYSEIFSPMIKHTTIRIIL 92
VD++EIFSP++KH++IRI+L
Sbjct: 893 VDFNEIFSPVVKHSSIRILL 912
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 115 bits (287), Expect(2) = 3e-26
Identities = 55/91 (60%), Positives = 69/91 (75%)
Frame = +1
Query: 94 LVTQFGWELDQLDVKTAFLYGELDETIYMN*PLGFKKKGKSDLVCLLKKSLYGLKQAPRQ 273
+V +EL+Q+DVKTAFL+GEL+E IYM P GF GK +LVC LKKSLYGLKQ+PRQ
Sbjct: 951 IVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVLGKENLVCRLKKSLYGLKQSPRQ 1010
Query: 274 WYIRFDTFVQNLGFQRSKYDSCLYCKGSGGA 366
WY RFD+F+ + F+RS YDSC+Y K G+
Sbjct: 1011 WYKRFDSFMLSQKFRRSNYDSCVYLKVVDGS 1041
Score = 30.0 bits (66), Expect(2) = 3e-26
Identities = 9/20 (45%), Positives = 19/20 (95%)
Frame = +3
Query: 33 VDYSEIFSPMIKHTTIRIIL 92
+D++++FSP++KH++IR +L
Sbjct: 930 IDFNDVFSPIMKHSSIRTLL 949
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 115 bits (287), Expect(2) = 3e-26
Identities = 55/91 (60%), Positives = 69/91 (75%)
Frame = +1
Query: 94 LVTQFGWELDQLDVKTAFLYGELDETIYMN*PLGFKKKGKSDLVCLLKKSLYGLKQAPRQ 273
+V +EL+Q+DVKTAFL+GEL+E IYM P GF GK +LVC LKKSLYGLKQ+PRQ
Sbjct: 951 IVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVLGKENLVCRLKKSLYGLKQSPRQ 1010
Query: 274 WYIRFDTFVQNLGFQRSKYDSCLYCKGSGGA 366
WY RFD+F+ + F+RS YDSC+Y K G+
Sbjct: 1011 WYKRFDSFMLSQKFRRSNYDSCVYLKVVDGS 1041
Score = 30.0 bits (66), Expect(2) = 3e-26
Identities = 9/20 (45%), Positives = 19/20 (95%)
Frame = +3
Query: 33 VDYSEIFSPMIKHTTIRIIL 92
+D++++FSP++KH++IR +L
Sbjct: 930 IDFNDVFSPIMKHSSIRTLL 949
>gb|AAC62132.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1137
Score = 110 bits (276), Expect(2) = 3e-26
Identities = 52/86 (60%), Positives = 66/86 (76%)
Frame = +1
Query: 94 LVTQFGWELDQLDVKTAFLYGELDETIYMN*PLGFKKKGKSDLVCLLKKSLYGLKQAPRQ 273
+VT EL Q+DVKTAFL+G LDETIY+ P G+ K D VCLLK+SLYGL+Q+PRQ
Sbjct: 734 MVTHCDMELQQMDVKTAFLHGYLDETIYIEQPEGYVHKRYPDKVCLLKRSLYGLRQSPRQ 793
Query: 274 WYIRFDTFVQNLGFQRSKYDSCLYCK 351
W RF+ F+Q +G++RSKYDSC+Y K
Sbjct: 794 WNNRFNEFMQKIGYERSKYDSCVYFK 819
Score = 34.3 bits (77), Expect(2) = 3e-26
Identities = 12/20 (60%), Positives = 18/20 (90%)
Frame = +3
Query: 33 VDYSEIFSPMIKHTTIRIIL 92
+DY EIFSP++KH +IR++L
Sbjct: 713 IDYQEIFSPVVKHVSIRLLL 732
>gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 983
Score = 114 bits (285), Expect(2) = 3e-26
Identities = 54/91 (59%), Positives = 69/91 (75%)
Frame = +1
Query: 94 LVTQFGWELDQLDVKTAFLYGELDETIYMN*PLGFKKKGKSDLVCLLKKSLYGLKQAPRQ 273
+V +EL+Q+DVKTAFL+GEL+E IYM P GF GK +LVC LKKSLYGLKQ+PRQ
Sbjct: 658 IVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQ 717
Query: 274 WYIRFDTFVQNLGFQRSKYDSCLYCKGSGGA 366
WY RFD+F+ + F+RS YD+C+Y K G+
Sbjct: 718 WYKRFDSFMLSQKFRRSNYDNCVYLKVVDGS 748
Score = 30.8 bits (68), Expect(2) = 3e-26
Identities = 9/20 (45%), Positives = 19/20 (95%)
Frame = +3
Query: 33 VDYSEIFSPMIKHTTIRIIL 92
+D++++FSP++KH++IR +L
Sbjct: 637 IDFNDVFSPIVKHSSIRTLL 656
>ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892119 [Beta vulgaris subsp.
vulgaris]
Length = 1947
Score = 108 bits (270), Expect(2) = 4e-26
Identities = 52/84 (61%), Positives = 61/84 (72%)
Frame = +1
Query: 94 LVTQFGWELDQLDVKTAFLYGELDETIYMN*PLGFKKKGKSDLVCLLKKSLYGLKQAPRQ 273
+V F EL+QLDVKTAFL+GEL+E I M+ P GF GK C LKKSLYGLKQ+PRQ
Sbjct: 1004 MVAHFDLELEQLDVKTAFLHGELEEDILMSQPEGFVVPGKEKFACSLKKSLYGLKQSPRQ 1063
Query: 274 WYIRFDTFVQNLGFQRSKYDSCLY 345
WY RFD+F+ GF RS YD C+Y
Sbjct: 1064 WYKRFDSFMVEHGFDRSPYDCCVY 1087
Score = 36.2 bits (82), Expect(2) = 4e-26
Identities = 13/20 (65%), Positives = 20/20 (100%)
Frame = +3
Query: 33 VDYSEIFSPMIKHTTIRIIL 92
VDY+EIFSP+++HT+IR++L
Sbjct: 983 VDYNEIFSPVVRHTSIRVLL 1002
>dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsis thaliana]
Length = 1342
Score = 111 bits (277), Expect(2) = 5e-26
Identities = 52/84 (61%), Positives = 67/84 (79%)
Frame = +1
Query: 94 LVTQFGWELDQLDVKTAFLYGELDETIYMN*PLGFKKKGKSDLVCLLKKSLYGLKQAPRQ 273
+V QF EL+QLDVKTAFL+G LDE I M+ P G++ + ++ VCLLKKSLYGLKQ+PRQ
Sbjct: 923 IVVQFDMELEQLDVKTAFLHGNLDEYILMSQPEGYEDEDSTEKVCLLKKSLYGLKQSPRQ 982
Query: 274 WYIRFDTFVQNLGFQRSKYDSCLY 345
W RFD+F+ N G+QRSKY+ C+Y
Sbjct: 983 WNQRFDSFMINSGYQRSKYNPCVY 1006
Score = 33.1 bits (74), Expect(2) = 5e-26
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +3
Query: 33 VDYSEIFSPMIKHTTIRIIL 92
+DY EIFSP++KH +IR +L
Sbjct: 902 IDYQEIFSPVVKHVSIRYLL 921
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 110 bits (275), Expect(2) = 2e-25
Identities = 54/91 (59%), Positives = 67/91 (73%)
Frame = +1
Query: 94 LVTQFGWELDQLDVKTAFLYGELDETIYMN*PLGFKKKGKSDLVCLLKKSLYGLKQAPRQ 273
+V EL+QLDVKTAFL+GEL+E IYM+ P GF GK VC LK+SLYGLKQ+PRQ
Sbjct: 917 IVASHDLELEQLDVKTAFLHGELEEDIYMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQ 976
Query: 274 WYIRFDTFVQNLGFQRSKYDSCLYCKGSGGA 366
W RFD+F+ + F+RSKYDSC+Y K G+
Sbjct: 977 WNKRFDSFMLSHSFKRSKYDSCVYIKHVNGS 1007
Score = 32.0 bits (71), Expect(2) = 2e-25
Identities = 11/20 (55%), Positives = 18/20 (90%)
Frame = +3
Query: 33 VDYSEIFSPMIKHTTIRIIL 92
VDY+++FSP++KH++IR L
Sbjct: 896 VDYNDVFSPVVKHSSIRTFL 915