BLASTX nr result

ID: Forsythia22_contig00059060 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00059060
         (249 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP06615.1| unnamed protein product [Coffea canephora]             64   5e-08
ref|XP_009620000.1| PREDICTED: protein TRM32-like [Nicotiana tom...    63   7e-08
ref|XP_009804297.1| PREDICTED: protein TRM32-like isoform X2 [Ni...    60   7e-07
ref|XP_009804296.1| PREDICTED: protein TRM32-like isoform X1 [Ni...    60   7e-07

>emb|CDP06615.1| unnamed protein product [Coffea canephora]
          Length = 900

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 36/95 (37%), Positives = 55/95 (57%), Gaps = 13/95 (13%)
 Frame = -3

Query: 247 SSDPIRKQLERTASIHHLELSDVDPSGKIALNGEIVGNRDN-VQSPITGLLDPFLKKVSG 71
           SS P R  LER  SIHHL++S +DP  + + N E + +++N + S ++ LLDP   +  G
Sbjct: 127 SSYPTRLPLERKPSIHHLDVSSIDPCAETSFNDESLDHQENTLHSSVSILLDPLPPQFCG 186

Query: 70  ------------GTMLTVNHQKQTEVNKHWRQPVR 2
                         MLT N+ +Q+EVN+H +QPV+
Sbjct: 187 ESVAQSRTCHLCAAMLTKNYLRQSEVNEHGKQPVK 221


>ref|XP_009620000.1| PREDICTED: protein TRM32-like [Nicotiana tomentosiformis]
          Length = 796

 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 39/93 (41%), Positives = 54/93 (58%), Gaps = 13/93 (13%)
 Frame = -3

Query: 244 SDPIRKQLERTASIHHLELSDVDPSGKIALNGEIVGNRDNVQSPITGLLDPFLK------ 83
           S P R  LE+TASI +L+ ++VDPS KI LN E + +R+N  S +  LLDP L       
Sbjct: 123 SYPTRTPLEQTASIDYLDPANVDPSPKIPLNDETLQHRENKYSSVASLLDPPLPGKRKDV 182

Query: 82  -------KVSGGTMLTVNHQKQTEVNKHWRQPV 5
                  ++  G ML VNH KQ + NK+ +QP+
Sbjct: 183 VTTNDACELCAG-MLDVNHLKQCDTNKNGKQPI 214


>ref|XP_009804297.1| PREDICTED: protein TRM32-like isoform X2 [Nicotiana sylvestris]
          Length = 794

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 38/92 (41%), Positives = 52/92 (56%), Gaps = 12/92 (13%)
 Frame = -3

Query: 244 SDPIRKQLERTASIHHLELSDVDPSGKIALNGEIVGNRDNVQSPITGLLDPFL--KKVSG 71
           S P R  LE+TASI +L+ ++VDPS KI LN E + +R+N  S +  LLDP L  K+   
Sbjct: 121 SYPARTPLEQTASIDYLDPANVDPSQKIPLNDETLQHRENEYSSVASLLDPPLLEKRKDA 180

Query: 70  GT----------MLTVNHQKQTEVNKHWRQPV 5
            T          ML  NH KQ + NK+ +Q +
Sbjct: 181 VTTNGRCELCAAMLDTNHLKQCDTNKNGKQQI 212


>ref|XP_009804296.1| PREDICTED: protein TRM32-like isoform X1 [Nicotiana sylvestris]
          Length = 796

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 38/92 (41%), Positives = 52/92 (56%), Gaps = 12/92 (13%)
 Frame = -3

Query: 244 SDPIRKQLERTASIHHLELSDVDPSGKIALNGEIVGNRDNVQSPITGLLDPFL--KKVSG 71
           S P R  LE+TASI +L+ ++VDPS KI LN E + +R+N  S +  LLDP L  K+   
Sbjct: 123 SYPARTPLEQTASIDYLDPANVDPSQKIPLNDETLQHRENEYSSVASLLDPPLLEKRKDA 182

Query: 70  GT----------MLTVNHQKQTEVNKHWRQPV 5
            T          ML  NH KQ + NK+ +Q +
Sbjct: 183 VTTNGRCELCAAMLDTNHLKQCDTNKNGKQQI 214


Top