BLASTX nr result

ID: Forsythia22_contig00057244 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00057244
         (460 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN08628.1| RNA-directed DNA polymerase (Reverse transcriptas...    55   1e-06

>gb|ABN08628.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 243

 Score = 55.1 bits (131), Expect(2) = 1e-06
 Identities = 26/48 (54%), Positives = 37/48 (77%)
 Frame = +1

Query: 307 ILTKIISAKKVLDKRKKSTPVPIYKNK*NIQNSANDRGTRLMSQTMKL 450
           +  +I+  KK+LD+ ++ST +PIYKNK +IQ+ AN RG +LMS TMKL
Sbjct: 59  LFNEIMKTKKMLDEWRRSTLIPIYKNKGDIQHCANYRGIKLMSHTMKL 106



 Score = 23.5 bits (49), Expect(2) = 1e-06
 Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
 Frame = +3

Query: 153 PDDIPVEV*KSCRS-*VSWLTK 215
           PD+IP+EV KS     + WLTK
Sbjct: 37  PDNIPIEVWKSLGDRGIVWLTK 58


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