BLASTX nr result
ID: Forsythia22_contig00057101
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00057101
(267 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_009144505.1| RNA polymerase beta'' subunit (chloroplast) ... 176 7e-42
ref|YP_009110592.1| RNA polymerase beta'' chain (chloroplast) [H... 176 7e-42
ref|YP_004935656.2| rpoC2 gene product (chloroplast) [Sesamum in... 176 7e-42
ref|YP_003359349.2| RNA polymerase beta II subunit (chloroplast)... 176 7e-42
ref|YP_004563771.1| RNA polymerase beta'' chain [Olea europaea s... 176 7e-42
emb|CBR30396.1| RNA polymerase beta'' chain [Olea europaea subsp... 176 7e-42
ref|YP_004376411.1| RNA polymerase beta'' chain [Olea europaea s... 176 7e-42
gb|ADD72079.1| RNA polymerase beta' subunit [Olea europaea] gi|3... 176 7e-42
gb|AFV61804.1| RNA polymerase beta'' subunit (chloroplast) [Orig... 175 9e-42
ref|YP_004563994.1| RNA polymerase beta'' chain [Olea woodiana s... 175 1e-41
gb|ADX99128.1| RNA polymerase beta II subunit [Petrea volubilis] 174 2e-41
gb|AHH30431.1| RNA polymerase beta'' subunit (chloroplast) [Bart... 174 2e-41
gb|AHE41666.1| RNA polymerase beta' subunit, partial (chloroplas... 174 2e-41
gb|ABQ15077.1| RNA polymerase beta' subunit [Rhodoleia championii] 174 2e-41
gb|AHE41663.1| RNA polymerase beta' subunit, partial (chloroplas... 174 3e-41
gb|AHE41660.1| RNA polymerase beta' subunit, partial (chloroplas... 174 3e-41
gb|ABQ15062.1| RNA polymerase beta' subunit [Corylopsis pauciflora] 174 3e-41
gb|ABQ15065.1| RNA polymerase beta' subunit [Exbucklandia populnea] 174 3e-41
ref|YP_009115885.1| RNA polymerase beta'' subunit [Scrophularia ... 173 4e-41
ref|YP_007507101.1| RNA polymerase beta subunit-2 (chloroplast) ... 173 4e-41
>ref|YP_009144505.1| RNA polymerase beta'' subunit (chloroplast) [Rosmarinus officinalis]
gi|827345133|gb|AKJ76717.1| RNA polymerase beta'' subunit
(chloroplast) [Rosmarinus officinalis]
Length = 1395
Score = 176 bits (445), Expect = 7e-42
Identities = 88/88 (100%), Positives = 88/88 (100%)
Frame = -3
Query: 265 SGQVILVQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTLITFIYEKSRSGDITQGLP 86
SGQVILVQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTLITFIYEKSRSGDITQGLP
Sbjct: 1093 SGQVILVQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTLITFIYEKSRSGDITQGLP 1152
Query: 85 KVEQVLEVRSIDSISMNLEKRVEGWNER 2
KVEQVLEVRSIDSISMNLEKRVEGWNER
Sbjct: 1153 KVEQVLEVRSIDSISMNLEKRVEGWNER 1180
>ref|YP_009110592.1| RNA polymerase beta'' chain (chloroplast) [Hesperelaea palmeri]
gi|725798276|emb|CED79752.1| RNA polymerase beta'' chain
(chloroplast) [Hesperelaea palmeri]
Length = 1394
Score = 176 bits (445), Expect = 7e-42
Identities = 88/88 (100%), Positives = 88/88 (100%)
Frame = -3
Query: 265 SGQVILVQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTLITFIYEKSRSGDITQGLP 86
SGQVILVQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTLITFIYEKSRSGDITQGLP
Sbjct: 1094 SGQVILVQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTLITFIYEKSRSGDITQGLP 1153
Query: 85 KVEQVLEVRSIDSISMNLEKRVEGWNER 2
KVEQVLEVRSIDSISMNLEKRVEGWNER
Sbjct: 1154 KVEQVLEVRSIDSISMNLEKRVEGWNER 1181
>ref|YP_004935656.2| rpoC2 gene product (chloroplast) [Sesamum indicum]
gi|378747302|gb|AEO92696.2| RNA polymerase beta'' subunit
(chloroplast) [Sesamum indicum]
gi|496538591|gb|AGL45326.1| RpoC2 (chloroplast) [Sesamum
indicum]
Length = 1390
Score = 176 bits (445), Expect = 7e-42
Identities = 88/88 (100%), Positives = 88/88 (100%)
Frame = -3
Query: 265 SGQVILVQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTLITFIYEKSRSGDITQGLP 86
SGQVILVQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTLITFIYEKSRSGDITQGLP
Sbjct: 1090 SGQVILVQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTLITFIYEKSRSGDITQGLP 1149
Query: 85 KVEQVLEVRSIDSISMNLEKRVEGWNER 2
KVEQVLEVRSIDSISMNLEKRVEGWNER
Sbjct: 1150 KVEQVLEVRSIDSISMNLEKRVEGWNER 1177
>ref|YP_003359349.2| RNA polymerase beta II subunit (chloroplast) [Olea europaea]
gi|363413081|gb|ADA69916.2| RNA polymerase beta II
subunit (chloroplast) [Olea europaea]
Length = 1390
Score = 176 bits (445), Expect = 7e-42
Identities = 88/88 (100%), Positives = 88/88 (100%)
Frame = -3
Query: 265 SGQVILVQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTLITFIYEKSRSGDITQGLP 86
SGQVILVQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTLITFIYEKSRSGDITQGLP
Sbjct: 1090 SGQVILVQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTLITFIYEKSRSGDITQGLP 1149
Query: 85 KVEQVLEVRSIDSISMNLEKRVEGWNER 2
KVEQVLEVRSIDSISMNLEKRVEGWNER
Sbjct: 1150 KVEQVLEVRSIDSISMNLEKRVEGWNER 1177
>ref|YP_004563771.1| RNA polymerase beta'' chain [Olea europaea subsp. cuspidata]
gi|334084940|emb|CBJ04288.1| RNA polymerase beta'' chain
[Olea europaea subsp. cuspidata]
Length = 1394
Score = 176 bits (445), Expect = 7e-42
Identities = 88/88 (100%), Positives = 88/88 (100%)
Frame = -3
Query: 265 SGQVILVQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTLITFIYEKSRSGDITQGLP 86
SGQVILVQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTLITFIYEKSRSGDITQGLP
Sbjct: 1094 SGQVILVQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTLITFIYEKSRSGDITQGLP 1153
Query: 85 KVEQVLEVRSIDSISMNLEKRVEGWNER 2
KVEQVLEVRSIDSISMNLEKRVEGWNER
Sbjct: 1154 KVEQVLEVRSIDSISMNLEKRVEGWNER 1181
>emb|CBR30396.1| RNA polymerase beta'' chain [Olea europaea subsp. europaea]
Length = 1394
Score = 176 bits (445), Expect = 7e-42
Identities = 88/88 (100%), Positives = 88/88 (100%)
Frame = -3
Query: 265 SGQVILVQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTLITFIYEKSRSGDITQGLP 86
SGQVILVQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTLITFIYEKSRSGDITQGLP
Sbjct: 1094 SGQVILVQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTLITFIYEKSRSGDITQGLP 1153
Query: 85 KVEQVLEVRSIDSISMNLEKRVEGWNER 2
KVEQVLEVRSIDSISMNLEKRVEGWNER
Sbjct: 1154 KVEQVLEVRSIDSISMNLEKRVEGWNER 1181
>ref|YP_004376411.1| RNA polymerase beta'' chain [Olea europaea subsp. europaea]
gi|334701878|ref|YP_004564487.1| RNA polymerase beta''
chain [Olea europaea subsp. maroccana]
gi|328795423|emb|CBR30304.1| RNA polymerase beta'' chain
[Olea europaea subsp. europaea]
gi|334084391|emb|CBR23819.1| RNA polymerase beta'' chain
[Olea europaea subsp. cuspidata]
gi|334084854|emb|CBS29226.1| RNA polymerase beta'' chain
[Olea europaea subsp. maroccana]
gi|334085026|emb|CBR23728.1| RNA polymerase beta'' chain
[Olea europaea subsp. cuspidata]
Length = 1394
Score = 176 bits (445), Expect = 7e-42
Identities = 88/88 (100%), Positives = 88/88 (100%)
Frame = -3
Query: 265 SGQVILVQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTLITFIYEKSRSGDITQGLP 86
SGQVILVQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTLITFIYEKSRSGDITQGLP
Sbjct: 1094 SGQVILVQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTLITFIYEKSRSGDITQGLP 1153
Query: 85 KVEQVLEVRSIDSISMNLEKRVEGWNER 2
KVEQVLEVRSIDSISMNLEKRVEGWNER
Sbjct: 1154 KVEQVLEVRSIDSISMNLEKRVEGWNER 1181
>gb|ADD72079.1| RNA polymerase beta' subunit [Olea europaea]
gi|334084477|emb|CBR24610.1| RNA polymerase beta'' chain
[Olea europaea subsp. europaea]
gi|510934394|emb|CCQ09092.1| RNA polymerase beta'' chain
(chloroplast) [Olea europaea subsp. europaea]
Length = 1394
Score = 176 bits (445), Expect = 7e-42
Identities = 88/88 (100%), Positives = 88/88 (100%)
Frame = -3
Query: 265 SGQVILVQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTLITFIYEKSRSGDITQGLP 86
SGQVILVQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTLITFIYEKSRSGDITQGLP
Sbjct: 1094 SGQVILVQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTLITFIYEKSRSGDITQGLP 1153
Query: 85 KVEQVLEVRSIDSISMNLEKRVEGWNER 2
KVEQVLEVRSIDSISMNLEKRVEGWNER
Sbjct: 1154 KVEQVLEVRSIDSISMNLEKRVEGWNER 1181
>gb|AFV61804.1| RNA polymerase beta'' subunit (chloroplast) [Origanum vulgare subsp.
vulgare]
Length = 1397
Score = 175 bits (444), Expect = 9e-42
Identities = 87/88 (98%), Positives = 88/88 (100%)
Frame = -3
Query: 265 SGQVILVQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTLITFIYEKSRSGDITQGLP 86
SGQVILVQVDSVVIRSAKPYLATPGATVHGHYGE+LYEGDTLITFIYEKSRSGDITQGLP
Sbjct: 1095 SGQVILVQVDSVVIRSAKPYLATPGATVHGHYGEVLYEGDTLITFIYEKSRSGDITQGLP 1154
Query: 85 KVEQVLEVRSIDSISMNLEKRVEGWNER 2
KVEQVLEVRSIDSISMNLEKRVEGWNER
Sbjct: 1155 KVEQVLEVRSIDSISMNLEKRVEGWNER 1182
>ref|YP_004563994.1| RNA polymerase beta'' chain [Olea woodiana subsp. woodiana]
gi|334084649|emb|CBS29340.1| RNA polymerase beta'' chain
[Olea woodiana subsp. woodiana]
Length = 1394
Score = 175 bits (443), Expect = 1e-41
Identities = 87/88 (98%), Positives = 88/88 (100%)
Frame = -3
Query: 265 SGQVILVQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTLITFIYEKSRSGDITQGLP 86
SGQV+LVQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTLITFIYEKSRSGDITQGLP
Sbjct: 1094 SGQVLLVQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTLITFIYEKSRSGDITQGLP 1153
Query: 85 KVEQVLEVRSIDSISMNLEKRVEGWNER 2
KVEQVLEVRSIDSISMNLEKRVEGWNER
Sbjct: 1154 KVEQVLEVRSIDSISMNLEKRVEGWNER 1181
>gb|ADX99128.1| RNA polymerase beta II subunit [Petrea volubilis]
Length = 682
Score = 174 bits (442), Expect = 2e-41
Identities = 87/88 (98%), Positives = 88/88 (100%)
Frame = -3
Query: 265 SGQVILVQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTLITFIYEKSRSGDITQGLP 86
SGQVILVQVDSVVIRSAKPYLATPGATVHGHYGEILY+GDTLITFIYEKSRSGDITQGLP
Sbjct: 423 SGQVILVQVDSVVIRSAKPYLATPGATVHGHYGEILYQGDTLITFIYEKSRSGDITQGLP 482
Query: 85 KVEQVLEVRSIDSISMNLEKRVEGWNER 2
KVEQVLEVRSIDSISMNLEKRVEGWNER
Sbjct: 483 KVEQVLEVRSIDSISMNLEKRVEGWNER 510
>gb|AHH30431.1| RNA polymerase beta'' subunit (chloroplast) [Bartsia inaequalis]
Length = 1384
Score = 174 bits (441), Expect = 2e-41
Identities = 87/88 (98%), Positives = 88/88 (100%)
Frame = -3
Query: 265 SGQVILVQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTLITFIYEKSRSGDITQGLP 86
SGQVILVQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTLITFIYEKSRSGDITQGLP
Sbjct: 1084 SGQVILVQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTLITFIYEKSRSGDITQGLP 1143
Query: 85 KVEQVLEVRSIDSISMNLEKRVEGWNER 2
KVEQVLEVRSIDSISMNLEKRVEGWN+R
Sbjct: 1144 KVEQVLEVRSIDSISMNLEKRVEGWNKR 1171
>gb|AHE41666.1| RNA polymerase beta' subunit, partial (chloroplast) [Rhodoleia
championii]
Length = 1375
Score = 174 bits (441), Expect = 2e-41
Identities = 85/88 (96%), Positives = 88/88 (100%)
Frame = -3
Query: 265 SGQVILVQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTLITFIYEKSRSGDITQGLP 86
SGQV++VQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTL+TFIYEKSRSGDITQGLP
Sbjct: 1075 SGQVVIVQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTLVTFIYEKSRSGDITQGLP 1134
Query: 85 KVEQVLEVRSIDSISMNLEKRVEGWNER 2
KVEQVLEVRSIDSISMNLEKRVEGWNER
Sbjct: 1135 KVEQVLEVRSIDSISMNLEKRVEGWNER 1162
>gb|ABQ15077.1| RNA polymerase beta' subunit [Rhodoleia championii]
Length = 813
Score = 174 bits (441), Expect = 2e-41
Identities = 85/88 (96%), Positives = 88/88 (100%)
Frame = -3
Query: 265 SGQVILVQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTLITFIYEKSRSGDITQGLP 86
SGQV++VQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTL+TFIYEKSRSGDITQGLP
Sbjct: 615 SGQVVIVQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTLVTFIYEKSRSGDITQGLP 674
Query: 85 KVEQVLEVRSIDSISMNLEKRVEGWNER 2
KVEQVLEVRSIDSISMNLEKRVEGWNER
Sbjct: 675 KVEQVLEVRSIDSISMNLEKRVEGWNER 702
>gb|AHE41663.1| RNA polymerase beta' subunit, partial (chloroplast) [Mytilaria
laosensis]
Length = 1374
Score = 174 bits (440), Expect = 3e-41
Identities = 85/88 (96%), Positives = 88/88 (100%)
Frame = -3
Query: 265 SGQVILVQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTLITFIYEKSRSGDITQGLP 86
SGQV++VQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTL+TFIYEKSRSGDITQGLP
Sbjct: 1074 SGQVLIVQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTLVTFIYEKSRSGDITQGLP 1133
Query: 85 KVEQVLEVRSIDSISMNLEKRVEGWNER 2
KVEQVLEVRSIDSISMNLEKRVEGWNER
Sbjct: 1134 KVEQVLEVRSIDSISMNLEKRVEGWNER 1161
>gb|AHE41660.1| RNA polymerase beta' subunit, partial (chloroplast) [Exbucklandia
populnea]
Length = 1368
Score = 174 bits (440), Expect = 3e-41
Identities = 85/88 (96%), Positives = 88/88 (100%)
Frame = -3
Query: 265 SGQVILVQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTLITFIYEKSRSGDITQGLP 86
SGQV++VQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTL+TFIYEKSRSGDITQGLP
Sbjct: 1068 SGQVLIVQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTLVTFIYEKSRSGDITQGLP 1127
Query: 85 KVEQVLEVRSIDSISMNLEKRVEGWNER 2
KVEQVLEVRSIDSISMNLEKRVEGWNER
Sbjct: 1128 KVEQVLEVRSIDSISMNLEKRVEGWNER 1155
>gb|ABQ15062.1| RNA polymerase beta' subunit [Corylopsis pauciflora]
Length = 821
Score = 174 bits (440), Expect = 3e-41
Identities = 85/88 (96%), Positives = 88/88 (100%)
Frame = -3
Query: 265 SGQVILVQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTLITFIYEKSRSGDITQGLP 86
SGQV++VQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTL+TFIYEKSRSGDITQGLP
Sbjct: 620 SGQVLIVQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTLVTFIYEKSRSGDITQGLP 679
Query: 85 KVEQVLEVRSIDSISMNLEKRVEGWNER 2
KVEQVLEVRSIDSISMNLEKRVEGWNER
Sbjct: 680 KVEQVLEVRSIDSISMNLEKRVEGWNER 707
>gb|ABQ15065.1| RNA polymerase beta' subunit [Exbucklandia populnea]
Length = 802
Score = 174 bits (440), Expect = 3e-41
Identities = 85/88 (96%), Positives = 88/88 (100%)
Frame = -3
Query: 265 SGQVILVQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTLITFIYEKSRSGDITQGLP 86
SGQV++VQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTL+TFIYEKSRSGDITQGLP
Sbjct: 600 SGQVLIVQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTLVTFIYEKSRSGDITQGLP 659
Query: 85 KVEQVLEVRSIDSISMNLEKRVEGWNER 2
KVEQVLEVRSIDSISMNLEKRVEGWNER
Sbjct: 660 KVEQVLEVRSIDSISMNLEKRVEGWNER 687
>ref|YP_009115885.1| RNA polymerase beta'' subunit [Scrophularia takesimensis]
gi|744673729|gb|AJD00714.1| RNA polymerase beta'' subunit
[Scrophularia takesimensis]
Length = 1389
Score = 173 bits (439), Expect = 4e-41
Identities = 86/88 (97%), Positives = 88/88 (100%)
Frame = -3
Query: 265 SGQVILVQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTLITFIYEKSRSGDITQGLP 86
SGQVILVQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTLITFIYEKSRSGDITQGLP
Sbjct: 1089 SGQVILVQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTLITFIYEKSRSGDITQGLP 1148
Query: 85 KVEQVLEVRSIDSISMNLEKRVEGWNER 2
KVEQVLEVRSIDSISMNLEKRV+GWN+R
Sbjct: 1149 KVEQVLEVRSIDSISMNLEKRVQGWNDR 1176
>ref|YP_007507101.1| RNA polymerase beta subunit-2 (chloroplast) [Salvia miltiorrhiza]
gi|401879732|gb|AFQ30919.1| RNA polymerase beta subunit-2
(chloroplast) [Salvia miltiorrhiza]
gi|573461941|emb|CCQ71610.1| RNA polymerase beta''
subunit (chloroplast) [Salvia miltiorrhiza]
Length = 1395
Score = 173 bits (439), Expect = 4e-41
Identities = 87/88 (98%), Positives = 87/88 (98%)
Frame = -3
Query: 265 SGQVILVQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTLITFIYEKSRSGDITQGLP 86
SGQVILVQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTLITFIYEKSRSGDITQGLP
Sbjct: 1093 SGQVILVQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTLITFIYEKSRSGDITQGLP 1152
Query: 85 KVEQVLEVRSIDSISMNLEKRVEGWNER 2
KVEQVLEVRSIDSISMNL KRVEGWNER
Sbjct: 1153 KVEQVLEVRSIDSISMNLAKRVEGWNER 1180