BLASTX nr result

ID: Forsythia22_contig00057042 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00057042
         (323 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008380449.1| PREDICTED: F-box protein At3g07870-like isof...    72   1e-14
ref|XP_009373589.1| PREDICTED: F-box protein At3g07870-like isof...    72   1e-14
ref|XP_009373590.1| PREDICTED: F-box protein At3g07870-like isof...    72   1e-14
ref|XP_008380450.1| PREDICTED: F-box protein At3g07870-like isof...    72   1e-14
ref|XP_009373591.1| PREDICTED: F-box protein At3g07870-like isof...    72   1e-14
ref|XP_008380451.1| PREDICTED: F-box protein At3g07870-like isof...    72   1e-14
ref|XP_007221317.1| hypothetical protein PRUPE_ppa020265mg [Prun...    65   2e-12
ref|XP_002316992.2| hypothetical protein POPTR_0011s14030g [Popu...    50   3e-06
ref|XP_011030815.1| PREDICTED: F-box protein At3g07870-like [Pop...    48   9e-06

>ref|XP_008380449.1| PREDICTED: F-box protein At3g07870-like isoform X1 [Malus
           domestica]
          Length = 457

 Score = 71.6 bits (174), Expect(2) = 1e-14
 Identities = 32/74 (43%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
 Frame = -3

Query: 321 KLHFSRAPTCFLLHSNRSFKRNSQNLLLVQLGLPSG--DAILRISNTPDFPNFGIELVGS 148
           K   S+ P C LL ++ +   N+  L LV L  PSG  D ++R+   P+ PNFG+++VGS
Sbjct: 81  KYLLSQTPDCLLLQNSSTRNPNTTGLFLVDLDKPSGKNDVVIRLPKDPNVPNFGVQIVGS 140

Query: 147 CNGLMCMYDRQKNG 106
           CNG +C+YDR  +G
Sbjct: 141 CNGFLCVYDRLNSG 154



 Score = 34.7 bits (78), Expect(2) = 1e-14
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = -2

Query: 100 YVSNPVIREYLSVPSAVDDQTFPLVCGLGFS 8
           Y+SNPVI E +++P    D  FP + G GFS
Sbjct: 157 YISNPVIGESITLPRFPKDIAFPFLYGFGFS 187


>ref|XP_009373589.1| PREDICTED: F-box protein At3g07870-like isoform X1 [Pyrus x
           bretschneideri]
          Length = 454

 Score = 71.6 bits (174), Expect(2) = 1e-14
 Identities = 32/74 (43%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
 Frame = -3

Query: 321 KLHFSRAPTCFLLHSNRSFKRNSQNLLLVQLGLPSG--DAILRISNTPDFPNFGIELVGS 148
           K   S+ P C LL ++ +   N+  L LV L  PSG  D ++R+   P+ PNFG+++VGS
Sbjct: 82  KYLLSQTPDCLLLQNSSTRNPNTAGLFLVDLDKPSGKNDVVIRLPKDPNVPNFGVQIVGS 141

Query: 147 CNGLMCMYDRQKNG 106
           CNG +C+YDR  +G
Sbjct: 142 CNGFLCVYDRLNSG 155



 Score = 34.7 bits (78), Expect(2) = 1e-14
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = -2

Query: 100 YVSNPVIREYLSVPSAVDDQTFPLVCGLGFS 8
           Y+SNPVI E +++P    D  FP + G GFS
Sbjct: 158 YISNPVIGESITLPRFPKDIAFPFLYGFGFS 188


>ref|XP_009373590.1| PREDICTED: F-box protein At3g07870-like isoform X2 [Pyrus x
           bretschneideri]
          Length = 429

 Score = 71.6 bits (174), Expect(2) = 1e-14
 Identities = 32/74 (43%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
 Frame = -3

Query: 321 KLHFSRAPTCFLLHSNRSFKRNSQNLLLVQLGLPSG--DAILRISNTPDFPNFGIELVGS 148
           K   S+ P C LL ++ +   N+  L LV L  PSG  D ++R+   P+ PNFG+++VGS
Sbjct: 82  KYLLSQTPDCLLLQNSSTRNPNTAGLFLVDLDKPSGKNDVVIRLPKDPNVPNFGVQIVGS 141

Query: 147 CNGLMCMYDRQKNG 106
           CNG +C+YDR  +G
Sbjct: 142 CNGFLCVYDRLNSG 155



 Score = 34.7 bits (78), Expect(2) = 1e-14
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = -2

Query: 100 YVSNPVIREYLSVPSAVDDQTFPLVCGLGFS 8
           Y+SNPVI E +++P    D  FP + G GFS
Sbjct: 158 YISNPVIGESITLPRFPKDIAFPFLYGFGFS 188


>ref|XP_008380450.1| PREDICTED: F-box protein At3g07870-like isoform X2 [Malus
           domestica]
          Length = 410

 Score = 71.6 bits (174), Expect(2) = 1e-14
 Identities = 32/74 (43%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
 Frame = -3

Query: 321 KLHFSRAPTCFLLHSNRSFKRNSQNLLLVQLGLPSG--DAILRISNTPDFPNFGIELVGS 148
           K   S+ P C LL ++ +   N+  L LV L  PSG  D ++R+   P+ PNFG+++VGS
Sbjct: 81  KYLLSQTPDCLLLQNSSTRNPNTTGLFLVDLDKPSGKNDVVIRLPKDPNVPNFGVQIVGS 140

Query: 147 CNGLMCMYDRQKNG 106
           CNG +C+YDR  +G
Sbjct: 141 CNGFLCVYDRLNSG 154



 Score = 34.7 bits (78), Expect(2) = 1e-14
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = -2

Query: 100 YVSNPVIREYLSVPSAVDDQTFPLVCGLGFS 8
           Y+SNPVI E +++P    D  FP + G GFS
Sbjct: 157 YISNPVIGESITLPRFPKDIAFPFLYGFGFS 187


>ref|XP_009373591.1| PREDICTED: F-box protein At3g07870-like isoform X3 [Pyrus x
           bretschneideri]
          Length = 399

 Score = 71.6 bits (174), Expect(2) = 1e-14
 Identities = 32/74 (43%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
 Frame = -3

Query: 321 KLHFSRAPTCFLLHSNRSFKRNSQNLLLVQLGLPSG--DAILRISNTPDFPNFGIELVGS 148
           K   S+ P C LL ++ +   N+  L LV L  PSG  D ++R+   P+ PNFG+++VGS
Sbjct: 82  KYLLSQTPDCLLLQNSSTRNPNTAGLFLVDLDKPSGKNDVVIRLPKDPNVPNFGVQIVGS 141

Query: 147 CNGLMCMYDRQKNG 106
           CNG +C+YDR  +G
Sbjct: 142 CNGFLCVYDRLNSG 155



 Score = 34.7 bits (78), Expect(2) = 1e-14
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = -2

Query: 100 YVSNPVIREYLSVPSAVDDQTFPLVCGLGFS 8
           Y+SNPVI E +++P    D  FP + G GFS
Sbjct: 158 YISNPVIGESITLPRFPKDIAFPFLYGFGFS 188


>ref|XP_008380451.1| PREDICTED: F-box protein At3g07870-like isoform X3 [Malus
           domestica]
          Length = 397

 Score = 71.6 bits (174), Expect(2) = 1e-14
 Identities = 32/74 (43%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
 Frame = -3

Query: 321 KLHFSRAPTCFLLHSNRSFKRNSQNLLLVQLGLPSG--DAILRISNTPDFPNFGIELVGS 148
           K   S+ P C LL ++ +   N+  L LV L  PSG  D ++R+   P+ PNFG+++VGS
Sbjct: 81  KYLLSQTPDCLLLQNSSTRNPNTTGLFLVDLDKPSGKNDVVIRLPKDPNVPNFGVQIVGS 140

Query: 147 CNGLMCMYDRQKNG 106
           CNG +C+YDR  +G
Sbjct: 141 CNGFLCVYDRLNSG 154



 Score = 34.7 bits (78), Expect(2) = 1e-14
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = -2

Query: 100 YVSNPVIREYLSVPSAVDDQTFPLVCGLGFS 8
           Y+SNPVI E +++P    D  FP + G GFS
Sbjct: 157 YISNPVIGESITLPRFPKDIAFPFLYGFGFS 187


>ref|XP_007221317.1| hypothetical protein PRUPE_ppa020265mg [Prunus persica]
           gi|462417951|gb|EMJ22516.1| hypothetical protein
           PRUPE_ppa020265mg [Prunus persica]
          Length = 325

 Score = 65.5 bits (158), Expect(2) = 2e-12
 Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
 Frame = -3

Query: 321 KLHFSRAPTCFLLHSNRSFKRNSQNLLLVQLGLPSG--DAILRISNTPDFPNFGIELVGS 148
           K  FS  PTC LL ++ S   NS  L L+ L   S   D ++++   P+ P  G+++VGS
Sbjct: 46  KYLFSETPTCLLLQNSSSRNPNSSGLFLIDLDNASNRNDVVIKLHKDPNVPTLGVQIVGS 105

Query: 147 CNGLMCMYDRQKNG 106
           CNG +C+YDR   G
Sbjct: 106 CNGFLCLYDRINYG 119



 Score = 32.7 bits (73), Expect(2) = 2e-12
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = -2

Query: 100 YVSNPVIREYLSVPSAVDDQTFPLVCGLGF 11
           YVSNPV+ E L++P    +  FP + G GF
Sbjct: 122 YVSNPVLGESLTLPKLPKEIDFPFLSGFGF 151


>ref|XP_002316992.2| hypothetical protein POPTR_0011s14030g [Populus trichocarpa]
           gi|550328360|gb|EEE97604.2| hypothetical protein
           POPTR_0011s14030g [Populus trichocarpa]
          Length = 433

 Score = 49.7 bits (117), Expect(2) = 3e-06
 Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
 Frame = -3

Query: 321 KLHFSRAPTCFLLHSNRSFKRNSQNLLLVQL-----GLPSGDAILRISNTPDFPNFGIEL 157
           +LH  R+PT  L+      ++ S  +LLV++       P    I+R+  T +FP+  + +
Sbjct: 77  RLHLERSPTTLLIQKTPFERKESTEMLLVEIVEEDISKPFYIEIIRLFPTKNFPDTDVRI 136

Query: 156 VGSCNGLMCMYD 121
           + SCNGL+C+Y+
Sbjct: 137 LNSCNGLLCLYE 148



 Score = 27.7 bits (60), Expect(2) = 3e-06
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -2

Query: 100 YVSNPVIREYLSVPSAVDDQTFPLVCGLGFS 8
           +V NPV+ EY+ +P    D+ F      GFS
Sbjct: 159 HVCNPVLGEYIDIPVVNTDKKFEHHLAFGFS 189


>ref|XP_011030815.1| PREDICTED: F-box protein At3g07870-like [Populus euphratica]
          Length = 412

 Score = 48.1 bits (113), Expect(2) = 9e-06
 Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
 Frame = -3

Query: 321 KLHFSRAPTCFLLHSNRSFKRNSQNLLLVQL-----GLPSGDAILRISNTPDFPNFGIEL 157
           +LH  R+PT  L+      ++ S  +LL+++       P    I+R+    +FP+  + +
Sbjct: 77  RLHLERSPTTLLIQKTPFVRKESTEMLLIEIVEEDISKPFYIEIIRLFPAKNFPDTDVRI 136

Query: 156 VGSCNGLMCMYD 121
           + SCNGL+C+Y+
Sbjct: 137 LNSCNGLLCLYE 148



 Score = 27.7 bits (60), Expect(2) = 9e-06
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -2

Query: 100 YVSNPVIREYLSVPSAVDDQTFPLVCGLGFS 8
           +V NPV+ EY+ +P    D+ F      GFS
Sbjct: 159 HVCNPVLGEYIDIPVVNTDKKFEHHLAFGFS 189


Top