BLASTX nr result
ID: Forsythia22_contig00055889
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00055889
(695 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CDP18164.1| unnamed protein product [Coffea canephora] 285 2e-74
ref|XP_002277337.2| PREDICTED: pentatricopeptide repeat-containi... 265 1e-68
ref|XP_008241840.1| PREDICTED: pentatricopeptide repeat-containi... 263 5e-68
ref|XP_007047218.1| Pentatricopeptide repeat-containing protein,... 261 2e-67
ref|XP_010680413.1| PREDICTED: pentatricopeptide repeat-containi... 251 3e-64
ref|XP_007204497.1| hypothetical protein PRUPE_ppa019362mg [Prun... 251 4e-64
ref|XP_010263222.1| PREDICTED: pentatricopeptide repeat-containi... 250 6e-64
ref|XP_009617297.1| PREDICTED: pentatricopeptide repeat-containi... 243 7e-62
ref|XP_009366958.1| PREDICTED: pentatricopeptide repeat-containi... 239 1e-60
ref|XP_009787964.1| PREDICTED: pentatricopeptide repeat-containi... 238 2e-60
ref|XP_008340659.1| PREDICTED: pentatricopeptide repeat-containi... 237 4e-60
ref|XP_008344308.1| PREDICTED: pentatricopeptide repeat-containi... 236 7e-60
ref|XP_002523554.1| pentatricopeptide repeat-containing protein,... 232 1e-58
ref|XP_004233437.1| PREDICTED: pentatricopeptide repeat-containi... 229 1e-57
ref|XP_006360219.1| PREDICTED: pentatricopeptide repeat-containi... 227 6e-57
ref|XP_010043756.1| PREDICTED: pentatricopeptide repeat-containi... 209 2e-51
ref|XP_003551036.1| PREDICTED: pentatricopeptide repeat-containi... 200 6e-49
ref|XP_007155935.1| hypothetical protein PHAVU_003G244800g [Phas... 193 9e-47
ref|XP_012079207.1| PREDICTED: pentatricopeptide repeat-containi... 192 2e-46
ref|XP_012573667.1| PREDICTED: pentatricopeptide repeat-containi... 187 6e-45
>emb|CDP18164.1| unnamed protein product [Coffea canephora]
Length = 639
Score = 285 bits (729), Expect = 2e-74
Identities = 139/216 (64%), Positives = 166/216 (76%), Gaps = 3/216 (1%)
Frame = -2
Query: 640 WKFQRTISSLPVPNF---TPLQFNHLLQLCSNSRSLNPGKQTHKQIIVHGLDHNPFVTTK 470
W F+R ISS+ NF TP+Q NHLLQLCSNS++LN GKQ H+QII++GL N F++TK
Sbjct: 5 WTFRRQISSVNTTNFKLPTPVQLNHLLQLCSNSKALNQGKQAHQQIIINGLQQNYFMSTK 64
Query: 469 LILFYADCNDIETTRVLFDRLPQPNVFACTSIISFYSRNGMFDECIGAYIGMKSKNVLPD 290
L+ YADCN IE R LFD+L +PNVFA T+II+FYSRNG+F+ECI Y MK K VLPD
Sbjct: 65 LVQMYADCNKIEIARRLFDKLSEPNVFAWTAIIAFYSRNGIFNECIFTYKEMKLKGVLPD 124
Query: 289 GYVFPKVLRACTVAMCLETGVQVQKDVIQCGAESNTEVCNCLIDMYSKCGCIESARRVFD 110
YVFPK L+AC V++ LE G+Q+ KDVI CG ESN +VCN LIDMYSKCG + S R VFD
Sbjct: 125 NYVFPKALKACAVSLHLEVGIQLHKDVIVCGVESNVQVCNALIDMYSKCGELGSGRLVFD 184
Query: 109 SMAGRDLLSWNTMISGYVYNGILQMAVEILGLMRLD 2
M GRDLLSWN MISGYVYN ++AV +LG MRLD
Sbjct: 185 LMVGRDLLSWNAMISGYVYNEFAELAVGMLGSMRLD 220
Score = 84.7 bits (208), Expect = 4e-14
Identities = 55/187 (29%), Positives = 88/187 (47%), Gaps = 2/187 (1%)
Frame = -2
Query: 574 LLQLCSNSRSLNPGKQTHKQIIVHGLDHNPFVTT--KLILFYADCNDIETTRVLFDRLPQ 401
+L C +S L G++ H I L + + + L+ YA C + +F +
Sbjct: 299 VLAACQHSGVLRFGQEIHASGIKVQLGNAFYKSAGPALVALYAKCGRTQDVEHVFGLMDT 358
Query: 400 PNVFACTSIISFYSRNGMFDECIGAYIGMKSKNVLPDGYVFPKVLRACTVAMCLETGVQV 221
+V ++I ++ G D + + M+S + D +L C L+ G Q+
Sbjct: 359 SDVVTWNAMILGFAELGRVDSAVKCFTDMQSMGIKNDHTTVSTLLPVCD----LKLGKQI 414
Query: 220 QKDVIQCGAESNTEVCNCLIDMYSKCGCIESARRVFDSMAGRDLLSWNTMISGYVYNGIL 41
+I+ + VCN LI MY+KCG ++ A VF M RDL+SWNTMI + NG
Sbjct: 415 HAYIIKDNFTLASPVCNALIHMYAKCGDVDIAYSVFSQMESRDLVSWNTMIRAFGMNGCG 474
Query: 40 QMAVEIL 20
Q AV++L
Sbjct: 475 QAAVKLL 481
Score = 59.3 bits (142), Expect = 2e-06
Identities = 48/193 (24%), Positives = 91/193 (47%), Gaps = 6/193 (3%)
Frame = -2
Query: 583 FNHLLQLCSNSRSLNPGKQTHKQIIVHGLDHNPFVTTKLILFYADCNDIETTRVLFDRLP 404
F L+ C+ S L G Q HK +IV G++ N V LI Y+ C ++ + R++FD +
Sbjct: 128 FPKALKACAVSLHLEVGIQLHKDVIVCGVESNVQVCNALIDMYSKCGELGSGRLVFDLMV 187
Query: 403 QPNVFACTSIISFYSRNGMFDECIGAYIGMKSKNVLPDGYVFPKVLRA-CTVAMCLETGV 227
++ + ++IS Y N + +G M+ + PD + V+ A C + C + +
Sbjct: 188 GRDLLSWNAMISGYVYNEFAELAVGMLGSMRLDGMEPDIVAWNSVMDAYCRMGQC-DDAL 246
Query: 226 QVQKDVIQCGAESNTEVCNCLIDMYSKCGCIESARRVFDSMAGR-----DLLSWNTMISG 62
++ + + E LI YS+ G A +F +M R D+ +++++
Sbjct: 247 KIFRQI----EEPTVISWTILISGYSRIGKHVEALDLFRTMVRRGKVCPDVDCLSSVLAA 302
Query: 61 YVYNGILQMAVEI 23
++G+L+ EI
Sbjct: 303 CQHSGVLRFGQEI 315
Score = 57.0 bits (136), Expect = 1e-05
Identities = 43/184 (23%), Positives = 79/184 (42%), Gaps = 2/184 (1%)
Frame = -2
Query: 574 LLQLCSNSRSLNPGKQTHKQIIVHGLDHNPFVTTKLILFYADCNDIETTRVLFDRLPQPN 395
LL +C L GKQ H II V LI YA C D++ +F ++ +
Sbjct: 402 LLPVCD----LKLGKQIHAYIIKDNFTLASPVCNALIHMYAKCGDVDIAYSVFSQMESRD 457
Query: 394 VFACTSIISFYSRNGMFDECIGAYIGMKSKNVLPDGYVFPKVLRACTVAMCLETGVQV-Q 218
+ + ++I + NG + M S V P F VL AC+ + + G+++
Sbjct: 458 LVSWNTMIRAFGMNGCGQAAVKLLEEMCSTGVSPSSLTFASVLSACSHSGLVNEGLKIFD 517
Query: 217 KDVIQCGAESNTEVCNCLIDMYSKCGCIESARRVFDSMA-GRDLLSWNTMISGYVYNGIL 41
+ G + T CL+D+ ++ G ++ A M G D +W ++++ + +
Sbjct: 518 RMSTDFGFKPQTGHFTCLVDLLARAGQLDDAVDFIRKMPHGPDKRNWGSILAASLEQQSI 577
Query: 40 QMAV 29
++ V
Sbjct: 578 RIGV 581
>ref|XP_002277337.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Vitis vinifera]
Length = 634
Score = 265 bits (678), Expect = 1e-68
Identities = 128/218 (58%), Positives = 161/218 (73%), Gaps = 3/218 (1%)
Frame = -2
Query: 649 MRIWKFQRTISSLPVPN---FTPLQFNHLLQLCSNSRSLNPGKQTHKQIIVHGLDHNPFV 479
M+++ F+R ISSLP N + Q NHLLQLCSNS++L+ GKQ H+ II+ GLDH+PF+
Sbjct: 1 MKVFLFKRAISSLPTSNPNLLSSFQLNHLLQLCSNSKALHQGKQLHQHIILCGLDHHPFM 60
Query: 478 TTKLILFYADCNDIETTRVLFDRLPQPNVFACTSIISFYSRNGMFDECIGAYIGMKSKNV 299
TKL+ YADC D+ + + LFD+L QPNVFA T+I+ FYSRNG+ DEC+ Y MK K V
Sbjct: 61 LTKLVQMYADCGDLGSAQALFDKLSQPNVFAWTAILGFYSRNGLSDECVRTYSEMKLKGV 120
Query: 298 LPDGYVFPKVLRACTVAMCLETGVQVQKDVIQCGAESNTEVCNCLIDMYSKCGCIESARR 119
LPD YVFPKV RAC + LE G+QV KDV+ CG E + +VCN LIDMYSK G + S RR
Sbjct: 121 LPDKYVFPKVFRACGQLLWLEVGIQVHKDVVICGCEFDLQVCNSLIDMYSKSGDVGSGRR 180
Query: 118 VFDSMAGRDLLSWNTMISGYVYNGILQMAVEILGLMRL 5
VFD M RD+LSWN+MISGYV NG L+ +VE+L MR+
Sbjct: 181 VFDEMVERDVLSWNSMISGYVCNGFLEFSVELLASMRI 218
Score = 79.7 bits (195), Expect = 1e-12
Identities = 55/188 (29%), Positives = 93/188 (49%), Gaps = 3/188 (1%)
Frame = -2
Query: 574 LLQLCSNSRSLNPGKQTHKQIIVHGLDHNPFVTTK---LILFYADCNDIETTRVLFDRLP 404
+L C + +L G++ H I +D + F + L+ Y C I+ +F+ +
Sbjct: 298 VLVSCRHLGALVCGQEIHGYGI-RSVDSSSFYKSAGAALLTMYVKCKRIQDALNVFELMD 356
Query: 403 QPNVFACTSIISFYSRNGMFDECIGAYIGMKSKNVLPDGYVFPKVLRACTVAMCLETGVQ 224
+ +V ++I + M + + M+ ++ + VL AC L++G Q
Sbjct: 357 RFDVVTWNAMILGFVDLEMGHLALECFSKMQRSGIMNNQITISTVLPACD----LKSGKQ 412
Query: 223 VQKDVIQCGAESNTEVCNCLIDMYSKCGCIESARRVFDSMAGRDLLSWNTMISGYVYNGI 44
V + + S V N LI MYSKCGCI +A +F +M RDL+SWNTMI G+ +G+
Sbjct: 413 VHAYITKNSFSSVIPVWNALIHMYSKCGCIGTAYSIFSNMISRDLVSWNTMIGGFGMHGL 472
Query: 43 LQMAVEIL 20
Q A+++L
Sbjct: 473 GQFALQLL 480
Score = 63.9 bits (154), Expect = 8e-08
Identities = 42/141 (29%), Positives = 73/141 (51%), Gaps = 3/141 (2%)
Frame = -2
Query: 421 LFDRLPQPNVFACTSIISFYSRNGMFDECIGAYIGMKSKNV-LPDGYVFPKVLRACTVAM 245
+F+++ +PN+ + T+++S YSR G ++ +G + M S+ V PD VL +C
Sbjct: 247 IFEQIKEPNIISLTTLVSGYSRIGNHEKSLGIFREMMSRRVAFPDLDSLSSVLVSCRHLG 306
Query: 244 CLETGVQVQKDVIQCGAESN--TEVCNCLIDMYSKCGCIESARRVFDSMAGRDLLSWNTM 71
L G ++ I+ S+ L+ MY KC I+ A VF+ M D+++WN M
Sbjct: 307 ALVCGQEIHGYGIRSVDSSSFYKSAGAALLTMYVKCKRIQDALNVFELMDRFDVVTWNAM 366
Query: 70 ISGYVYNGILQMAVEILGLMR 8
I G+V + +A+E M+
Sbjct: 367 ILGFVDLEMGHLALECFSKMQ 387
Score = 60.8 bits (146), Expect = 7e-07
Identities = 53/212 (25%), Positives = 92/212 (43%), Gaps = 8/212 (3%)
Frame = -2
Query: 628 RTISSLPVPNFTPLQ--FNHLLQLCSNSRSLNPGKQTHKQIIVHGLDHNPFVTTKLILFY 455
RT S + + P + F + + C L G Q HK +++ G + + V LI Y
Sbjct: 110 RTYSEMKLKGVLPDKYVFPKVFRACGQLLWLEVGIQVHKDVVICGCEFDLQVCNSLIDMY 169
Query: 454 ADCNDIETTRVLFDRLPQPNVFACTSIISFYSRNGMFDECIGAYIGMKSKNVLPDGYVFP 275
+ D+ + R +FD + + +V + S+IS Y NG + + M+ + PD +
Sbjct: 170 SKSGDVGSGRRVFDEMVERDVLSWNSMISGYVCNGFLEFSVELLASMRIRGFEPDMVTWN 229
Query: 274 KVLRA-CTVAMCLETGVQVQKDVIQCGAESNTEVCNCLIDMYSKCGCIESARRVFDSMAG 98
V+ A C + +C E ++ + E N L+ YS+ G E + +F M
Sbjct: 230 TVMDAYCRMGLCDEAW-----EIFEQIKEPNIISLTTLVSGYSRIGNHEKSLGIFREMMS 284
Query: 97 R-----DLLSWNTMISGYVYNGILQMAVEILG 17
R DL S ++++ + G L EI G
Sbjct: 285 RRVAFPDLDSLSSVLVSCRHLGALVCGQEIHG 316
>ref|XP_008241840.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Prunus mume]
Length = 667
Score = 263 bits (673), Expect = 5e-68
Identities = 128/218 (58%), Positives = 161/218 (73%), Gaps = 3/218 (1%)
Frame = -2
Query: 649 MRIWKFQRTISSLPVPNF---TPLQFNHLLQLCSNSRSLNPGKQTHKQIIVHGLDHNPFV 479
+R+W+ R IS L N +P + + LQLCS+S+SLN GK H+++I GLD NPF+
Sbjct: 22 LRVWRAHRAISILSTTNSKAPSPSELSVYLQLCSHSKSLNQGKHAHQKMIQCGLDQNPFI 81
Query: 478 TTKLILFYADCNDIETTRVLFDRLPQPNVFACTSIISFYSRNGMFDECIGAYIGMKSKNV 299
TKL+ YADC+D+ ++R LFD L +PNVFA T+I+ FYSR+GM +EC+GAY+ M +V
Sbjct: 82 VTKLVQMYADCDDLVSSRKLFDNLLKPNVFAWTAILGFYSRHGMHEECVGAYVEMILNDV 141
Query: 298 LPDGYVFPKVLRACTVAMCLETGVQVQKDVIQCGAESNTEVCNCLIDMYSKCGCIESARR 119
LPDGYVFPKVLRAC CL+ G+ V KDVI CG E N +VCN LIDMYSKC I SA+R
Sbjct: 142 LPDGYVFPKVLRACAQLSCLKVGIVVHKDVIICGFELNLQVCNSLIDMYSKCDNIGSAKR 201
Query: 118 VFDSMAGRDLLSWNTMISGYVYNGILQMAVEILGLMRL 5
VFD MAGRDL SWN+MISGYVYNG+L +AVE+ M L
Sbjct: 202 VFDEMAGRDLWSWNSMISGYVYNGLLGLAVELFDCMNL 239
Score = 80.1 bits (196), Expect = 1e-12
Identities = 60/202 (29%), Positives = 96/202 (47%), Gaps = 2/202 (0%)
Frame = -2
Query: 619 SSLPVPNFTPLQFNHLLQLCSNSRSLNPGKQTHKQIIVH--GLDHNPFVTTKLILFYADC 446
SS+ P+ L + +L C + SL GK+ H I G+ L+ YA+C
Sbjct: 306 SSMVDPDLDSL--STVLVSCRHLGSLLNGKEIHGYGIKRESGIAFYHSAGPALLTMYANC 363
Query: 445 NDIETTRVLFDRLPQPNVFACTSIISFYSRNGMFDECIGAYIGMKSKNVLPDGYVFPKVL 266
I +F + +V + ++I + G+ D + ++ M+ + D +L
Sbjct: 364 RRIHDATNVFKLMDPAHVVSWNAMILGFIDLGLEDLALDSFRRMQRARINVDQTTISTIL 423
Query: 265 RACTVAMCLETGVQVQKDVIQCGAESNTEVCNCLIDMYSKCGCIESARRVFDSMAGRDLL 86
AC L+ G Q+ + + + V N LI MYSKCGCI SA VF +M RDL+
Sbjct: 424 PACN----LKFGKQIHAFIRKISFDLVVPVWNALIHMYSKCGCIGSAYSVFSNMINRDLV 479
Query: 85 SWNTMISGYVYNGILQMAVEIL 20
SWN+MI G+ +G + A+ +L
Sbjct: 480 SWNSMIGGFGMHGHGRAALHLL 501
Score = 64.3 bits (155), Expect = 6e-08
Identities = 45/187 (24%), Positives = 84/187 (44%)
Frame = -2
Query: 583 FNHLLQLCSNSRSLNPGKQTHKQIIVHGLDHNPFVTTKLILFYADCNDIETTRVLFDRLP 404
F +L+ C+ L G HK +I+ G + N V LI Y+ C++I + + +FD +
Sbjct: 148 FPKVLRACAQLSCLKVGIVVHKDVIICGFELNLQVCNSLIDMYSKCDNIGSAKRVFDEMA 207
Query: 403 QPNVFACTSIISFYSRNGMFDECIGAYIGMKSKNVLPDGYVFPKVLRACTVAMCLETGVQ 224
++++ S+IS Y NG+ +G+ A + C+ G
Sbjct: 208 GRDLWSWNSMISGYVYNGL--------LGL-----------------AVELFDCMNLG-- 240
Query: 223 VQKDVIQCGAESNTEVCNCLIDMYSKCGCIESARRVFDSMAGRDLLSWNTMISGYVYNGI 44
G + + N ++D Y + G A+R+F+ + +++SW T+ISGY G
Sbjct: 241 --------GCKPDIVTLNTVMDAYCRMGHCNKAKRIFEQIKEPNIISWTTLISGYSRIGS 292
Query: 43 LQMAVEI 23
+ ++ I
Sbjct: 293 HEASLSI 299
>ref|XP_007047218.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
cacao] gi|508699479|gb|EOX91375.1| Pentatricopeptide
repeat-containing protein, putative [Theobroma cacao]
Length = 635
Score = 261 bits (668), Expect = 2e-67
Identities = 126/216 (58%), Positives = 155/216 (71%)
Frame = -2
Query: 649 MRIWKFQRTISSLPVPNFTPLQFNHLLQLCSNSRSLNPGKQTHKQIIVHGLDHNPFVTTK 470
M +W+ Q +S+L P + Q N+LLQLCS S+SL+ GKQ H QII +G N F+ TK
Sbjct: 1 MNVWRSQGALSTLSKPRISLSQLNNLLQLCSKSKSLSQGKQIHPQIISNGSHQNTFIITK 60
Query: 469 LILFYADCNDIETTRVLFDRLPQPNVFACTSIISFYSRNGMFDECIGAYIGMKSKNVLPD 290
L+ YADC+D+ + LFDRLPQPNVF+ T+I+ YSR+GM+ +CI +Y MK VLPD
Sbjct: 61 LVQMYADCDDLVSANKLFDRLPQPNVFSWTAILGLYSRHGMYRKCIESYCEMKMSGVLPD 120
Query: 289 GYVFPKVLRACTVAMCLETGVQVQKDVIQCGAESNTEVCNCLIDMYSKCGCIESARRVFD 110
G+VFPKVLRA +CLETG+ V KDVI CG E EVCN LIDMY +CG + SARRVFD
Sbjct: 121 GFVFPKVLRASVQGLCLETGICVHKDVIVCGCEFYLEVCNSLIDMYGRCGDLTSARRVFD 180
Query: 109 SMAGRDLLSWNTMISGYVYNGILQMAVEILGLMRLD 2
M GRDL SWN MISGYV NG+L+ +EIL MRLD
Sbjct: 181 EMVGRDLFSWNLMISGYVGNGMLEFGLEILNCMRLD 216
Score = 70.1 bits (170), Expect = 1e-09
Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 4/185 (2%)
Frame = -2
Query: 562 CSNSRSLNPGKQTH----KQIIVHGLDHNPFVTTKLILFYADCNDIETTRVLFDRLPQPN 395
C + +L GK+ H K +I G L+ ++ C +F+ + + +
Sbjct: 299 CRHLGALLSGKEIHGFGIKMMI--GRSFYGSAGPALLTLHSKCGRSRDAGNIFELMDKSD 356
Query: 394 VFACTSIISFYSRNGMFDECIGAYIGMKSKNVLPDGYVFPKVLRACTVAMCLETGVQVQK 215
++I + G+ + + M+ + D VL C L G Q+
Sbjct: 357 TVTWNAMILGFVDRGLGHMAVDCFGEMQRMGIKNDQTTICTVLPVCE----LRQGKQLHA 412
Query: 214 DVIQCGAESNTEVCNCLIDMYSKCGCIESARRVFDSMAGRDLLSWNTMISGYVYNGILQM 35
+ + ++S + N L+ MYSKCG I SA VF +M RDL+SWNTMI G+ +G+ +
Sbjct: 413 YIRRQYSDSICPIWNALVHMYSKCGSIGSAYSVFSNMVARDLVSWNTMIGGFALHGLGEA 472
Query: 34 AVEIL 20
A+++L
Sbjct: 473 ALQLL 477
Score = 67.4 bits (163), Expect = 7e-09
Identities = 43/141 (30%), Positives = 71/141 (50%), Gaps = 3/141 (2%)
Frame = -2
Query: 421 LFDRLPQPNVFACTSIISFYSRNGMFDECIGAYIGMKSKNV-LPDGYVFPKVLRACTVAM 245
+F+ + +PN+ + T++IS YSR G + + + M +K V LPD L +C
Sbjct: 244 IFEYIKEPNIISWTTLISGYSRIGQHESSLRIFKDMLNKGVVLPDLDCLSSALVSCRHLG 303
Query: 244 CLETGVQVQKDVIQC--GAESNTEVCNCLIDMYSKCGCIESARRVFDSMAGRDLLSWNTM 71
L +G ++ I+ G L+ ++SKCG A +F+ M D ++WN M
Sbjct: 304 ALLSGKEIHGFGIKMMIGRSFYGSAGPALLTLHSKCGRSRDAGNIFELMDKSDTVTWNAM 363
Query: 70 ISGYVYNGILQMAVEILGLMR 8
I G+V G+ MAV+ G M+
Sbjct: 364 ILGFVDRGLGHMAVDCFGEMQ 384
>ref|XP_010680413.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
chloroplastic-like [Beta vulgaris subsp. vulgaris]
gi|870857787|gb|KMT09335.1| hypothetical protein
BVRB_6g134300 [Beta vulgaris subsp. vulgaris]
Length = 640
Score = 251 bits (641), Expect = 3e-64
Identities = 122/218 (55%), Positives = 153/218 (70%), Gaps = 3/218 (1%)
Frame = -2
Query: 649 MRIWKFQRTISSLPVPNFTPL---QFNHLLQLCSNSRSLNPGKQTHKQIIVHGLDHNPFV 479
MR+W R SS P P F L + HLLQ+CSNSR+L KQTH+QII HGL N FV
Sbjct: 1 MRLWLLGRQFSSFPTPTFDLLSSSKLTHLLQICSNSRALAQAKQTHQQIIQHGLHQNQFV 60
Query: 478 TTKLILFYADCNDIETTRVLFDRLPQPNVFACTSIISFYSRNGMFDECIGAYIGMKSKNV 299
TKL+ YA+C+ + LFD LP+PNVFA T++++F+SRNG+F EC+ Y M+ V
Sbjct: 61 ITKLVQSYAECDHFGYAQKLFDELPEPNVFAWTALLAFHSRNGLFIECLQLYAAMRFMGV 120
Query: 298 LPDGYVFPKVLRACTVAMCLETGVQVQKDVIQCGAESNTEVCNCLIDMYSKCGCIESARR 119
LPD YVFPK+LRAC LETG + K+ I CGAE N +VC+ LIDMYSKC ++SAR
Sbjct: 121 LPDQYVFPKILRACAQLSALETGAMIHKEAIVCGAELNVQVCSSLIDMYSKCKDVKSARW 180
Query: 118 VFDSMAGRDLLSWNTMISGYVYNGILQMAVEILGLMRL 5
+FD+MA RDLLSWN MISGYV NG L++A+E+ G M L
Sbjct: 181 IFDNMAVRDLLSWNAMISGYVLNGFLELALELFGSMTL 218
Score = 67.8 bits (164), Expect = 6e-09
Identities = 44/150 (29%), Positives = 74/150 (49%)
Frame = -2
Query: 469 LILFYADCNDIETTRVLFDRLPQPNVFACTSIISFYSRNGMFDECIGAYIGMKSKNVLPD 290
L+ Y+ C+ + R +F+ + + ++ ++I M + + M+ V +
Sbjct: 335 LLTMYSKCSRVHDMRNVFELMDKFDMVTWNAMIFGLVDLAMGYSALETFTMMQIVGVKIN 394
Query: 289 GYVFPKVLRACTVAMCLETGVQVQKDVIQCGAESNTEVCNCLIDMYSKCGCIESARRVFD 110
+L C L++G Q+ + + S V N LI MY KCG I+SA VF
Sbjct: 395 QTTISTILPICD----LKSGKQLHAYIFRNNLVSVVPVLNALISMYCKCGSIDSADLVFS 450
Query: 109 SMAGRDLLSWNTMISGYVYNGILQMAVEIL 20
+M RDL+SWNTMI G+ +G + A++IL
Sbjct: 451 NMPVRDLVSWNTMIGGFAMHGKGKAALQIL 480
Score = 67.4 bits (163), Expect = 7e-09
Identities = 43/175 (24%), Positives = 75/175 (42%)
Frame = -2
Query: 583 FNHLLQLCSNSRSLNPGKQTHKQIIVHGLDHNPFVTTKLILFYADCNDIETTRVLFDRLP 404
F +L+ C+ +L G HK+ IV G + N V + LI Y+ C D+++ R +FD +
Sbjct: 127 FPKILRACAQLSALETGAMIHKEAIVCGAELNVQVCSSLIDMYSKCKDVKSARWIFDNMA 186
Query: 403 QPNVFACTSIISFYSRNGMFDECIGAYIGMKSKNVLPDGYVFPKVLRACTVAMCLETGVQ 224
++ + ++IS Y NG LE ++
Sbjct: 187 VRDLLSWNAMISGYVLNGF-----------------------------------LELALE 211
Query: 223 VQKDVIQCGAESNTEVCNCLIDMYSKCGCIESARRVFDSMAGRDLLSWNTMISGY 59
+ + G E + N ++D Y + G + A +VF +A ++SW T+ SGY
Sbjct: 212 LFGSMTLMGVEPDLVTLNSVMDAYCRMGLCDEALKVFGHIAHPSVVSWTTLFSGY 266
>ref|XP_007204497.1| hypothetical protein PRUPE_ppa019362mg [Prunus persica]
gi|462400028|gb|EMJ05696.1| hypothetical protein
PRUPE_ppa019362mg [Prunus persica]
Length = 558
Score = 251 bits (640), Expect = 4e-64
Identities = 125/218 (57%), Positives = 155/218 (71%), Gaps = 3/218 (1%)
Frame = -2
Query: 649 MRIWKFQRTISSLPVPNF---TPLQFNHLLQLCSNSRSLNPGKQTHKQIIVHGLDHNPFV 479
MR+W+ R IS L N +P + LQLCSNS+SLN GK H++II GLD NPF+
Sbjct: 1 MRVWRAHRAISILSTTNSKAPSPSELGVYLQLCSNSKSLNQGKHVHQKIIQCGLDQNPFI 60
Query: 478 TTKLILFYADCNDIETTRVLFDRLPQPNVFACTSIISFYSRNGMFDECIGAYIGMKSKNV 299
TKL+ YADC+D+ ++ LFD L +PNVFA T+I+ FYSR+GM +EC+ AY+ M +V
Sbjct: 61 VTKLVQMYADCDDLVSSWKLFDNLLKPNVFAWTAILGFYSRHGMHEECVRAYVEMILNDV 120
Query: 298 LPDGYVFPKVLRACTVAMCLETGVQVQKDVIQCGAESNTEVCNCLIDMYSKCGCIESARR 119
LPDGYVFPKVLRAC + L+ G+ V KDVI CG N +VCN LIDMYSKC I SA+R
Sbjct: 121 LPDGYVFPKVLRACAQLLRLKVGIVVHKDVIICGLNLNLQVCNSLIDMYSKCEDIGSAKR 180
Query: 118 VFDSMAGRDLLSWNTMISGYVYNGILQMAVEILGLMRL 5
VFD M GRDL SWN+MISGYV NG+L +AVE+ M L
Sbjct: 181 VFDEMVGRDLWSWNSMISGYVCNGLLGLAVELFDCMNL 218
Score = 73.6 bits (179), Expect = 1e-10
Identities = 53/163 (32%), Positives = 81/163 (49%), Gaps = 20/163 (12%)
Frame = -2
Query: 448 CNDIETTRVLFDRLPQPNVFACTSIISFYSRNGMFDECIGAYIGMKSKNVL-PDGYVFPK 272
CN E TR+ F+++ +PN+ + T++IS YSR G + + + M +++ PD
Sbjct: 241 CN--EATRI-FEQIKEPNIISWTTLISGYSRIGSHEASLRIFRDMIGSSMVDPDLDSLST 297
Query: 271 VLRACTVAMCLETGVQVQKDVIQ-------------------CGAESNTEVCNCLIDMYS 149
VL +C L G ++ I+ + V N LI MYS
Sbjct: 298 VLVSCRHLGSLLNGKEIHGYGIKRESGIAFYHSAGPALLTMKISFDLVVPVWNALIHMYS 357
Query: 148 KCGCIESARRVFDSMAGRDLLSWNTMISGYVYNGILQMAVEIL 20
KCGCI SA VF +M RDL+SWN+MI G+ +G + A+ +L
Sbjct: 358 KCGCIGSAYSVFSNMINRDLVSWNSMIGGFGMHGHGRAALHLL 400
Score = 66.2 bits (160), Expect = 2e-08
Identities = 48/187 (25%), Positives = 83/187 (44%)
Frame = -2
Query: 583 FNHLLQLCSNSRSLNPGKQTHKQIIVHGLDHNPFVTTKLILFYADCNDIETTRVLFDRLP 404
F +L+ C+ L G HK +I+ GL+ N V LI Y+ C DI + + +FD +
Sbjct: 127 FPKVLRACAQLLRLKVGIVVHKDVIICGLNLNLQVCNSLIDMYSKCEDIGSAKRVFDEMV 186
Query: 403 QPNVFACTSIISFYSRNGMFDECIGAYIGMKSKNVLPDGYVFPKVLRACTVAMCLETGVQ 224
++++ S+IS Y NG+ +G+ A + C+ G
Sbjct: 187 GRDLWSWNSMISGYVCNGL--------LGL-----------------AVELFDCMNLG-- 219
Query: 223 VQKDVIQCGAESNTEVCNCLIDMYSKCGCIESARRVFDSMAGRDLLSWNTMISGYVYNGI 44
G E + N ++D Y + G A R+F+ + +++SW T+ISGY G
Sbjct: 220 --------GCEPDIVTLNTVMDAYCRMGHCNEATRIFEQIKEPNIISWTTLISGYSRIGS 271
Query: 43 LQMAVEI 23
+ ++ I
Sbjct: 272 HEASLRI 278
>ref|XP_010263222.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Nelumbo nucifera]
Length = 654
Score = 250 bits (638), Expect = 6e-64
Identities = 121/217 (55%), Positives = 157/217 (72%), Gaps = 3/217 (1%)
Frame = -2
Query: 649 MRIWKFQRTISSLPVPNF---TPLQFNHLLQLCSNSRSLNPGKQTHKQIIVHGLDHNPFV 479
MR W QR +SS + QFN LLQ CS+S +L G+Q H+QII+H L +PF
Sbjct: 1 MRTWILQRGVSSFSFSHLRIPAASQFNDLLQRCSDSVALKQGRQVHQQIILHELAFDPFT 60
Query: 478 TTKLILFYADCNDIETTRVLFDRLPQPNVFACTSIISFYSRNGMFDECIGAYIGMKSKNV 299
TKL+ YA CND+ + R+LFD LP+PNVFA TSIISFYSRNGMF EC+ Y MK + +
Sbjct: 61 VTKLVQMYAACNDLISARILFDELPRPNVFAWTSIISFYSRNGMFKECVRTYNEMKLQGI 120
Query: 298 LPDGYVFPKVLRACTVAMCLETGVQVQKDVIQCGAESNTEVCNCLIDMYSKCGCIESARR 119
PDGYVFPKVLRACT ++ L G+++ KD+I+ GAE N +VCN LIDMYSKCG +++A+R
Sbjct: 121 GPDGYVFPKVLRACTQSLSLAEGIRIHKDIIELGAEHNLQVCNSLIDMYSKCGDVQTAQR 180
Query: 118 VFDSMAGRDLLSWNTMISGYVYNGILQMAVEILGLMR 8
+F+ MA +DLL+WN+MISG+V N L +A+E L MR
Sbjct: 181 IFNGMAEKDLLTWNSMISGFVCNDFLDIAIEQLDAMR 217
Score = 80.1 bits (196), Expect = 1e-12
Identities = 51/150 (34%), Positives = 74/150 (49%)
Frame = -2
Query: 469 LILFYADCNDIETTRVLFDRLPQPNVFACTSIISFYSRNGMFDECIGAYIGMKSKNVLPD 290
L+ YA + R +F + + +V ++I G+ D I M+S+ + D
Sbjct: 335 LLTVYATSGRLRDARNVFQLMDKSDVVTWNAMILGLVHLGLGDLAIKYVREMQSRGLQYD 394
Query: 289 GYVFPKVLRACTVAMCLETGVQVQKDVIQCGAESNTEVCNCLIDMYSKCGCIESARRVFD 110
VL C L G Q+ + + +S V N LI+MYSKCGCI SA VF
Sbjct: 395 ETTVSTVLPVCD----LRFGKQIHAYIRRNALDSAISVWNALINMYSKCGCIRSAYTVFS 450
Query: 109 SMAGRDLLSWNTMISGYVYNGILQMAVEIL 20
M RD++SWNTMI GY NG + A+++L
Sbjct: 451 KMDSRDVVSWNTMIGGYGMNGCGKAALQLL 480
Score = 65.9 bits (159), Expect = 2e-08
Identities = 47/187 (25%), Positives = 79/187 (42%)
Frame = -2
Query: 583 FNHLLQLCSNSRSLNPGKQTHKQIIVHGLDHNPFVTTKLILFYADCNDIETTRVLFDRLP 404
F +L+ C+ S SL G + HK II G +HN V LI Y+ C D++T + +F+ +
Sbjct: 127 FPKVLRACTQSLSLAEGIRIHKDIIELGAEHNLQVCNSLIDMYSKCGDVQTAQRIFNGMA 186
Query: 403 QPNVFACTSIISFYSRNGMFDECIGAYIGMKSKNVLPDGYVFPKVLRACTVAMCLETGVQ 224
+ ++ S+IS + N D I M+S+ PD +
Sbjct: 187 EKDLLTWNSMISGFVCNDFLDIAIEQLDAMRSEGFEPDLVTW------------------ 228
Query: 223 VQKDVIQCGAESNTEVCNCLIDMYSKCGCIESARRVFDSMAGRDLLSWNTMISGYVYNGI 44
N ++D Y + G A +F+ + +++S T+ISGY G
Sbjct: 229 -----------------NTIMDAYCRMGLCNKALEIFEQIREPNIISLTTLISGYSRIGN 271
Query: 43 LQMAVEI 23
+M + I
Sbjct: 272 HEMPLVI 278
Score = 60.1 bits (144), Expect = 1e-06
Identities = 40/159 (25%), Positives = 70/159 (44%), Gaps = 2/159 (1%)
Frame = -2
Query: 535 GKQTHKQIIVHGLDHNPFVTTKLILFYADCNDIETTRVLFDRLPQPNVFACTSIISFYSR 356
GKQ H I + LD V LI Y+ C I + +F ++ +V + ++I Y
Sbjct: 410 GKQIHAYIRRNALDSAISVWNALINMYSKCGCIRSAYTVFSKMDSRDVVSWNTMIGGYGM 469
Query: 355 NGMFDECIGAYIGMKSKNVLPDGYVFPKVLRACTVAMCLETGVQVQKDVIQC-GAESNTE 179
NG + + MK P+ F +L AC+ + ++ G+Q+ +I C E
Sbjct: 470 NGCGKAALQLLLEMKQSGFQPNSATFTSLLSACSHSGLVDDGLQLFDSLINCFDFSPRME 529
Query: 178 VCNCLIDMYSKCGCIESARRVFDSM-AGRDLLSWNTMIS 65
C++D+ ++ G +E A +M D W ++S
Sbjct: 530 HFACVVDLLARAGKLEEAVDFIHNMPINPDKSIWGALLS 568
>ref|XP_009617297.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Nicotiana tomentosiformis]
Length = 637
Score = 243 bits (620), Expect = 7e-62
Identities = 119/219 (54%), Positives = 157/219 (71%), Gaps = 3/219 (1%)
Frame = -2
Query: 649 MRIWKFQRTISSLPVPNFTPL---QFNHLLQLCSNSRSLNPGKQTHKQIIVHGLDHNPFV 479
MR+W F + SS+P N P + +HLLQLCSN +++ GKQTH+QI+VHG HNPFV
Sbjct: 1 MRVWSFYKKFSSVPATNVRPFLTFEISHLLQLCSNFKAIEQGKQTHQQIVVHGQSHNPFV 60
Query: 478 TTKLILFYADCNDIETTRVLFDRLPQPNVFACTSIISFYSRNGMFDECIGAYIGMKSKNV 299
TKLI YADC++I++ R LF +L Q NVFA T+++S++SRN + +E + Y MK +
Sbjct: 61 ITKLIQLYADCDNIKSARHLFVKLSQRNVFAWTAMLSYFSRNCLIEEGVSTYKVMKLDGI 120
Query: 298 LPDGYVFPKVLRACTVAMCLETGVQVQKDVIQCGAESNTEVCNCLIDMYSKCGCIESARR 119
L DGYVFP VL+AC L TG Q+ KDV+ CG E N +V + LIDMYSKCG I+SA+R
Sbjct: 121 LLDGYVFPLVLKACAKFSSLATGEQIHKDVVVCGVEWNLQVGHSLIDMYSKCGDIQSAKR 180
Query: 118 VFDSMAGRDLLSWNTMISGYVYNGILQMAVEILGLMRLD 2
VFD M +DLLSWN +ISGYV N +L +AVE+LGLM ++
Sbjct: 181 VFDLMQEKDLLSWNLIISGYVSNELLDLAVEMLGLMSME 219
Score = 81.6 bits (200), Expect = 4e-13
Identities = 54/177 (30%), Positives = 92/177 (51%), Gaps = 7/177 (3%)
Frame = -2
Query: 520 KQIIVHGLD-HNPFVTTK-----LILFYADCNDIETTRVLFDRLPQPNVFACTSIISFYS 359
++I HG+ +PF + L+ YA C I+ R +F+ + + ++ A S+I ++
Sbjct: 312 QEIHAHGIKVKSPFAFYRTSGPALLTLYAKCGRIQDARHVFELMDKTDIVAWNSMIHGFA 371
Query: 358 RNGMFDECIGAYIGMKSKNVLPDGYVFPKVLRACTVAMC-LETGVQVQKDVIQCGAESNT 182
GM D + + K +LP G + + + +C L+ G Q+ + + T
Sbjct: 372 ELGMKDLALEYF-----KKMLPMGIKINETSISSVLPVCDLKYGKQIHAYISRSSLWDVT 426
Query: 181 EVCNCLIDMYSKCGCIESARRVFDSMAGRDLLSWNTMISGYVYNGILQMAVEILGLM 11
+ N LI MYSKCGCI +A VF +A +D++SWNT+I G +G+ Q A+ +L M
Sbjct: 427 PIWNALIYMYSKCGCIGNALSVFSHLAHKDIVSWNTIIGGLGMHGLGQDALHLLEKM 483
Score = 68.9 bits (167), Expect = 3e-09
Identities = 49/187 (26%), Positives = 86/187 (45%)
Frame = -2
Query: 583 FNHLLQLCSNSRSLNPGKQTHKQIIVHGLDHNPFVTTKLILFYADCNDIETTRVLFDRLP 404
F +L+ C+ SL G+Q HK ++V G++ N V LI Y+ C DI++ + +FD +
Sbjct: 127 FPLVLKACAKFSSLATGEQIHKDVVVCGVEWNLQVGHSLIDMYSKCGDIQSAKRVFDLMQ 186
Query: 403 QPNVFACTSIISFYSRNGMFDECIGAYIGMKSKNVLPDGYVFPKVLRACTVAMCLETGVQ 224
+ ++ + IIS Y N + D + +G+ S + C
Sbjct: 187 EKDLLSWNLIISGYVSNELLDLAV-EMLGLMS-------------MEGC----------- 221
Query: 223 VQKDVIQCGAESNTEVCNCLIDMYSKCGCIESARRVFDSMAGRDLLSWNTMISGYVYNGI 44
Q D++ N ++D Y + G + AR++F + ++SW T+ISGY G
Sbjct: 222 -QPDIV---------TLNTVMDAYCRMGRCDEARKIFILIKEPSIISWTTLISGYSRIGD 271
Query: 43 LQMAVEI 23
A++I
Sbjct: 272 QNNALDI 278
>ref|XP_009366958.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
isoform X1 [Pyrus x bretschneideri]
Length = 690
Score = 239 bits (610), Expect = 1e-60
Identities = 120/217 (55%), Positives = 154/217 (70%), Gaps = 3/217 (1%)
Frame = -2
Query: 643 IWKFQRTISSLPVPNF---TPLQFNHLLQLCSNSRSLNPGKQTHKQIIVHGLDHNPFVTT 473
+W+ +R +S L N +P Q N LQLCSNS+SLN GKQ H+ II +GL+ NPF+ T
Sbjct: 55 VWRSKRAMSILSTINSKSPSPSQLNLYLQLCSNSKSLNKGKQAHQMIIEYGLNKNPFLVT 114
Query: 472 KLILFYADCNDIETTRVLFDRLPQPNVFACTSIISFYSRNGMFDECIGAYIGMKSKNVLP 293
KL+ YADC+D+ + LFD+L PNVFA T+I+ FYSR+GM++EC+ AY M K VLP
Sbjct: 115 KLVQMYADCDDLVSAWKLFDKLLNPNVFAWTAILGFYSRHGMYEECVRAYGEMILKGVLP 174
Query: 292 DGYVFPKVLRACTVAMCLETGVQVQKDVIQCGAESNTEVCNCLIDMYSKCGCIESARRVF 113
DGYVFPKVL+AC+ ++ G V K+VI G E N +VCN LIDMYSKC + SA++VF
Sbjct: 175 DGYVFPKVLKACSQLSSVKVGFLVHKEVIIRGFELNVQVCNSLIDMYSKCKDVRSAKQVF 234
Query: 112 DSMAGRDLLSWNTMISGYVYNGILQMAVEILGLMRLD 2
D M RDLLSWN +ISGYV NG+L +AVE+ M LD
Sbjct: 235 DEMVERDLLSWNFLISGYVCNGMLGLAVELFDCMHLD 271
Score = 77.8 bits (190), Expect = 5e-12
Identities = 57/187 (30%), Positives = 91/187 (48%), Gaps = 2/187 (1%)
Frame = -2
Query: 574 LLQLCSNSRSLNPGKQTHKQIIV--HGLDHNPFVTTKLILFYADCNDIETTRVLFDRLPQ 401
+L C + SL GK+ H I G+ L++ YA+C+ I+ +F +
Sbjct: 350 VLVSCRHLGSLLNGKEIHGYGIKIGSGIAFYSSAGPALLILYANCSRIQDAINVFRLMNP 409
Query: 400 PNVFACTSIISFYSRNGMFDECIGAYIGMKSKNVLPDGYVFPKVLRACTVAMCLETGVQV 221
+V + ++I + G+ D + + M+ V D VL C L+ G Q+
Sbjct: 410 ADVVSWNAMILGFIDLGLEDLALECFRKMQRAQVKVDQTTISTVLPTCN----LKFGKQI 465
Query: 220 QKDVIQCGAESNTEVCNCLIDMYSKCGCIESARRVFDSMAGRDLLSWNTMISGYVYNGIL 41
V + + V N LI MY+ CGCIESA VF +M RDL++WN+MI G+ +G
Sbjct: 466 HAFVRKNSFDLVAPVWNALIHMYAICGCIESAYSVFSNMVHRDLVTWNSMIGGFGMHGDG 525
Query: 40 QMAVEIL 20
+ A+E+L
Sbjct: 526 RAALELL 532
Score = 68.2 bits (165), Expect = 4e-09
Identities = 45/187 (24%), Positives = 85/187 (45%)
Frame = -2
Query: 583 FNHLLQLCSNSRSLNPGKQTHKQIIVHGLDHNPFVTTKLILFYADCNDIETTRVLFDRLP 404
F +L+ CS S+ G HK++I+ G + N V LI Y+ C D+ + + +FD +
Sbjct: 179 FPKVLKACSQLSSVKVGFLVHKEVIIRGFELNVQVCNSLIDMYSKCKDVRSAKQVFDEMV 238
Query: 403 QPNVFACTSIISFYSRNGMFDECIGAYIGMKSKNVLPDGYVFPKVLRACTVAMCLETGVQ 224
+ ++ + +IS Y NGM +G+ A + C+ V
Sbjct: 239 ERDLLSWNFLISGYVCNGM--------LGL-----------------AVELFDCMHLDV- 272
Query: 223 VQKDVIQCGAESNTEVCNCLIDMYSKCGCIESARRVFDSMAGRDLLSWNTMISGYVYNGI 44
E + N ++D Y + G + A+R+F+ + +++SW T+ISG+ G
Sbjct: 273 ---------CEPDVVTLNMVMDAYCRLGHCDKAKRIFEQIKEPNIISWTTLISGFSRIGN 323
Query: 43 LQMAVEI 23
+ +++I
Sbjct: 324 HESSLKI 330
Score = 59.3 bits (142), Expect = 2e-06
Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 4/162 (2%)
Frame = -2
Query: 481 VTTKLIL-FYADCNDIETTRVLFDRLPQPNVFACTSIISFYSRNGMFDECIGAYIGMKS- 308
VT +++ Y + + +F+++ +PN+ + T++IS +SR G + + + M
Sbjct: 278 VTLNMVMDAYCRLGHCDKAKRIFEQIKEPNIISWTTLISGFSRIGNHESSLKIFRDMMDG 337
Query: 307 KNVLPDGYVFPKVLRACTVAMCLETGVQVQKDVIQCGA--ESNTEVCNCLIDMYSKCGCI 134
V PD VL +C L G ++ I+ G+ + L+ +Y+ C I
Sbjct: 338 SRVYPDLDSLSAVLVSCRHLGSLLNGKEIHGYGIKIGSGIAFYSSAGPALLILYANCSRI 397
Query: 133 ESARRVFDSMAGRDLLSWNTMISGYVYNGILQMAVEILGLMR 8
+ A VF M D++SWN MI G++ G+ +A+E M+
Sbjct: 398 QDAINVFRLMNPADVVSWNAMILGFIDLGLEDLALECFRKMQ 439
>ref|XP_009787964.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Nicotiana sylvestris]
Length = 637
Score = 238 bits (608), Expect = 2e-60
Identities = 118/219 (53%), Positives = 152/219 (69%), Gaps = 3/219 (1%)
Frame = -2
Query: 649 MRIWKFQRTISSLPVPN---FTPLQFNHLLQLCSNSRSLNPGKQTHKQIIVHGLDHNPFV 479
MR+W + SS P N F + NHLLQLCSN +++ GKQTH+QIIVHG HNPF+
Sbjct: 1 MRVWSCYKKFSSAPATNVRTFLTFEINHLLQLCSNFKAIEQGKQTHQQIIVHGHGHNPFI 60
Query: 478 TTKLILFYADCNDIETTRVLFDRLPQPNVFACTSIISFYSRNGMFDECIGAYIGMKSKNV 299
TKLI YA+C +I++ R LF L Q NVFA T+++S++SRN + +EC+ Y MK +
Sbjct: 61 ITKLIRVYAECGNIKSARYLFVELSQRNVFAWTAMLSYFSRNCLIEECVSTYREMKLDGI 120
Query: 298 LPDGYVFPKVLRACTVAMCLETGVQVQKDVIQCGAESNTEVCNCLIDMYSKCGCIESARR 119
L DGYVFP VL+ C L TG QV KDV+ CGAE N +V + LIDMYSKCG I+SA+R
Sbjct: 121 LLDGYVFPLVLKVCAKFSSLATGEQVHKDVVVCGAEWNLQVGHSLIDMYSKCGDIQSAKR 180
Query: 118 VFDSMAGRDLLSWNTMISGYVYNGILQMAVEILGLMRLD 2
VFD M +DLLSWN +ISGYV N + +AV + GLMR++
Sbjct: 181 VFDLMQEKDLLSWNLIISGYVSNELPDLAVGMFGLMRME 219
Score = 73.6 bits (179), Expect = 1e-10
Identities = 49/187 (26%), Positives = 84/187 (44%)
Frame = -2
Query: 583 FNHLLQLCSNSRSLNPGKQTHKQIIVHGLDHNPFVTTKLILFYADCNDIETTRVLFDRLP 404
F +L++C+ SL G+Q HK ++V G + N V LI Y+ C DI++ + +FD +
Sbjct: 127 FPLVLKVCAKFSSLATGEQVHKDVVVCGAEWNLQVGHSLIDMYSKCGDIQSAKRVFDLMQ 186
Query: 403 QPNVFACTSIISFYSRNGMFDECIGAYIGMKSKNVLPDGYVFPKVLRACTVAMCLETGVQ 224
+ ++ + IIS Y N + D +G + M+ + PD F
Sbjct: 187 EKDLLSWNLIISGYVSNELPDLAVGMFGLMRMEGCQPDIVTF------------------ 228
Query: 223 VQKDVIQCGAESNTEVCNCLIDMYSKCGCIESARRVFDSMAGRDLLSWNTMISGYVYNGI 44
N ++D Y + G + AR++F + ++SW T+ISGY G
Sbjct: 229 -----------------NTIMDAYCRMGRCDEARKIFMLIKDPSIISWTTLISGYSRIGE 271
Query: 43 LQMAVEI 23
A++I
Sbjct: 272 HNHALDI 278
Score = 72.8 bits (177), Expect = 2e-10
Identities = 47/154 (30%), Positives = 79/154 (51%), Gaps = 1/154 (0%)
Frame = -2
Query: 469 LILFYADCNDIETTRVLFDRLPQPNVFACTSIISFYSRNGMFDECIGAYIGMKSKNVLPD 290
L+ Y C I+ R +F+ + + +V A S+I ++ GM + + KN++P
Sbjct: 335 LLTLYTKCGRIQDARHVFELMDKTDVVAWNSMIHGFAELGMKGLALEYF-----KNMIPM 389
Query: 289 GY-VFPKVLRACTVAMCLETGVQVQKDVIQCGAESNTEVCNCLIDMYSKCGCIESARRVF 113
G + L + L+ G Q+ +++ T + N LI MYSK GCI +A VF
Sbjct: 390 GIKINGTTLSSVLPVFDLKYGKQIHAYILRSSLWDVTPIWNALIYMYSKYGCIGNALSVF 449
Query: 112 DSMAGRDLLSWNTMISGYVYNGILQMAVEILGLM 11
+A +D++SWNT+I G +G+ Q A+ +L M
Sbjct: 450 SHLAHKDIVSWNTIIGGLGMHGLGQDALHLLEKM 483
>ref|XP_008340659.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Malus domestica]
Length = 817
Score = 237 bits (605), Expect = 4e-60
Identities = 119/217 (54%), Positives = 151/217 (69%), Gaps = 3/217 (1%)
Frame = -2
Query: 643 IWKFQRTISSLPVPNF---TPLQFNHLLQLCSNSRSLNPGKQTHKQIIVHGLDHNPFVTT 473
+W +R +S L N +P Q N LQLC NS+SLN GKQ H+ II +G D NPF+ T
Sbjct: 55 VWCSKRAMSILSTINSKSPSPSQLNLYLQLCCNSKSLNKGKQAHQMIIEYGFDENPFLVT 114
Query: 472 KLILFYADCNDIETTRVLFDRLPQPNVFACTSIISFYSRNGMFDECIGAYIGMKSKNVLP 293
KL+ YADC+D+ + LFD+L PNVFA T+I+ FYSR+GM+++C+ AY M K VLP
Sbjct: 115 KLVQMYADCDDLVSAWXLFDKLLNPNVFAWTAILGFYSRHGMYEKCVRAYGEMILKGVLP 174
Query: 292 DGYVFPKVLRACTVAMCLETGVQVQKDVIQCGAESNTEVCNCLIDMYSKCGCIESARRVF 113
DGYVFPKVL+AC+ ++ G V KDVI G E N +VCN LIDMYSKC + SA++VF
Sbjct: 175 DGYVFPKVLKACSQLSSVKVGFLVHKDVIIRGFELNVQVCNSLIDMYSKCKDVRSAKQVF 234
Query: 112 DSMAGRDLLSWNTMISGYVYNGILQMAVEILGLMRLD 2
D M RD+LSWN MISGYV NG+L +AVE+ M LD
Sbjct: 235 DEMVERDJLSWNFMISGYVCNGMLGLAVELFDCMHLD 271
Score = 81.6 bits (200), Expect = 4e-13
Identities = 57/183 (31%), Positives = 90/183 (49%), Gaps = 2/183 (1%)
Frame = -2
Query: 562 CSNSRSLNPGKQTHKQIIVHG--LDHNPFVTTKLILFYADCNDIETTRVLFDRLPQPNVF 389
C + SL GK+ H I G + L++ YA+C+ I+ +F + +V
Sbjct: 354 CRHLGSLLNGKEIHGYGIKIGSXIAFYSSAGPALLILYANCSRIQDAINVFRLMNPADVV 413
Query: 388 ACTSIISFYSRNGMFDECIGAYIGMKSKNVLPDGYVFPKVLRACTVAMCLETGVQVQKDV 209
+ ++I + G+ D + + M+ V D VL C L+ G Q+ V
Sbjct: 414 SWNAMILGFIDLGLEDLALECFRKMQRAQVKADQTTISTVLPTCN----LKFGKQIHAFV 469
Query: 208 IQCGAESNTEVCNCLIDMYSKCGCIESARRVFDSMAGRDLLSWNTMISGYVYNGILQMAV 29
+ + V N LI MY+KCGCIESA VF +M RDL++WN+MI G+ +G + A+
Sbjct: 470 RKSSFDLVAPVWNALIHMYAKCGCIESAYSVFSNMVNRDLVTWNSMIGGFGMHGDGRAAL 529
Query: 28 EIL 20
E+L
Sbjct: 530 ELL 532
Score = 67.8 bits (164), Expect = 6e-09
Identities = 45/187 (24%), Positives = 84/187 (44%)
Frame = -2
Query: 583 FNHLLQLCSNSRSLNPGKQTHKQIIVHGLDHNPFVTTKLILFYADCNDIETTRVLFDRLP 404
F +L+ CS S+ G HK +I+ G + N V LI Y+ C D+ + + +FD +
Sbjct: 179 FPKVLKACSQLSSVKVGFLVHKDVIIRGFELNVQVCNSLIDMYSKCKDVRSAKQVFDEMV 238
Query: 403 QPNVFACTSIISFYSRNGMFDECIGAYIGMKSKNVLPDGYVFPKVLRACTVAMCLETGVQ 224
+ ++ + +IS Y NGM +G+ A + C+ V
Sbjct: 239 ERDJLSWNFMISGYVCNGM--------LGL-----------------AVELFDCMHLDV- 272
Query: 223 VQKDVIQCGAESNTEVCNCLIDMYSKCGCIESARRVFDSMAGRDLLSWNTMISGYVYNGI 44
E + N ++D Y + G + A+R+F+ + +++SW T+ISG+ G
Sbjct: 273 ---------CEPDVVTLNTVMDAYCRLGHCDEAKRIFEQIKDPNIISWTTLISGFSRIGN 323
Query: 43 LQMAVEI 23
+ +++I
Sbjct: 324 HESSLKI 330
Score = 57.8 bits (138), Expect = 6e-06
Identities = 39/153 (25%), Positives = 72/153 (47%), Gaps = 3/153 (1%)
Frame = -2
Query: 457 YADCNDIETTRVLFDRLPQPNVFACTSIISFYSRNGMFDECIGAYIGMKS-KNVLPDGYV 281
Y + + +F+++ PN+ + T++IS +SR G + + + M V PD
Sbjct: 287 YCRLGHCDEAKRIFEQIKDPNIISWTTLISGFSRIGNHESSLKIFRDMMDGSRVYPDLDS 346
Query: 280 FPKVLRACTVAMCLETGVQVQKDVIQCGAESN--TEVCNCLIDMYSKCGCIESARRVFDS 107
V+ +C L G ++ I+ G+ + L+ +Y+ C I+ A VF
Sbjct: 347 LSAVJVSCRHLGSLLNGKEIHGYGIKIGSXIAFYSSAGPALLILYANCSRIQDAINVFRL 406
Query: 106 MAGRDLLSWNTMISGYVYNGILQMAVEILGLMR 8
M D++SWN MI G++ G+ +A+E M+
Sbjct: 407 MNPADVVSWNAMILGFIDLGLEDLALECFRKMQ 439
>ref|XP_008344308.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like isoform X1 [Malus domestica]
Length = 690
Score = 236 bits (603), Expect = 7e-60
Identities = 119/217 (54%), Positives = 151/217 (69%), Gaps = 3/217 (1%)
Frame = -2
Query: 643 IWKFQRTISSLPVPNF---TPLQFNHLLQLCSNSRSLNPGKQTHKQIIVHGLDHNPFVTT 473
+W +R +S L N +P Q N LQLC NS+SLN GKQ H+ II +G D NPF+ T
Sbjct: 55 VWCSKRAMSILSTINSKSPSPSQLNLYLQLCCNSKSLNKGKQAHQMIIEYGFDXNPFLVT 114
Query: 472 KLILFYADCNDIETTRVLFDRLPQPNVFACTSIISFYSRNGMFDECIGAYIGMKSKNVLP 293
KL+ YADC+D+ + LFD+L PNVFA T+I+ FYSR+GM+++C+ AY M K VLP
Sbjct: 115 KLVQMYADCDDLVSAWKLFDKLLNPNVFAWTAILGFYSRHGMYEKCVRAYGEMILKGVLP 174
Query: 292 DGYVFPKVLRACTVAMCLETGVQVQKDVIQCGAESNTEVCNCLIDMYSKCGCIESARRVF 113
DGYVFPKVL+AC+ ++ G V KDVI G E N +VCN LIDMYSKC + SA++VF
Sbjct: 175 DGYVFPKVLKACSQLSSVKVGFLVHKDVIIRGFELNVQVCNSLIDMYSKCKDVRSAKQVF 234
Query: 112 DSMAGRDLLSWNTMISGYVYNGILQMAVEILGLMRLD 2
D M RD+LSWN MISGYV NG+L +AVE+ M LD
Sbjct: 235 DEMVERDJLSWNFMISGYVCNGMLGLAVELFDCMHLD 271
Score = 77.0 bits (188), Expect = 9e-12
Identities = 53/174 (30%), Positives = 83/174 (47%), Gaps = 2/174 (1%)
Frame = -2
Query: 562 CSNSRSLNPGKQTHKQIIVHG--LDHNPFVTTKLILFYADCNDIETTRVLFDRLPQPNVF 389
C + SL GK+ H I G + L++ YA+C+ I+ +F + +V
Sbjct: 354 CRHLGSLLNGKEIHGYGIKIGSXIAFYSSAGPALLILYANCSRIQDAINVFRLMNPADVV 413
Query: 388 ACTSIISFYSRNGMFDECIGAYIGMKSKNVLPDGYVFPKVLRACTVAMCLETGVQVQKDV 209
+ ++I + G+ D + + M+ V D L C L+ G Q+ V
Sbjct: 414 SWNAMILGFIDLGLXDLALECFRKMQRAQVKADQTTISTXLPTCN----LKFGKQIHAFV 469
Query: 208 IQCGAESNTEVCNCLIDMYSKCGCIESARRVFDSMAGRDLLSWNTMISGYVYNG 47
+ + V N LI MY+KCGCIESA VF +M RDL++WN+MI G+ +G
Sbjct: 470 RKSSFDLVAPVWNALIHMYAKCGCIESAYSVFSNMVNRDLVTWNSMIGGFGMHG 523
Score = 67.8 bits (164), Expect = 6e-09
Identities = 45/187 (24%), Positives = 84/187 (44%)
Frame = -2
Query: 583 FNHLLQLCSNSRSLNPGKQTHKQIIVHGLDHNPFVTTKLILFYADCNDIETTRVLFDRLP 404
F +L+ CS S+ G HK +I+ G + N V LI Y+ C D+ + + +FD +
Sbjct: 179 FPKVLKACSQLSSVKVGFLVHKDVIIRGFELNVQVCNSLIDMYSKCKDVRSAKQVFDEMV 238
Query: 403 QPNVFACTSIISFYSRNGMFDECIGAYIGMKSKNVLPDGYVFPKVLRACTVAMCLETGVQ 224
+ ++ + +IS Y NGM +G+ A + C+ V
Sbjct: 239 ERDJLSWNFMISGYVCNGM--------LGL-----------------AVELFDCMHLDV- 272
Query: 223 VQKDVIQCGAESNTEVCNCLIDMYSKCGCIESARRVFDSMAGRDLLSWNTMISGYVYNGI 44
E + N ++D Y + G + A+R+F+ + +++SW T+ISG+ G
Sbjct: 273 ---------CEPDVVTLNTVMDAYCRLGHCDEAKRIFEQIKDPNIISWTTLISGFSRIGN 323
Query: 43 LQMAVEI 23
+ +++I
Sbjct: 324 HESSLKI 330
Score = 58.5 bits (140), Expect = 3e-06
Identities = 39/153 (25%), Positives = 72/153 (47%), Gaps = 3/153 (1%)
Frame = -2
Query: 457 YADCNDIETTRVLFDRLPQPNVFACTSIISFYSRNGMFDECIGAYIGMKS-KNVLPDGYV 281
Y + + +F+++ PN+ + T++IS +SR G + + + M V PD
Sbjct: 287 YCRLGHCDEAKRIFEQIKDPNIISWTTLISGFSRIGNHESSLKIFRDMMDGSRVYPDLDS 346
Query: 280 FPKVLRACTVAMCLETGVQVQKDVIQCGAESN--TEVCNCLIDMYSKCGCIESARRVFDS 107
V+ +C L G ++ I+ G+ + L+ +Y+ C I+ A VF
Sbjct: 347 LSAVJVSCRHLGSLLNGKEIHGYGIKIGSXIAFYSSAGPALLILYANCSRIQDAINVFRL 406
Query: 106 MAGRDLLSWNTMISGYVYNGILQMAVEILGLMR 8
M D++SWN MI G++ G+ +A+E M+
Sbjct: 407 MNPADVVSWNAMILGFIDLGLXDLALECFRKMQ 439
>ref|XP_002523554.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223537116|gb|EEF38749.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 611
Score = 232 bits (592), Expect = 1e-58
Identities = 112/191 (58%), Positives = 140/191 (73%)
Frame = -2
Query: 574 LLQLCSNSRSLNPGKQTHKQIIVHGLDHNPFVTTKLILFYADCNDIETTRVLFDRLPQPN 395
+LQLCSN +SL+ GKQ H+QI V G +PF+ TKLI YADC+ + + + LFD++PQPN
Sbjct: 1 MLQLCSNLKSLHAGKQIHQQITVSGWGKDPFMLTKLIQMYADCDHLFSAQRLFDKMPQPN 60
Query: 394 VFACTSIISFYSRNGMFDECIGAYIGMKSKNVLPDGYVFPKVLRACTVAMCLETGVQVQK 215
V+A T+I FY R+GM+D+C+ Y MK +VLPD YVFPKVLRACT + E G+ + K
Sbjct: 61 VYAWTAIFGFYLRHGMYDKCVQNYGFMKYSDVLPDNYVFPKVLRACTQLLWFEGGIWIHK 120
Query: 214 DVIQCGAESNTEVCNCLIDMYSKCGCIESARRVFDSMAGRDLLSWNTMISGYVYNGILQM 35
DVI CG ESN +VCN LIDMY KCG SAR VF+ M RDL SWN+MISGYV NG+ +
Sbjct: 121 DVIVCGCESNLQVCNSLIDMYVKCGNARSARLVFEEMEERDLFSWNSMISGYVSNGLADL 180
Query: 34 AVEILGLMRLD 2
AVE+L MRLD
Sbjct: 181 AVELLNCMRLD 191
Score = 70.5 bits (171), Expect = 9e-10
Identities = 43/155 (27%), Positives = 75/155 (48%)
Frame = -2
Query: 469 LILFYADCNDIETTRVLFDRLPQPNVFACTSIISFYSRNGMFDECIGAYIGMKSKNVLPD 290
L+ YA C I+ +F+ + + ++ ++I + + + I + M+ ++ D
Sbjct: 307 LLTMYAKCGRIQDAINVFELMDKSDIVTWNAMILGFVELDLGKQAIECFREMQRMDIKND 366
Query: 289 GYVFPKVLRACTVAMCLETGVQVQKDVIQCGAESNTEVCNCLIDMYSKCGCIESARRVFD 110
+L C + V+K + S V N +I MY KCGC+ SA +F
Sbjct: 367 QTTISTILPVCDLQYGNPIHAYVRKSIT---LSSVVTVWNAVIHMYCKCGCVRSAYTIFC 423
Query: 109 SMAGRDLLSWNTMISGYVYNGILQMAVEILGLMRL 5
SM +D++SWNTMI G+ +G Q A+++L M L
Sbjct: 424 SMPNKDVVSWNTMIGGFGMHGHGQAALKLLKEMIL 458
Score = 62.0 bits (149), Expect = 3e-07
Identities = 42/136 (30%), Positives = 69/136 (50%), Gaps = 7/136 (5%)
Frame = -2
Query: 412 RLPQPNVFACTSIISFYSRNGMFDECIGAYIGMKSKNVL-PDGYVFPKVLRACTVAMCLE 236
++ QPN+ + T++IS YS+ G D + + M + V+ PD VL +C L
Sbjct: 222 QIEQPNIISWTTLISSYSKIGEHDMSLRVFQDMIIREVVSPDLDCLCSVLVSCRHIGALR 281
Query: 235 TGVQVQKDVIQCGAESNTEVC------NCLIDMYSKCGCIESARRVFDSMAGRDLLSWNT 74
+G K++ G + T L+ MY+KCG I+ A VF+ M D+++WN
Sbjct: 282 SG----KEIHGYGTKMETNTVFYSSAGAALLTMYAKCGRIQDAINVFELMDKSDIVTWNA 337
Query: 73 MISGYVYNGILQMAVE 26
MI G+V + + A+E
Sbjct: 338 MILGFVELDLGKQAIE 353
>ref|XP_004233437.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Solanum lycopersicum]
Length = 638
Score = 229 bits (584), Expect = 1e-57
Identities = 114/219 (52%), Positives = 153/219 (69%), Gaps = 3/219 (1%)
Frame = -2
Query: 649 MRIWKFQRTISSLPVPNFTPL---QFNHLLQLCSNSRSLNPGKQTHKQIIVHGLDHNPFV 479
M++W F + SS+P TP + N+LLQLC+NS S++ KQTH+Q+IVHG HNPF+
Sbjct: 1 MKVWSFYKKNSSVPTFTGTPFLTFEINNLLQLCTNSNSVDQAKQTHQQVIVHGQSHNPFI 60
Query: 478 TTKLILFYADCNDIETTRVLFDRLPQPNVFACTSIISFYSRNGMFDECIGAYIGMKSKNV 299
TKLI Y + +DI+ + LF +L Q NVFA T++IS++SRN + EC+ Y MK +++
Sbjct: 61 ITKLIQIYTERDDIKYAQNLFVKLSQRNVFAWTAMISYFSRNRLIKECVNTYKEMKREDI 120
Query: 298 LPDGYVFPKVLRACTVAMCLETGVQVQKDVIQCGAESNTEVCNCLIDMYSKCGCIESARR 119
LPDGY+FP VLR C L GVQV +DVI CG E N +V + LIDMYS+C I SA+R
Sbjct: 121 LPDGYLFPLVLRVCAKFSSLGIGVQVHRDVIVCGVEWNLQVSHSLIDMYSRCCDIRSAKR 180
Query: 118 VFDSMAGRDLLSWNTMISGYVYNGILQMAVEILGLMRLD 2
VFD M +DLLSWN +ISGYV N +L +AVE+LG M ++
Sbjct: 181 VFDLMQEKDLLSWNLIISGYVCNELLDLAVEMLGHMSME 219
Score = 76.3 bits (186), Expect = 2e-11
Identities = 46/154 (29%), Positives = 81/154 (52%), Gaps = 1/154 (0%)
Frame = -2
Query: 469 LILFYADCNDIETTRVLFDRLPQPNVFACTSIISFYSRNGMFDECIGAYIGMKSKNVLPD 290
L+ YA C I+ R +F+ + + +V + S+I ++ GM D + + K +L
Sbjct: 335 LLTLYAKCGRIQDARHVFELMDRTDVVSWNSMIHGFAELGMKDLAVEHF-----KEMLTI 389
Query: 289 GYVFPKVLRACTVAMC-LETGVQVQKDVIQCGAESNTEVCNCLIDMYSKCGCIESARRVF 113
G + + + +C ++ G Q+ + + T + N LI MYSKCGCI +A VF
Sbjct: 390 GIKITETTLSIVLPVCDVKYGKQIHAYISRSSFLDATPIWNALIHMYSKCGCIGNAICVF 449
Query: 112 DSMAGRDLLSWNTMISGYVYNGILQMAVEILGLM 11
+A +D++SWNT+I G +G+ Q A+ ++ M
Sbjct: 450 SHLAHKDIVSWNTIIGGLGVHGLGQDALHLMEKM 483
Score = 65.1 bits (157), Expect = 4e-08
Identities = 45/179 (25%), Positives = 76/179 (42%)
Frame = -2
Query: 583 FNHLLQLCSNSRSLNPGKQTHKQIIVHGLDHNPFVTTKLILFYADCNDIETTRVLFDRLP 404
F +L++C+ SL G Q H+ +IV G++ N V+ LI Y+ C DI + + +FD +
Sbjct: 127 FPLVLRVCAKFSSLGIGVQVHRDVIVCGVEWNLQVSHSLIDMYSRCCDIRSAKRVFDLMQ 186
Query: 403 QPNVFACTSIISFYSRNGMFDECIGAYIGMKSKNVLPDGYVFPKVLRACTVAMCLETGVQ 224
+ ++ + IIS Y N + D + M + PD
Sbjct: 187 EKDLLSWNLIISGYVCNELLDLAVEMLGHMSMEGCQPD---------------------- 224
Query: 223 VQKDVIQCGAESNTEVCNCLIDMYSKCGCIESARRVFDSMAGRDLLSWNTMISGYVYNG 47
N ++D Y + G + AR++F + ++SW T+ISGY G
Sbjct: 225 -------------IVTLNTVMDAYCRMGQCDEARKIFALIKEPSIISWTTLISGYSRTG 270
>ref|XP_006360219.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Solanum tuberosum]
Length = 638
Score = 227 bits (578), Expect = 6e-57
Identities = 113/213 (53%), Positives = 149/213 (69%), Gaps = 3/213 (1%)
Frame = -2
Query: 649 MRIWKFQRTISSLPVPNFTPL---QFNHLLQLCSNSRSLNPGKQTHKQIIVHGLDHNPFV 479
M++W F + SS+P TP + N+LLQLCSNS+S++ GKQTH+QIIVHG HNPF+
Sbjct: 1 MKVWNFYKNFSSVPAFTGTPFLTFEINNLLQLCSNSKSVDQGKQTHQQIIVHGQSHNPFI 60
Query: 478 TTKLILFYADCNDIETTRVLFDRLPQPNVFACTSIISFYSRNGMFDECIGAYIGMKSKNV 299
TKLI Y + +DI + + LF +L Q NV+A T++IS++SRN + EC+ Y MK N+
Sbjct: 61 ITKLIQVYTERDDIISAQNLFVKLSQRNVYAWTAMISYFSRNRLIKECVNTYKEMKLDNI 120
Query: 298 LPDGYVFPKVLRACTVAMCLETGVQVQKDVIQCGAESNTEVCNCLIDMYSKCGCIESARR 119
LPDGYVFP VLR C G+QV +D+I CG E N +V + LIDMYSKC I SA++
Sbjct: 121 LPDGYVFPLVLRVCAKFSSSGIGLQVHRDIIVCGVEWNLQVSHSLIDMYSKCCDIRSAKQ 180
Query: 118 VFDSMAGRDLLSWNTMISGYVYNGILQMAVEIL 20
VFD M +DLLSWN +ISGYV N +L +AVE+L
Sbjct: 181 VFDLMQEKDLLSWNLIISGYVCNELLDLAVEML 213
Score = 79.7 bits (195), Expect = 1e-12
Identities = 52/177 (29%), Positives = 92/177 (51%), Gaps = 7/177 (3%)
Frame = -2
Query: 520 KQIIVHGLD-HNPFVTTK-----LILFYADCNDIETTRVLFDRLPQPNVFACTSIISFYS 359
++I HG+ +PF + L+ YA C I+ R +F+ + + +V + S+I ++
Sbjct: 312 QEIHAHGIKLESPFAFHRSSGPALLTLYAKCGRIQDARHVFELMDRTDVVSWNSMIHGFA 371
Query: 358 RNGMFDECIGAYIGMKSKNVLPDGYVFPKVLRACTVAMC-LETGVQVQKDVIQCGAESNT 182
GM D + + K +L G + + + +C ++ G Q+ +++ T
Sbjct: 372 ELGMKDLSVEYF-----KEMLTIGIKITETTLSIVLPVCDIKYGKQIHAYILRSSFWDVT 426
Query: 181 EVCNCLIDMYSKCGCIESARRVFDSMAGRDLLSWNTMISGYVYNGILQMAVEILGLM 11
+ N LI MYSKCGCI +A VF +A +D++SWNT+I G +G+ Q A+ +L M
Sbjct: 427 PIWNALIHMYSKCGCIGNALCVFSHLAHKDIVSWNTIIGGLGMHGLGQDALHLLEKM 483
Score = 65.1 bits (157), Expect = 4e-08
Identities = 46/191 (24%), Positives = 84/191 (43%), Gaps = 2/191 (1%)
Frame = -2
Query: 625 TISSLPVPNFTP--LQFNHLLQLCSNSRSLNPGKQTHKQIIVHGLDHNPFVTTKLILFYA 452
T + + N P F +L++C+ S G Q H+ IIV G++ N V+ LI Y+
Sbjct: 111 TYKEMKLDNILPDGYVFPLVLRVCAKFSSSGIGLQVHRDIIVCGVEWNLQVSHSLIDMYS 170
Query: 451 DCNDIETTRVLFDRLPQPNVFACTSIISFYSRNGMFDECIGAYIGMKSKNVLPDGYVFPK 272
C DI + + +FD + + ++ + IIS Y N +
Sbjct: 171 KCCDIRSAKQVFDLMQEKDLLSWNLIISGYVCNEL------------------------- 205
Query: 271 VLRACTVAMCLETGVQVQKDVIQCGAESNTEVCNCLIDMYSKCGCIESARRVFDSMAGRD 92
L+ V++ + + + G + + N ++D Y + G + AR++F +
Sbjct: 206 ----------LDLAVEMLRHMSKEGCQPDIVTLNTVMDAYCRMGQCDEARKIFALIKEPS 255
Query: 91 LLSWNTMISGY 59
++SW T+ISGY
Sbjct: 256 IISWTTLISGY 266
>ref|XP_010043756.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Eucalyptus grandis]
Length = 640
Score = 209 bits (531), Expect = 2e-51
Identities = 105/197 (53%), Positives = 134/197 (68%)
Frame = -2
Query: 598 FTPLQFNHLLQLCSNSRSLNPGKQTHKQIIVHGLDHNPFVTTKLILFYADCNDIETTRVL 419
F+PL+ LLQLC ++ SL KQ H++I+ HGL + FV TKL YAD +D + L
Sbjct: 7 FSPLEATALLQLCRDAGSLAQCKQVHQRIVQHGLQADQFVATKLTQSYADLDDAASADRL 66
Query: 418 FDRLPQPNVFACTSIISFYSRNGMFDECIGAYIGMKSKNVLPDGYVFPKVLRACTVAMCL 239
F RL +PNVFA T++++ SR+G F C+GAY MK V PDGYVFP VLRAC +
Sbjct: 67 FRRLLRPNVFAWTAVLAHRSRSGAFGACVGAYRDMKRAGVAPDGYVFPSVLRACAQSGRA 126
Query: 238 ETGVQVQKDVIQCGAESNTEVCNCLIDMYSKCGCIESARRVFDSMAGRDLLSWNTMISGY 59
E G V +DVI E+N +VCN LIDMY KCG +ESARRVFD M RDLLSWN+++SGY
Sbjct: 127 EVGAVVHRDVIARACEANVQVCNALIDMYGKCGHVESARRVFDEMGDRDLLSWNSVMSGY 186
Query: 58 VYNGILQMAVEILGLMR 8
++NG+ AVE+L MR
Sbjct: 187 IWNGLHGSAVELLPAMR 203
Score = 74.3 bits (181), Expect = 6e-11
Identities = 57/227 (25%), Positives = 105/227 (46%), Gaps = 10/227 (4%)
Frame = -2
Query: 655 WSM----RIWKFQRTISSLPVPNFTPLQFNHLLQLCSNSRSLNPGKQTHKQIIVHGL--- 497
W M ++W RT+SS L C + +L GK+ H HG+
Sbjct: 266 WDMVNAGKVWPDIRTLSSA-------------LTSCRHLGALVIGKEIH----AHGIKTE 308
Query: 496 DHNPFVTTK---LILFYADCNDIETTRVLFDRLPQPNVFACTSIISFYSRNGMFDECIGA 326
+ F ++ L+ YA C I+ +F+++ + + ++I + G + I
Sbjct: 309 SRSSFYSSAGAALLTMYAKCGKIQEATRVFEQMDKSDFVTWNAMILGFVDLGYGNSAIVC 368
Query: 325 YIGMKSKNVLPDGYVFPKVLRACTVAMCLETGVQVQKDVIQCGAESNTEVCNCLIDMYSK 146
+I M + + D +L C + + + +QK+ + S N LI MYSK
Sbjct: 369 FIEMLNLGIAFDQITISTLLPVCDLTLGKQIHAYIQKN----SSLSGVITWNALIHMYSK 424
Query: 145 CGCIESARRVFDSMAGRDLLSWNTMISGYVYNGILQMAVEILGLMRL 5
GCI+SA +F +M +D++SWN++I G+ +G + A+++L M++
Sbjct: 425 QGCIQSALSIFSNMETKDIISWNSIIGGFGMHGHGEAALQLLQEMKV 471
Score = 64.3 bits (155), Expect = 6e-08
Identities = 42/187 (22%), Positives = 76/187 (40%)
Frame = -2
Query: 583 FNHLLQLCSNSRSLNPGKQTHKQIIVHGLDHNPFVTTKLILFYADCNDIETTRVLFDRLP 404
F +L+ C+ S G H+ +I + N V LI Y C +E+ R +FD +
Sbjct: 113 FPSVLRACAQSGRAEVGAVVHRDVIARACEANVQVCNALIDMYGKCGHVESARRVFDEMG 172
Query: 403 QPNVFACTSIISFYSRNGMFDECIGAYIGMKSKNVLPDGYVFPKVLRACTVAMCLETGVQ 224
++ + S++S Y NG+ + M+S+ + PD +
Sbjct: 173 DRDLLSWNSVMSGYIWNGLHGSAVELLPAMRSEGLDPDIVTW------------------ 214
Query: 223 VQKDVIQCGAESNTEVCNCLIDMYSKCGCIESARRVFDSMAGRDLLSWNTMISGYVYNGI 44
N ++D Y + G + AR V + + + +SW T+ISGY G
Sbjct: 215 -----------------NMVMDAYCQMGLFDEARNVLEQIEEPNTISWTTLISGYCRIGK 257
Query: 43 LQMAVEI 23
+ ++E+
Sbjct: 258 HKTSLEV 264
>ref|XP_003551036.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Glycine max]
Length = 619
Score = 200 bits (509), Expect = 6e-49
Identities = 99/194 (51%), Positives = 133/194 (68%)
Frame = -2
Query: 583 FNHLLQLCSNSRSLNPGKQTHKQIIVHGLDHNPFVTTKLILFYADCNDIETTRVLFDRLP 404
FN LLQ C ++LN KQ H +I++ G HN F TKLI YAD ND+ + L ++
Sbjct: 8 FNSLLQAC---KTLNQAKQLHHRILLTGSHHNHFFVTKLIQIYADSNDLRSAVTLLHQIS 64
Query: 403 QPNVFACTSIISFYSRNGMFDECIGAYIGMKSKNVLPDGYVFPKVLRACTVAMCLETGVQ 224
PNVFA TSI+SF+SR+G+ +CI Y ++ V+PDGYVFPKVL+AC +G
Sbjct: 65 HPNVFAFTSILSFHSRHGLGHQCIQTYAELRRNGVVPDGYVFPKVLKACAQLSRFGSGRG 124
Query: 223 VQKDVIQCGAESNTEVCNCLIDMYSKCGCIESARRVFDSMAGRDLLSWNTMISGYVYNGI 44
V KDV+ G ESN +V N ++DMYSKCG + SAR+VFD M+ RD+ SWN+M+SGYV+NG+
Sbjct: 125 VHKDVVVFGEESNLQVRNSVLDMYSKCGDVGSARQVFDEMSERDVFSWNSMMSGYVWNGL 184
Query: 43 LQMAVEILGLMRLD 2
AVE+LG+M+ D
Sbjct: 185 PHKAVEVLGVMKKD 198
Score = 75.1 bits (183), Expect = 4e-11
Identities = 47/150 (31%), Positives = 74/150 (49%)
Frame = -2
Query: 469 LILFYADCNDIETTRVLFDRLPQPNVFACTSIISFYSRNGMFDECIGAYIGMKSKNVLPD 290
L++ YA ++ +F R+ + +V ++I G+ D + + M+ + V D
Sbjct: 316 LLMLYAGWGRLDCADNVFWRMDKSDVVTWNAMIFGLVDVGLVDLALDCFREMQGRGVGID 375
Query: 289 GYVFPKVLRACTVAMCLETGVQVQKDVIQCGAESNTEVCNCLIDMYSKCGCIESARRVFD 110
G +L C L G ++ V +C V N LI MYS GCI A VF
Sbjct: 376 GRTISSILPVCD----LRCGKEIHAYVRKCNFSGVIPVYNALIHMYSIRGCIAYAYSVFS 431
Query: 109 SMAGRDLLSWNTMISGYVYNGILQMAVEIL 20
+M RDL+SWNT+I G+ +G+ Q A+E+L
Sbjct: 432 TMVARDLVSWNTIIGGFGTHGLGQTALELL 461
>ref|XP_007155935.1| hypothetical protein PHAVU_003G244800g [Phaseolus vulgaris]
gi|561029289|gb|ESW27929.1| hypothetical protein
PHAVU_003G244800g [Phaseolus vulgaris]
Length = 619
Score = 193 bits (490), Expect = 9e-47
Identities = 100/192 (52%), Positives = 125/192 (65%)
Frame = -2
Query: 583 FNHLLQLCSNSRSLNPGKQTHKQIIVHGLDHNPFVTTKLILFYADCNDIETTRVLFDRLP 404
FN LL C ++LN KQ H I+ NPF TKLI YADCND+ + L +L
Sbjct: 8 FNSLLGAC---KTLNQAKQLHNCILQTASHRNPFFVTKLIQIYADCNDLRSALTLLHQLS 64
Query: 403 QPNVFACTSIISFYSRNGMFDECIGAYIGMKSKNVLPDGYVFPKVLRACTVAMCLETGVQ 224
QPNVFA TSI+SF+S++G CI Y ++ V+PDGYVFPKVL+AC L TG
Sbjct: 65 QPNVFAFTSILSFHSKHGHPHHCIQTYAKLRQNGVVPDGYVFPKVLKACAQLSRLGTGTV 124
Query: 223 VQKDVIQCGAESNTEVCNCLIDMYSKCGCIESARRVFDSMAGRDLLSWNTMISGYVYNGI 44
V KDVI GAESN +V N ++DMYSKCG + SA +VFD M RD+ SWN+M+SGYV NG
Sbjct: 125 VYKDVIVFGAESNLQVRNSVLDMYSKCGDVWSATQVFDEMPERDVFSWNSMMSGYVCNGF 184
Query: 43 LQMAVEILGLMR 8
Q AVE+ +M+
Sbjct: 185 PQRAVEVFRVMK 196
Score = 76.3 bits (186), Expect = 2e-11
Identities = 46/150 (30%), Positives = 77/150 (51%)
Frame = -2
Query: 469 LILFYADCNDIETTRVLFDRLPQPNVFACTSIISFYSRNGMFDECIGAYIGMKSKNVLPD 290
L+ YA C ++ V+F R+ + +V ++I G+ D + + M+ + + D
Sbjct: 316 LLALYAGCGRLDRADVVFRRMDKSDVVTWNAMIFGLVDVGLGDLALECFREMQERGLRID 375
Query: 289 GYVFPKVLRACTVAMCLETGVQVQKDVIQCGAESNTEVCNCLIDMYSKCGCIESARRVFD 110
G +L C L G ++ V +C S V N L+ MYS GCI A VF
Sbjct: 376 GTTVATILPVCD----LRCGKEMHAYVRKCCLSSVIPVNNALVHMYSIRGCIAYACAVFS 431
Query: 109 SMAGRDLLSWNTMISGYVYNGILQMAVEIL 20
+M +DL+SWNT+I G+ +G+ Q+A+++L
Sbjct: 432 TMVAKDLVSWNTIIGGFGTHGLGQIALKLL 461
>ref|XP_012079207.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
chloroplastic-like [Jatropha curcas]
Length = 584
Score = 192 bits (488), Expect = 2e-46
Identities = 91/152 (59%), Positives = 114/152 (75%)
Frame = -2
Query: 457 YADCNDIETTRVLFDRLPQPNVFACTSIISFYSRNGMFDECIGAYIGMKSKNVLPDGYVF 278
YADC+D+ + LFD+LPQPNVF T+I FY R+GM+++C+ Y MK K VLPD YVF
Sbjct: 2 YADCDDVISAYKLFDKLPQPNVFTWTAIFGFYLRHGMYEKCVQNYGLMKFKGVLPDNYVF 61
Query: 277 PKVLRACTVAMCLETGVQVQKDVIQCGAESNTEVCNCLIDMYSKCGCIESARRVFDSMAG 98
PKVLRAC + L+ G+ + KDVI CG E N +V N LIDMY+KCG + SAR VF+ M
Sbjct: 62 PKVLRACAQLLWLDGGIWIHKDVIVCGFEFNLQVSNSLIDMYTKCGNVRSARLVFEEMRE 121
Query: 97 RDLLSWNTMISGYVYNGILQMAVEILGLMRLD 2
RDLLSWN MISGYV+NG+L +AVE+LG +RLD
Sbjct: 122 RDLLSWNLMISGYVHNGLLDLAVELLGCLRLD 153
Score = 77.4 bits (189), Expect = 7e-12
Identities = 45/151 (29%), Positives = 78/151 (51%), Gaps = 1/151 (0%)
Frame = -2
Query: 469 LILFYADCNDIETTRVLFDRLPQPNVFACTSIISFYSRNGMFDECIGAYIGMKSKNVLPD 290
L+ YA C I+ R +F+ + + +V ++I + + + + GM+ V D
Sbjct: 269 LLTMYAKCGIIQYARFVFELMDKSDVVTWNAMILGFVELQLVQLALECFSGMQRSGVKND 328
Query: 289 GYVFPKVLRACTVAMCLETGVQVQKDVIQCGA-ESNTEVCNCLIDMYSKCGCIESARRVF 113
+L C L+ G Q+ +++ + S V + +I MY K GCI SA VF
Sbjct: 329 QTTISTILPVCG----LKCGKQIHAYILRSSSLNSVVPVWSAMIHMYCKSGCIRSAYSVF 384
Query: 112 DSMAGRDLLSWNTMISGYVYNGILQMAVEIL 20
+MA +D+++WNTMI G+ +G+ Q A+E+L
Sbjct: 385 SNMAVKDIVTWNTMIGGFGMHGLCQAALELL 415
Score = 69.7 bits (169), Expect = 1e-09
Identities = 45/144 (31%), Positives = 76/144 (52%), Gaps = 7/144 (4%)
Frame = -2
Query: 418 FDRLPQPNVFACTSIISFYSRNGMFDECIGAYIGMKSKNVL-PDGYVFPKVLRACTVAMC 242
F ++ QPN+ + T++IS YS+ G + I + M + ++ PD + VL +C
Sbjct: 182 FRQIEQPNIISWTTLISGYSKIGKHEMSIRIFKDMVAGGIVSPDLHSLSSVLVSCRHLCA 241
Query: 241 LETGVQVQKDVIQCGAESNTEVC------NCLIDMYSKCGCIESARRVFDSMAGRDLLSW 80
L G K++ G + T+ L+ MY+KCG I+ AR VF+ M D+++W
Sbjct: 242 LRKG----KEIHGFGIKMETKTAFYGSAGPALLTMYAKCGIIQYARFVFELMDKSDVVTW 297
Query: 79 NTMISGYVYNGILQMAVEILGLMR 8
N MI G+V ++Q+A+E M+
Sbjct: 298 NAMILGFVELQLVQLALECFSGMQ 321
>ref|XP_012573667.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16610-like [Cicer arietinum]
Length = 653
Score = 187 bits (474), Expect = 6e-45
Identities = 92/195 (47%), Positives = 128/195 (65%), Gaps = 2/195 (1%)
Frame = -2
Query: 580 NHLLQLCSNSRSLNPGKQTHKQIIVHGLDH-NPFVTTKLILFYADCNDIETTRVLFDRLP 404
N +LQ CS S++LN KQ H+++I+ + NPF TTKLI Y+DCNDI + L +L
Sbjct: 5 NSVLQACSTSKNLNQAKQLHQRLILFNASNPNPFFTTKLIQIYSDCNDIRSATFLLHQLS 64
Query: 403 QPNVFACTSIISFYSRNGMFDECIGAYIGMKSKN-VLPDGYVFPKVLRACTVAMCLETGV 227
PN+F+ TSI+SF+SR+ + +CI Y ++ N ++PDGYVFPKV +AC ++ GV
Sbjct: 65 HPNIFSFTSILSFHSRHSLHSQCIQTYAQLRRLNGLVPDGYVFPKVFKACALSASFHVGV 124
Query: 226 QVQKDVIQCGAESNTEVCNCLIDMYSKCGCIESARRVFDSMAGRDLLSWNTMISGYVYNG 47
V KDVI G N VCN ++DMYSKCG + SA +VFD M RD+ SWN+M+S YV NG
Sbjct: 125 VVHKDVIVFGWNPNLRVCNSVLDMYSKCGDVGSAVKVFDEMRKRDVFSWNSMMSCYVCNG 184
Query: 46 ILQMAVEILGLMRLD 2
+ + +L M +D
Sbjct: 185 LSDRVLGMLEFMGMD 199
Score = 79.7 bits (195), Expect = 1e-12
Identities = 53/188 (28%), Positives = 87/188 (46%), Gaps = 3/188 (1%)
Frame = -2
Query: 574 LLQLCSNSRSLNPGKQTHKQIIVHGLDHNPFVTTK---LILFYADCNDIETTRVLFDRLP 404
+L C +L G++ H + +G ++ F + L+ YA CN + +F +
Sbjct: 278 ILVSCKFLGNLTSGREIHGYGLKNGFRNDVFYKSAGAALLTLYARCNRLHDAEKVFRVMD 337
Query: 403 QPNVFACTSIISFYSRNGMFDECIGAYIGMKSKNVLPDGYVFPKVLRACTVAMCLETGVQ 224
+V ++I Y G+ + M+ + V D +L C L G Q
Sbjct: 338 DSDVVTWNAMILGYIDTGLGRLAFECFREMQGRGVRIDQTTISTILPVCD----LRCGKQ 393
Query: 223 VQKDVIQCGAESNTEVCNCLIDMYSKCGCIESARRVFDSMAGRDLLSWNTMISGYVYNGI 44
+ V + + V N LI MYS CGCI A +F +M +DL+SWNT+I G+ +G+
Sbjct: 394 IHAYVRKSNFDCAVGVYNALIHMYSICGCISYAYSLFSTMVKKDLISWNTIIGGFGMHGL 453
Query: 43 LQMAVEIL 20
Q AV++L
Sbjct: 454 GQTAVKLL 461