BLASTX nr result
ID: Forsythia22_contig00052940
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00052940
(252 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ERM98365.1| hypothetical protein AMTR_s01499p00009870 [Ambore... 123 5e-30
gb|KJB30917.1| hypothetical protein B456_005G1677001, partial [G... 133 5e-29
gb|KJB23484.1| hypothetical protein B456_004G101400 [Gossypium r... 130 3e-28
ref|XP_002886863.1| hypothetical protein ARALYDRAFT_893971 [Arab... 130 4e-28
ref|YP_009110593.1| RNA polymerase beta' chain (chloroplast) [He... 128 1e-27
gb|ADD31164.1| RNA polymerase beta' subunit protein (chloroplast... 128 1e-27
ref|YP_009002249.1| RNA polymerase beta' subunit (chloroplast) [... 128 1e-27
gb|AGL45327.1| RpoC1 (chloroplast) [Sesamum indicum] 128 1e-27
ref|YP_004935657.1| rpoC1 gene product (chloroplast) [Sesamum in... 128 1e-27
ref|YP_004563995.1| RNA polymerase beta' chain [Olea woodiana su... 128 1e-27
ref|YP_004563772.1| RNA polymerase beta' chain [Olea europaea su... 128 1e-27
ref|YP_004376412.1| RNA polymerase beta' chain [Olea europaea su... 128 1e-27
ref|YP_008964858.1| RNA polymerase beta' subunit (chloroplast) [... 127 3e-27
gb|ADD31179.1| RNA polymerase beta' subunit protein (chloroplast... 126 5e-27
dbj|BAC77550.1| RNA polymerase beta' subunit [Nicotiana sylvestris] 126 5e-27
dbj|BAC77573.1| RNA polymerase beta' subunit [Nicotiana tomentos... 126 5e-27
ref|YP_009041078.1| RNA polymerase beta' subunit [Rhazya stricta... 126 6e-27
gb|ADD31175.1| RNA polymerase beta' subunit protein (chloroplast... 126 6e-27
gb|ADD31165.1| RNA polymerase beta' subunit protein (chloroplast... 126 6e-27
gb|ADD31162.1| RNA polymerase beta' subunit protein (chloroplast... 126 6e-27
>gb|ERM98365.1| hypothetical protein AMTR_s01499p00009870 [Amborella trichopoda]
Length = 351
Score = 123 bits (309), Expect(2) = 5e-30
Identities = 57/64 (89%), Positives = 61/64 (95%)
Frame = +2
Query: 59 IGMNQNFSSMIDRYKHQQLRIGLVSPQQISAWATKILPNEEIVGEVTKPYTFHYKTNKPE 238
+GMNQNFSSMIDRYKHQQLRIGLVSPQQ +AWA KILPN E+VGEVTKPYTFHYK+NKPE
Sbjct: 231 VGMNQNFSSMIDRYKHQQLRIGLVSPQQRTAWANKILPNGEMVGEVTKPYTFHYKSNKPE 290
Query: 239 KDGL 250
KDGL
Sbjct: 291 KDGL 294
Score = 34.3 bits (77), Expect(2) = 5e-30
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +3
Query: 3 LNHFLVSEKNFQINRK 50
L HFLVSEKNFQINRK
Sbjct: 215 LKHFLVSEKNFQINRK 230
>gb|KJB30917.1| hypothetical protein B456_005G1677001, partial [Gossypium
raimondii]
Length = 370
Score = 133 bits (334), Expect = 5e-29
Identities = 64/68 (94%), Positives = 64/68 (94%)
Frame = +2
Query: 47 EGSLIGMNQNFSSMIDRYKHQQLRIGLVSPQQISAWATKILPNEEIVGEVTKPYTFHYKT 226
EGSLIGMNQNFSSMIDRYKHQQLRIG VSPQQISAWA KILPN E VGEVTKPYTFHYKT
Sbjct: 213 EGSLIGMNQNFSSMIDRYKHQQLRIGSVSPQQISAWAKKILPNGETVGEVTKPYTFHYKT 272
Query: 227 NKPEKDGL 250
NKPEKDGL
Sbjct: 273 NKPEKDGL 280
>gb|KJB23484.1| hypothetical protein B456_004G101400 [Gossypium raimondii]
Length = 386
Score = 130 bits (328), Expect = 3e-28
Identities = 63/68 (92%), Positives = 64/68 (94%)
Frame = +2
Query: 47 EGSLIGMNQNFSSMIDRYKHQQLRIGLVSPQQISAWATKILPNEEIVGEVTKPYTFHYKT 226
EGSLIGMNQNFSSMIDRYKHQQLRIG VS QQISAWA KILPN EIVGEVTKPYTFHYKT
Sbjct: 304 EGSLIGMNQNFSSMIDRYKHQQLRIGSVSSQQISAWAKKILPNGEIVGEVTKPYTFHYKT 363
Query: 227 NKPEKDGL 250
NKPE+DGL
Sbjct: 364 NKPERDGL 371
>ref|XP_002886863.1| hypothetical protein ARALYDRAFT_893971 [Arabidopsis lyrata subsp.
lyrata] gi|297332704|gb|EFH63122.1| hypothetical protein
ARALYDRAFT_893971 [Arabidopsis lyrata subsp. lyrata]
Length = 1763
Score = 130 bits (326), Expect = 4e-28
Identities = 62/68 (91%), Positives = 63/68 (92%)
Frame = +2
Query: 47 EGSLIGMNQNFSSMIDRYKHQQLRIGLVSPQQISAWATKILPNEEIVGEVTKPYTFHYKT 226
EGSLIGMN S MIDRYKHQQLRIGLVSPQQISAWATKI+PN EIVGEVTKPYTFHYKT
Sbjct: 1052 EGSLIGMNHKISYMIDRYKHQQLRIGLVSPQQISAWATKIIPNGEIVGEVTKPYTFHYKT 1111
Query: 227 NKPEKDGL 250
NKPEKDGL
Sbjct: 1112 NKPEKDGL 1119
>ref|YP_009110593.1| RNA polymerase beta' chain (chloroplast) [Hesperelaea palmeri]
gi|725798277|emb|CED79753.1| RNA polymerase beta' chain
(chloroplast) [Hesperelaea palmeri]
Length = 690
Score = 128 bits (322), Expect = 1e-27
Identities = 61/62 (98%), Positives = 61/62 (98%)
Frame = +2
Query: 65 MNQNFSSMIDRYKHQQLRIGLVSPQQISAWATKILPNEEIVGEVTKPYTFHYKTNKPEKD 244
MNQNFSSMIDRYKHQQLRIGLVSPQQISAWATKILPN EIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1 MNQNFSSMIDRYKHQQLRIGLVSPQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 245 GL 250
GL
Sbjct: 61 GL 62
>gb|ADD31164.1| RNA polymerase beta' subunit protein (chloroplast) [Ehretia
acuminata]
Length = 687
Score = 128 bits (322), Expect = 1e-27
Identities = 61/62 (98%), Positives = 61/62 (98%)
Frame = +2
Query: 65 MNQNFSSMIDRYKHQQLRIGLVSPQQISAWATKILPNEEIVGEVTKPYTFHYKTNKPEKD 244
MNQNFSSMIDRYKHQQLRIGLVSPQQISAWATKILPN EIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1 MNQNFSSMIDRYKHQQLRIGLVSPQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 245 GL 250
GL
Sbjct: 61 GL 62
>ref|YP_009002249.1| RNA polymerase beta' subunit (chloroplast) [Pinguicula ehlersiae]
gi|575882131|emb|CDL78805.1| RNA polymerase beta'
subunit (chloroplast) [Pinguicula ehlersiae]
Length = 687
Score = 128 bits (322), Expect = 1e-27
Identities = 61/62 (98%), Positives = 61/62 (98%)
Frame = +2
Query: 65 MNQNFSSMIDRYKHQQLRIGLVSPQQISAWATKILPNEEIVGEVTKPYTFHYKTNKPEKD 244
MNQNFSSMIDRYKHQQLRIGLVSPQQISAWATKILPN EIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1 MNQNFSSMIDRYKHQQLRIGLVSPQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 245 GL 250
GL
Sbjct: 61 GL 62
>gb|AGL45327.1| RpoC1 (chloroplast) [Sesamum indicum]
Length = 687
Score = 128 bits (322), Expect = 1e-27
Identities = 61/62 (98%), Positives = 61/62 (98%)
Frame = +2
Query: 65 MNQNFSSMIDRYKHQQLRIGLVSPQQISAWATKILPNEEIVGEVTKPYTFHYKTNKPEKD 244
MNQNFSSMIDRYKHQQLRIGLVSPQQISAWATKILPN EIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1 MNQNFSSMIDRYKHQQLRIGLVSPQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 245 GL 250
GL
Sbjct: 61 GL 62
>ref|YP_004935657.1| rpoC1 gene product (chloroplast) [Sesamum indicum]
gi|347448286|gb|AEO92697.1| RNA polymerase beta' subunit
(chloroplast) [Sesamum indicum]
Length = 691
Score = 128 bits (322), Expect = 1e-27
Identities = 61/62 (98%), Positives = 61/62 (98%)
Frame = +2
Query: 65 MNQNFSSMIDRYKHQQLRIGLVSPQQISAWATKILPNEEIVGEVTKPYTFHYKTNKPEKD 244
MNQNFSSMIDRYKHQQLRIGLVSPQQISAWATKILPN EIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1 MNQNFSSMIDRYKHQQLRIGLVSPQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 245 GL 250
GL
Sbjct: 61 GL 62
>ref|YP_004563995.1| RNA polymerase beta' chain [Olea woodiana subsp. woodiana]
gi|334084650|emb|CBS29341.1| RNA polymerase beta' chain
[Olea woodiana subsp. woodiana]
Length = 690
Score = 128 bits (322), Expect = 1e-27
Identities = 61/62 (98%), Positives = 61/62 (98%)
Frame = +2
Query: 65 MNQNFSSMIDRYKHQQLRIGLVSPQQISAWATKILPNEEIVGEVTKPYTFHYKTNKPEKD 244
MNQNFSSMIDRYKHQQLRIGLVSPQQISAWATKILPN EIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1 MNQNFSSMIDRYKHQQLRIGLVSPQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 245 GL 250
GL
Sbjct: 61 GL 62
>ref|YP_004563772.1| RNA polymerase beta' chain [Olea europaea subsp. cuspidata]
gi|334084392|emb|CBR23820.1| RNA polymerase beta' chain
[Olea europaea subsp. cuspidata]
gi|334084941|emb|CBJ04289.1| RNA polymerase beta' chain
[Olea europaea subsp. cuspidata]
gi|334085027|emb|CBR23729.1| RNA polymerase beta' chain
[Olea europaea subsp. cuspidata]
Length = 690
Score = 128 bits (322), Expect = 1e-27
Identities = 61/62 (98%), Positives = 61/62 (98%)
Frame = +2
Query: 65 MNQNFSSMIDRYKHQQLRIGLVSPQQISAWATKILPNEEIVGEVTKPYTFHYKTNKPEKD 244
MNQNFSSMIDRYKHQQLRIGLVSPQQISAWATKILPN EIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1 MNQNFSSMIDRYKHQQLRIGLVSPQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 245 GL 250
GL
Sbjct: 61 GL 62
>ref|YP_004376412.1| RNA polymerase beta' chain [Olea europaea subsp. europaea]
gi|334701879|ref|YP_004564488.1| RNA polymerase beta'
chain [Olea europaea subsp. maroccana]
gi|328795424|emb|CBR30305.1| RNA polymerase beta' chain
[Olea europaea subsp. europaea]
gi|334084478|emb|CBR24611.1| RNA polymerase beta' chain
[Olea europaea subsp. europaea]
gi|334084564|emb|CBR30397.1| RNA polymerase beta' chain
[Olea europaea subsp. europaea]
gi|334084855|emb|CBS29228.1| RNA polymerase beta' chain
[Olea europaea subsp. maroccana]
gi|510934395|emb|CCQ09093.1| RNA polymerase beta' chain
(chloroplast) [Olea europaea subsp. europaea]
Length = 690
Score = 128 bits (322), Expect = 1e-27
Identities = 61/62 (98%), Positives = 61/62 (98%)
Frame = +2
Query: 65 MNQNFSSMIDRYKHQQLRIGLVSPQQISAWATKILPNEEIVGEVTKPYTFHYKTNKPEKD 244
MNQNFSSMIDRYKHQQLRIGLVSPQQISAWATKILPN EIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1 MNQNFSSMIDRYKHQQLRIGLVSPQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 245 GL 250
GL
Sbjct: 61 GL 62
>ref|YP_008964858.1| RNA polymerase beta' subunit (chloroplast) [Schwalbea americana]
gi|560176691|emb|CDJ38610.1| RNA polymerase beta'
subunit (chloroplast) [Schwalbea americana]
Length = 685
Score = 127 bits (319), Expect = 3e-27
Identities = 60/62 (96%), Positives = 61/62 (98%)
Frame = +2
Query: 65 MNQNFSSMIDRYKHQQLRIGLVSPQQISAWATKILPNEEIVGEVTKPYTFHYKTNKPEKD 244
MNQNFSSMIDRYKHQQLRIGLVSPQQI+AWATKILPN EIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1 MNQNFSSMIDRYKHQQLRIGLVSPQQINAWATKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 245 GL 250
GL
Sbjct: 61 GL 62
>gb|ADD31179.1| RNA polymerase beta' subunit protein (chloroplast) [Heuchera
sanguinea]
Length = 689
Score = 126 bits (317), Expect = 5e-27
Identities = 60/62 (96%), Positives = 60/62 (96%)
Frame = +2
Query: 65 MNQNFSSMIDRYKHQQLRIGLVSPQQISAWATKILPNEEIVGEVTKPYTFHYKTNKPEKD 244
MNQNFSSMIDRYKHQQLRIGLVSPQQISAWA KILPN EIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1 MNQNFSSMIDRYKHQQLRIGLVSPQQISAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 245 GL 250
GL
Sbjct: 61 GL 62
>dbj|BAC77550.1| RNA polymerase beta' subunit [Nicotiana sylvestris]
Length = 150
Score = 126 bits (317), Expect = 5e-27
Identities = 60/62 (96%), Positives = 60/62 (96%)
Frame = +2
Query: 65 MNQNFSSMIDRYKHQQLRIGLVSPQQISAWATKILPNEEIVGEVTKPYTFHYKTNKPEKD 244
MN NFSSMIDRYKHQQLRIGLVSPQQISAWATKILPN EIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1 MNNNFSSMIDRYKHQQLRIGLVSPQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 245 GL 250
GL
Sbjct: 61 GL 62
>dbj|BAC77573.1| RNA polymerase beta' subunit [Nicotiana tomentosiformis]
Length = 149
Score = 126 bits (317), Expect = 5e-27
Identities = 60/62 (96%), Positives = 60/62 (96%)
Frame = +2
Query: 65 MNQNFSSMIDRYKHQQLRIGLVSPQQISAWATKILPNEEIVGEVTKPYTFHYKTNKPEKD 244
MN NFSSMIDRYKHQQLRIGLVSPQQISAWATKILPN EIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1 MNNNFSSMIDRYKHQQLRIGLVSPQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 245 GL 250
GL
Sbjct: 61 GL 62
>ref|YP_009041078.1| RNA polymerase beta' subunit [Rhazya stricta]
gi|645929200|gb|AIB08724.1| RNA polymerase beta' subunit
[Rhazya stricta]
Length = 687
Score = 126 bits (316), Expect = 6e-27
Identities = 60/62 (96%), Positives = 60/62 (96%)
Frame = +2
Query: 65 MNQNFSSMIDRYKHQQLRIGLVSPQQISAWATKILPNEEIVGEVTKPYTFHYKTNKPEKD 244
MNQNFSSMIDRYKHQQLRIG VSPQQISAWATKILPN EIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1 MNQNFSSMIDRYKHQQLRIGSVSPQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 245 GL 250
GL
Sbjct: 61 GL 62
>gb|ADD31175.1| RNA polymerase beta' subunit protein (chloroplast) [Cornus florida]
Length = 688
Score = 126 bits (316), Expect = 6e-27
Identities = 60/62 (96%), Positives = 60/62 (96%)
Frame = +2
Query: 65 MNQNFSSMIDRYKHQQLRIGLVSPQQISAWATKILPNEEIVGEVTKPYTFHYKTNKPEKD 244
MNQNFSSMIDRYKHQQLRIGLVSPQQISAWA KILPN EIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1 MNQNFSSMIDRYKHQQLRIGLVSPQQISAWAKKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 245 GL 250
GL
Sbjct: 61 GL 62
>gb|ADD31165.1| RNA polymerase beta' subunit protein (chloroplast) [Ilex cornuta]
Length = 694
Score = 126 bits (316), Expect = 6e-27
Identities = 60/62 (96%), Positives = 60/62 (96%)
Frame = +2
Query: 65 MNQNFSSMIDRYKHQQLRIGLVSPQQISAWATKILPNEEIVGEVTKPYTFHYKTNKPEKD 244
MNQNFSSMIDRYKHQQLRIG VSPQQISAWATKILPN EIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1 MNQNFSSMIDRYKHQQLRIGSVSPQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 245 GL 250
GL
Sbjct: 61 GL 62
>gb|ADD31162.1| RNA polymerase beta' subunit protein (chloroplast) [Aucuba
japonica]
Length = 687
Score = 126 bits (316), Expect = 6e-27
Identities = 60/62 (96%), Positives = 60/62 (96%)
Frame = +2
Query: 65 MNQNFSSMIDRYKHQQLRIGLVSPQQISAWATKILPNEEIVGEVTKPYTFHYKTNKPEKD 244
MNQNFSSMIDRYKHQQLRIG VSPQQISAWATKILPN EIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1 MNQNFSSMIDRYKHQQLRIGSVSPQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 245 GL 250
GL
Sbjct: 61 GL 62