BLASTX nr result

ID: Forsythia22_contig00052705 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00052705
         (327 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ERN02869.1| hypothetical protein AMTR_s00334p00011530 [Ambore...    52   3e-07
emb|CDP54793.1| Cytochrome b559 alpha chain (PsbE) [Staphylococc...    47   7e-07

>gb|ERN02869.1| hypothetical protein AMTR_s00334p00011530 [Amborella trichopoda]
          Length = 162

 Score = 52.4 bits (124), Expect(3) = 3e-07
 Identities = 26/30 (86%), Positives = 26/30 (86%)
 Frame = -3

Query: 184 PLTVQEYVELSMSGSTGECSFADIITSILY 95
           PLTVQEY EL MSGSTGE SFADIITSI Y
Sbjct: 69  PLTVQEYAELKMSGSTGERSFADIITSIRY 98



 Score = 27.3 bits (59), Expect(3) = 3e-07
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -1

Query: 240 RMQFQ*LPFTDLIFYGIDP 184
           R  F    FTD IFYG+DP
Sbjct: 50  RSDFSEFLFTDFIFYGVDP 68



 Score = 20.4 bits (41), Expect(3) = 3e-07
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -2

Query: 263 GTILTILQGCNFSDCL 216
           GT+LTI Q  +FS+ L
Sbjct: 42  GTLLTISQRSDFSEFL 57


>emb|CDP54793.1| Cytochrome b559 alpha chain (PsbE) [Staphylococcus aureus subsp.
           aureus]
          Length = 166

 Score = 46.6 bits (109), Expect(3) = 7e-07
 Identities = 23/27 (85%), Positives = 24/27 (88%)
 Frame = -3

Query: 175 VQEYVELSMSGSTGECSFADIITSILY 95
           +QEYVEL MSGSTGE SFADIITSI Y
Sbjct: 76  LQEYVELGMSGSTGERSFADIITSIRY 102



 Score = 31.6 bits (70), Expect(3) = 7e-07
 Identities = 14/20 (70%), Positives = 14/20 (70%)
 Frame = -1

Query: 240 RMQFQ*LPFTDLIFYGIDPL 181
           R  F   PFTD IFYGIDPL
Sbjct: 57  RFSFGEFPFTDPIFYGIDPL 76



 Score = 20.8 bits (42), Expect(3) = 7e-07
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 266 FGTILTILQGCNFSD 222
           FGTILTI Q  +F +
Sbjct: 48  FGTILTISQRFSFGE 62


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