BLASTX nr result
ID: Forsythia22_contig00052663
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00052663
(336 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AKB94071.1| ORF V protein [Strawberry vein banding virus] 120 3e-26
emb|CCG14716.1| ORF V protein [Strawberry vein banding virus] 120 3e-26
ref|NP_043933.1| hypothetical protein [Strawberry vein banding v... 114 1e-24
gb|ABX80503.1| RdRp [Carnation etched ring virus] 103 6e-20
gb|ABM97613.1| truncated reverse transcriptase [Dahlia mosaic vi... 102 8e-20
ref|NP_659397.1| hypothetical protein [Mirabilis mosaic virus] g... 102 8e-20
gb|ABX80504.1| RdRp [Carnation etched ring virus] 102 1e-19
ref|YP_004300274.1| replicase [Sweet potato vein clearing virus]... 102 1e-19
ref|YP_006607892.1| reverse transcriptase [Soybean Putnam virus]... 101 2e-19
gb|ABX80508.1| RdRp [Dahlia mosaic virus] 100 3e-19
gb|ABX80507.1| RdRp [Dahlia mosaic virus] 100 3e-19
gb|ABX80505.1| RdRp [Dahlia mosaic virus] 100 3e-19
gb|AEL30041.1| polymerase polyprotein [Dahlia common mosaic virus] 100 3e-19
gb|ABX80509.1| RdRp [Dahlia mosaic virus] 100 4e-19
ref|YP_001931961.1| replicase [Lamium leaf distortion virus] gi|... 100 4e-19
ref|YP_006732334.1| polyprotein [Dahlia mosaic virus] gi|3235119... 100 4e-19
ref|NP_612577.1| Enzymatic polyprotein [Contains: Aspartic prote... 100 6e-19
gb|ABW81763.1| reverse transcriptase [Dahlia mosaic virus-Holland] 99 8e-19
ref|YP_002519387.1| putative enzymatic polyprotein [Rudbeckia fl... 98 1e-18
emb|CAH68829.1| polyprotein [Carnation etched ring virus] 99 1e-18
>gb|AKB94071.1| ORF V protein [Strawberry vein banding virus]
Length = 704
Score = 120 bits (300), Expect(2) = 3e-26
Identities = 62/92 (67%), Positives = 74/92 (80%), Gaps = 1/92 (1%)
Frame = -1
Query: 324 SENSL-EKWSVNKTTAKIVLIEPNVIIRVKPMTYSQEDVKEFDIQIKELLKAKIIRPSKS 148
SE+ L E+ + K A+I L++PN +I+ KPM YS +D +EF QI+ELLK IIRPSKS
Sbjct: 249 SEHPLDERINKGKFEAQITLLDPNKVIKCKPMQYSPQDREEFKTQIEELLKLGIIRPSKS 308
Query: 147 PHSSPAFMVRNHAEIKRNKARMVINYKKLNEN 52
PHSSPAFMVRNHAEIKR KARMVINYKKLN+N
Sbjct: 309 PHSSPAFMVRNHAEIKRGKARMVINYKKLNDN 340
Score = 25.0 bits (53), Expect(2) = 3e-26
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2
Query: 53 TKFDGYYLPNKDILIK 6
TK DGY LPNK+ L++
Sbjct: 341 TKGDGYLLPNKEQLLQ 356
>emb|CCG14716.1| ORF V protein [Strawberry vein banding virus]
Length = 699
Score = 120 bits (300), Expect(2) = 3e-26
Identities = 62/92 (67%), Positives = 74/92 (80%), Gaps = 1/92 (1%)
Frame = -1
Query: 324 SENSL-EKWSVNKTTAKIVLIEPNVIIRVKPMTYSQEDVKEFDIQIKELLKAKIIRPSKS 148
SE+ L E+ + K A+I L++PN +I+ KPM YS +D +EF QI+ELLK IIRPSKS
Sbjct: 244 SEHPLDERINKGKFEAQITLLDPNKVIKCKPMQYSPQDREEFKTQIEELLKLGIIRPSKS 303
Query: 147 PHSSPAFMVRNHAEIKRNKARMVINYKKLNEN 52
PHSSPAFMVRNHAEIKR KARMVINYKKLN+N
Sbjct: 304 PHSSPAFMVRNHAEIKRGKARMVINYKKLNDN 335
Score = 25.0 bits (53), Expect(2) = 3e-26
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2
Query: 53 TKFDGYYLPNKDILIK 6
TK DGY LPNK+ L++
Sbjct: 336 TKGDGYLLPNKEQLLQ 351
>ref|NP_043933.1| hypothetical protein [Strawberry vein banding virus]
gi|1360613|emb|CAA65970.1| ORF V [Strawberry vein
banding virus]
Length = 708
Score = 114 bits (285), Expect(2) = 1e-24
Identities = 60/92 (65%), Positives = 73/92 (79%), Gaps = 1/92 (1%)
Frame = -1
Query: 324 SENSLE-KWSVNKTTAKIVLIEPNVIIRVKPMTYSQEDVKEFDIQIKELLKAKIIRPSKS 148
SE+ L+ + + K A+I L++ N II+ KPM YS +D +EF QI+ELLK IIRPSKS
Sbjct: 253 SEHPLDSRINKGKFEAQIALLDTNKIIKCKPMQYSPQDREEFKTQIEELLKLGIIRPSKS 312
Query: 147 PHSSPAFMVRNHAEIKRNKARMVINYKKLNEN 52
PHSSPAFMVRNHAEIKR KARMVINYKKLN++
Sbjct: 313 PHSSPAFMVRNHAEIKRGKARMVINYKKLNDH 344
Score = 25.0 bits (53), Expect(2) = 1e-24
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2
Query: 53 TKFDGYYLPNKDILIK 6
TK DGY LPNK+ L++
Sbjct: 345 TKGDGYLLPNKEQLLQ 360
>gb|ABX80503.1| RdRp [Carnation etched ring virus]
Length = 393
Score = 103 bits (256), Expect = 6e-20
Identities = 52/91 (57%), Positives = 68/91 (74%), Gaps = 1/91 (1%)
Frame = -1
Query: 324 SENSLE-KWSVNKTTAKIVLIEPNVIIRVKPMTYSQEDVKEFDIQIKELLKAKIIRPSKS 148
SEN ++ + S TA I LI+P I++VKPM+YS D +EFD QIKELL+ K+I+PSKS
Sbjct: 166 SENPIDPEKSKQWMTATIELIDPKTIVKVKPMSYSPSDREEFDKQIKELLELKVIKPSKS 225
Query: 147 PHSSPAFMVRNHAEIKRNKARMVINYKKLNE 55
PH SPAF+V N AE +R K RMV+NYK +N+
Sbjct: 226 PHMSPAFLVENEAERRRGKKRMVVNYKAINK 256
>gb|ABM97613.1| truncated reverse transcriptase [Dahlia mosaic virus]
Length = 244
Score = 102 bits (255), Expect = 8e-20
Identities = 50/77 (64%), Positives = 58/77 (75%)
Frame = -1
Query: 285 TAKIVLIEPNVIIRVKPMTYSQEDVKEFDIQIKELLKAKIIRPSKSPHSSPAFMVRNHAE 106
TA I L +P ++RVKPM YS ED KEF+IQIKELL K+I PSKS H SPAF+V AE
Sbjct: 7 TASIKLADPKSVVRVKPMVYSPEDRKEFEIQIKELLDLKVIEPSKSQHMSPAFLVEKEAE 66
Query: 105 IKRNKARMVINYKKLNE 55
+R K RMV+NYKKLNE
Sbjct: 67 KRRGKKRMVVNYKKLNE 83
>ref|NP_659397.1| hypothetical protein [Mirabilis mosaic virus]
gi|21427196|gb|AAM53128.1| ORFV [Mirabilis mosaic virus]
Length = 674
Score = 102 bits (255), Expect = 8e-20
Identities = 54/91 (59%), Positives = 66/91 (72%), Gaps = 1/91 (1%)
Frame = -1
Query: 324 SENSLE-KWSVNKTTAKIVLIEPNVIIRVKPMTYSQEDVKEFDIQIKELLKAKIIRPSKS 148
SEN ++ + S A+I LI+P ++RVKPM YS ED KEF+IQIKELL K+I PSKS
Sbjct: 214 SENPIDPEKSKGWMKAEIKLIKPETVVRVKPMVYSPEDRKEFEIQIKELLDLKVIIPSKS 273
Query: 147 PHSSPAFMVRNHAEIKRNKARMVINYKKLNE 55
H SPAF+V AE +R K RMV+NYKKLNE
Sbjct: 274 QHMSPAFLVEKEAEKRRGKKRMVVNYKKLNE 304
>gb|ABX80504.1| RdRp [Carnation etched ring virus]
Length = 394
Score = 102 bits (254), Expect = 1e-19
Identities = 52/91 (57%), Positives = 67/91 (73%), Gaps = 1/91 (1%)
Frame = -1
Query: 324 SENSLE-KWSVNKTTAKIVLIEPNVIIRVKPMTYSQEDVKEFDIQIKELLKAKIIRPSKS 148
SEN ++ + S TA I LI+P I++VKPM+YS D +EFD QIKELL K+I+PSKS
Sbjct: 167 SENPIDPEKSKQWMTATIELIDPKTIVKVKPMSYSPSDREEFDKQIKELLDLKVIKPSKS 226
Query: 147 PHSSPAFMVRNHAEIKRNKARMVINYKKLNE 55
PH SPAF+V N AE +R K RMV+NYK +N+
Sbjct: 227 PHMSPAFLVENEAERRRGKKRMVVNYKAMNK 257
>ref|YP_004300274.1| replicase [Sweet potato vein clearing virus]
gi|325698381|gb|ADZ45064.1| replicase [Sweet potato vein
clearing virus]
Length = 619
Score = 102 bits (253), Expect = 1e-19
Identities = 50/93 (53%), Positives = 65/93 (69%)
Frame = -1
Query: 336 KNNFSENSLEKWSVNKTTAKIVLIEPNVIIRVKPMTYSQEDVKEFDIQIKELLKAKIIRP 157
K FSEN LE W ++T KI LI P+ I+ KP+ ++ ED++EF + I ELLK IRP
Sbjct: 162 KTLFSENPLEFWDKHRTEVKIELINPDSIVYQKPLRWNFEDIEEFKLHIDELLKGGFIRP 221
Query: 156 SKSPHSSPAFMVRNHAEIKRNKARMVINYKKLN 58
S S HSSPAF+V H+E KR K+RMVI+Y+ LN
Sbjct: 222 SNSKHSSPAFIVNKHSEQKRGKSRMVIDYRNLN 254
>ref|YP_006607892.1| reverse transcriptase [Soybean Putnam virus]
gi|401620160|gb|AFP95350.1| reverse transcriptase
[Soybean Putnam virus]
Length = 699
Score = 101 bits (251), Expect = 2e-19
Identities = 54/94 (57%), Positives = 66/94 (70%), Gaps = 1/94 (1%)
Frame = -1
Query: 324 SENSLE-KWSVNKTTAKIVLIEPNVIIRVKPMTYSQEDVKEFDIQIKELLKAKIIRPSKS 148
SEN ++ + S TA I L +PN I++VKPM Y+ +D EF QIKELL KII PSKS
Sbjct: 246 SENPIDPEKSKRWMTASIKLKDPNTIVKVKPMQYNPDDRMEFSKQIKELLDLKIIIPSKS 305
Query: 147 PHSSPAFMVRNHAEIKRNKARMVINYKKLNENQI 46
PH SPAF+V N AE +R K RMV+NYKK+NE I
Sbjct: 306 PHQSPAFLVENEAERRRGKKRMVVNYKKINEATI 339
>gb|ABX80508.1| RdRp [Dahlia mosaic virus]
Length = 387
Score = 100 bits (250), Expect = 3e-19
Identities = 49/76 (64%), Positives = 57/76 (75%)
Frame = -1
Query: 282 AKIVLIEPNVIIRVKPMTYSQEDVKEFDIQIKELLKAKIIRPSKSPHSSPAFMVRNHAEI 103
A I L +P ++RVKPM YS ED KEF+IQIKELL K+I PSKS H SPAF+V AE
Sbjct: 175 ASIKLADPKSVVRVKPMVYSPEDRKEFEIQIKELLDLKVIEPSKSQHMSPAFLVEKEAEK 234
Query: 102 KRNKARMVINYKKLNE 55
+R K RMV+NYKKLNE
Sbjct: 235 RRGKKRMVVNYKKLNE 250
>gb|ABX80507.1| RdRp [Dahlia mosaic virus]
Length = 387
Score = 100 bits (250), Expect = 3e-19
Identities = 49/76 (64%), Positives = 57/76 (75%)
Frame = -1
Query: 282 AKIVLIEPNVIIRVKPMTYSQEDVKEFDIQIKELLKAKIIRPSKSPHSSPAFMVRNHAEI 103
A I L +P ++RVKPM YS ED KEF+IQIKELL K+I PSKS H SPAF+V AE
Sbjct: 175 ASIKLADPKSVVRVKPMVYSPEDRKEFEIQIKELLDLKVIEPSKSQHMSPAFLVEKEAEK 234
Query: 102 KRNKARMVINYKKLNE 55
+R K RMV+NYKKLNE
Sbjct: 235 RRGKKRMVVNYKKLNE 250
>gb|ABX80505.1| RdRp [Dahlia mosaic virus]
Length = 387
Score = 100 bits (250), Expect = 3e-19
Identities = 49/76 (64%), Positives = 57/76 (75%)
Frame = -1
Query: 282 AKIVLIEPNVIIRVKPMTYSQEDVKEFDIQIKELLKAKIIRPSKSPHSSPAFMVRNHAEI 103
A I L +P ++RVKPM YS ED KEF+IQIKELL K+I PSKS H SPAF+V AE
Sbjct: 175 ASIKLADPKSVVRVKPMVYSPEDRKEFEIQIKELLDLKVIEPSKSQHMSPAFLVEKEAEK 234
Query: 102 KRNKARMVINYKKLNE 55
+R K RMV+NYKKLNE
Sbjct: 235 RRGKKRMVVNYKKLNE 250
>gb|AEL30041.1| polymerase polyprotein [Dahlia common mosaic virus]
Length = 673
Score = 100 bits (250), Expect = 3e-19
Identities = 49/76 (64%), Positives = 57/76 (75%)
Frame = -1
Query: 282 AKIVLIEPNVIIRVKPMTYSQEDVKEFDIQIKELLKAKIIRPSKSPHSSPAFMVRNHAEI 103
A I L +P ++RVKPM YS ED KEF+IQIKELL K+I PSKS H SPAF+V AE
Sbjct: 231 ASIKLADPKSVVRVKPMVYSPEDRKEFEIQIKELLDLKVIEPSKSQHMSPAFLVEKEAEK 290
Query: 102 KRNKARMVINYKKLNE 55
+R K RMV+NYKKLNE
Sbjct: 291 RRGKKRMVVNYKKLNE 306
>gb|ABX80509.1| RdRp [Dahlia mosaic virus]
Length = 387
Score = 100 bits (249), Expect = 4e-19
Identities = 49/76 (64%), Positives = 57/76 (75%)
Frame = -1
Query: 282 AKIVLIEPNVIIRVKPMTYSQEDVKEFDIQIKELLKAKIIRPSKSPHSSPAFMVRNHAEI 103
A I L +P ++RVKPM YS ED KEF+IQIKELL K+I PSKS H SPAF+V AE
Sbjct: 175 ASIKLADPKSVVRVKPMVYSPEDRKEFEIQIKELLDLKVIXPSKSXHMSPAFLVEKEAEK 234
Query: 102 KRNKARMVINYKKLNE 55
+R K RMV+NYKKLNE
Sbjct: 235 RRGKKRMVVNYKKLNE 250
>ref|YP_001931961.1| replicase [Lamium leaf distortion virus]
gi|172041757|gb|ACB69767.1| replicase [Lamium leaf
distortion virus]
Length = 696
Score = 100 bits (249), Expect = 4e-19
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Frame = -1
Query: 324 SENSLEKWSVNK-TTAKIVLIEPNVIIRVKPMTYSQEDVKEFDIQIKELLKAKIIRPSKS 148
SEN L+ K A I LI+P +++VKPM Y+ +DV+EF QIKELL+ KII PSKS
Sbjct: 239 SENPLDPLKTKKWMKASIKLIDPKTVVKVKPMRYNPQDVEEFAKQIKELLELKIIIPSKS 298
Query: 147 PHSSPAFMVRNHAEIKRNKARMVINYKKLN 58
PH SPAF+V N AE +R K RMV+NYK +N
Sbjct: 299 PHQSPAFLVENEAERRRGKKRMVVNYKAIN 328
>ref|YP_006732334.1| polyprotein [Dahlia mosaic virus] gi|32351193|gb|AAP75615.1|
polyprotein [Dahlia mosaic virus]
gi|404435874|gb|AFR69283.1| polyprotein [Dahlia mosaic
virus]
Length = 609
Score = 100 bits (249), Expect = 4e-19
Identities = 52/91 (57%), Positives = 65/91 (71%), Gaps = 1/91 (1%)
Frame = -1
Query: 324 SENSLE-KWSVNKTTAKIVLIEPNVIIRVKPMTYSQEDVKEFDIQIKELLKAKIIRPSKS 148
SEN ++ + S TA I L +P +++VKPM YS +D KEF+IQIKELL K+I PSKS
Sbjct: 236 SENPIDPQKSKGWMTASIKLADPKSVVKVKPMVYSPQDRKEFEIQIKELLNLKVIIPSKS 295
Query: 147 PHSSPAFMVRNHAEIKRNKARMVINYKKLNE 55
H SPAF+V AE +R K RMV+NYKKLNE
Sbjct: 296 QHMSPAFLVEKEAEKRRGKKRMVVNYKKLNE 326
>ref|NP_612577.1| Enzymatic polyprotein [Contains: Aspartic protease; Endonuclease;
Reverse transcriptase] [Carnation etched ring virus]
gi|130593|sp|P05400.1|POL_CERV RecName: Full=Enzymatic
polyprotein; Includes: RecName: Full=Aspartic protease;
Includes: RecName: Full=Endonuclease; Includes: RecName:
Full=Reverse transcriptase [Carnation etched ring virus]
gi|58863|emb|CAA28360.1| unnamed protein product
[Carnation etched ring virus] gi|225356|prf||1301227E
ORF 5
Length = 659
Score = 99.8 bits (247), Expect = 6e-19
Identities = 50/91 (54%), Positives = 67/91 (73%), Gaps = 1/91 (1%)
Frame = -1
Query: 324 SENSLE-KWSVNKTTAKIVLIEPNVIIRVKPMTYSQEDVKEFDIQIKELLKAKIIRPSKS 148
SEN ++ + S TA I LI+P +++VKPM+YS D +EFD QIKELL+ K+I+PSKS
Sbjct: 203 SENPIDPEKSKQWMTATIELIDPKTVVKVKPMSYSPSDREEFDRQIKELLELKVIKPSKS 262
Query: 147 PHSSPAFMVRNHAEIKRNKARMVINYKKLNE 55
H SPAF+V N AE +R K RMV+NYK +N+
Sbjct: 263 THMSPAFLVENEAERRRGKKRMVVNYKAMNK 293
>gb|ABW81763.1| reverse transcriptase [Dahlia mosaic virus-Holland]
Length = 673
Score = 99.4 bits (246), Expect = 8e-19
Identities = 49/76 (64%), Positives = 56/76 (73%)
Frame = -1
Query: 282 AKIVLIEPNVIIRVKPMTYSQEDVKEFDIQIKELLKAKIIRPSKSPHSSPAFMVRNHAEI 103
A I L +P ++RVKPM YS ED KEF+IQIKELL K+I PSKS H SPAF+V AE
Sbjct: 231 ASIKLADPKSVVRVKPMVYSPEDRKEFEIQIKELLDLKVIEPSKSQHMSPAFLVEKEAEK 290
Query: 102 KRNKARMVINYKKLNE 55
R K RMV+NYKKLNE
Sbjct: 291 GRGKKRMVVNYKKLNE 306
>ref|YP_002519387.1| putative enzymatic polyprotein [Rudbeckia flower distortion virus]
gi|219815610|gb|ACL36982.1| putative enzymatic
polyprotein [Rudbeckia flower distortion virus]
Length = 701
Score = 97.8 bits (242), Expect(2) = 1e-18
Identities = 55/103 (53%), Positives = 69/103 (66%), Gaps = 3/103 (2%)
Frame = -1
Query: 324 SENSL-EKWSVNKTTAKIVLIEPNVIIRVKPMTYSQEDVKEFDIQIKELLKAKIIRPSKS 148
SEN L E + N A+I LI P + VK M YS +D E + QI+ELL+ K+IRPS+S
Sbjct: 246 SENPLDENKNHNGLLAEIKLINPATTVNVKSMAYSPDDAVEINKQIQELLEIKVIRPSRS 305
Query: 147 PHSSPAFMVRNHAEIKRNKARMVINYKKLNENQI--*WILPTK 25
PHSSP F+V+NH EIKR K R+VINYK LN I ++LP K
Sbjct: 306 PHSSPCFLVQNHNEIKRGKKRLVINYKALNAATISDGYLLPNK 348
Score = 21.9 bits (45), Expect(2) = 1e-18
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -2
Query: 44 DGYYLPNKDILI 9
DGY LPNK+ ++
Sbjct: 341 DGYLLPNKETIL 352
>emb|CAH68829.1| polyprotein [Carnation etched ring virus]
Length = 656
Score = 99.0 bits (245), Expect = 1e-18
Identities = 51/91 (56%), Positives = 65/91 (71%), Gaps = 1/91 (1%)
Frame = -1
Query: 324 SENSLE-KWSVNKTTAKIVLIEPNVIIRVKPMTYSQEDVKEFDIQIKELLKAKIIRPSKS 148
SEN ++ + S TA I LI+P I+ VKPM+YS D +EFD QIKE L K+I+PSKS
Sbjct: 202 SENPIDPEKSKQWMTATIELIDPKTIVEVKPMSYSPSDREEFDKQIKEPLDLKVIKPSKS 261
Query: 147 PHSSPAFMVRNHAEIKRNKARMVINYKKLNE 55
PH SPAF+V N AE +R K RMV+NYK +N+
Sbjct: 262 PHMSPAFLVENEAERRRGKKRMVVNYKAMNK 292