BLASTX nr result
ID: Forsythia22_contig00052599
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00052599
(479 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera] 84 3e-18
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera] 84 3e-18
ref|XP_010097937.1| Retrovirus-related Pol polyprotein from tran... 81 5e-18
gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein ... 78 1e-17
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 78 1e-17
gb|ABA96718.1| retrotransposon protein, putative, Ty1-copia subc... 77 2e-17
emb|CAN69199.1| hypothetical protein VITISV_025494 [Vitis vinifera] 77 2e-17
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 78 4e-17
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group] 78 4e-17
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 78 4e-17
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 78 4e-17
gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa... 75 8e-17
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc... 78 1e-16
gb|ABA96191.1| retrotransposon protein, putative, Ty1-copia subc... 75 2e-16
gb|ABA99467.1| retrotransposon protein, putative, Ty1-copia subc... 74 2e-16
dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsi... 84 5e-16
emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa Indica Group] 76 5e-16
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis] 90 7e-16
ref|XP_008213150.1| PREDICTED: retrovirus-related Pol polyprotei... 72 1e-15
gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsi... 88 2e-15
>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
Length = 1643
Score = 83.6 bits (205), Expect(2) = 3e-18
Identities = 36/64 (56%), Positives = 48/64 (75%)
Frame = -1
Query: 479 PQQNGVAEMFNRTIMDKVMCMLIRSSISKGFWGEAACTAVYLIKRSPSSAVNFKTLKEMW 300
PQQNGVAE N+T++ + CM I + +SK FW EA TA YL+ RSPS+A++FKT +E+W
Sbjct: 902 PQQNGVAERMNQTLVQRARCMRIDAGLSKKFWAEAVNTAAYLVNRSPSTAIDFKTPQEVW 961
Query: 299 GGKP 288
GKP
Sbjct: 962 SGKP 965
Score = 34.7 bits (78), Expect(2) = 3e-18
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -3
Query: 294 KTPDLSHLRVFDCAAHTYQSQGKLDARVSKCVML 193
K + S L++F C A+ + S GKL+ R KC+ L
Sbjct: 964 KPSNYSGLKIFGCPAYAHVSDGKLEPRAMKCIFL 997
>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
Length = 1562
Score = 83.6 bits (205), Expect(2) = 3e-18
Identities = 36/64 (56%), Positives = 48/64 (75%)
Frame = -1
Query: 479 PQQNGVAEMFNRTIMDKVMCMLIRSSISKGFWGEAACTAVYLIKRSPSSAVNFKTLKEMW 300
PQQNGVAE N+T++ + CM I + +SK FW EA TA YL+ RSPS+A++FKT +E+W
Sbjct: 689 PQQNGVAERMNQTLVQRARCMRIDAGLSKKFWAEAVNTAAYLVNRSPSTAIDFKTPQEVW 748
Query: 299 GGKP 288
GKP
Sbjct: 749 SGKP 752
Score = 34.7 bits (78), Expect(2) = 3e-18
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -3
Query: 294 KTPDLSHLRVFDCAAHTYQSQGKLDARVSKCVML 193
K + S L++F C A+ + S GKL+ R KC+ L
Sbjct: 751 KPSNYSGLKIFGCPAYAHVSDGKLEPRAMKCIFL 784
>ref|XP_010097937.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
notabilis] gi|587884397|gb|EXB73293.1|
Retrovirus-related Pol polyprotein from transposon TNT
1-94 [Morus notabilis]
Length = 1822
Score = 81.3 bits (199), Expect(2) = 5e-18
Identities = 35/65 (53%), Positives = 48/65 (73%)
Frame = -1
Query: 479 PQQNGVAEMFNRTIMDKVMCMLIRSSISKGFWGEAACTAVYLIKRSPSSAVNFKTLKEMW 300
PQQNG+AE NRT++++V CMLI +S+ K FWGE TA YL+ R P +A++FKT +E+W
Sbjct: 45 PQQNGLAERMNRTLLERVRCMLIEASLPKRFWGEVVNTAAYLVNRCPLAAIDFKTPEEVW 104
Query: 299 GGKPL 285
PL
Sbjct: 105 TDYPL 109
Score = 36.2 bits (82), Expect(2) = 5e-18
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = -3
Query: 285 DLSHLRVFDCAAHTYQSQGKLDARVSKCVML 193
+ +L+VF C A+ +Q +GKLD R KC+ +
Sbjct: 110 NFENLKVFGCTAYAHQKEGKLDPRAKKCMFV 140
>gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein [Oryza sativa Japonica Group]
gi|108708632|gb|ABF96427.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1326
Score = 78.2 bits (191), Expect(2) = 1e-17
Identities = 38/64 (59%), Positives = 44/64 (68%)
Frame = -1
Query: 479 PQQNGVAEMFNRTIMDKVMCMLIRSSISKGFWGEAACTAVYLIKRSPSSAVNFKTLKEMW 300
PQQNGVAE NRTI+ K CML + ++K FW EAA TA YLI RSPS +N KT E+W
Sbjct: 583 PQQNGVAERMNRTIISKARCMLSNARMNKRFWAEAANTACYLINRSPSIPLNKKTPIEVW 642
Query: 299 GGKP 288
G P
Sbjct: 643 SGMP 646
Score = 38.1 bits (87), Expect(2) = 1e-17
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = -3
Query: 285 DLSHLRVFDCAAHTYQSQGKLDARVSKCVML--RNEIEMPKLKNIDESETY*TNKVV 121
D S LRVF C A+ + GKL+ R KC+ L + ++ KL N + ++T+ VV
Sbjct: 648 DYSQLRVFGCTAYAHVDNGKLEPRAIKCLFLGYGSGVKRYKLWNPETNKTFMRRSVV 704
>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53370655|gb|AAU89150.1| integrase core domain
containing protein [Oryza sativa Japonica Group]
gi|108710286|gb|ABF98081.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1322
Score = 78.2 bits (191), Expect(2) = 1e-17
Identities = 38/64 (59%), Positives = 44/64 (68%)
Frame = -1
Query: 479 PQQNGVAEMFNRTIMDKVMCMLIRSSISKGFWGEAACTAVYLIKRSPSSAVNFKTLKEMW 300
PQQNGVAE NRTI+ K CML + ++K FW EAA TA YLI RSPS +N KT E+W
Sbjct: 583 PQQNGVAERMNRTIISKARCMLSNARMNKRFWAEAANTACYLINRSPSIPLNKKTPIEIW 642
Query: 299 GGKP 288
G P
Sbjct: 643 SGMP 646
Score = 37.7 bits (86), Expect(2) = 1e-17
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Frame = -3
Query: 285 DLSHLRVFDCAAHTYQSQGKLDARVSKCVML--RNEIEMPKLKNIDESETY*TNKVV 121
D S LRVF C A+ + GKL+ R KC+ L + ++ KL N + ++T+ + V+
Sbjct: 648 DYSQLRVFGCTAYAHVDNGKLEPRAIKCLFLGYGSGVKGYKLWNPETNKTFMSRNVI 704
>gb|ABA96718.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1131
Score = 77.0 bits (188), Expect(2) = 2e-17
Identities = 37/64 (57%), Positives = 44/64 (68%)
Frame = -1
Query: 479 PQQNGVAEMFNRTIMDKVMCMLIRSSISKGFWGEAACTAVYLIKRSPSSAVNFKTLKEMW 300
PQQNGVAE NRTI+ K CML + ++K FW EAA TA YLI +SPS +N KT E+W
Sbjct: 511 PQQNGVAERMNRTIISKARCMLSNARMNKRFWAEAANTACYLINKSPSIPLNKKTPIEVW 570
Query: 299 GGKP 288
G P
Sbjct: 571 SGMP 574
Score = 38.1 bits (87), Expect(2) = 2e-17
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Frame = -3
Query: 285 DLSHLRVFDCAAHTYQSQGKLDARVSKCVML--RNEIEMPKLKNIDESETY*TNKVV 121
D S LRVF C A+ + GKL+ R KC+ L + ++ KL N + ++T+ + VV
Sbjct: 576 DYSQLRVFGCTAYAHVDNGKLEPRAIKCLFLGYGSGVKGYKLWNPETNKTFMSRSVV 632
>emb|CAN69199.1| hypothetical protein VITISV_025494 [Vitis vinifera]
Length = 540
Score = 77.4 bits (189), Expect(2) = 2e-17
Identities = 33/58 (56%), Positives = 43/58 (74%)
Frame = -1
Query: 461 AEMFNRTIMDKVMCMLIRSSISKGFWGEAACTAVYLIKRSPSSAVNFKTLKEMWGGKP 288
A+ NRT++D V CML S +SK FWGEA T YL+ R+PSSA++ KTL+E+W GKP
Sbjct: 283 AKRMNRTLLDGVRCMLYSSGLSKHFWGEAVMTTCYLVNRTPSSAIDLKTLEELWSGKP 340
Score = 37.7 bits (86), Expect(2) = 2e-17
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -3
Query: 294 KTPDLSHLRVFDCAAHTYQSQGKLDARVSKCVML 193
K + HLR+F C + +QS+GKL R KC+ L
Sbjct: 339 KPSNYDHLRIFGCTTYVHQSEGKLVTRSIKCIFL 372
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 77.8 bits (190), Expect(2) = 4e-17
Identities = 37/64 (57%), Positives = 44/64 (68%)
Frame = -1
Query: 479 PQQNGVAEMFNRTIMDKVMCMLIRSSISKGFWGEAACTAVYLIKRSPSSAVNFKTLKEMW 300
PQQNGVAE NRTI+ + CML + ++K FW EAA TA YLI RSPS +N KT E+W
Sbjct: 582 PQQNGVAERMNRTIISRARCMLSHARMNKRFWAEAASTACYLINRSPSIPLNKKTPIEVW 641
Query: 299 GGKP 288
G P
Sbjct: 642 SGTP 645
Score = 36.6 bits (83), Expect(2) = 4e-17
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = -3
Query: 285 DLSHLRVFDCAAHTYQSQGKLDARVSKCVML--RNEIEMPKLKNIDESETY*TNKVV 121
D S L+VF C A+ + GKL+ R KC+ L + ++ KL N + +T+ + VV
Sbjct: 647 DYSQLKVFGCTAYAHVDNGKLEPRAVKCLFLGYGSGVKGYKLWNPETGKTFMSRSVV 703
>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
Length = 1335
Score = 77.8 bits (190), Expect(2) = 4e-17
Identities = 37/64 (57%), Positives = 44/64 (68%)
Frame = -1
Query: 479 PQQNGVAEMFNRTIMDKVMCMLIRSSISKGFWGEAACTAVYLIKRSPSSAVNFKTLKEMW 300
PQQNGVAE NRTI+ + CML + ++K FW EAA TA YLI RSPS +N KT E+W
Sbjct: 584 PQQNGVAERMNRTIISRARCMLSHARMNKRFWAEAASTACYLINRSPSIPLNKKTPIEVW 643
Query: 299 GGKP 288
G P
Sbjct: 644 SGTP 647
Score = 36.6 bits (83), Expect(2) = 4e-17
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = -3
Query: 285 DLSHLRVFDCAAHTYQSQGKLDARVSKCVML--RNEIEMPKLKNIDESETY*TNKVV 121
D S L+VF C A+ + GKL+ R KC+ L + ++ KL N + +T+ + VV
Sbjct: 649 DYSQLKVFGCTAYAHVDNGKLEPRAVKCLFLGYGSGVKGYKLWNPETGKTFMSRSVV 705
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 77.8 bits (190), Expect(2) = 4e-17
Identities = 37/64 (57%), Positives = 44/64 (68%)
Frame = -1
Query: 479 PQQNGVAEMFNRTIMDKVMCMLIRSSISKGFWGEAACTAVYLIKRSPSSAVNFKTLKEMW 300
PQQNGVAE NRTI+ + CML + ++K FW EAA TA YLI RSPS +N KT E+W
Sbjct: 582 PQQNGVAERMNRTIISRARCMLSHARMNKRFWAEAASTACYLINRSPSIPLNKKTPIEVW 641
Query: 299 GGKP 288
G P
Sbjct: 642 SGTP 645
Score = 36.6 bits (83), Expect(2) = 4e-17
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = -3
Query: 285 DLSHLRVFDCAAHTYQSQGKLDARVSKCVML--RNEIEMPKLKNIDESETY*TNKVV 121
D S L+VF C A+ + GKL+ R KC+ L + ++ KL N + +T+ + VV
Sbjct: 647 DYSQLKVFGCTAYAHVDNGKLEPRAVKCLFLGYGSGVKGYKLWNPETGKTFMSRSVV 703
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 77.8 bits (190), Expect(2) = 4e-17
Identities = 37/64 (57%), Positives = 44/64 (68%)
Frame = -1
Query: 479 PQQNGVAEMFNRTIMDKVMCMLIRSSISKGFWGEAACTAVYLIKRSPSSAVNFKTLKEMW 300
PQQNGVAE NRTI+ + CML + ++K FW EAA TA YLI RSPS +N KT E+W
Sbjct: 582 PQQNGVAERMNRTIISRARCMLSHARMNKRFWAEAASTACYLINRSPSIPLNKKTPIEVW 641
Query: 299 GGKP 288
G P
Sbjct: 642 SGMP 645
Score = 36.6 bits (83), Expect(2) = 4e-17
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = -3
Query: 285 DLSHLRVFDCAAHTYQSQGKLDARVSKCVML--RNEIEMPKLKNIDESETY*TNKVV 121
D S L+VF C A+ + GKL+ R KC+ L + ++ KL N + +T+ + VV
Sbjct: 647 DYSQLKVFGCTAYAHVDNGKLEPRAVKCLFLGYGSGVKGYKLWNPETGKTFMSRSVV 703
>gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa Japonica Group]
gi|18542925|gb|AAL75759.1| Putative pol polyprotein
[Oryza sativa Japonica Group] gi|31429763|gb|AAP51772.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1005
Score = 75.5 bits (184), Expect(2) = 8e-17
Identities = 37/62 (59%), Positives = 43/62 (69%)
Frame = -1
Query: 479 PQQNGVAEMFNRTIMDKVMCMLIRSSISKGFWGEAACTAVYLIKRSPSSAVNFKTLKEMW 300
PQQNGVAE NRTI+ K CML + ++K FW EAA TA YLI RSPS +N KT E+W
Sbjct: 320 PQQNGVAERMNRTIISKAHCMLSNARMNKRFWAEAANTACYLINRSPSIPLNKKTPIEVW 379
Query: 299 GG 294
G
Sbjct: 380 SG 381
Score = 37.7 bits (86), Expect(2) = 8e-17
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Frame = -3
Query: 285 DLSHLRVFDCAAHTYQSQGKLDARVSKCVML--RNEIEMPKLKNIDESETY*TNKVV 121
D S LRVF C A+ + GKL+ R KC+ L + ++ KL N + ++T+ + V+
Sbjct: 385 DYSQLRVFGCTAYAHVDNGKLEPRAIKCLFLGYGSGVKGYKLWNPETNKTFMSRSVI 441
>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1278
Score = 78.2 bits (191), Expect(2) = 1e-16
Identities = 38/64 (59%), Positives = 44/64 (68%)
Frame = -1
Query: 479 PQQNGVAEMFNRTIMDKVMCMLIRSSISKGFWGEAACTAVYLIKRSPSSAVNFKTLKEMW 300
PQQNGVAE NRTI+ K CML + ++K FW EAA TA YLI RSPS +N KT E+W
Sbjct: 583 PQQNGVAERMNRTIISKARCMLSNARMNKRFWAEAANTACYLINRSPSIPLNKKTPIEIW 642
Query: 299 GGKP 288
G P
Sbjct: 643 SGMP 646
Score = 34.7 bits (78), Expect(2) = 1e-16
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = -3
Query: 285 DLSHLRVFDCAAHTYQSQGKLDARVSKCVMLRNEIEMP--KLKNIDESETY*TNKVV 121
D S LRVF C A+ + KL+ R KC+ L + + KL N + ++T+ + VV
Sbjct: 648 DYSQLRVFGCTAYAHVDNEKLEPRAIKCLFLGYGLGVKGYKLWNPETNKTFMSRSVV 704
>gb|ABA96191.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1156
Score = 74.7 bits (182), Expect(2) = 2e-16
Identities = 36/64 (56%), Positives = 42/64 (65%)
Frame = -1
Query: 479 PQQNGVAEMFNRTIMDKVMCMLIRSSISKGFWGEAACTAVYLIKRSPSSAVNFKTLKEMW 300
PQQNGVAE NRTI+ CML + ++K FW E A TA YLI RSPS +N KT E+W
Sbjct: 523 PQQNGVAERMNRTIISNTRCMLSNARMNKRFWAEVANTACYLINRSPSIPLNKKTPIEVW 582
Query: 299 GGKP 288
G P
Sbjct: 583 SGMP 586
Score = 37.0 bits (84), Expect(2) = 2e-16
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = -3
Query: 285 DLSHLRVFDCAAHTYQSQGKLDARVSKCVML--RNEIEMPKLKNIDESETY*TNKVV 121
D S LRVF C A+ + GKL+ R KC+ L + ++ KL N ++T+ + VV
Sbjct: 588 DYSQLRVFGCTAYAHVDNGKLEPRAIKCLFLGYGSGVKGYKLWNPKTNKTFMSRSVV 644
>gb|ABA99467.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1136
Score = 73.9 bits (180), Expect(2) = 2e-16
Identities = 35/64 (54%), Positives = 44/64 (68%)
Frame = -1
Query: 479 PQQNGVAEMFNRTIMDKVMCMLIRSSISKGFWGEAACTAVYLIKRSPSSAVNFKTLKEMW 300
PQQNGVA+ NRTI+ + C+L + ++K FW EAA TA YLI RSPS +N KT E+W
Sbjct: 375 PQQNGVAKRMNRTIISEARCLLSNARMNKRFWAEAANTACYLINRSPSIPLNKKTPIEVW 434
Query: 299 GGKP 288
G P
Sbjct: 435 SGMP 438
Score = 37.7 bits (86), Expect(2) = 2e-16
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = -3
Query: 285 DLSHLRVFDCAAHTYQSQGKLDARVSKCVMLR--NEIEMPKLKNIDESETY*TNKVV 121
D S LRVF C A+ + GKL+ R KC+ L + ++ KL N ++T+ + VV
Sbjct: 440 DYSQLRVFGCTAYAHVDNGKLEPRAIKCLFLSYGSGVKGYKLWNPQTNKTFMSRSVV 496
>dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsis thaliana]
Length = 1342
Score = 83.6 bits (205), Expect(2) = 5e-16
Identities = 39/64 (60%), Positives = 46/64 (71%)
Frame = -1
Query: 479 PQQNGVAEMFNRTIMDKVMCMLIRSSISKGFWGEAACTAVYLIKRSPSSAVNFKTLKEMW 300
PQQNGVAE NRTIM+KV CML S + K FW EAA TAV+LI +SPSS++ F +E W
Sbjct: 583 PQQNGVAERMNRTIMNKVRCMLSESGLGKQFWAEAASTAVFLINKSPSSSIEFDIPEEKW 642
Query: 299 GGKP 288
G P
Sbjct: 643 TGHP 646
Score = 26.9 bits (58), Expect(2) = 5e-16
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -3
Query: 288 PDLSHLRVFDCAAHTYQSQGKLDARVSKCVML 193
PD L+ F A+ + QGKL+ R K + L
Sbjct: 647 PDYKILKKFGSVAYIHSDQGKLNPRAKKGIFL 678
>emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa Indica Group]
Length = 1009
Score = 76.3 bits (186), Expect(2) = 5e-16
Identities = 36/64 (56%), Positives = 42/64 (65%)
Frame = -1
Query: 479 PQQNGVAEMFNRTIMDKVMCMLIRSSISKGFWGEAACTAVYLIKRSPSSAVNFKTLKEMW 300
PQQNGVAE NRTI+ K CML + + K FW EA TA YLI RSPS A++ KT E+W
Sbjct: 411 PQQNGVAERMNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVW 470
Query: 299 GGKP 288
P
Sbjct: 471 SSSP 474
Score = 34.3 bits (77), Expect(2) = 5e-16
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -3
Query: 279 SHLRVFDCAAHTYQSQGKLDARVSKCVML 193
S LRVF C A+ + GKL+ R KC+ L
Sbjct: 478 SDLRVFSCTAYAHVDNGKLEPRAIKCIFL 506
>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
Length = 1334
Score = 89.7 bits (221), Expect = 7e-16
Identities = 39/64 (60%), Positives = 48/64 (75%)
Frame = -1
Query: 479 PQQNGVAEMFNRTIMDKVMCMLIRSSISKGFWGEAACTAVYLIKRSPSSAVNFKTLKEMW 300
PQQNG+AE NRT++DK CMLI S + + FW EA TA YL+ RSPSSA+ FKT +E+W
Sbjct: 580 PQQNGLAERMNRTLVDKTRCMLINSKLPRSFWAEAVNTASYLVNRSPSSAIGFKTPEELW 639
Query: 299 GGKP 288
GKP
Sbjct: 640 NGKP 643
>ref|XP_008213150.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 [Nasonia vitripennis]
Length = 1015
Score = 72.0 bits (175), Expect(2) = 1e-15
Identities = 29/63 (46%), Positives = 41/63 (65%)
Frame = -1
Query: 479 PQQNGVAEMFNRTIMDKVMCMLIRSSISKGFWGEAACTAVYLIKRSPSSAVNFKTLKEMW 300
PQQNG AE NRT++DK CM++ + ++K FW EA A Y+ R+P +KT +E+W
Sbjct: 589 PQQNGRAERLNRTLLDKARCMILDAGVAKSFWAEAVAVAAYVHNRTPKRCTKYKTPQELW 648
Query: 299 GGK 291
GK
Sbjct: 649 TGK 651
Score = 37.0 bits (84), Expect(2) = 1e-15
Identities = 17/37 (45%), Positives = 27/37 (72%), Gaps = 3/37 (8%)
Frame = -3
Query: 294 KTPDLSHLRVFDCAA--HTYQS-QGKLDARVSKCVML 193
K PDLSH++VF C A H +S +GK+DA+ ++C+ +
Sbjct: 651 KIPDLSHIKVFGCKAIVHVPESKRGKMDAKGTRCIFI 687
>gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1335
Score = 88.2 bits (217), Expect = 2e-15
Identities = 46/80 (57%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Frame = -1
Query: 479 PQQNGVAEMFNRTIMDKVMCMLIRSSISKGFWGEAACTAVYLIKRSPSSAVNFKTLKEMW 300
PQQNG+AE NRTIMDKV ML RS + K FW EAA TAVYLI RSPS+A+NF +E W
Sbjct: 572 PQQNGIAERLNRTIMDKVRSMLSRSGMEKKFWAEAASTAVYLINRSPSTAINFDLPEEKW 631
Query: 299 -GGKPLTSPI*EFLIVLHIH 243
G P S + +F + +IH
Sbjct: 632 TGALPDLSSLRKFGCLAYIH 651